Citrus Sinensis ID: 031436

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------16
Protein Sequence
MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWKPAVIT
Secondary Structure (PSIPRED)
ccEEEEEcccccEEEEEEEcccccHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccHHHHccccccccccccccccHHHHHHHccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEEccccEEEEEEEcccccHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEcccHHHEEEccccccHHHHccccEcccccccEEEEEEEcccccccHHHHccccccccccEEEEcHEEEHHHHccccccccccccccccc
Coil and Loop (DISEMBL)
mrligccletenpvLVFEYVEygtladriyhprqpnfepvtcSLRLKIAMEIAYGIAYLHVAFsrpivfrnvkpsnilfqEQSVAKLFdfsysesipegetrirgrvmgtfgylppeyiatgdcnekcdvysfdgsrdsghltgrawyrsedwkpavit
Flexible Loop (DISEMBL)
mrligccletenpvLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDfsysesipegetrirgrVMGTFGYLPPEYIATGDCNEKCDVYSFdgsrdsghltgrawyrsedwkpavit
Low Complexity Region (SEG)
MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWKPAVIT
Disordered region (IsUnstruct)
**LIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW******
Disordered Region (DISOPRED)
MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAW************
Disordered Region (DISEMBL)
MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWKPAVIT
Disordered Region (DISPRO)
MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRA*************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWKPAVIT
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	159	2.2.26 [Sep-21-2011]
Q8GXQ3	642	Wall-associated receptor	yes	no	0.836	0.207	0.458	2e-27
Q9LMN7	733	Wall-associated receptor	no	no	0.823	0.178	0.473	8e-27
Q9LMN8	741	Wall-associated receptor	no	no	0.817	0.175	0.470	8e-27
Q8RY17	751	Wall-associated receptor	no	no	0.823	0.174	0.466	1e-26
Q39191	735	Wall-associated receptor	no	no	0.823	0.178	0.466	1e-26
Q9LMN6	738	Wall-associated receptor	no	no	0.823	0.177	0.466	2e-26
Q7X8C5	748	Wall-associated receptor	no	no	0.823	0.175	0.466	3e-26
Q8H186	389	Probable receptor-like pr	no	no	0.817	0.334	0.426	4e-26
Q9LMP1	732	Wall-associated receptor	no	no	0.823	0.178	0.451	7e-26
Q9LSV3	433	Putative wall-associated	no	no	0.823	0.302	0.451	1e-25

>sp|Q8GXQ3|WAKLF_ARATH Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=2

 Score =  121 bits (303), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 61/133 (45%), Positives = 86/133 (64%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+GCCLETE PVLV+EY+  G L  R++   + N   +T  +RL+IA+EIA  ++Y+H
Sbjct: 489 VKLLGCCLETEVPVLVYEYIPNGDLFKRLHEKSESNDYTMTWEVRLRIAIEIAGALSYMH 548

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
            A S PI  R++K +NIL  E+  AK+ DF  S SI   +T +   V GTFGY+ PEY  
Sbjct: 549 SAASIPIYHRDIKTTNILLDEKYRAKVSDFGTSRSITIAQTHLTTLVAGTFGYMDPEYFL 608

Query: 121 TGDCNEKCDVYSF 133
           +    +K DVYSF
Sbjct: 609 SSQYTDKSDVYSF 621

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -

>sp|Q9LMN7|WAK5_ARATH Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1

 Score =  119 bits (298), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 63/133 (47%), Positives = 85/133 (63%), Gaps = 2/133 (1%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+GCCLETE P+LV+E++  GTL D ++     +   +T   RL+IA+E+A  +AYLH
Sbjct: 465 VKLLGCCLETEVPLLVYEFISSGTLFDHLHGSMFDS--SLTWEHRLRIAIEVAGTLAYLH 522

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S PI+ R+VK +NIL  E   AK+ DF  S  IP  + ++   V GT GYL PEY  
Sbjct: 523 SYASIPIIHRDVKTANILLDENLTAKVADFGASRLIPMDQEQLTTMVQGTLGYLDPEYYN 582

Query: 121 TGDCNEKCDVYSF 133
           TG  NEK DVYSF
Sbjct: 583 TGLLNEKSDVYSF 595

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Binding to pectin may have significance in the control of cell expansion, morphogenesis and development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LMN8|WAK3_ARATH Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2

 Score =  119 bits (298), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 63/134 (47%), Positives = 87/134 (64%), Gaps = 4/134 (2%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEP-VTCSLRLKIAMEIAYGIAYL 59
           ++++GCCLETE P+LV+E++  GTL D   H     F+  +T   RL+IA+E+A  +AYL
Sbjct: 472 VKILGCCLETEVPLLVYEFITNGTLFD---HLHGSIFDSSLTWEHRLRIAIEVAGTLAYL 528

Query: 60  HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
           H + S PI+ R++K +NIL  E   AK+ DF  S+ IP  + ++   V GT GYL PEY 
Sbjct: 529 HSSASIPIIHRDIKTANILLDENLTAKVADFGASKLIPMDKEQLTTMVQGTLGYLDPEYY 588

Query: 120 ATGDCNEKCDVYSF 133
            TG  NEK DVYSF
Sbjct: 589 TTGLLNEKSDVYSF 602

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Binding to pectin may have significance in the control of cell expansion, morphogenesis and development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8RY17|WAKLI_ARATH Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1

 Score =  119 bits (297), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/133 (46%), Positives = 86/133 (64%), Gaps = 2/133 (1%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+GCCLETE P+LV+E++  G L  R++H    +   +T  +RL+I++EIA  +AYLH
Sbjct: 478 VKLMGCCLETEVPILVYEHIPNGDLFKRLHH--DSDDYTMTWDVRLRISVEIAGALAYLH 535

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
            A S P+  R+VK +NIL  E+  AK+ DF  S SI   +T +   V GTFGYL PEY  
Sbjct: 536 SAASTPVYHRDVKTTNILLDEKYRAKVSDFGTSRSINVDQTHLTTLVAGTFGYLDPEYFQ 595

Query: 121 TGDCNEKCDVYSF 133
           T    +K DVYSF
Sbjct: 596 TSQFTDKSDVYSF 608

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Required during plant's response to pathogen infection.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q39191|WAK1_ARATH Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2

 Score =  118 bits (296), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/133 (46%), Positives = 84/133 (63%), Gaps = 2/133 (1%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+GCCLETE P+LV+E++  GTL D ++     +   +T   RLKIA+E+A  +AYLH
Sbjct: 466 VKLLGCCLETEVPLLVYEFITNGTLFDHLHGSMIDS--SLTWEHRLKIAIEVAGTLAYLH 523

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
            + S PI+ R++K +NIL      AK+ DF  S  IP  +  +   V GT GYL PEY  
Sbjct: 524 SSASIPIIHRDIKTANILLDVNLTAKVADFGASRLIPMDKEELETMVQGTLGYLDPEYYN 583

Query: 121 TGDCNEKCDVYSF 133
           TG  NEK DVYSF
Sbjct: 584 TGLLNEKSDVYSF 596

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Binding to pectin may have significance in the control of cell expansion, morphogenesis and development. Required during plant's response to pathogen infection and in plant defense against heavy metal toxicity. Phosphorylates the oxygen-evolving enhancer protein 2 (OEE2) in an GRP-3-dependent manner.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LMN6|WAK4_ARATH Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1

 Score =  118 bits (295), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/133 (46%), Positives = 85/133 (63%), Gaps = 2/133 (1%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+GCCLETE P+LV+E++  GTL D ++     +   +T   RL++A+EIA  +AYLH
Sbjct: 467 VKLLGCCLETEVPLLVYEFISSGTLFDHLHGSMFDS--SLTWEHRLRMAVEIAGTLAYLH 524

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
            + S PI+ R++K +NIL  E   AK+ DF  S  IP  +  +   V GT GYL PEY  
Sbjct: 525 SSASIPIIHRDIKTANILLDENLTAKVADFGASRLIPMDKEDLATMVQGTLGYLDPEYYN 584

Query: 121 TGDCNEKCDVYSF 133
           TG  NEK DVYSF
Sbjct: 585 TGLLNEKSDVYSF 597

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Binding to pectin may have significance in the control of cell expansion, morphogenesis and development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q7X8C5|WAKLB_ARATH Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1

 Score =  117 bits (292), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/133 (46%), Positives = 87/133 (65%), Gaps = 2/133 (1%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+GCCLETE PVLV+E+V  G L  R+ H    ++  +T  +RL IA+EIA  ++YLH
Sbjct: 473 VKLLGCCLETEVPVLVYEFVPNGDLCKRL-HDESDDYT-MTWEVRLHIAIEIAGALSYLH 530

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
            A S PI  R++K +NIL  E++ AK+ DF  S S+   +T +  +V GTFGY+ PEY  
Sbjct: 531 SAASFPIYHRDIKTTNILLDERNRAKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQ 590

Query: 121 TGDCNEKCDVYSF 133
           +    EK DVYSF
Sbjct: 591 SSKFTEKSDVYSF 603

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8H186|Y3545_ARATH Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1

 Score =  117 bits (292), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 58/136 (42%), Positives = 89/136 (65%), Gaps = 6/136 (4%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++LIG CLE E  +LV+E++  G+L + ++     +F+P++  LR+K+A++ A G+A+LH
Sbjct: 128 VKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLH 187

Query: 61  VAFSRP--IVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYLPPE 117
              S P  +++R++K SNIL      AKL DF  +   P GE + +  RVMGTFGY  PE
Sbjct: 188 ---SDPVKVIYRDIKASNILLDSDFNAKLSDFGLARDGPMGEQSYVSTRVMGTFGYAAPE 244

Query: 118 YIATGDCNEKCDVYSF 133
           Y++TG  N + DVYSF
Sbjct: 245 YVSTGHLNARSDVYSF 260

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LMP1|WAK2_ARATH Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1

 Score =  116 bits (290), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 60/133 (45%), Positives = 85/133 (63%), Gaps = 2/133 (1%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++++GCCLETE P+LV+E++  GTL D ++     +   +T   RL+IA E+A  +AYLH
Sbjct: 461 VKVLGCCLETEVPLLVYEFINSGTLFDHLHGSLYDS--SLTWEHRLRIATEVAGSLAYLH 518

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
            + S PI+ R++K +NIL  +   AK+ DF  S  IP  + ++   V GT GYL PEY  
Sbjct: 519 SSASIPIIHRDIKTANILLDKNLTAKVADFGASRLIPMDKEQLTTIVQGTLGYLDPEYYN 578

Query: 121 TGDCNEKCDVYSF 133
           TG  NEK DVYSF
Sbjct: 579 TGLLNEKSDVYSF 591

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Binding to pectin may have significance in the control of cell expansion, morphogenesis and development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LSV3|WAKLS_ARATH Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1

 Score =  115 bits (288), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/133 (45%), Positives = 83/133 (62%), Gaps = 2/133 (1%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+GCCLETE P+LV+E++  G+L D ++     +   +T   RL+IA+E+A  IAYLH
Sbjct: 165 VKLLGCCLETEVPLLVYEFITGGSLFDHLHGSMFVS--SLTWEHRLEIAIEVAGAIAYLH 222

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S PI+ R++K  NIL  E   AK+ DF  S+  P  + ++   V GT GYL PEY  
Sbjct: 223 SGASIPIIHRDIKTENILLDENLTAKVADFGASKLKPMDKEQLTTMVQGTLGYLDPEYYT 282

Query: 121 TGDCNEKCDVYSF 133
           T   NEK DVYSF
Sbjct: 283 TWLLNEKSDVYSF 295

Putative serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	159
255582635	331	receptor protein kinase, putative [Ricin	0.836	0.401	0.556	6e-36
255542662	330	serine-threonine protein kinase, plant-t	0.836	0.403	0.556	7e-34
224123144	344	predicted protein [Populus trichocarpa]	0.836	0.386	0.511	2e-32
255542676	247	serine-threonine protein kinase, plant-t	0.805	0.518	0.548	6e-31
224083492	666	predicted protein [Populus trichocarpa]	0.924	0.220	0.5	6e-31
255542658	356	serine-threonine protein kinase, plant-t	0.836	0.373	0.526	1e-30
147770821	724	hypothetical protein VITISV_023562 [Viti	0.937	0.205	0.496	1e-29
225459920	736	PREDICTED: wall-associated receptor kina	0.937	0.202	0.496	2e-29
255545828	694	kinase, putative [Ricinus communis] gi|2	0.823	0.188	0.511	9e-29
242073744	576	hypothetical protein SORBIDRAFT_06g02299	0.836	0.230	0.496	1e-28

>gi|255582635|ref|XP_002532098.1| receptor protein kinase, putative [Ricinus communis] gi|223528232|gb|EEF30288.1| receptor protein kinase, putative [Ricinus communis]

 Score =  155 bits (392), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 74/133 (55%), Positives = 96/133 (72%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+GCCLET+ PVLVFE +EYGTLA R+Y P +  ++P+    RLKIA+EIA  ++YLH
Sbjct: 105 LKLLGCCLETQIPVLVFEPIEYGTLAGRLYGPNKTLYQPLLWRHRLKIAVEIANAVSYLH 164

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
            AFSRPIVFRN+KP NI   E  VAKL DFS + SIPEGE+ ++  + G +G + PEY  
Sbjct: 165 TAFSRPIVFRNIKPLNIFLDECHVAKLSDFSLAVSIPEGESHVKDMLAGAWGLIAPEYAK 224

Query: 121 TGDCNEKCDVYSF 133
           T   NE  DVY+F
Sbjct: 225 TSCFNESQDVYNF 237

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542662|ref|XP_002512394.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548355|gb|EEF49846.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  148 bits (374), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 74/133 (55%), Positives = 91/133 (68%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+GCCLET +P+LVFE  +  TLADRI      +FEPV   LRLKI  +IA  + Y+H
Sbjct: 99  IKLLGCCLETPSPILVFESAKEKTLADRIIDRNDDHFEPVKWKLRLKIVADIANVVVYIH 158

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
            AF RPIV RN+K SNIL  E  VAKL DFS   SIPEG++R+R  + GT G +  E +A
Sbjct: 159 TAFPRPIVHRNIKASNILLDEDYVAKLSDFSLCVSIPEGKSRVRDIMAGTMGLIASESLA 218

Query: 121 TGDCNEKCDVYSF 133
           TG  NEK DVYSF
Sbjct: 219 TGYFNEKSDVYSF 231

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224123144|ref|XP_002319005.1| predicted protein [Populus trichocarpa] gi|222857381|gb|EEE94928.1| predicted protein [Populus trichocarpa]

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 68/133 (51%), Positives = 92/133 (69%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           M+L+GCCLE   P+LVFEYV   TL+D ++   +   +P+    R KIAM++A  +A+LH
Sbjct: 112 MKLLGCCLEARIPILVFEYVGDWTLSDFLWGSEEARCQPLLWIPRSKIAMDMANAVAFLH 171

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
            AFS+PIVFRN+KP NIL  +   AKL DFS S SIP+GE+ +R  V G  G + PEY+ 
Sbjct: 172 AAFSKPIVFRNIKPLNILLDDNHEAKLSDFSISISIPKGESHVRDSVAGATGLIAPEYLT 231

Query: 121 TGDCNEKCDVYSF 133
           TG+ NEK DV++F
Sbjct: 232 TGNFNEKQDVFNF 244

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542676|ref|XP_002512401.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548362|gb|EEF49853.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  138 bits (348), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 73/133 (54%), Positives = 88/133 (66%), Gaps = 5/133 (3%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+GCCLE+E P+LVFEY E G L D IY     +F       RLKIA++ A  IAYLH
Sbjct: 101 LKLLGCCLESEIPILVFEYAEKGNLHDYIYKTDSASFRR-----RLKIAVDAANVIAYLH 155

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
            AF RP+V R++  SN+   E SVAK+ DFS S SIPEGET I   VMGT GY  PEY  
Sbjct: 156 TAFPRPVVHRHITLSNVWLDEDSVAKVTDFSLSMSIPEGETHIEDFVMGTCGYAAPEYAR 215

Query: 121 TGDCNEKCDVYSF 133
           +G  NEK DV+SF
Sbjct: 216 SGIFNEKIDVFSF 228

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224083492|ref|XP_002307049.1| predicted protein [Populus trichocarpa] gi|222856498|gb|EEE94045.1| predicted protein [Populus trichocarpa]

 Score =  138 bits (348), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 74/148 (50%), Positives = 99/148 (66%), Gaps = 1/148 (0%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RLIGCCLET  P+LV+E V+ G ++++I+   + + +P+T   RLKIA EIA+ ++YLH
Sbjct: 108 LRLIGCCLETPVPLLVYESVKRGNVSEQIHVTGEFHSQPMTWKCRLKIAREIAHAVSYLH 167

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
            AFSRPIV R + P NI   + +VAKL +FS S  I E E     R++GT GYLPPEY+ 
Sbjct: 168 TAFSRPIVHRGINPLNIFLDDYNVAKLSNFSQSLYICEDEIIKTDRIIGTLGYLPPEYLE 227

Query: 121 TGDCNEKCDVYSFDGSRDSGHLTGRAWY 148
            G+  EK DVYSF G+     LTGR  Y
Sbjct: 228 HGEITEKFDVYSF-GTLLLELLTGRRPY 254

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542658|ref|XP_002512392.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548353|gb|EEF49844.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  137 bits (346), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/133 (52%), Positives = 88/133 (66%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+GCCLE+E P+LVFEY E G L D IY     +F P+    RLKIA++ A  IAYLH
Sbjct: 109 LKLLGCCLESEIPILVFEYAEKGKLQDYIYKTDSASFRPLLWKSRLKIAVDAANVIAYLH 168

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
            A  RP+V R++  SNI   E  VAK+ DF+ S SI EGET I   V+GT GY  PEY+ 
Sbjct: 169 TACPRPVVHRDITLSNIWLDEDYVAKVTDFTVSMSILEGETHIEDFVLGTCGYAAPEYVR 228

Query: 121 TGDCNEKCDVYSF 133
           +G  NEK DV+SF
Sbjct: 229 SGIFNEKIDVFSF 241

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147770821|emb|CAN76425.1| hypothetical protein VITISV_023562 [Vitis vinifera]

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/155 (49%), Positives = 97/155 (62%), Gaps = 6/155 (3%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+GCCLETE P+LV+EYV  GTL+D I+   Q    P+  + R +IA E+A  IAY+H
Sbjct: 446 VKLLGCCLETEVPLLVYEYVSNGTLSDHIH--AQLEEAPMKWADRFRIAKEVAGAIAYMH 503

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
            A + PI  R+VK SNIL  E+  AKL DF  S S+P G+T +   V GTFGYL PEY  
Sbjct: 504 SAAAVPIYHRDVKSSNILLDEKYRAKLSDFGISRSVPTGKTHLTTSVQGTFGYLDPEYFQ 563

Query: 121 TGDCNEKCDVYSFDGSRDSGHLTGR---AWYRSED 152
           +  C  K DVYSF G      LTGR   +  RSED
Sbjct: 564 SYQCTAKSDVYSF-GVVLVELLTGRRPISMVRSED 597

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459920|ref|XP_002264469.1| PREDICTED: wall-associated receptor kinase-like 8-like [Vitis vinifera]

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/155 (49%), Positives = 97/155 (62%), Gaps = 6/155 (3%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+GCCLETE P+LV+EYV  GTL+D I+   Q    P+  + R +IA E+A  IAY+H
Sbjct: 458 VKLLGCCLETEVPLLVYEYVSNGTLSDHIH--AQLEEAPMKWADRFRIAKEVAGAIAYMH 515

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
            A + PI  R+VK SNIL  E+  AKL DF  S S+P G+T +   V GTFGYL PEY  
Sbjct: 516 SAAAVPIYHRDVKSSNILLDEKYRAKLSDFGISRSVPTGKTHLTTSVQGTFGYLDPEYFQ 575

Query: 121 TGDCNEKCDVYSFDGSRDSGHLTGR---AWYRSED 152
           +  C  K DVYSF G      LTGR   +  RSED
Sbjct: 576 SYQCTAKSDVYSF-GVVLVELLTGRRPISMVRSED 609

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545828|ref|XP_002513974.1| kinase, putative [Ricinus communis] gi|223547060|gb|EEF48557.1| kinase, putative [Ricinus communis]

 Score =  131 bits (330), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 68/133 (51%), Positives = 89/133 (66%), Gaps = 2/133 (1%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++LIGCCLETE P+LV+E++  GTL   I++P +    PVT  +RL+IA E+A  +AYLH
Sbjct: 457 VKLIGCCLETEVPLLVYEFIPNGTLYQYIHNPNEE--FPVTWEMRLRIATEVAGALAYLH 514

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
            A S PI  R++K SNIL  E+  AK+ DF  S+SI   +T +  RV GTFGYL PEY  
Sbjct: 515 AAASMPIYHRDIKSSNILLDEKYRAKVADFGTSKSISIDQTHVTTRVQGTFGYLDPEYFQ 574

Query: 121 TGDCNEKCDVYSF 133
           +    EK DVYSF
Sbjct: 575 SSQFTEKSDVYSF 587

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242073744|ref|XP_002446808.1| hypothetical protein SORBIDRAFT_06g022990 [Sorghum bicolor] gi|241937991|gb|EES11136.1| hypothetical protein SORBIDRAFT_06g022990 [Sorghum bicolor]

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/133 (49%), Positives = 87/133 (65%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L GCCLETE P+LV+E++  GTL D ++  +     PV+   RL+I++EIA  +AYLH
Sbjct: 309 VKLYGCCLETEIPLLVYEFISNGTLYDILHREQNGALLPVSWEERLRISIEIASALAYLH 368

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
            A S  I+ R+VK  NIL  +  +AK+ DF  S SIP  +T +   V GTFGYL PEY  
Sbjct: 369 SAASVSILHRDVKSMNILLNDSYIAKVSDFGASRSIPIDQTHLVTAVQGTFGYLDPEYYH 428

Query: 121 TGDCNEKCDVYSF 133
           TG  NEK DVYSF
Sbjct: 429 TGQLNEKSDVYSF 441

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	159
TAIR|locus:2200527	642	WAKL6 "wall associated kinase-	0.836	0.207	0.458	2.4e-26
TAIR|locus:2019893	751	RFO1 "RESISTANCE TO FUSARIUM O	0.823	0.174	0.466	1.6e-25
TAIR|locus:2200562	748	WAKL2 "wall associated kinase-	0.823	0.175	0.466	2e-25
TAIR|locus:2014962	733	WAK5 "wall associated kinase 5	0.823	0.178	0.473	2.5e-25
TAIR|locus:2014897	741	WAK3 "wall associated kinase 3	0.817	0.175	0.470	2.5e-25
TAIR|locus:2076671	355	AT3G57730 [Arabidopsis thalian	0.823	0.369	0.470	3.6e-25
TAIR|locus:2014902	735	WAK1 "cell wall-associated kin	0.823	0.178	0.473	5.2e-25
TAIR|locus:2014952	738	WAK4 "wall associated kinase 4	0.823	0.177	0.466	6.7e-25
TAIR|locus:2014912	732	WAK2 "wall-associated kinase 2	0.823	0.178	0.451	1.4e-24
TAIR|locus:2200552	730	WAKL1 "wall associated kinase-	0.823	0.179	0.443	1.8e-24

TAIR|locus:2200527 WAKL6 "wall associated kinase-like 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 305 (112.4 bits), Expect = 2.4e-26, P = 2.4e-26
 Identities = 61/133 (45%), Positives = 86/133 (64%)

Query:     1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
             ++L+GCCLETE PVLV+EY+  G L  R++   + N   +T  +RL+IA+EIA  ++Y+H
Sbjct:   489 VKLLGCCLETEVPVLVYEYIPNGDLFKRLHEKSESNDYTMTWEVRLRIAIEIAGALSYMH 548

Query:    61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              A S PI  R++K +NIL  E+  AK+ DF  S SI   +T +   V GTFGY+ PEY  
Sbjct:   549 SAASIPIYHRDIKTTNILLDEKYRAKVSDFGTSRSITIAQTHLTTLVAGTFGYMDPEYFL 608

Query:   121 TGDCNEKCDVYSF 133
             +    +K DVYSF
Sbjct:   609 SSQYTDKSDVYSF 621

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2019893 RFO1 "RESISTANCE TO FUSARIUM OXYSPORUM 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 299 (110.3 bits), Expect = 1.6e-25, P = 1.6e-25
 Identities = 62/133 (46%), Positives = 85/133 (63%)

Query:     1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
             ++L+GCCLETE P+LV+E++  G L  R++H        +T  +RL+I++EIA  +AYLH
Sbjct:   478 VKLMGCCLETEVPILVYEHIPNGDLFKRLHHDSDDY--TMTWDVRLRISVEIAGALAYLH 535

Query:    61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              A S P+  R+VK +NIL  E+  AK+ DF  S SI   +T +   V GTFGYL PEY  
Sbjct:   536 SAASTPVYHRDVKTTNILLDEKYRAKVSDFGTSRSINVDQTHLTTLVAGTFGYLDPEYFQ 595

Query:   121 TGDCNEKCDVYSF 133
             T    +K DVYSF
Sbjct:   596 TSQFTDKSDVYSF 608

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005618 "cell wall" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009620 "response to fungus" evidence=IMP

TAIR|locus:2200562 WAKL2 "wall associated kinase-like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 298 (110.0 bits), Expect = 2.0e-25, P = 2.0e-25
 Identities = 62/133 (46%), Positives = 87/133 (65%)

Query:     1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
             ++L+GCCLETE PVLV+E+V  G L  R+ H    ++  +T  +RL IA+EIA  ++YLH
Sbjct:   473 VKLLGCCLETEVPVLVYEFVPNGDLCKRL-HDESDDYT-MTWEVRLHIAIEIAGALSYLH 530

Query:    61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              A S PI  R++K +NIL  E++ AK+ DF  S S+   +T +  +V GTFGY+ PEY  
Sbjct:   531 SAASFPIYHRDIKTTNILLDERNRAKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQ 590

Query:   121 TGDCNEKCDVYSF 133
             +    EK DVYSF
Sbjct:   591 SSKFTEKSDVYSF 603

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0010200 "response to chitin" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2014962 WAK5 "wall associated kinase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 297 (109.6 bits), Expect = 2.5e-25, P = 2.5e-25
 Identities = 63/133 (47%), Positives = 85/133 (63%)

Query:     1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
             ++L+GCCLETE P+LV+E++  GTL D ++     +   +T   RL+IA+E+A  +AYLH
Sbjct:   465 VKLLGCCLETEVPLLVYEFISSGTLFDHLHGSMFDS--SLTWEHRLRIAIEVAGTLAYLH 522

Query:    61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
                S PI+ R+VK +NIL  E   AK+ DF  S  IP  + ++   V GT GYL PEY  
Sbjct:   523 SYASIPIIHRDVKTANILLDENLTAKVADFGASRLIPMDQEQLTTMVQGTLGYLDPEYYN 582

Query:   121 TGDCNEKCDVYSF 133
             TG  NEK DVYSF
Sbjct:   583 TGLLNEKSDVYSF 595

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2014897 WAK3 "wall associated kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 297 (109.6 bits), Expect = 2.5e-25, P = 2.5e-25
 Identities = 63/134 (47%), Positives = 87/134 (64%)

Query:     1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEP-VTCSLRLKIAMEIAYGIAYL 59
             ++++GCCLETE P+LV+E++  GTL D   H     F+  +T   RL+IA+E+A  +AYL
Sbjct:   472 VKILGCCLETEVPLLVYEFITNGTLFD---HLHGSIFDSSLTWEHRLRIAIEVAGTLAYL 528

Query:    60 HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
             H + S PI+ R++K +NIL  E   AK+ DF  S+ IP  + ++   V GT GYL PEY 
Sbjct:   529 HSSASIPIIHRDIKTANILLDENLTAKVADFGASKLIPMDKEQLTTMVQGTLGYLDPEYY 588

Query:   120 ATGDCNEKCDVYSF 133
              TG  NEK DVYSF
Sbjct:   589 TTGLLNEKSDVYSF 602

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2076671 AT3G57730 [Arabidopsis thaliana (taxid:3702)]

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 64/136 (47%), Positives = 87/136 (63%)

Query:     1 MRLIGCCLETENPVLVFEYVEYGTLADR--IYHPRQPNFEPVTCSLRLKIAMEIAYGIAY 58
             ++L+GCCLE   PVLVFE+ E+G L  R  I    + +  P+  SLRLKI  EIA  +AY
Sbjct:   126 LKLLGCCLEFPFPVLVFEFAEHGVLNYRGGITVNGEESLLPL--SLRLKIGKEIANALAY 183

Query:    59 LHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR-VMGTFGYLPPE 117
             LH+AF + I++R+VKP ++       AKL D S+S S+ EG+++I    V+GT+GYL P 
Sbjct:   184 LHMAFPKIIIYRDVKPLHVFLDNNWTAKLSDLSFSISLEEGKSQIEAEDVLGTYGYLDPL 243

Query:   118 YIATGDCNEKCDVYSF 133
             Y AT    E  DVYSF
Sbjct:   244 YFATRIVTEYTDVYSF 259

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2014902 WAK1 "cell wall-associated kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 294 (108.6 bits), Expect = 5.2e-25, P = 5.2e-25
 Identities = 63/133 (47%), Positives = 84/133 (63%)

Query:     1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
             ++L+GCCLETE P+LV+E++  GTL D + H    +   +T   RLKIA+E+A  +AYLH
Sbjct:   466 VKLLGCCLETEVPLLVYEFITNGTLFDHL-HGSMID-SSLTWEHRLKIAIEVAGTLAYLH 523

Query:    61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              + S PI+ R++K +NIL      AK+ DF  S  IP  +  +   V GT GYL PEY  
Sbjct:   524 SSASIPIIHRDIKTANILLDVNLTAKVADFGASRLIPMDKEELETMVQGTLGYLDPEYYN 583

Query:   121 TGDCNEKCDVYSF 133
             TG  NEK DVYSF
Sbjct:   584 TGLLNEKSDVYSF 596

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0007166 "cell surface receptor signaling pathway" evidence=IPI

GO:0005773 "vacuole" evidence=IDA

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0009615 "response to virus" evidence=IEP

GO:0050832 "defense response to fungus" evidence=RCA;IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0009505 "plant-type cell wall" evidence=IDA

TAIR|locus:2014952 WAK4 "wall associated kinase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 293 (108.2 bits), Expect = 6.7e-25, P = 6.7e-25
 Identities = 62/133 (46%), Positives = 85/133 (63%)

Query:     1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
             ++L+GCCLETE P+LV+E++  GTL D ++     +   +T   RL++A+EIA  +AYLH
Sbjct:   467 VKLLGCCLETEVPLLVYEFISSGTLFDHLHGSMFDS--SLTWEHRLRMAVEIAGTLAYLH 524

Query:    61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              + S PI+ R++K +NIL  E   AK+ DF  S  IP  +  +   V GT GYL PEY  
Sbjct:   525 SSASIPIIHRDIKTANILLDENLTAKVADFGASRLIPMDKEDLATMVQGTLGYLDPEYYN 584

Query:   121 TGDCNEKCDVYSF 133
             TG  NEK DVYSF
Sbjct:   585 TGLLNEKSDVYSF 597

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0048527 "lateral root development" evidence=RCA;IMP

GO:0048589 "developmental growth" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

TAIR|locus:2014912 WAK2 "wall-associated kinase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 290 (107.1 bits), Expect = 1.4e-24, P = 1.4e-24
 Identities = 60/133 (45%), Positives = 85/133 (63%)

Query:     1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
             ++++GCCLETE P+LV+E++  GTL D ++     +   +T   RL+IA E+A  +AYLH
Sbjct:   461 VKVLGCCLETEVPLLVYEFINSGTLFDHLHGSLYDS--SLTWEHRLRIATEVAGSLAYLH 518

Query:    61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              + S PI+ R++K +NIL  +   AK+ DF  S  IP  + ++   V GT GYL PEY  
Sbjct:   519 SSASIPIIHRDIKTANILLDKNLTAKVADFGASRLIPMDKEQLTTIVQGTLGYLDPEYYN 578

Query:   121 TGDCNEKCDVYSF 133
             TG  NEK DVYSF
Sbjct:   579 TGLLNEKSDVYSF 591

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009751 "response to salicylic acid stimulus" evidence=IDA

GO:0009311 "oligosaccharide metabolic process" evidence=IMP

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0009992 "cellular water homeostasis" evidence=IMP;IDA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016226 "iron-sulfur cluster assembly" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0048481 "ovule development" evidence=RCA

TAIR|locus:2200552 WAKL1 "wall associated kinase-like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 289 (106.8 bits), Expect = 1.8e-24, P = 1.8e-24
 Identities = 59/133 (44%), Positives = 84/133 (63%)

Query:     1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
             ++L+GCCLETE P+LV+EY+  G L  R+ H    ++  +T  +RL+IA+EIA  + Y+H
Sbjct:   486 VKLLGCCLETEVPILVYEYIPNGDLFKRL-HDESDDYT-MTWEVRLRIAIEIAGALTYMH 543

Query:    61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              A S PI  R++K +NIL  E+  AK+ DF  S S+   +T +   V GTFGY+ PEY  
Sbjct:   544 SAASFPIFHRDIKTTNILLDEKYRAKVSDFGTSRSVTLDQTHLTTLVAGTFGYMDPEYFL 603

Query:   121 TGDCNEKCDVYSF 133
             +     K DVYSF
Sbjct:   604 SSQYTHKSDVYSF 616

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005618 "cell wall" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pm.C_LG_XIII000087 hypothetical protein (344 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	159
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-27
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	4e-20
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	5e-20
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	5e-19
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-18
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	8e-18
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	5e-16
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-15
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	4e-15
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-14
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	2e-12
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	2e-12
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	5e-12
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	1e-11
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	2e-11
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	4e-11
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	8e-11
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	8e-11
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	9e-11
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-10
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-10
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	4e-10
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	5e-10
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	5e-10
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	6e-10
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	9e-10
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	4e-09
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	4e-09
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	4e-09
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	5e-09
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	5e-09
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	5e-09
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	6e-09
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	7e-09
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	8e-09
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	2e-08
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	2e-08
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	2e-08
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	4e-08
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	6e-08
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	1e-07
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	1e-07
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	1e-07
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	1e-07
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	2e-07
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	2e-07
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-07
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	2e-07
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	2e-07
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-07
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	4e-07
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	5e-07
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	5e-07
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	7e-07
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	7e-07
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	8e-07
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	8e-07
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	8e-07
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	9e-07
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	9e-07
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-06
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	1e-06
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	1e-06
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	1e-06
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	1e-06
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	2e-06
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	2e-06
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	2e-06
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	3e-06
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	3e-06
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	3e-06
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	3e-06
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	3e-06
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	3e-06
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	3e-06
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	4e-06
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	4e-06
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	4e-06
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	4e-06
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	6e-06
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	6e-06
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	7e-06
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	7e-06
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	8e-06
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	9e-06
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	9e-06
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	9e-06
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	9e-06
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	9e-06
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	1e-05
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	1e-05
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	1e-05
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	1e-05
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	1e-05
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	1e-05
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	1e-05
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	1e-05
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	1e-05
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	1e-05
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	1e-05
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	2e-05
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	2e-05
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	2e-05
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	2e-05
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	2e-05
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	2e-05
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	2e-05
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	2e-05
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	2e-05
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	2e-05
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	3e-05
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	3e-05
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	3e-05
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	3e-05
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	3e-05
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	4e-05
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	5e-05
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	5e-05
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	5e-05
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	5e-05
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	6e-05
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	6e-05
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	6e-05
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	6e-05
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	7e-05
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	7e-05
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	8e-05
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	8e-05
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	1e-04
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	1e-04
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	1e-04
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	1e-04
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	1e-04
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	1e-04
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	1e-04
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	1e-04
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	2e-04
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-04
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	2e-04
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	2e-04
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	2e-04
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	3e-04
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	3e-04
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	3e-04
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	3e-04
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	4e-04
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	4e-04
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	4e-04
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	4e-04
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	5e-04
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	5e-04
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	5e-04
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	5e-04
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	6e-04
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	6e-04
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	7e-04
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	7e-04
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	7e-04
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	8e-04
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	8e-04
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	8e-04
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	8e-04
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	8e-04
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	9e-04
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	9e-04
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	0.001
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	0.001
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	0.001
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	0.001
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	0.001
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	0.002
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	0.002
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	0.002
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	0.002
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	0.002
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	0.003
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	0.003
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	0.003
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	0.003
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	0.003
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	0.003
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	0.003
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	0.003
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	0.004
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	0.004
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	0.004

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  101 bits (253), Expect = 2e-27
 Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 10/135 (7%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L G   +  +  LV EY E G+L D +      N   ++    L+I ++I  G+ YLH
Sbjct: 54  VKLYGVFEDENHLYLVMEYCEGGSLKDLLKE----NEGKLSEDEILRILLQILEGLEYLH 109

Query: 61  VAFSRPIVFRNVKPSNILFQEQS-VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
              S  I+ R++KP NIL    +   KL DF  S+ +   ++ ++  V GT  Y+ PE +
Sbjct: 110 ---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIV-GTPAYMAPEVL 165

Query: 120 -ATGDCNEKCDVYSF 133
              G  +EK D++S 
Sbjct: 166 LGKGYYSEKSDIWSL 180

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 83.3 bits (207), Expect = 4e-20
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 10/133 (7%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL     + +   LV EY E G L D +   ++                +I   + YLH
Sbjct: 60  VRLYDVFEDEDKLYLVMEYCEGGDLFDLLK--KRGRLSEDEAR---FYLRQILSALEYLH 114

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ IV R++KP NIL  E    KL DF  +  +  GE       +GT  Y+ PE + 
Sbjct: 115 ---SKGIVHRDLKPENILLDEDGHVKLADFGLARQLDPGEK--LTTFVGTPEYMAPEVLL 169

Query: 121 TGDCNEKCDVYSF 133
                +  D++S 
Sbjct: 170 GKGYGKAVDIWSL 182

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 83.0 bits (206), Expect = 5e-20
 Identities = 47/142 (33%), Positives = 63/142 (44%), Gaps = 18/142 (12%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLAD-----RIYHPRQPNFEPVTCSLRLKIAMEIAYGI 56
           RL+G C E E   LV EY+E G L D     R   P  P    ++    L  A++IA G+
Sbjct: 60  RLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFP-SPEKSTLSLKDLLSFAIQIAKGM 118

Query: 57  AYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLP- 115
            YL    S+  V R++   N L  E  V K+ DF  S  + + +         T G LP 
Sbjct: 119 EYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY----YRKKTGGKLPI 171

Query: 116 ----PEYIATGDCNEKCDVYSF 133
               PE +  G    K DV+SF
Sbjct: 172 RWMAPESLKDGIFTSKSDVWSF 193

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 80.3 bits (199), Expect = 5e-19
 Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 9/133 (6%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           +L+G C E E   +V EY+E G L   +    + N   ++ S  L  A++IA G+ YL  
Sbjct: 65  KLLGVCTEEEPLYIVMEYMEGGDLLSYL----RKNRPKLSLSDLLSFALQIARGMEYLE- 119

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYLPPEYIA 120
             S+  + R++   N L  E  V K+ DF  S  + + +  R RG       ++ PE + 
Sbjct: 120 --SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGG-KLPIRWMAPESLK 176

Query: 121 TGDCNEKCDVYSF 133
            G    K DV+SF
Sbjct: 177 EGKFTSKSDVWSF 189

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 78.7 bits (195), Expect = 2e-18
 Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 6/132 (4%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           +L+G C E E  ++V EY+  G L D +   R+   + ++ S  L  A++IA G+ YL  
Sbjct: 65  KLLGVCTEEEPLMIVMEYMPGGDLLDYL---RKNRPKELSLSDLLSFALQIARGMEYLE- 120

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
             S+  + R++   N L  E  V K+ DF  S  + + +            ++ PE +  
Sbjct: 121 --SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKE 178

Query: 122 GDCNEKCDVYSF 133
           G    K DV+SF
Sbjct: 179 GKFTSKSDVWSF 190

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 77.2 bits (191), Expect = 8e-18
 Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 24/141 (17%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           RL+G C + E   +V EY+  G L D +    +     +T    L++A++IA G+ YL  
Sbjct: 65  RLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGE----KLTLKDLLQMALQIAKGMEYLE- 119

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDF---------SYSESIPEGETRIRGRVMGTFG 112
             S+  V R++   N L  E  V K+ DF          Y      G+  I+        
Sbjct: 120 --SKNFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIK-------- 169

Query: 113 YLPPEYIATGDCNEKCDVYSF 133
           ++ PE +  G    K DV+SF
Sbjct: 170 WMAPESLKDGKFTSKSDVWSF 190

Length = 258

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 72.3 bits (178), Expect = 5e-16
 Identities = 44/134 (32%), Positives = 65/134 (48%), Gaps = 10/134 (7%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RLI    + ++  LV EY E G L D +   R             KIA++I  G+ YLH
Sbjct: 61  VRLIDAFEDKDHLYLVMEYCEGGDLFDYLS--RGGPLSEDEA---KKIALQILRGLEYLH 115

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S  I+ R++KP NIL  E  V K+ DF  ++ + +  + +   V GT  Y+ PE + 
Sbjct: 116 ---SNGIIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLTTFV-GTPWYMAPEVLL 171

Query: 121 TG-DCNEKCDVYSF 133
            G     K DV+S 
Sbjct: 172 GGNGYGPKVDVWSL 185

Length = 260

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 70.3 bits (173), Expect = 3e-15
 Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 13/136 (9%)

Query: 2   RLIGCCL-ETENPVLVF-EYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAY 58
           R  G    E +N + +F EYV  G+L+  +   +     EPV          +I  G+AY
Sbjct: 63  RYYGSERDEEKNTLNIFLEYVSGGSLSSLLK--KFGKLPEPVIRKY----TRQILEGLAY 116

Query: 59  LHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM-GTFGYLPPE 117
           LH   S  IV R++K +NIL     V KL DF  ++ + + ET      + GT  ++ PE
Sbjct: 117 LH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPE 173

Query: 118 YIATGDCNEKCDVYSF 133
            I   +     D++S 
Sbjct: 174 VIRGEEYGRAADIWSL 189

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 69.9 bits (172), Expect = 4e-15
 Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 23/138 (16%)

Query: 3   LIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAY-------G 55
             G  L+ +   +V E+   G+L D +    Q   E            +IAY       G
Sbjct: 62  YYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTES-----------QIAYVCKELLKG 110

Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLP 115
           + YLH   S  I+ R++K +NIL       KL DF  S  + + + R    ++GT  ++ 
Sbjct: 111 LEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARN--TMVGTPYWMA 165

Query: 116 PEYIATGDCNEKCDVYSF 133
           PE I     + K D++S 
Sbjct: 166 PEVINGKPYDYKADIWSL 183

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 69.4 bits (168), Expect = 2e-14
 Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 15/160 (9%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           +L     +  +  LV EYV+ G+L D +    +    P++ S  L I  +I   + YLH 
Sbjct: 62  KLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKG--PLSESEALFILAQILSALEYLH- 118

Query: 62  AFSRPIVFRNVKPSNILFQEQS-VAKLFDFSYSESIPEGETRIRGR-----VMGTFGYLP 115
             S+ I+ R++KP NIL      V KL DF  ++ +P+  +           +GT GY+ 
Sbjct: 119 --SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMA 176

Query: 116 PEYIATGDCNE---KCDVYSFDGSRDSGHLTGRAWYRSED 152
           PE +            D++S  G      LTG   +  E 
Sbjct: 177 PEVLLGLSLAYASSSSDIWSL-GITLYELLTGLPPFEGEK 215

Length = 384

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 62.5 bits (152), Expect = 2e-12
 Identities = 46/144 (31%), Positives = 70/144 (48%), Gaps = 15/144 (10%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTL----------ADRIYHPRQPNFEPVTCSLRLKIAM 50
           ++  G C E + P++VFEY+E+G L          A  +  P  P  E +T S  L+IA+
Sbjct: 71  VKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGE-LTLSQLLQIAV 129

Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMG 109
           +IA G+ YL    S+  V R++   N L     V K+ DF  S  +   +  R+ G  M 
Sbjct: 130 QIASGMVYLA---SQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTML 186

Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
              ++PPE I       + DV+SF
Sbjct: 187 PIRWMPPESIMYRKFTTESDVWSF 210

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 62.2 bits (152), Expect = 2e-12
 Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 11/120 (9%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
           LV EY   G L   +   ++  F E      R   A EI   + YLH   S  I++R++K
Sbjct: 70  LVLEYAPGGELFSHLS--KEGRFSEERA---RFYAA-EIVLALEYLH---SLGIIYRDLK 120

Query: 74  PSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
           P NIL       KL DF  ++ +    +R      GT  YL PE +      +  D +S 
Sbjct: 121 PENILLDADGHIKLTDFGLAKELSSEGSRTNTFC-GTPEYLAPEVLLGKGYGKAVDWWSL 179

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 61.7 bits (150), Expect = 5e-12
 Identities = 42/117 (35%), Positives = 57/117 (48%), Gaps = 11/117 (9%)

Query: 18  EYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNI 77
           EY E G+L D IY   +     +   +  KIA  +  G++YLH   SR I+ R++KPSNI
Sbjct: 81  EYCEGGSL-DSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNI 136

Query: 78  LFQEQSVAKLFDFSYSESIPEGE--TRIRGRVMGTFGYLPPEYIATGDCNEKCDVYS 132
           L   +   KL DF  S     GE    + G   GT  Y+ PE I     +   DV+S
Sbjct: 137 LLTRKGQVKLCDFGVS-----GELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWS 188

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 60.6 bits (147), Expect = 1e-11
 Identities = 44/131 (33%), Positives = 62/131 (47%), Gaps = 14/131 (10%)

Query: 5   GCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
           G  L   N  +  E+++ G+L DRIY        P+   +  KIA+ +  G+ YL+    
Sbjct: 70  GAFLNENNICMCMEFMDCGSL-DRIYK----KGGPIPVEILGKIAVAVVEGLTYLY--NV 122

Query: 65  RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE--TRIRGRVMGTFGYLPPEYIATG 122
             I+ R++KPSNIL   +   KL DF  S     GE    I    +GT  Y+ PE I  G
Sbjct: 123 HRIMHRDIKPSNILVNSRGQIKLCDFGVS-----GELINSIADTFVGTSTYMSPERIQGG 177

Query: 123 DCNEKCDVYSF 133
               K DV+S 
Sbjct: 178 KYTVKSDVWSL 188

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 59.8 bits (145), Expect = 2e-11
 Identities = 46/126 (36%), Positives = 64/126 (50%), Gaps = 16/126 (12%)

Query: 9   ETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI 67
           ET++ + LV   +  G L   IY+   P F+          A EI  G+  LH      I
Sbjct: 70  ETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVF---YAAEITCGLEDLH---RERI 123

Query: 68  VFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEK 127
           V+R++KP NIL  +    ++ D   +  IPEGET IRGRV GT GY+ PE +     NE+
Sbjct: 124 VYRDLKPENILLDDYGHIRISDLGLAVEIPEGET-IRGRV-GTVGYMAPEVVK----NER 177

Query: 128 CDVYSF 133
              Y+F
Sbjct: 178 ---YTF 180

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 58.9 bits (143), Expect = 4e-11
 Identities = 38/126 (30%), Positives = 54/126 (42%), Gaps = 15/126 (11%)

Query: 14  VLVF-EYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNV 72
           V +F EY   GTL + + H R                +++  G+AYLH   S  IV R++
Sbjct: 74  VYIFMEYCSGGTLEELLEHGR---ILDEHVIRVY--TLQLLEGLAYLH---SHGIVHRDI 125

Query: 73  KPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRV---MGTFGYLPPEYIATGDCNEK-- 127
           KP+NI      V KL DF  +  +    T +   V    GT  Y+ PE I  G       
Sbjct: 126 KPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGR 185

Query: 128 -CDVYS 132
             D++S
Sbjct: 186 AADIWS 191

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 58.1 bits (140), Expect = 8e-11
 Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 9/112 (8%)

Query: 9   ETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI 67
           ET++ + LV   +  G L   IYH  +  FE          A EI  G+  LH      I
Sbjct: 70  ETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVF---YAAEICCGLEDLH---QERI 123

Query: 68  VFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
           V+R++KP NIL  +    ++ D   +  +PEG+T I+GRV GT GY+ PE +
Sbjct: 124 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEVV 173

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 58.1 bits (140), Expect = 8e-11
 Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 16/145 (11%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE-----------PVTCSLRLKIA 49
           +R  G C E    ++VFEY+ +G L +R      P+ +            +T    L IA
Sbjct: 70  VRFYGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIA 128

Query: 50  MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVM 108
            +IA G+ YL    S   V R++   N L  +  V K+ DF  S  I   +  R+ GR M
Sbjct: 129 SQIASGMVYLA---SLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 185

Query: 109 GTFGYLPPEYIATGDCNEKCDVYSF 133
               ++PPE I       + D++SF
Sbjct: 186 LPIRWMPPESILYRKFTTESDIWSF 210

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 58.1 bits (140), Expect = 9e-11
 Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 9/112 (8%)

Query: 9   ETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI 67
           ET++ + LV   +  G L   IY+   P FE       L  A EI  G+  LH       
Sbjct: 70  ETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERA---LFYAAEILCGLEDLH---RENT 123

Query: 68  VFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
           V+R++KP NIL  +    ++ D   +  IPEGE+ IRGRV GT GY+ PE +
Sbjct: 124 VYRDLKPENILLDDYGHIRISDLGLAVKIPEGES-IRGRV-GTVGYMAPEVL 173

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 57.2 bits (139), Expect = 2e-10
 Identities = 36/151 (23%), Positives = 56/151 (37%), Gaps = 27/151 (17%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           +L     + EN   V EY   G L   I      + +      R   A EI   + YLH 
Sbjct: 66  KLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEK----CTRFYAA-EILLALEYLH- 119

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDF-------------------SYSESIPEGETR 102
             S+ I+ R++KP NIL  +    K+ DF                   +  +S  E   R
Sbjct: 120 --SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRR 177

Query: 103 IRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
                +GT  Y+ PE +      +  D+++ 
Sbjct: 178 RFASFVGTAEYVSPELLNEKPAGKSSDLWAL 208

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 56.8 bits (138), Expect = 3e-10
 Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 20/125 (16%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLK------IAMEIAYGIAYLHVAFSRPIV 68
           +V EY++ G+L D I              +R+       +  E+  G+ YLH   S+ ++
Sbjct: 92  VVMEYMDGGSLTDIITQ----------NFVRMNEPQIAYVCREVLQGLEYLH---SQNVI 138

Query: 69  FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
            R++K  NIL  +    KL DF ++  + + +++ R  V+GT  ++ PE I   D   K 
Sbjct: 139 HRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSK-RNSVVGTPYWMAPEVIKRKDYGPKV 197

Query: 129 DVYSF 133
           D++S 
Sbjct: 198 DIWSL 202

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 56.1 bits (136), Expect = 4e-10
 Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 9/131 (6%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           + IG    +++  ++ EY E G+L   I       F P   SL      ++  G+AYLH 
Sbjct: 63  KYIGSIETSDSLYIILEYAENGSLRQII-----KKFGPFPESLVAVYVYQVLQGLAYLH- 116

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
              + ++ R++K +NIL  +  V KL DF  +  + +        V+GT  ++ PE I  
Sbjct: 117 --EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDAS-VVGTPYWMAPEVIEM 173

Query: 122 GDCNEKCDVYS 132
              +   D++S
Sbjct: 174 SGASTASDIWS 184

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 56.2 bits (135), Expect = 5e-10
 Identities = 45/126 (35%), Positives = 64/126 (50%), Gaps = 16/126 (12%)

Query: 9   ETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI 67
           ET++ + LV   +  G L   IY+   P F+          A E+  G+  L       I
Sbjct: 70  ETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIF---YAAELCCGLEDLQ---RERI 123

Query: 68  VFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEK 127
           V+R++KP NIL  ++   ++ D   +  IPEGET +RGRV GT GY+ PE I     NEK
Sbjct: 124 VYRDLKPENILLDDRGHIRISDLGLAVQIPEGET-VRGRV-GTVGYMAPEVIN----NEK 177

Query: 128 CDVYSF 133
              Y+F
Sbjct: 178 ---YTF 180

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 55.7 bits (135), Expect = 5e-10
 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 4/78 (5%)

Query: 55  GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
           G+ YLH   S   + R++K  NIL  E+  AKL DF  S  +       R  V+GT  ++
Sbjct: 111 GLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQL-TDTMAKRNTVIGTPFWM 166

Query: 115 PPEYIATGDCNEKCDVYS 132
            PE I     N K D++S
Sbjct: 167 APEVIQEIGYNNKADIWS 184

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 55.7 bits (135), Expect = 6e-10
 Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 15/121 (12%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           +V EY++ G+LAD +   +         +    IA +I  G+ YLH    R I+ R++KP
Sbjct: 76  IVLEYMDGGSLADLLK--KVGKIPEPVLAY---IARQILKGLDYLHT--KRHIIHRDIKP 128

Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFD 134
           SN+L   +   K+ DF  S+ +     +    V GT  Y+ PE I       + + YS+ 
Sbjct: 129 SNLLINSKGEVKIADFGISKVLENTLDQCNTFV-GTVTYMSPERI-------QGESYSYA 180

Query: 135 G 135
            
Sbjct: 181 A 181

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 55.4 bits (133), Expect = 9e-10
 Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 27/155 (17%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ-------------------PNFEPVT 41
           ++L G C +    +L+ EY +YG+L   +   R+                   P+   +T
Sbjct: 66  IKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALT 125

Query: 42  CSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET 101
               +  A +I+ G+ YL       +V R++   N+L  E    K+ DF  S  + E ++
Sbjct: 126 MGDLISFAWQISRGMQYLA---EMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDS 182

Query: 102 ---RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
              R +GR+     ++  E +       + DV+SF
Sbjct: 183 YVKRSKGRI--PVKWMAIESLFDHIYTTQSDVWSF 215

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 53.5 bits (128), Expect = 4e-09
 Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 14/143 (9%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLAD--RIYHPR-------QPNFEPVTCSLRLKIAME 51
           ++  G C+E +  ++VFEY+++G L    R + P            E +T S  L IA +
Sbjct: 70  VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAE-LTQSQMLHIAQQ 128

Query: 52  IAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGT 110
           IA G+ YL    S+  V R++   N L  E  + K+ DF  S  +   +  R+ G  M  
Sbjct: 129 IAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 185

Query: 111 FGYLPPEYIATGDCNEKCDVYSF 133
             ++PPE I       + DV+S 
Sbjct: 186 IRWMPPESIMYRKFTTESDVWSL 208

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 53.5 bits (128), Expect = 4e-09
 Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 17/146 (11%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIY------------HPRQPNFEPVTCSLRLKI 48
           ++  G C + +  ++VFEY+++G L   +              PRQ   E +  S  L I
Sbjct: 70  VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE-LGLSQMLHI 128

Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRV 107
           A +IA G+ YL    S+  V R++   N L     + K+ DF  S  +   +  R+ G  
Sbjct: 129 ASQIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 185

Query: 108 MGTFGYLPPEYIATGDCNEKCDVYSF 133
           M    ++PPE I       + DV+SF
Sbjct: 186 MLPIRWMPPESIMYRKFTTESDVWSF 211

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 53.2 bits (128), Expect = 4e-09
 Identities = 40/138 (28%), Positives = 54/138 (39%), Gaps = 9/138 (6%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLAD--RIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
           RLIG   E     ++ E +  G L    R   PR      +T    L  A ++A G  YL
Sbjct: 73  RLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYL 132

Query: 60  HVAFSRPIVFRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLP 115
                   + R++   N L        VAK+ DF  +  I      R  GR M    ++P
Sbjct: 133 E---ENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMP 189

Query: 116 PEYIATGDCNEKCDVYSF 133
           PE    G    K DV+SF
Sbjct: 190 PEAFLDGIFTSKTDVWSF 207

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 53.3 bits (128), Expect = 5e-09
 Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 21/151 (13%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYH--PRQ---------------PNFEPVTCS 43
           ++L+G C   +   L+FEY+ YG L + + H  PR                 N  P++C+
Sbjct: 71  VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCT 130

Query: 44  LRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TR 102
            +L IA ++A G+AYL     R  V R++   N L  E  V K+ DF  S +I   +  +
Sbjct: 131 EQLCIAKQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 187

Query: 103 IRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
                     ++PPE I       + DV+++
Sbjct: 188 ASENDAIPIRWMPPESIFYNRYTTESDVWAY 218

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 53.2 bits (128), Expect = 5e-09
 Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 13/136 (9%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           RL G  L T   ++V E    G+L DR+   R+        S     A++IA G+ YL  
Sbjct: 60  RLYGVVL-THPLMMVTELAPLGSLLDRL---RKDALGHFLISTLCDYAVQIANGMRYLE- 114

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRG----RVMGTFGYLPPE 117
             S+  + R++   NIL       K+ DF    ++P+ E         +V   F +  PE
Sbjct: 115 --SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKV--PFAWCAPE 170

Query: 118 YIATGDCNEKCDVYSF 133
            + T   +   DV+ F
Sbjct: 171 SLRTRTFSHASDVWMF 186

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 53.2 bits (128), Expect = 5e-09
 Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 20/137 (14%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           +L+G  L+     +V EY+  G+L D +   R      +T + +L  A+++  G+ YL  
Sbjct: 64  QLLGVVLQGNPLYIVTEYMAKGSLVDYL---RSRGRAVITLAQQLGFALDVCEGMEYLE- 119

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLP-----P 116
              +  V R++   N+L  E  VAK+ DF  ++   +G+           G LP     P
Sbjct: 120 --EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDS---------GKLPVKWTAP 168

Query: 117 EYIATGDCNEKCDVYSF 133
           E +     + K DV+SF
Sbjct: 169 EALREKKFSTKSDVWSF 185

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 52.9 bits (128), Expect = 6e-09
 Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 25/128 (19%)

Query: 16  VFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS 75
           V EY + G L+ +I   ++   +P      L   +++   + YLH   SR I+ R++KP 
Sbjct: 77  VMEYADGGDLSQKI-KKQKKEGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQ 132

Query: 76  NILFQEQSVAKLFDF----SYSESIPEGETRIRGRVMGTFGYLPPE------YIATGDCN 125
           NI      + KL DF      S ++   +T +     GT  YL PE      Y      N
Sbjct: 133 NIFLTSNGLVKLGDFGISKVLSSTVDLAKTVV-----GTPYYLSPELCQNKPY------N 181

Query: 126 EKCDVYSF 133
            K D++S 
Sbjct: 182 YKSDIWSL 189

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 52.7 bits (127), Expect = 7e-09
 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 5/85 (5%)

Query: 48  IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRV 107
              EI   + YLH   S+ I+ R++KP NIL  EQ    + DF+ + +    +T      
Sbjct: 105 WICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIA-TKVTPDTLTTSTS 160

Query: 108 MGTFGYLPPEYIATGDCNEKCDVYS 132
            GT GY+ PE +     +   D +S
Sbjct: 161 -GTPGYMAPEVLCRQGYSVAVDWWS 184

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 52.6 bits (126), Expect = 8e-09
 Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 21/137 (15%)

Query: 5   GCCLETENPV--LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVA 62
           GCC E       L+ EYV  G+L D  Y P+      +  +  L  A +I  G+AYLH  
Sbjct: 73  GCCSEQGGKGLQLIMEYVPLGSLRD--YLPKHK----LNLAQLLLFAQQICEGMAYLH-- 124

Query: 63  FSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG 122
            S+  + R++   N+L     + K+ DF  ++++PEG    R R  G      P +    
Sbjct: 125 -SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD----SPVFWYAV 179

Query: 123 DCNEKC------DVYSF 133
           +C ++       DV+SF
Sbjct: 180 ECLKENKFSYASDVWSF 196

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 51.6 bits (123), Expect = 2e-08
 Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 23/147 (15%)

Query: 1   MRLIGCCLETE------NPVLVFEYVEYGTLADRIYHPR---QPNFEPVTCSLRLKIAME 51
           MRLIG CL+T       +PV++  ++++G L   + + R    P + P    + +K   +
Sbjct: 63  MRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPT--QMLVKFMTD 120

Query: 52  IAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF 111
           IA G+ YL    S+  + R++   N +  E     + DF  S+ I  G+   +GR+    
Sbjct: 121 IASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRI---- 173

Query: 112 GYLPPEYIATGDCNE-----KCDVYSF 133
             +P ++IA     +     K DV+SF
Sbjct: 174 AKMPVKWIAIESLADRVYTTKSDVWSF 200

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 51.5 bits (124), Expect = 2e-08
 Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 8/104 (7%)

Query: 14  VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
           VLV EY+    L++ +    +P  E    S    +      G+AY+H   +  I+ R++K
Sbjct: 75  VLVMEYMP-SDLSEVLRDEERPLPEAQVKSYMRMLLK----GVAYMH---ANGIMHRDLK 126

Query: 74  PSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPE 117
           P+N+L     V K+ DF  +    E E R+    + T  Y  PE
Sbjct: 127 PANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPE 170

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 51.4 bits (123), Expect = 2e-08
 Identities = 36/95 (37%), Positives = 46/95 (48%), Gaps = 20/95 (21%)

Query: 48  IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRV 107
           +A +I  GIAYLH    R IV R++KPSN+L       K+ DF        G +RI  + 
Sbjct: 173 VARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADF--------GVSRILAQT 221

Query: 108 M-------GTFGYLPPEYIATGDCNE-KCDVYSFD 134
           M       GT  Y+ PE I T D N    D Y+ D
Sbjct: 222 MDPCNSSVGTIAYMSPERINT-DLNHGAYDGYAGD 255

Length = 353

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 50.5 bits (121), Expect = 4e-08
 Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 13/137 (9%)

Query: 2   RLIGCCLET--ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
           +  G C +    +  L+ EY+  G+L  R Y  R  +   +     L  + +I  G+ YL
Sbjct: 70  KYKGVCEKPGGRSLRLIMEYLPSGSL--RDYLQRHRD--QINLKRLLLFSSQICKGMDYL 125

Query: 60  HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMG---TFGYLPP 116
               S+  + R++   NIL + + + K+ DF  ++ +PE +     +  G    F Y  P
Sbjct: 126 G---SQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWY-AP 181

Query: 117 EYIATGDCNEKCDVYSF 133
           E + T   +   DV+SF
Sbjct: 182 ECLRTSKFSSASDVWSF 198

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 50.0 bits (120), Expect = 6e-08
 Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 9/139 (6%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
           +RL+G     +  ++V E +  G L   +   R      P   P T    +++A EIA G
Sbjct: 72  VRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADG 131

Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
           +AYL    ++  V R++   N +  E    K+ DF  +  I E +  R  G+ +    ++
Sbjct: 132 MAYLA---AKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 188

Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE +  G    K DV+SF
Sbjct: 189 APESLKDGVFTTKSDVWSF 207

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 49.4 bits (118), Expect = 1e-07
 Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 12/131 (9%)

Query: 5   GCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
           GC  + E   +  EY+  G++ D++       +  +T ++  K   +I  G+ YLH   S
Sbjct: 71  GCLRDDETLSIFMEYMPGGSVKDQL-----KAYGALTETVTRKYTRQILEGVEYLH---S 122

Query: 65  RPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLPPEYIAT 121
             IV R++K +NIL       KL DF  S   ++I    T ++  V GT  ++ PE I+ 
Sbjct: 123 NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKS-VTGTPYWMSPEVISG 181

Query: 122 GDCNEKCDVYS 132
                K DV+S
Sbjct: 182 EGYGRKADVWS 192

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 49.4 bits (118), Expect = 1e-07
 Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 17/144 (11%)

Query: 3   LIGCCLETENPVLVFEYVEYGTLADRIYHPRQPN------------FEPVTCSLRLKIAM 50
           L+G C + +   ++FEY+ +G L + +     P+               + CS  L IA+
Sbjct: 73  LLGVCTKEQPTCMLFEYLAHGDLHEFLVR-NSPHSDVGAESGDETVKSSLDCSDFLHIAI 131

Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMG 109
           +IA G+ YL    S   V R++   N L  E    K+ DF  S  I   +  R++ + + 
Sbjct: 132 QIAAGMEYLS---SHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLL 188

Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
              ++PPE I  G    + D++SF
Sbjct: 189 PVRWMPPEAILYGKFTTESDIWSF 212

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 10/89 (11%)

Query: 15  LVFEYVEYGTLADRIYHPRQPN-FEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
           LVFEYVE  TL + +     P    P           ++   IAY H   S  I+ R++K
Sbjct: 77  LVFEYVER-TLLELL--EASPGGLPPDAVRS---YIWQLLQAIAYCH---SHNIIHRDIK 127

Query: 74  PSNILFQEQSVAKLFDFSYSESIPEGETR 102
           P NIL  E  V KL DF ++ ++      
Sbjct: 128 PENILVSESGVLKLCDFGFARALRARPAS 156

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 48.8 bits (117), Expect = 1e-07
 Identities = 40/129 (31%), Positives = 57/129 (44%), Gaps = 27/129 (20%)

Query: 15  LVFEYVEYGTLADRIYH-PRQPNFEPVTCSLRLKIAMEIAY-------GIAYLHVAFSRP 66
           +V EY   G+L D IY   R P  E            +IAY       G+AYLH      
Sbjct: 77  IVMEYCGGGSLQD-IYQVTRGPLSEL-----------QIAYVCRETLKGLAYLH---ETG 121

Query: 67  IVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA---TGD 123
            + R++K +NIL  E    KL DF  S  +     + R   +GT  ++ PE  A    G 
Sbjct: 122 KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAK-RKSFIGTPYWMAPEVAAVERKGG 180

Query: 124 CNEKCDVYS 132
            + KCD+++
Sbjct: 181 YDGKCDIWA 189

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 48.6 bits (116), Expect = 2e-07
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 8/86 (9%)

Query: 47  KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR 106
           +   E+  G+  LH    R I+ R++KP N+L  +    KL DF  S +   G      +
Sbjct: 101 QYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRN---GL--ENKK 152

Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYS 132
            +GT  YL PE I     ++  D +S
Sbjct: 153 FVGTPDYLAPETILGVGDDKMSDWWS 178

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 48.5 bits (116), Expect = 2e-07
 Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 13/125 (10%)

Query: 15  LVFEYVEYGTLADRIYH--PRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNV 72
           LV  Y+  G+L D +    PR    E +  ++ LK   E+  G+ YLH   S   + R++
Sbjct: 76  LVMPYLSGGSLLDIMKSSYPRGGLDEAIIATV-LK---EVLKGLEYLH---SNGQIHRDI 128

Query: 73  KPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR---VMGTFGYLPPEYIATGD-CNEKC 128
           K  NIL  E    K+ DF  S S+ +G  R R      +GT  ++ PE +      + K 
Sbjct: 129 KAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKA 188

Query: 129 DVYSF 133
           D++SF
Sbjct: 189 DIWSF 193

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 48.7 bits (116), Expect = 2e-07
 Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 7/127 (5%)

Query: 6   CCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
             L+     +V EY E G L   +   R     P+      +  ++I  G+A+LH   S+
Sbjct: 67  SFLDKGKLNIVMEYAENGDLHKLLKMQRG---RPLPEDQVWRFFIQILLGLAHLH---SK 120

Query: 66  PIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN 125
            I+ R++K  N+        K+ D   ++ + +  T     ++GT  YL PE       N
Sbjct: 121 KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSD-NTNFANTIVGTPYYLSPELCEDKPYN 179

Query: 126 EKCDVYS 132
           EK DV++
Sbjct: 180 EKSDVWA 186

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 48.7 bits (116), Expect = 2e-07
 Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 15/119 (12%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LV   +  G L   IY+  +P F     +  +  A +I  G+ +LH    R IV+R++KP
Sbjct: 70  LVMTLMNGGDLKYHIYNVGEPGFPE---ARAIFYAAQIICGLEHLH---QRRIVYRDLKP 123

Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
            N+L  +    ++ D   +  +  G  +I+GR  GT GY+ PE +          VY F
Sbjct: 124 ENVLLDDHGNVRISDLGLAVELKGG-KKIKGRA-GTPGYMAPEVLQGE-------VYDF 173

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 48.6 bits (116), Expect = 2e-07
 Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 7/136 (5%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLAD--RIYHPRQPNFE--PVTCSLRLKIAMEIAYGIA 57
           RL+G C E E   ++ EY + G L    R    +    +  P++   ++ +  +IA G+ 
Sbjct: 72  RLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMD 131

Query: 58  YLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPE 117
           +L  + +R  V R++   N L   Q   K+   S S+ +   E       +    +L PE
Sbjct: 132 HL--SNAR-FVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPE 188

Query: 118 YIATGDCNEKCDVYSF 133
            +   D + K DV+SF
Sbjct: 189 AVQEDDFSTKSDVWSF 204

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 48.2 bits (115), Expect = 2e-07
 Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 12/130 (9%)

Query: 3   LIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVA 62
           L G  L      +V EY  +G L+  I   R+   + +      +I +++  G+  LH  
Sbjct: 69  LDGNKL-----CIVMEYAPFGDLSKAISK-RKKKRKLIPEQEIWRIFIQLLRGLQALH-- 120

Query: 63  FSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG 122
             + I+ R++K +NIL     + K+ D   S+ + +   +     +GT  Y+ PE     
Sbjct: 121 -EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKT---QIGTPHYMAPEVWKGR 176

Query: 123 DCNEKCDVYS 132
             + K D++S
Sbjct: 177 PYSYKSDIWS 186

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 47.5 bits (114), Expect = 4e-07
 Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 20/123 (16%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
           LV EYV  G L    +  +   F EPV        A ++   + YLH   S  IV+R++K
Sbjct: 78  LVMEYVPGGELFS--HLRKSGRFPEPVARFY----AAQVVLALEYLH---SLDIVYRDLK 128

Query: 74  PSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM---GTFGYLPPEYIATGDCNEKCDV 130
           P N+L       K+ DF +++       R++GR     GT  YL PE I +    +  D 
Sbjct: 129 PENLLLDSDGYIKITDFGFAK-------RVKGRTYTLCGTPEYLAPEIILSKGYGKAVDW 181

Query: 131 YSF 133
           ++ 
Sbjct: 182 WAL 184

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 47.4 bits (113), Expect = 5e-07
 Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 11/117 (9%)

Query: 18  EYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM--EIAYGIAYLHVAFSRPIVFRNVKPS 75
           EY   GTL D+I   +   FE       + +    +I   ++Y+H A    I+ R++K  
Sbjct: 79  EYANGGTLYDKIVRQKGQLFEE-----EMVLWYLFQIVSAVSYIHKA---GILHRDIKTL 130

Query: 76  NILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYS 132
           NI   +  + KL DF  S+ I   E  +   V+GT  Y+ PE       N K D+++
Sbjct: 131 NIFLTKAGLIKLGDFGISK-ILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWA 186

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 47.2 bits (112), Expect = 5e-07
 Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 9/126 (7%)

Query: 8   LETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI 67
           LE +  ++V EY   GTLA+ I        +  T    L   ++I   + ++H   ++ I
Sbjct: 69  LEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTI---LHFFVQILLALHHVH---TKLI 122

Query: 68  VFRNVKPSNILF-QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNE 126
           + R++K  NIL  + + V K+ DF  S+ +          V+GT  Y+ PE       N+
Sbjct: 123 LHRDLKTQNILLDKHKMVVKIGDFGISKIL--SSKSKAYTVVGTPCYISPELCEGKPYNQ 180

Query: 127 KCDVYS 132
           K D+++
Sbjct: 181 KSDIWA 186

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 47.0 bits (112), Expect = 7e-07
 Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 13/135 (9%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           RL+G CL +    L+ + +  G L D   + R       +  L L   ++IA G++YL  
Sbjct: 73  RLLGICL-SSQVQLITQLMPLGCLLD---YVRNHKDNIGSQYL-LNWCVQIAKGMSYLE- 126

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR---GRVMGTFGYLPPEY 118
              + +V R++   N+L +     K+ DF  ++ +   E       G+V     ++  E 
Sbjct: 127 --EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKV--PIKWMALES 182

Query: 119 IATGDCNEKCDVYSF 133
           I       K DV+S+
Sbjct: 183 ILHRIYTHKSDVWSY 197

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 46.9 bits (111), Expect = 7e-07
 Identities = 43/134 (32%), Positives = 62/134 (46%), Gaps = 18/134 (13%)

Query: 5   GCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM---EIAYGIAYLHV 61
           G  L  E   +  EY   G+L D IYH   P  E       L+IA    E   G+AYLH 
Sbjct: 73  GSYLSREKLWICMEYCGGGSLQD-IYHVTGPLSE-------LQIAYVCRETLQGLAYLH- 123

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA- 120
             S+  + R++K +NIL  +    KL DF  +  I     + R   +GT  ++ PE  A 
Sbjct: 124 --SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAK-RKSFIGTPYWMAPEVAAV 180

Query: 121 --TGDCNEKCDVYS 132
              G  N+ CD+++
Sbjct: 181 EKNGGYNQLCDIWA 194

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 46.9 bits (111), Expect = 8e-07
 Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 18/148 (12%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYH--------PRQPNFEPVTC------SLRL 46
           +RL+G C++ +   ++ EY+E G L   +                 P  C      S  L
Sbjct: 82  IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLL 141

Query: 47  KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRG 105
            +A++IA G+ YL    S   V R++   N L  E    K+ DF  S ++  G+  RI+G
Sbjct: 142 HVALQIASGMKYLS---SLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQG 198

Query: 106 RVMGTFGYLPPEYIATGDCNEKCDVYSF 133
           R +    ++  E I  G      DV++F
Sbjct: 199 RAVLPIRWMAWECILMGKFTTASDVWAF 226

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 46.8 bits (111), Expect = 8e-07
 Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 15/135 (11%)

Query: 4   IGCCLETENPVLVF-EYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVA 62
           +G CL+ +N + +F E+V  G+++  I +   P  EPV C    K   +I  G+AYLH  
Sbjct: 68  LGTCLD-DNTISIFMEFVPGGSIS-SILNRFGPLPEPVFC----KYTKQILDGVAYLH-- 119

Query: 63  FSRPIVFRNVKPSNILFQEQSVAKLFDFSYSE-----SIPEGETRIRGRVMGTFGYLPPE 117
            +  +V R++K +N++     + KL DF  +       +    + +   + GT  ++ PE
Sbjct: 120 -NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPE 178

Query: 118 YIATGDCNEKCDVYS 132
            I       K D++S
Sbjct: 179 VINESGYGRKSDIWS 193

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 47.0 bits (111), Expect = 8e-07
 Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 10/119 (8%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           ++ EY+  G+  D +   R   F+    +  LK   EI  G+ YLH   S   + R++K 
Sbjct: 79  IIMEYLGGGSALDLL---RAGPFDEFQIATMLK---EILKGLDYLH---SEKKIHRDIKA 129

Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
           +N+L  EQ   KL DF  +  + + + + R   +GT  ++ PE I     + K D++S 
Sbjct: 130 ANVLLSEQGDVKLADFGVAGQLTDTQIK-RNTFVGTPFWMAPEVIQQSAYDSKADIWSL 187

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 46.5 bits (111), Expect = 9e-07
 Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH--VAFSRPIVFRNV 72
           +V EY E G LA  I   ++   + +      +I  ++   +   H        ++ R++
Sbjct: 78  IVMEYCEGGDLAQLIQKCKK-ERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDL 136

Query: 73  KPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYS 132
           KP+NI     +  KL DF  ++ +    +  +  V GT  Y+ PE +     +EK D++S
Sbjct: 137 KPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYV-GTPYYMSPEQLNHMSYDEKSDIWS 195

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 46.5 bits (110), Expect = 9e-07
 Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 7/133 (5%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L G C E     LVFE++E+G L+D +   R   F   T    L + +++  G+AYL 
Sbjct: 62  VQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRG-KFSQETL---LGMCLDVCEGMAYLE 117

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S  ++ R++   N L  E  V K+ DF  +  + + +            +  PE  +
Sbjct: 118 ---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFS 174

Query: 121 TGDCNEKCDVYSF 133
               + K DV+SF
Sbjct: 175 FSKYSSKSDVWSF 187

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 46.6 bits (111), Expect = 1e-06
 Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 19/136 (13%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM---EIAYGIAY 58
           + +G   E +N  +  E V  G+LA ++        EPV       I +   +I  G+ Y
Sbjct: 66  QYLGTEREEDNLYIFLELVPGGSLA-KLLKKYGSFPEPV-------IRLYTRQILLGLEY 117

Query: 59  LHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPE-GETRIRGRVMGTFGYLPPE 117
           LH    R  V R++K +NIL     V KL DF  ++ + E    +      G+  ++ PE
Sbjct: 118 LH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAK---SFKGSPYWMAPE 171

Query: 118 YIA-TGDCNEKCDVYS 132
            IA  G      D++S
Sbjct: 172 VIAQQGGYGLAADIWS 187

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 46.5 bits (110), Expect = 1e-06
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 8/103 (7%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LV   +  G L   IY+  +   E       +  + +I  GI +LH   S  IV+R++KP
Sbjct: 70  LVMSLMNGGDLKYHIYNVGERGLE---MERVIHYSAQITCGILHLH---SMDIVYRDMKP 123

Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPE 117
            N+L  +Q   +L D   +  + +G+T I  R  GT GY+ PE
Sbjct: 124 ENVLLDDQGNCRLSDLGLAVELKDGKT-ITQRA-GTNGYMAPE 164

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 46.3 bits (110), Expect = 1e-06
 Identities = 30/123 (24%), Positives = 59/123 (47%), Gaps = 18/123 (14%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           +V E++E G L D + H R  N E +       + + +   +++LH   ++ ++ R++K 
Sbjct: 93  VVMEFLEGGALTDIVTHTRM-NEEQIAT-----VCLAVLKALSFLH---AQGVIHRDIKS 143

Query: 75  SNILFQEQSVAKLFDFSY----SESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDV 130
            +IL       KL DF +    S+ +P      R  ++GT  ++ PE I+      + D+
Sbjct: 144 DSILLTSDGRVKLSDFGFCAQVSKEVPR-----RKSLVGTPYWMAPEVISRLPYGTEVDI 198

Query: 131 YSF 133
           +S 
Sbjct: 199 WSL 201

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 46.2 bits (110), Expect = 1e-06
 Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 9/88 (10%)

Query: 47  KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE--TRIR 104
           KIA+ +  G+ YLH      I+ R+VKPSNIL   +   KL DF  S     G+    + 
Sbjct: 104 KIAVAVLKGLTYLHE--KHKIIHRDVKPSNILVNSRGQIKLCDFGVS-----GQLVNSLA 156

Query: 105 GRVMGTFGYLPPEYIATGDCNEKCDVYS 132
              +GT  Y+ PE I   D + K D++S
Sbjct: 157 KTFVGTSSYMAPERIQGNDYSVKSDIWS 184

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 46.3 bits (110), Expect = 1e-06
 Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 8/109 (7%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L+ +YV  G L   +Y  R+ +F      +R+ IA EI   + +LH      I++R++K 
Sbjct: 82  LILDYVNGGELFTHLYQ-RE-HFT--ESEVRVYIA-EIVLALDHLH---QLGIIYRDIKL 133

Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
            NIL   +    L DF  S+     E        GT  Y+ PE I  G 
Sbjct: 134 ENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGS 182

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 45.9 bits (109), Expect = 2e-06
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 8/82 (9%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LVFE+V++  L D   +P   +   V      K   +I  GI + H   S  I+ R++KP
Sbjct: 77  LVFEFVDHTVLDDLEKYPNGLDESRVR-----KYLFQILRGIEFCH---SHNIIHRDIKP 128

Query: 75  SNILFQEQSVAKLFDFSYSESI 96
            NIL  +  V KL DF ++ ++
Sbjct: 129 ENILVSQSGVVKLCDFGFARTL 150

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 45.8 bits (109), Expect = 2e-06
 Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 10/139 (7%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLAD--RIYHPRQP----NFEPVTCSLRLKIAMEIAYG 55
           RL+G C       ++ EY+E G L    + +         N + ++ S  L +A +IA G
Sbjct: 83  RLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASG 142

Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
           + YL    S   V R++   N L  +    K+ DF  S ++   +  R++GR      ++
Sbjct: 143 MRYLE---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWM 199

Query: 115 PPEYIATGDCNEKCDVYSF 133
             E +  G    K DV++F
Sbjct: 200 AWESVLLGKFTTKSDVWAF 218

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 45.4 bits (107), Expect = 2e-06
 Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 10/132 (7%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           R  G  L+     ++ EY+  G+  D +    +P   P+  +    I  EI  G+ YLH 
Sbjct: 66  RYYGSYLKGTKLWIIMEYLGGGSALDLL----KPG--PLEETYIATILREILKGLDYLH- 118

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
             S   + R++K +N+L  EQ   KL DF  +  + + + + R   +GT  ++ PE I  
Sbjct: 119 --SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK-RNTFVGTPFWMAPEVIKQ 175

Query: 122 GDCNEKCDVYSF 133
              + K D++S 
Sbjct: 176 SAYDFKADIWSL 187

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 45.3 bits (108), Expect = 3e-06
 Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 10/76 (13%)

Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRG----- 105
           EI   + YLH   S  I+ R++KP NIL       KL DF  S+                
Sbjct: 101 EIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE 157

Query: 106 --RVMGTFGYLPPEYI 119
             R++GT  Y+ PE I
Sbjct: 158 DKRIVGTPDYIAPEVI 173

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 45.2 bits (107), Expect = 3e-06
 Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 16/132 (12%)

Query: 6   CCLETENPV-LVFEYVEYGTLADRIYHPRQ-PNF-EPVTCSLRLKIAMEIAYGIAYLHVA 62
            C +T + +  V EYV  G   D +YH +Q   F EP         A EIA G+ +LH  
Sbjct: 68  SCFQTMDRLYFVMEYVNGG---DLMYHIQQVGKFKEPHAVFY----AAEIAIGLFFLH-- 118

Query: 63  FSRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMGTFGYLPPEYIAT 121
            S+ I++R++K  N++   +   K+ DF    E+I  G+T       GT  Y+ PE IA 
Sbjct: 119 -SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKT--TRTFCGTPDYIAPEIIAY 175

Query: 122 GDCNEKCDVYSF 133
               +  D ++F
Sbjct: 176 QPYGKSVDWWAF 187

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 45.0 bits (107), Expect = 3e-06
 Identities = 41/137 (29%), Positives = 59/137 (43%), Gaps = 17/137 (12%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           RLIG C   E  +LV E    G L    Y  ++             +A ++A G+AYL  
Sbjct: 60  RLIGVCKG-EPLMLVMELAPLGPLLK--YLKKRREIPVSDLKE---LAHQVAMGMAYLE- 112

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLP-----P 116
             S+  V R++   N+L   +  AK+ DF  S ++  G    R     T G  P     P
Sbjct: 113 --SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRAT---TAGRWPLKWYAP 167

Query: 117 EYIATGDCNEKCDVYSF 133
           E I  G  + K DV+S+
Sbjct: 168 ECINYGKFSSKSDVWSY 184

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 45.0 bits (106), Expect = 3e-06
 Identities = 33/118 (27%), Positives = 47/118 (39%), Gaps = 8/118 (6%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LVFEYVE   L      P              K+   I   I  +H      IV R++KP
Sbjct: 77  LVFEYVEKNMLELLEEMP--------NGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKP 128

Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYS 132
            N+L     V KL DF ++ ++ EG        + T  Y  PE +      +  D++S
Sbjct: 129 ENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWS 186

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 45.0 bits (106), Expect = 3e-06
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 11/135 (8%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +R+IG C E E+ +LV E  E G L   +   +    + +T     ++  +++ G+ YL 
Sbjct: 59  VRMIGIC-EAESWMLVMELAELGPLNKFLQKNKHVTEKNIT-----ELVHQVSMGMKYLE 112

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPEY 118
                  V R++   N+L   Q  AK+ DF  S+++   E   + +  G +   +  PE 
Sbjct: 113 ---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPEC 169

Query: 119 IATGDCNEKCDVYSF 133
           +     + K DV+SF
Sbjct: 170 MNYYKFSSKSDVWSF 184

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 45.1 bits (107), Expect = 3e-06
 Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 25/132 (18%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           M L+  CL+               L  RI  P  P        +  K+ + I   + YL 
Sbjct: 93  MELMSTCLDK--------------LLKRIQGP-IPED------ILGKMTVAIVKALHYLK 131

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
                 ++ R+VKPSNIL       KL DF  S  + + + + R    G   Y+ PE I 
Sbjct: 132 EKHG--VIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSA--GCAAYMAPERID 187

Query: 121 TGDCNEKCDVYS 132
             D N K D+ +
Sbjct: 188 PPDPNPKYDIRA 199

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 44.8 bits (107), Expect = 3e-06
 Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 16/107 (14%)

Query: 15  LVFEYVEY---GTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
           +VFEY+++   G L        +   +     L L+       G+ YLH   S  I+ R+
Sbjct: 77  MVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQL-LE-------GLQYLH---SNGILHRD 125

Query: 72  VKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMGTFGYLPPE 117
           +K SNIL     V KL DF  +             RV+ T  Y PPE
Sbjct: 126 IKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVI-TLWYRPPE 171

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 44.8 bits (106), Expect = 4e-06
 Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 7/125 (5%)

Query: 10  TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
           T+ P+ ++ EY+E G+L D +   + P    +T +  + +A +IA G+A++     +  +
Sbjct: 71  TQEPIYIITEYMENGSLVDFL---KTPEGIKLTINKLIDMAAQIAEGMAFIER---KNYI 124

Query: 69  FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
            R+++ +NIL  E    K+ DF  +  I + E   R        +  PE I  G    K 
Sbjct: 125 HRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 184

Query: 129 DVYSF 133
           DV+SF
Sbjct: 185 DVWSF 189

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 45.1 bits (107), Expect = 4e-06
 Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 16/132 (12%)

Query: 6   CCLETENPV-LVFEYVEYGTLADRIYH-PRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVA 62
            C +T++ +  V EYV  G   D ++H  R   F EP         A EI  G+ +LH  
Sbjct: 63  SCFQTKDRLFFVMEYVNGG---DLMFHIQRSGRFDEPRA----RFYAAEIVLGLQFLH-- 113

Query: 63  FSRPIVFRNVKPSNILFQEQSVAKLFDFSYS-ESIPEGETRIRGRVMGTFGYLPPEYIAT 121
             R I++R++K  N+L   +   K+ DF    E I  G T       GT  Y+ PE ++ 
Sbjct: 114 -ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVT--TSTFCGTPDYIAPEILSY 170

Query: 122 GDCNEKCDVYSF 133
                  D ++ 
Sbjct: 171 QPYGPAVDWWAL 182

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 44.9 bits (106), Expect = 4e-06
 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 14/78 (17%)

Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF----SYSESIPEGETRIR 104
           A EI  G+ ++H  F   +V+R++KP+NIL  E    ++ D      +S+  P       
Sbjct: 103 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 155

Query: 105 GRVMGTFGYLPPEYIATG 122
              +GT GY+ PE +  G
Sbjct: 156 ---VGTHGYMAPEVLQKG 170

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 44.6 bits (105), Expect = 4e-06
 Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 24/139 (17%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LV E+   G++ D + + +    +    +    I  EI  G+A+LH      ++ R++K 
Sbjct: 96  LVMEFCGAGSVTDLVKNTKGNALKEDWIAY---ICREILRGLAHLHA---HKVIHRDIKG 149

Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFD 134
            N+L  E +  KL DF  S  +     R R   +GT  ++ PE IA   C+E  D  ++D
Sbjct: 150 QNVLLTENAEVKLVDFGVSAQLDRTVGR-RNTFIGTPYWMAPEVIA---CDENPDA-TYD 204

Query: 135 GSRDSGHLTGRAWYRSEDW 153
                        YRS+ W
Sbjct: 205 -------------YRSDIW 210

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 44.3 bits (104), Expect = 6e-06
 Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 10/119 (8%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           ++ EY+  G+  D +    +P   P+  +    I  EI  G+ YLH   S   + R++K 
Sbjct: 79  IIMEYLGGGSALDLL----EPG--PLDETQIATILREILKGLDYLH---SEKKIHRDIKA 129

Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
           +N+L  E    KL DF  +  + + + + R   +GT  ++ PE I     + K D++S 
Sbjct: 130 ANVLLSEHGEVKLADFGVAGQLTDTQIK-RNTFVGTPFWMAPEVIKQSAYDSKADIWSL 187

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 44.5 bits (105), Expect = 6e-06
 Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 6/86 (6%)

Query: 47  KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR 106
           +IA+ +  G+ YL   +S  I+ R+VKPSN+L   +   KL DF  S  +      I   
Sbjct: 99  RIAVAVVKGLTYL---WSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS---IAKT 152

Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYS 132
            +GT  Y+ PE I+        DV+S
Sbjct: 153 YVGTNAYMAPERISGEQYGIHSDVWS 178

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 44.2 bits (104), Expect = 7e-06
 Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 20/146 (13%)

Query: 3   LIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLR--------------LKI 48
           L+G   + +   ++FEY+  G L + +   R P+ + V CS                L I
Sbjct: 72  LLGVVTQEQPVCMLFEYLNQGDLHEFLIM-RSPHSD-VGCSSDEDGTVKSSLDHGDFLHI 129

Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRV 107
           A++IA G+ YL   F    V +++   NIL  EQ   K+ D   S  I   +  R++ + 
Sbjct: 130 AIQIAAGMEYLSSHF---FVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKS 186

Query: 108 MGTFGYLPPEYIATGDCNEKCDVYSF 133
           +    ++PPE I  G  +   D++SF
Sbjct: 187 LLPIRWMPPEAIMYGKFSSDSDIWSF 212

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 44.0 bits (104), Expect = 7e-06
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 9/82 (10%)

Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A EI   + YLH   S+ IV+R++KP NIL  ++   KL DF +++     + R R   +
Sbjct: 107 ASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAK-----KLRDRTWTL 158

Query: 109 -GTFGYLPPEYIATGDCNEKCD 129
            GT  YL PE I +   N+  D
Sbjct: 159 CGTPEYLAPEVIQSKGHNKAVD 180

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 43.7 bits (103), Expect = 8e-06
 Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 5/138 (3%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLR--LKIAMEIAYGIAY 58
           ++L+G CL  E   ++ E +E G L   +   R   F P   +L+  L I +++A G  Y
Sbjct: 62  VKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVY 121

Query: 59  LHVA--FSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYLP 115
           L       R +  RN   S   +    V K+ DF  +  I + +  R  G  +    ++ 
Sbjct: 122 LEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMA 181

Query: 116 PEYIATGDCNEKCDVYSF 133
           PE +  G    + DV+SF
Sbjct: 182 PESLLDGKFTTQSDVWSF 199

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 43.8 bits (103), Expect = 9e-06
 Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 8/120 (6%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           +V EY + G L  RI   R   F        L   ++I+ G+ ++H    R I+ R++K 
Sbjct: 76  IVMEYCDGGDLMKRINRQRGVLFSEDQI---LSWFVQISLGLKHIH---DRKILHRDIKS 129

Query: 75  SNILFQEQS-VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
            NI   +   VAKL DF  +  + +    +    +GT  YL PE       N K D++S 
Sbjct: 130 QNIFLSKNGMVAKLGDFGIARQLND-SMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSL 188

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 43.9 bits (103), Expect = 9e-06
 Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 11/120 (9%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LV E+   G++ D I + +    +    +    I  EI  G+++LH      ++ R++K 
Sbjct: 86  LVMEFCGAGSVTDLIKNTKGNTLKEEWIAY---ICREILRGLSHLH---QHKVIHRDIKG 139

Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCD-VYSF 133
            N+L  E +  KL DF  S  +     R R   +GT  ++ PE IA   C+E  D  Y F
Sbjct: 140 QNVLLTENAEVKLVDFGVSAQLDRTVGR-RNTFIGTPYWMAPEVIA---CDENPDATYDF 195

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 43.8 bits (103), Expect = 9e-06
 Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 10/135 (7%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +R+IG C E E  +LV E    G L   +   +    + +T S  +++  +++ G+ YL 
Sbjct: 58  VRMIGVC-EAEALMLVMEMASGGPLNKFLSGKK----DEITVSNVVELMHQVSMGMKYLE 112

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPEY 118
               +  V R++   N+L   Q  AK+ DF  S+++   ++  + R  G +   +  PE 
Sbjct: 113 ---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPEC 169

Query: 119 IATGDCNEKCDVYSF 133
           I     + + DV+S+
Sbjct: 170 INFRKFSSRSDVWSY 184

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 43.8 bits (104), Expect = 9e-06
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 11/67 (16%)

Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE---TRIRGRVMGTFG 112
             YLH   +R I++R++KP N+L       KL DF +++ +  G+   T       GT  
Sbjct: 106 FEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFC-----GTPE 157

Query: 113 YLPPEYI 119
           Y+ PE I
Sbjct: 158 YVAPEII 164

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 43.9 bits (103), Expect = 9e-06
 Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 9/139 (6%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
           +RL+G   + +  +++ E +  G L   +   R      P   P +    +++A EIA G
Sbjct: 72  VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADG 131

Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
           +AYL+   +   V R++   N +  E    K+ DF  +  I E +  R  G+ +    ++
Sbjct: 132 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 188

Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE +  G      DV+SF
Sbjct: 189 SPESLKDGVFTTYSDVWSF 207

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 43.9 bits (103), Expect = 1e-05
 Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 14/134 (10%)

Query: 5   GCCLE-TENPVLVF-EYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVA 62
           GC  +  E  + +F EY+  G++ D++       +  +T S+  K   +I  G++YLH  
Sbjct: 71  GCLRDRAEKTLTIFMEYMPGGSVKDQL-----KAYGALTESVTRKYTRQILEGMSYLH-- 123

Query: 63  FSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLPPEYI 119
            S  IV R++K +NIL       KL DF  S   ++I    T IR  V GT  ++ PE I
Sbjct: 124 -SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRS-VTGTPYWMSPEVI 181

Query: 120 ATGDCNEKCDVYSF 133
           +      K DV+S 
Sbjct: 182 SGEGYGRKADVWSL 195

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 43.6 bits (103), Expect = 1e-05
 Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 8/133 (6%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           +LIG C++ +   +V E V  G+L       R+         L L+++++ A G+ YL  
Sbjct: 56  KLIGVCVQKQPIYIVMELVPGGSLLT---FLRKKKNRLTVKKL-LQMSLDAAAGMEYLE- 110

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYLPPEYIA 120
             S+  + R++   N L  E +V K+ DF  S     G  T   G       +  PE + 
Sbjct: 111 --SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALN 168

Query: 121 TGDCNEKCDVYSF 133
            G    + DV+S+
Sbjct: 169 YGRYTSESDVWSY 181

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 43.6 bits (103), Expect = 1e-05
 Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 10/92 (10%)

Query: 47  KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR 106
           KIA+ I   + YLH   S  ++ R+VKPSN+L       KL DF  S  + +   +    
Sbjct: 107 KIAVSIVKALEYLHSKLS--VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTID- 163

Query: 107 VMGTFGYLPPEYIATGDCNE-----KCDVYSF 133
             G   Y+ PE I   + N+     K DV+S 
Sbjct: 164 -AGCKPYMAPERI-NPELNQKGYDVKSDVWSL 193

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 43.5 bits (102), Expect = 1e-05
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 14/78 (17%)

Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF----SYSESIPEGETRIR 104
           A EI  G+ ++H   +R +V+R++KP+NIL  E    ++ D      +S+  P       
Sbjct: 103 ATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 155

Query: 105 GRVMGTFGYLPPEYIATG 122
              +GT GY+ PE +  G
Sbjct: 156 ---VGTHGYMAPEVLQKG 170

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 43.5 bits (102), Expect = 1e-05
 Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 12/131 (9%)

Query: 5   GCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
           G  L  +   +  E+   G+L D IYH   P  E    S    ++ E   G+ YLH   S
Sbjct: 73  GSYLRRDKLWICMEFCGGGSLQD-IYHVTGPLSE----SQIAYVSRETLQGLYYLH---S 124

Query: 65  RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT--- 121
           +  + R++K +NIL  +    KL DF  S  I     + R   +GT  ++ PE  A    
Sbjct: 125 KGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAK-RKSFIGTPYWMAPEVAAVERK 183

Query: 122 GDCNEKCDVYS 132
           G  N+ CD+++
Sbjct: 184 GGYNQLCDIWA 194

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 43.5 bits (102), Expect = 1e-05
 Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 7/125 (5%)

Query: 10  TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
           T+ P+ ++ E++  G+L D      + + +P+     +  + +IA G+A++     R  +
Sbjct: 71  TKEPIYIITEFMAKGSLLD-FLKSDEGSKQPL--PKLIDFSAQIAEGMAFIE---QRNYI 124

Query: 69  FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
            R+++ +NIL     V K+ DF  +  I + E   R        +  PE I  G    K 
Sbjct: 125 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 184

Query: 129 DVYSF 133
           DV+SF
Sbjct: 185 DVWSF 189

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 43.5 bits (102), Expect = 1e-05
 Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 10/119 (8%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           +V E++E G L D + H R    +  T      + + +   ++YLH   ++ ++ R++K 
Sbjct: 96  VVMEFLEGGALTDIVTHTRMNEEQIAT------VCLSVLRALSYLH---NQGVIHRDIKS 146

Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
            +IL       KL DF +   + + E   R  ++GT  ++ PE I+      + D++S 
Sbjct: 147 DSILLTSDGRIKLSDFGFCAQVSK-EVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSL 204

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 20/108 (18%)

Query: 14  VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
            LVFE+++   L   I   ++   E +  S       ++  G+A+ H   S  I+ R++K
Sbjct: 74  YLVFEFMDT-DLYKLIKDRQRGLPESLIKS----YLYQLLQGLAFCH---SHGILHRDLK 125

Query: 74  PSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
           P N+L   + V KL DF  +            R  G+       Y+ T
Sbjct: 126 PENLLINTEGVLKLADFGLA------------RSFGSPVRPYTHYVVT 161

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 43.4 bits (103), Expect = 1e-05
 Identities = 39/132 (29%), Positives = 57/132 (43%), Gaps = 28/132 (21%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLK------IAMEIAYGIAYLHVAFSRPIV 68
           LV E    G++ D +   R+          RLK      I  E   G+AYLH      ++
Sbjct: 86  LVMELCGGGSVTDLVKGLRKKG-------KRLKEEWIAYILRETLRGLAYLH---ENKVI 135

Query: 69  FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNE-- 126
            R++K  NIL  + +  KL DF  S  +     R R   +GT  ++ PE IA   C+E  
Sbjct: 136 HRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGR-RNTFIGTPYWMAPEVIA---CDEQP 191

Query: 127 ------KCDVYS 132
                 + DV+S
Sbjct: 192 DASYDARSDVWS 203

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 43.2 bits (102), Expect = 1e-05
 Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 7/105 (6%)

Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMG 109
           EI+  + +LH    + I++R++KP NIL   Q   KL DF    ESI EG   +     G
Sbjct: 108 EISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT--VTHTFCG 162

Query: 110 TFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWK 154
           T  Y+ PE +      +  D +S  G+     LTG   + +E+ K
Sbjct: 163 TIEYMAPEILMRSGHGKAVDWWSL-GALMYDMLTGAPPFTAENRK 206

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 43.4 bits (102), Expect = 1e-05
 Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 13/142 (9%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ--------PNFEPVTCSLRLKIAMEI 52
           +RL+G C+  +   ++ EY+E G L ++    R+         N   V+ +  L +A++I
Sbjct: 80  IRLLGVCVSDDPLCMITEYMENGDL-NQFLSQREIESTFTHANNIPSVSIANLLYMAVQI 138

Query: 53  AYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTF 111
           A G+ YL    S   V R++   N L       K+ DF  S ++  G+  RI+GR +   
Sbjct: 139 ASGMKYLA---SLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPI 195

Query: 112 GYLPPEYIATGDCNEKCDVYSF 133
            ++  E I  G      DV++F
Sbjct: 196 RWMAWESILLGKFTTASDVWAF 217

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 43.1 bits (101), Expect = 2e-05
 Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 16/104 (15%)

Query: 42  CSLRLKIAMEIAY-------GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSE 94
           C  RL  AM I+Y       G+ +LH   +  I+ R+VK +NIL   +   KL DF  S 
Sbjct: 121 CGQRLDEAM-ISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTEGGVKLVDFGVSA 176

Query: 95  SIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRD 138
            +     R R   +GT  ++ PE IA   C ++ D YS+D   D
Sbjct: 177 QLTSTRLR-RNTSVGTPFWMAPEVIA---CEQQYD-YSYDARCD 215

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 43.1 bits (101), Expect = 2e-05
 Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 10/119 (8%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           +V E++E G L D + H R  N E +       + + +   ++ LH   ++ ++ R++K 
Sbjct: 94  VVMEFLEGGALTDIVTHTRM-NEEQIA-----AVCLAVLKALSVLH---AQGVIHRDIKS 144

Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
            +IL       KL DF +   + + E   R  ++GT  ++ PE I+      + D++S 
Sbjct: 145 DSILLTHDGRVKLSDFGFCAQVSK-EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSL 202

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 12/132 (9%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           +  G  L+     ++ EY   G+  D +        E         I  E+  G+ YLH 
Sbjct: 63  KYYGSFLKGSKLWIIMEYCGGGSCLDLL--KPGKLDETYIAF----ILREVLLGLEYLH- 115

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM-GTFGYLPPEYIA 120
                 + R++K +NIL  E+   KL DF  S  +    T  +     GT  ++ PE I 
Sbjct: 116 --EEGKIHRDIKAANILLSEEGDVKLADFGVSGQL--TSTMSKRNTFVGTPFWMAPEVIK 171

Query: 121 TGDCNEKCDVYS 132
               +EK D++S
Sbjct: 172 QSGYDEKADIWS 183

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 42.9 bits (101), Expect = 2e-05
 Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 12/118 (10%)

Query: 4   IGCCLETENPV-LVFEYVEYGTLADRIYH--PRQPNF-EPVTCSLRLKIAMEIAYGIAYL 59
           +    +T+  + LV   +  G L   IY+     P F EP  C        +I  G+ +L
Sbjct: 58  LAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFY----TAQIISGLEHL 113

Query: 60  HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPE 117
           H    R I++R++KP N+L       ++ D   +  + +G+++ +G   GT G++ PE
Sbjct: 114 H---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYA-GTPGFMAPE 167

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 42.5 bits (100), Expect = 2e-05
 Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+G C       ++ E++ YG L D +   R+ N + V   + L +A +I+  + YL 
Sbjct: 65  VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 121

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + R++   N L  E  + K+ DF  S  +                +  PE +A
Sbjct: 122 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 178

Query: 121 TGDCNEKCDVYSF 133
               + K DV++F
Sbjct: 179 YNKFSIKSDVWAF 191

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 42.5 bits (100), Expect = 2e-05
 Identities = 28/136 (20%), Positives = 62/136 (45%), Gaps = 12/136 (8%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +R++G   E  +  L  E++  G+++  +       +     ++ +    ++  G++YLH
Sbjct: 66  IRMLGATCEDSHFNLFVEWMAGGSVSHLLS-----KYGAFKEAVIINYTEQLLRGLSYLH 120

Query: 61  VAFSRPIVFRNVKPSNILFQEQS-VAKLFDFSYSESIPEGETR---IRGRVMGTFGYLPP 116
                 I+ R+VK +N+L        ++ DF  +  +    T     +G+++GT  ++ P
Sbjct: 121 ---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAP 177

Query: 117 EYIATGDCNEKCDVYS 132
           E +        CDV+S
Sbjct: 178 EVLRGEQYGRSCDVWS 193

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 42.7 bits (100), Expect = 2e-05
 Identities = 40/149 (26%), Positives = 60/149 (40%), Gaps = 26/149 (17%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEP-----------VTCSLRLKIA 49
           + L+G C       +  EY  YG L D +   R    +P           +T    L+ A
Sbjct: 66  INLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFA 125

Query: 50  MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMG 109
            ++A G+ YL     +  + R++   N+L  E   +K+ DF  S     GE      V  
Sbjct: 126 SDVATGMQYLS---EKQFIHRDLAARNVLVGENLASKIADFGLS----RGEEVY---VKK 175

Query: 110 TFGYLPPEYIATGDCN-----EKCDVYSF 133
           T G LP  ++A    N      K DV+SF
Sbjct: 176 TMGRLPVRWMAIESLNYSVYTTKSDVWSF 204

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 42.5 bits (100), Expect = 2e-05
 Identities = 40/130 (30%), Positives = 56/130 (43%), Gaps = 25/130 (19%)

Query: 6   CCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSL-RLKIAMEIAYGIAYLHVAF 63
           C  ET+  + +V EYVE G  A  +      N   +   + R+  A E    + YLH   
Sbjct: 68  CSFETKRHLCMVMEYVEGGDCATLL-----KNIGALPVDMARMYFA-ETVLALEYLH--- 118

Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYS------------ESIPEGETR--IRGRVMG 109
           +  IV R++KP N+L       KL DF  S            E   E +TR  +  +V G
Sbjct: 119 NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCG 178

Query: 110 TFGYLPPEYI 119
           T  Y+ PE I
Sbjct: 179 TPEYIAPEVI 188

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 42.6 bits (100), Expect = 2e-05
 Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 10/140 (7%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYH------PRQPNFEPVTCSLRLKIAMEIAY 54
           +RL+  C+ ++   ++ EY+E G L   +          + +   ++ S  + +A +IA 
Sbjct: 82  IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIAS 141

Query: 55  GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGY 113
           G+ YL    S   V R++   N L  +    K+ DF  S ++  G+  RI+GR +    +
Sbjct: 142 GMKYLS---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRW 198

Query: 114 LPPEYIATGDCNEKCDVYSF 133
           +  E I  G      DV++F
Sbjct: 199 MSWESILLGKFTTASDVWAF 218

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 42.6 bits (100), Expect = 2e-05
 Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 11/133 (8%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL+G  L      +V E +  G L + +   R      V+    L+ ++++A G+ YL 
Sbjct: 62  VRLLGVILH-NGLYIVMELMSKGNLVNFL---RTRGRALVSVIQLLQFSLDVAEGMEYLE 117

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ +V R++   NIL  E  VAK+ DF  +     G    +  V  T     PE + 
Sbjct: 118 ---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWT----APEALK 170

Query: 121 TGDCNEKCDVYSF 133
               + K DV+S+
Sbjct: 171 HKKFSSKSDVWSY 183

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 42.5 bits (100), Expect = 3e-05
 Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 6/72 (8%)

Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRV 107
           A EIA  + YLH   S  I++R++KP NIL   Q    L DF    E I   +T      
Sbjct: 102 AAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKT--TSTF 156

Query: 108 MGTFGYLPPEYI 119
            GT  YL PE +
Sbjct: 157 CGTPEYLAPEVL 168

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 42.5 bits (100), Expect = 3e-05
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)

Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
           E+A  + +LH   S  I++R++KP NIL  E+   KL DF  S+   + E +      GT
Sbjct: 106 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGT 161

Query: 111 FGYLPPEYIATGDCNEKCDVYSF 133
             Y+ PE +      +  D +SF
Sbjct: 162 VEYMAPEVVNRRGHTQSADWWSF 184

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 42.5 bits (101), Expect = 3e-05
 Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 12/78 (15%)

Query: 15  LVFEYVEYGTLAD-RIY-HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNV 72
           LVFEY +     D + Y   R     P   +L   I  ++  G+AY H   S  I+ R++
Sbjct: 75  LVFEYCDM----DLKKYLDKRPGPLSP---NLIKSIMYQLLRGLAYCH---SHRILHRDL 124

Query: 73  KPSNILFQEQSVAKLFDF 90
           KP NIL     V KL DF
Sbjct: 125 KPQNILINRDGVLKLADF 142

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 42.3 bits (99), Expect = 3e-05
 Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 10/129 (7%)

Query: 6   CCLET-ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
           C  +T EN   V EY+  G L   I    + +    T       A EI  G+ +LH   S
Sbjct: 63  CTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATF-----YAAEIICGLQFLH---S 114

Query: 65  RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC 124
           + IV+R++K  NIL       K+ DF   +    G+ +      GT  Y+ PE +     
Sbjct: 115 KGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKT-CTFCGTPDYIAPEILLGQKY 173

Query: 125 NEKCDVYSF 133
           N   D +SF
Sbjct: 174 NTSVDWWSF 182

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 42.1 bits (99), Expect = 3e-05
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 9/88 (10%)

Query: 7   CLETENPVLVF-EYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
              TE  + +F EYV  G++            E +          ++  G+AYLH   S+
Sbjct: 76  FETTEEYLSIFLEYVPGGSIG-SCLRTYGRFEEQLVRFF----TEQVLEGLAYLH---SK 127

Query: 66  PIVFRNVKPSNILFQEQSVAKLFDFSYS 93
            I+ R++K  N+L     + K+ DF  S
Sbjct: 128 GILHRDLKADNLLVDADGICKISDFGIS 155

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 42.1 bits (99), Expect = 4e-05
 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 7/69 (10%)

Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
           E+     YLH   S+ I++R++KP N+L   +   K+ DF +++ +P+    +     GT
Sbjct: 126 ELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTL----CGT 178

Query: 111 FGYLPPEYI 119
             YL PE I
Sbjct: 179 PEYLAPEVI 187

Length = 329

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 41.6 bits (97), Expect = 5e-05
 Identities = 41/139 (29%), Positives = 59/139 (42%), Gaps = 30/139 (21%)

Query: 5   GCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIA-------YGIA 57
           GC L      LV EY   G+ +D +   ++P  E           +EIA        G+A
Sbjct: 82  GCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQE-----------VEIAAVTHGALQGLA 129

Query: 58  YLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPE 117
           YLH   S  ++ R+VK  NIL  E  + KL DF  +  +           +GT  ++ PE
Sbjct: 130 YLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX-----FVGTPYWMAPE 181

Query: 118 YIAT---GDCNEKCDVYSF 133
            I     G  + K DV+S 
Sbjct: 182 VILAMDEGQYDGKVDVWSL 200

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 41.6 bits (97), Expect = 5e-05
 Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 16/122 (13%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM---EIAYGIAYLHVAFSRPIVFRN 71
           +V EY+  G+L D +           TC    +IA    E    + +LH   S  ++ R+
Sbjct: 94  VVMEYLAGGSLTDVVTE---------TCMDEGQIAAVCRECLQALEFLH---SNQVIHRD 141

Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
           +K  NIL       KL DF +   I   +++ R  ++GT  ++ PE +       K D++
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSTMVGTPYWMAPEVVTRKAYGPKVDIW 200

Query: 132 SF 133
           S 
Sbjct: 201 SL 202

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 41.4 bits (97), Expect = 5e-05
 Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 13/134 (9%)

Query: 4   IGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
           +G  L+ ++  +  EYV  G++A  +      N+     +L      +I  G+ YLH   
Sbjct: 72  LGSSLDADHLNIFLEYVPGGSVAALL-----NNYGAFEETLVRNFVRQILKGLNYLH--- 123

Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYSE-----SIPEGETRIRGRVMGTFGYLPPEY 118
           +R I+ R++K +NIL   +   K+ DF  S+     S+       R  + G+  ++ PE 
Sbjct: 124 NRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEV 183

Query: 119 IATGDCNEKCDVYS 132
           +       K D++S
Sbjct: 184 VKQTSYTRKADIWS 197

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 41.5 bits (97), Expect = 5e-05
 Identities = 29/71 (40%), Positives = 35/71 (49%), Gaps = 8/71 (11%)

Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESI-PEGETRIRGR 106
           A E+A  I YLH   S  I++R++KP NIL   Q    L DF    E + PE  T     
Sbjct: 102 AAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETT---ST 155

Query: 107 VMGTFGYLPPE 117
             GT  YL PE
Sbjct: 156 FCGTPEYLAPE 166

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 41.5 bits (97), Expect = 6e-05
 Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 14/133 (10%)

Query: 5   GCCLE-TENPVLVF-EYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVA 62
           GC  +  E  + +F EY+  G++ D++       +  +T ++  +   +I  G++YLH  
Sbjct: 71  GCLRDPEEKKLSIFVEYMPGGSIKDQL-----KAYGALTENVTRRYTRQILQGVSYLH-- 123

Query: 63  FSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLPPEYI 119
            S  IV R++K +NIL       KL DF  S   ++I    T I+  V GT  ++ PE I
Sbjct: 124 -SNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKS-VTGTPYWMSPEVI 181

Query: 120 ATGDCNEKCDVYS 132
           +      K DV+S
Sbjct: 182 SGEGYGRKADVWS 194

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 41.4 bits (97), Expect = 6e-05
 Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 16/122 (13%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM---EIAYGIAYLHVAFSRPIVFRN 71
           +V EY+  G+L D +           TC    +IA    E    + +LH   S  ++ R+
Sbjct: 93  VVMEYLAGGSLTDVVTE---------TCMDEGQIAAVCRECLQALEFLH---SNQVIHRD 140

Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
           +K  NIL       KL DF +   I   E   R  ++GT  ++ PE +       K D++
Sbjct: 141 IKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIW 199

Query: 132 SF 133
           S 
Sbjct: 200 SL 201

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 41.7 bits (98), Expect = 6e-05
 Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 20/104 (19%)

Query: 46  LKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL----------------FQEQSVAKLFD 89
           L I  +I   I Y+H   S+ ++ R++KP NIL                F++     L D
Sbjct: 116 LSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLD 172

Query: 90  FSYS-ESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYS 132
                 +I      I G+++GT  Y+ PE +     +E  D+Y+
Sbjct: 173 IDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYA 216

Length = 932

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 41.2 bits (97), Expect = 6e-05
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 8/79 (10%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LVFEY ++  L +   +PR      +      KI  +    + + H       + R+VKP
Sbjct: 77  LVFEYCDHTVLNELEKNPRGVPEHLIK-----KIIWQTLQAVNFCH---KHNCIHRDVKP 128

Query: 75  SNILFQEQSVAKLFDFSYS 93
            NIL  +Q   KL DF ++
Sbjct: 129 ENILITKQGQIKLCDFGFA 147

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 41.5 bits (97), Expect = 7e-05
 Identities = 42/133 (31%), Positives = 60/133 (45%), Gaps = 18/133 (13%)

Query: 5   GCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
           GC L+     LV EY   G+ +D +   ++P  E    +    I      G+AYLH   S
Sbjct: 88  GCYLKEHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAA----ITHGALQGLAYLH---S 139

Query: 65  RPIVFRNVKPSNILFQEQSVAKLFDF-SYSESIPEGETRIRGRVMGTFGYLPPEYIAT-- 121
             ++ R++K  NIL  E    KL DF S S+S P          +GT  ++ PE I    
Sbjct: 140 HNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANS------FVGTPYWMAPEVILAMD 193

Query: 122 -GDCNEKCDVYSF 133
            G  + K DV+S 
Sbjct: 194 EGQYDGKVDVWSL 206

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 41.8 bits (98), Expect = 7e-05
 Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 14/133 (10%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++LIG C   +   L+ EY+E   L++ +   R  ++E      R KIA+ IA  + +LH
Sbjct: 746 VKLIGLCRSEKGAYLIHEYIEGKNLSEVL---RNLSWER-----RRKIAIGIAKALRFLH 797

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S  +V  N+ P  I+   +    L       S+P G      +   +  Y+ PE   
Sbjct: 798 CRCSPAVVVGNLSPEKIIIDGKDEPHL-----RLSLP-GLLCTDTKCFISSAYVAPETRE 851

Query: 121 TGDCNEKCDVYSF 133
           T D  EK D+Y F
Sbjct: 852 TKDITEKSDIYGF 864

Length = 968

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 41.2 bits (96), Expect = 8e-05
 Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 22/141 (15%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLAD--------RIYHPRQPNFEPVTCSLRLKIAMEI 52
           +RL     + E   ++ EY+  G+L D        ++  P+  +F           + +I
Sbjct: 64  VRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDF-----------SAQI 112

Query: 53  AYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFG 112
           A G+AY+     +  + R+++ +N+L  E  + K+ DF  +  I + E   R        
Sbjct: 113 AEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK 169

Query: 113 YLPPEYIATGDCNEKCDVYSF 133
           +  PE I  G    K DV+SF
Sbjct: 170 WTAPEAINFGSFTIKSDVWSF 190

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 41.2 bits (96), Expect = 8e-05
 Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 16/122 (13%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM---EIAYGIAYLHVAFSRPIVFRN 71
           +V EY+  G+L D +           TC    +IA    E    + +LH   +  ++ R+
Sbjct: 93  VVMEYLAGGSLTDVVTE---------TCMDEAQIAAVCRECLQALEFLH---ANQVIHRD 140

Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
           +K  N+L       KL DF +   I   +++ R  ++GT  ++ PE +       K D++
Sbjct: 141 IKSDNVLLGMDGSVKLTDFGFCAQITPEQSK-RSTMVGTPYWMAPEVVTRKAYGPKVDIW 199

Query: 132 SF 133
           S 
Sbjct: 200 SL 201

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 40.7 bits (95), Expect = 1e-04
 Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
           +RL+G   + +  ++V E + +G L   +   R      P   P T    +++A EIA G
Sbjct: 72  VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 131

Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
           +AYL+   ++  V R++   N +       K+ DF  +  I E +  R  G+ +    ++
Sbjct: 132 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 188

Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE +  G      D++SF
Sbjct: 189 APESLKDGVFTTSSDMWSF 207

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 40.9 bits (95), Expect = 1e-04
 Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 16/122 (13%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM---EIAYGIAYLHVAFSRPIVFRN 71
           +V EY+  G+L D +           TC    +IA    E    + +LH   S  ++ R+
Sbjct: 93  VVMEYLAGGSLTDVVTE---------TCMDEGQIAAVCRECLQALDFLH---SNQVIHRD 140

Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
           +K  NIL       KL DF +   I   +++ R  ++GT  ++ PE +       K D++
Sbjct: 141 IKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSTMVGTPYWMAPEVVTRKAYGPKVDIW 199

Query: 132 SF 133
           S 
Sbjct: 200 SL 201

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 40.8 bits (95), Expect = 1e-04
 Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 17/150 (11%)

Query: 7   CLETENPV-LVFEYVEYGTLADRIYHPRQPNF--EPVTCSLRLKIAMEIAYGIAYLHVAF 63
           C +T + +  V EYV  G   D +Y  +Q     EP      +  A EIA G+ +LH   
Sbjct: 69  CFQTMDRLYFVMEYVNGG---DLMYQIQQVGRFKEPHA----VFYAAEIAIGLFFLH--- 118

Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMGTFGYLPPEYIATG 122
           S+ I++R++K  N++   +   K+ DF    E++ +G T       GT  Y+ PE IA  
Sbjct: 119 SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVT--TKTFCGTPDYIAPEIIAYQ 176

Query: 123 DCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
              +  D ++F G      L G+A +  ED
Sbjct: 177 PYGKSVDWWAF-GVLLYEMLAGQAPFEGED 205

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 40.5 bits (95), Expect = 1e-04
 Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 9/120 (7%)

Query: 15  LVFEYVEYGTLADRIYHPRQPN--FEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNV 72
           +V E  + G L+  I H ++        T     K  +++   + ++H   S+ I+ R++
Sbjct: 79  IVLELADAGDLSRMIKHFKKQKRLIPERTI---WKYFVQLCSALEHMH---SKRIMHRDI 132

Query: 73  KPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYS 132
           KP+N+      V KL D           T     V GT  Y+ PE I     N K D++S
Sbjct: 133 KPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPERIHENGYNFKSDIWS 191

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 40.5 bits (94), Expect = 1e-04
 Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 16/132 (12%)

Query: 5   GCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
           GC L      LV EY   G+ +D +   ++P  + V  +     A++   G+AYLH   S
Sbjct: 92  GCYLREHTAWLVMEYC-LGSASDLLEVHKKP-LQEVEIAAITHGALQ---GLAYLH---S 143

Query: 65  RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT--- 121
             ++ R++K  NIL  E    KL DF  +       +      +GT  ++ PE I     
Sbjct: 144 HNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANS-----FVGTPYWMAPEVILAMDE 198

Query: 122 GDCNEKCDVYSF 133
           G  + K DV+S 
Sbjct: 199 GQYDGKVDVWSL 210

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 40.3 bits (94), Expect = 1e-04
 Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 12/114 (10%)

Query: 6   CCLET-ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
           CC +T +    V E+V  G L   I   R+ + E          A EI   + +LH    
Sbjct: 63  CCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD-EARARFY----AAEITSALMFLH---D 114

Query: 65  RPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMGTFGYLPPE 117
           + I++R++K  N+L   +   KL DF    E I  G+T       GT  Y+ PE
Sbjct: 115 KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKT--TSTFCGTPDYIAPE 166

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 40.4 bits (94), Expect = 1e-04
 Identities = 30/73 (41%), Positives = 36/73 (49%), Gaps = 8/73 (10%)

Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESI-PEGETRIRGR 106
           A EIA  + YLH   S  IV+R++KP NIL   Q    L DF    E+I   G T     
Sbjct: 102 AAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTT---ST 155

Query: 107 VMGTFGYLPPEYI 119
             GT  YL PE +
Sbjct: 156 FCGTPEYLAPEVL 168

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 8/67 (11%)

Query: 55  GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF----SYSESIPEGETRIRGRVMGT 110
           G+ Y+H      I+ R++K +NIL  +  + KL DF    ++S S      R   RV+ T
Sbjct: 131 GLYYIH---RNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVV-T 186

Query: 111 FGYLPPE 117
             Y PPE
Sbjct: 187 LWYRPPE 193

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 40.4 bits (94), Expect = 2e-04
 Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 5/86 (5%)

Query: 47  KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR 106
           K+++ +  G+AYL       I+ R+VKPSNIL   +   KL DF  S  + +    +   
Sbjct: 107 KVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 161

Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYS 132
            +GT  Y+ PE +     + + D++S
Sbjct: 162 FVGTRSYMSPERLQGTHYSVQSDIWS 187

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 11/129 (8%)

Query: 5   GCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
           G  L+     ++ EY E G++  R      P  E         I  E+   + Y+H    
Sbjct: 69  GSYLKGPRLWIIMEYAEGGSV--RTLMKAGPIAEKYISV----IIREVLVALKYIH---K 119

Query: 65  RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC 124
             ++ R++K +NIL       KL DF  +  + +  ++ R   +GT  ++ PE I  G  
Sbjct: 120 VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSK-RSTFVGTPYWMAPEVITEGKY 178

Query: 125 -NEKCDVYS 132
            + K D++S
Sbjct: 179 YDTKADIWS 187

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 40.1 bits (93), Expect = 2e-04
 Identities = 41/149 (27%), Positives = 60/149 (40%), Gaps = 26/149 (17%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPV---------TCSLR--LKIA 49
           + L+G C       L  EY  +G L D +   R    +P          T S +  L  A
Sbjct: 59  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 118

Query: 50  MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMG 109
            ++A G+ YL     +  + R++   NIL  E  VAK+ DF  S     G+      V  
Sbjct: 119 ADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLS----RGQEVY---VKK 168

Query: 110 TFGYLPPEYIATGDCN-----EKCDVYSF 133
           T G LP  ++A    N        DV+S+
Sbjct: 169 TMGRLPVRWMAIESLNYSVYTTNSDVWSY 197

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 40.0 bits (93), Expect = 2e-04
 Identities = 30/72 (41%), Positives = 36/72 (50%), Gaps = 6/72 (8%)

Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRV 107
           A EIA  + YLH   S  IV+R++KP NIL   Q    L DF    E I + +T      
Sbjct: 102 AAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTT--TF 156

Query: 108 MGTFGYLPPEYI 119
            GT  YL PE I
Sbjct: 157 CGTPEYLAPEVI 168

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 39.6 bits (92), Expect = 2e-04
 Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 14/133 (10%)

Query: 5   GCCLETENPVL--VFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVA 62
           GC  +     L    E++  G++ D++      ++  +T ++  K   +I  G++YLH  
Sbjct: 71  GCLRDPMERTLSIFMEHMPGGSIKDQL-----KSYGALTENVTRKYTRQILEGVSYLH-- 123

Query: 63  FSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLPPEYI 119
            S  IV R++K +NIL       KL DF  S   ++I    T ++  V GT  ++ PE I
Sbjct: 124 -SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKS-VTGTPYWMSPEVI 181

Query: 120 ATGDCNEKCDVYS 132
           +      K D++S
Sbjct: 182 SGEGYGRKADIWS 194

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 39.4 bits (92), Expect = 3e-04
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 12/130 (9%)

Query: 6   CCLET-ENPVLVFEYVEYGTLADRIYHPRQP-NFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
           C  +T E+   V EY+  G   D ++H +    F+          A EI  G+ +LH   
Sbjct: 63  CTFQTKEHLFFVMEYLNGG---DLMFHIQSSGRFDEARARF---YAAEIICGLQFLH--- 113

Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
            + I++R++K  N+L  +    K+ DF   +    GE +      GT  Y+ PE +    
Sbjct: 114 KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKA-STFCGTPDYIAPEILKGQK 172

Query: 124 CNEKCDVYSF 133
            NE  D +SF
Sbjct: 173 YNESVDWWSF 182

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 39.2 bits (91), Expect = 3e-04
 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 3/73 (4%)

Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
           EI   + +LH      I++R++K  NIL        L DF  S+   E E        GT
Sbjct: 113 EIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGT 169

Query: 111 FGYLPPEYIATGD 123
             Y+ P+ +  GD
Sbjct: 170 IEYMAPDIVRGGD 182

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 39.2 bits (91), Expect = 3e-04
 Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 16/118 (13%)

Query: 7   CLETENPV-LVFEYVEYGTLADRIYHPRQPNF--EPVTCSLRLKIAMEIAYGIAYLHVAF 63
           C +T + +  V EYV  G   D +YH +Q     EP      +  A EI+ G+ +LH   
Sbjct: 69  CFQTVDRLYFVMEYVNGG---DLMYHIQQVGKFKEPQA----VFYAAEISVGLFFLH--- 118

Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMGTFGYLPPEYIA 120
            R I++R++K  N++   +   K+ DF    E + +G T       GT  Y+ PE IA
Sbjct: 119 RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVT--TRTFCGTPDYIAPEIIA 174

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 39.2 bits (92), Expect = 3e-04
 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 8/80 (10%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L+F+Y E+      I   RQ     +  S+   +  +I  G+ YLH   S  ++ R++KP
Sbjct: 81  LLFDYAEHDLWQ-IIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKP 136

Query: 75  SNIL----FQEQSVAKLFDF 90
           +NIL      E+ V K+ D 
Sbjct: 137 ANILVMGEGPERGVVKIGDL 156

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 39.0 bits (91), Expect = 4e-04
 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 11/122 (9%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LV EY+ YG+L D +    Q + E +     L  A +I  G+ YL    S+  V R++  
Sbjct: 84  LVMEYLPYGSLRDYL----QKHRERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLAT 136

Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMG---TFGYLPPEYIATGDCNEKCDVY 131
            NIL + ++  K+ DF  ++ +P+ +   + R  G    F Y  PE +     +   DV+
Sbjct: 137 RNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWY-APESLTESKFSVASDVW 195

Query: 132 SF 133
           SF
Sbjct: 196 SF 197

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 38.8 bits (90), Expect = 4e-04
 Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 9/91 (9%)

Query: 48  IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRV 107
           I  E   G+ +LHV      + R+VK +NIL   +   KL DF  S  +     R R   
Sbjct: 129 ILHEALMGLQHLHV---NKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLR-RNTS 184

Query: 108 MGTFGYLPPEYIAT-----GDCNEKCDVYSF 133
           +GT  ++ PE IA         + +CDV+S 
Sbjct: 185 VGTPFWMAPEVIACEQQLDSTYDARCDVWSL 215

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 38.9 bits (91), Expect = 4e-04
 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 10/77 (12%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEP-VTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
           LV EY E   LA  + +   P  E  V C     + +++  G+ YLH  F   I+ R++K
Sbjct: 85  LVMEYCEQ-DLASLLDNMPTPFSESQVKC-----LMLQLLRGLQYLHENF---IIHRDLK 135

Query: 74  PSNILFQEQSVAKLFDF 90
            SN+L  ++   K+ DF
Sbjct: 136 VSNLLLTDKGCLKIADF 152

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 39.0 bits (91), Expect = 4e-04
 Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 20/131 (15%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           +L G C+  EN ++V EYV++G L   ++  R+ N   V+   +L +A ++A  + YL  
Sbjct: 65  KLYGVCVRDEN-IMVEEYVKFGPL--DVFLHREKN--NVSLHWKLDVAKQLASALHYLE- 118

Query: 62  AFSRPIVFRNVKPSNILFQEQSV-------AKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
              + +V  NV   NIL     +        KL D     ++   E R+         ++
Sbjct: 119 --DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVE-----RIPWI 171

Query: 115 PPEYIATGDCN 125
            PE I  G  +
Sbjct: 172 APECIRNGQAS 182

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 38.9 bits (90), Expect = 5e-04
 Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 7/120 (5%)

Query: 15  LVFEYVEYGTLADRIYH-PRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
           +V E  + G L+  I H  +Q    P       K  +++   + ++H   SR ++ R++K
Sbjct: 79  IVLELADAGDLSRMIKHFKKQKRLIPEKTVW--KYFVQLCSALEHMH---SRRVMHRDIK 133

Query: 74  PSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
           P+N+      V KL D           T     V GT  Y+ PE I     N K D++S 
Sbjct: 134 PANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPERIHENGYNFKSDIWSL 192

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 38.9 bits (90), Expect = 5e-04
 Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 7/125 (5%)

Query: 10  TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
           +E P+ +V E++  G+L D +   ++ + + +     + +A +IA G+AY+        +
Sbjct: 71  SEEPIYIVTEFMGKGSLLDFL---KEGDGKYLKLPQLVDMAAQIADGMAYIE---RMNYI 124

Query: 69  FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
            R+++ +NIL  +  V K+ DF  +  I + E   R        +  PE    G    K 
Sbjct: 125 HRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 184

Query: 129 DVYSF 133
           DV+SF
Sbjct: 185 DVWSF 189

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 38.5 bits (90), Expect = 5e-04
 Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 10/134 (7%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHP--RQPNFEPVTCSLRLKIAMEIAYGIAYL 59
           +L   C E E   +V EY+  G+L D +     ++     +     + +A +IA G+AYL
Sbjct: 65  QLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQL-----VDMAAQIAEGMAYL 119

Query: 60  HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
               SR  + R++   NIL  E  V K+ DF  +  I + E   R        +  PE  
Sbjct: 120 E---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAA 176

Query: 120 ATGDCNEKCDVYSF 133
             G    K DV+SF
Sbjct: 177 NYGRFTIKSDVWSF 190

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 38.5 bits (90), Expect = 5e-04
 Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 14/107 (13%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNF-----------EPVTCSLRLKIA 49
           + L+G C +     +V EY  +G L D +   R P             E +T    +  A
Sbjct: 79  INLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFA 138

Query: 50  MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI 96
            ++A G+ +L    S+  + R++   N+L  E  V K+ DF  +  I
Sbjct: 139 YQVARGMEFLA---SKKCIHRDLAARNVLVTEDHVMKIADFGLARDI 182

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 38.5 bits (89), Expect = 6e-04
 Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 5/86 (5%)

Query: 47  KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR 106
           K+++ +  G+ YL       I+ R+VKPSNIL   +   KL DF  S  + +    +   
Sbjct: 107 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 161

Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYS 132
            +GT  Y+ PE +     + + D++S
Sbjct: 162 FVGTRSYMSPERLQGTHYSVQSDIWS 187

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 38.4 bits (90), Expect = 6e-04
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 9/77 (11%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM-EIAYGIAYLHVAFSRPIVFRNVK 73
           LVFE+V+   LA  +    +P   P T    +K  M ++  G+ +LH   S  IV R++K
Sbjct: 83  LVFEHVDQ-DLATYLSKCPKPGLPPET----IKDLMRQLLRGVDFLH---SHRIVHRDLK 134

Query: 74  PSNILFQEQSVAKLFDF 90
           P NIL       K+ DF
Sbjct: 135 PQNILVTSDGQVKIADF 151

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 38.5 bits (89), Expect = 7e-04
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)

Query: 10  TENPV-LVFEYVEYGTLADRI-----YHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
           +E P+ +V EY+  G+L D +      + R P          + +A +IA G+AY+    
Sbjct: 71  SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL--------VDMAAQIASGMAYVE--- 119

Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
               V R+++ +NIL  E  V K+ DF  +  I + E   R        +  PE    G 
Sbjct: 120 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 179

Query: 124 CNEKCDVYSF 133
              K DV+SF
Sbjct: 180 FTIKSDVWSF 189

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 38.2 bits (89), Expect = 7e-04
 Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 30/138 (21%)

Query: 5   GCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIA-------YGIA 57
           GC L      LV EY   G+ +D +   ++P  E           +EIA        G+A
Sbjct: 82  GCYLREHTAWLVMEYC-LGSASDILEVHKKPLQE-----------VEIAAICHGALQGLA 129

Query: 58  YLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPE 117
           YLH   S   + R++K  NIL  E    KL DF  +  +    + +     GT  ++ PE
Sbjct: 130 YLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFV-----GTPYWMAPE 181

Query: 118 YIAT---GDCNEKCDVYS 132
            I     G  + K DV+S
Sbjct: 182 VILAMDEGQYDGKVDVWS 199

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 38.2 bits (89), Expect = 7e-04
 Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 17/100 (17%)

Query: 48  IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFS---------YSESIPE 98
           I ++I  G+  LH       + R++ P+NI    + + K+ DF          YS+++ +
Sbjct: 124 ILLQILNGLNVLH---KWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSK 180

Query: 99  GETRIRGRVMG----TFGYLPPEYIATGDC-NEKCDVYSF 133
            ET  R   M     T  Y  PE +   +  +   D++S 
Sbjct: 181 DETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSV 220

Length = 335

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 38.4 bits (89), Expect = 8e-04
 Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 32/152 (21%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEP-----------VTCSLRLKIA 49
           + L+G C       L  EY  +G L D +   R    +P           ++    L  A
Sbjct: 71  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 130

Query: 50  MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR--- 106
            ++A G+ YL     +  + R++   NIL  E  VAK+ DF  S          RG+   
Sbjct: 131 ADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLS----------RGQEVY 177

Query: 107 VMGTFGYLPPEYIATGDCN-----EKCDVYSF 133
           V  T G LP  ++A    N        DV+S+
Sbjct: 178 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY 209

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 38.1 bits (88), Expect = 8e-04
 Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 7/120 (5%)

Query: 15  LVFEYVEYGTLADRI-YHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
           +V E  + G L+  I Y  +Q    P       K  +++   + ++H   SR ++ R++K
Sbjct: 79  IVLELADAGDLSQMIKYFKKQKRLIPERTVW--KYFVQLCSAVEHMH---SRRVMHRDIK 133

Query: 74  PSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
           P+N+      V KL D          +T     ++GT  Y+ PE I     N K D++S 
Sbjct: 134 PANVFITATGVVKLGDLGLGRFF-SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSL 192

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 38.3 bits (89), Expect = 8e-04
 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 4/87 (4%)

Query: 47  KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR 106
            I +++   + YLH    + IV R++ P+NI+  E     + DF  ++   +        
Sbjct: 117 NIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQ--KQPESKLTS 172

Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
           V+GT  Y  PE +      EK DV++F
Sbjct: 173 VVGTILYSCPEIVKNEPYGEKADVWAF 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 38.1 bits (88), Expect = 8e-04
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 15/106 (14%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM-EIAYGIAYLHVAFSRPIVFRNVK 73
           LVFEY+      D        N   +     +KI M ++  G++Y H    R I+ R++K
Sbjct: 80  LVFEYL------DSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLK 130

Query: 74  PSNILFQEQSVAKLFDF--SYSESIPEGETRIRGRVMGTFGYLPPE 117
           P N+L  E+   KL DF  + ++S+P   T+     + T  Y PP+
Sbjct: 131 PQNLLINEKGELKLADFGLARAKSVP---TKTYSNEVVTLWYRPPD 173

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 37.9 bits (89), Expect = 8e-04
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 4/63 (6%)

Query: 55  GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
           G+ YLH   S  I+ R++KP+N+L     V KL DF  + S      ++  +V+ T  Y 
Sbjct: 114 GLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVV-TRWYR 169

Query: 115 PPE 117
            PE
Sbjct: 170 APE 172

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 38.0 bits (88), Expect = 9e-04
 Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 8/71 (11%)

Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF--SYSESIPEGETRIRGRVM 108
           +I  G+AY H    R ++ R++KP N+L  E+   KL DF  + ++S+P   T+     +
Sbjct: 112 QILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVP---TKTYSNEV 165

Query: 109 GTFGYLPPEYI 119
            T  Y PP+ +
Sbjct: 166 VTLWYRPPDVL 176

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 38.1 bits (88), Expect = 9e-04
 Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 12/119 (10%)

Query: 7   CLETENPVL-VFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
           C +TE+ +  V EYV  G   D ++H ++    P   + R   A EI+  + YLH    R
Sbjct: 64  CFQTESRLFFVIEYVNGG---DLMFHMQRQRKLPEEHA-RFYSA-EISLALNYLH---ER 115

Query: 66  PIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
            I++R++K  N+L   +   KL D+    E +  G+T       GT  Y+ PE +   D
Sbjct: 116 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNYIAPEILRGED 172

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 37.9 bits (88), Expect = 0.001
 Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 7/132 (5%)

Query: 3   LIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVA 62
           L+G C      +++ EY  YG L + +   ++ +F  +T    L  + ++A G+A+L   
Sbjct: 104 LLGACTIGGPILVITEYCCYGDLLNFL-RRKRESF--LTLEDLLSFSYQVAKGMAFLA-- 158

Query: 63  FSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRI-RGRVMGTFGYLPPEYIAT 121
            S+  + R++   N+L     + K+ DF  +  I      + +G       ++ PE I  
Sbjct: 159 -SKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFN 217

Query: 122 GDCNEKCDVYSF 133
                + DV+S+
Sbjct: 218 CVYTFESDVWSY 229

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 37.8 bits (87), Expect = 0.001
 Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 13/111 (11%)

Query: 11  ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFR 70
           E   LVFEYV          HP      P    L L    ++  G++Y+H    R I+ R
Sbjct: 76  ETLTLVFEYVHTDLCQYMDKHP--GGLHPENVKLFL---FQLLRGLSYIH---QRYILHR 127

Query: 71  NVKPSNILFQEQSVAKLFDF--SYSESIPEGETRIRGRVMGTFGYLPPEYI 119
           ++KP N+L  +    KL DF  + ++S+P   +      + T  Y PP+ +
Sbjct: 128 DLKPQNLLISDTGELKLADFGLARAKSVP---SHTYSNEVVTLWYRPPDVL 175

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 37.3 bits (87), Expect = 0.001
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 16/82 (19%)

Query: 55  GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF----SYSESIP-------EGETRI 103
           GI YLH      I+ R++K +NIL   Q + K+ DF     Y    P        G  + 
Sbjct: 127 GINYLH---ENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKY 183

Query: 104 RGRVMGTFGYLPPEYIATGDCN 125
              V+ T  Y PPE +  G+  
Sbjct: 184 TNLVV-TRWYRPPELLL-GERR 203

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 37.2 bits (86), Expect = 0.001
 Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 7/82 (8%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L+ E++  G+L +  Y PR  N   +    +LK A++I  G+ YL    SR  V R++  
Sbjct: 85  LIMEFLPSGSLKE--YLPRNKN--KINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAA 137

Query: 75  SNILFQEQSVAKLFDFSYSESI 96
            N+L + +   K+ DF  +++I
Sbjct: 138 RNVLVESEHQVKIGDFGLTKAI 159

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 37.4 bits (87), Expect = 0.001
 Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 14/112 (12%)

Query: 9   ETENPVLVFEYVE---YGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
           +     LVFEY++    G L   + H  + +      S  +K  +E   G+ Y H    +
Sbjct: 87  DKGAFYLVFEYMDHDLMGLLESGLVHFSEDH----IKSF-MKQLLE---GLNYCH---KK 135

Query: 66  PIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPE 117
             + R++K SNIL   +   KL DF  +      E+R     + T  Y PPE
Sbjct: 136 NFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPE 187

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 37.4 bits (87), Expect = 0.002
 Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 17/138 (12%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           + L   C   E   ++ E +E G+L   +   R P  + +  +  + +A ++A G+AYL 
Sbjct: 65  ISLFAVCSVGEPVYIITELMEKGSLLAFL---RSPEGQVLPVASLIDMACQVAEGMAYLE 121

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPE-----GETRIRGRVMGTFGYLP 115
               +  + R++   NIL  E  V K+ DF  +  I E      + +I       + +  
Sbjct: 122 ---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKI------PYKWTA 172

Query: 116 PEYIATGDCNEKCDVYSF 133
           PE  + G  + K DV+SF
Sbjct: 173 PEAASHGTFSTKSDVWSF 190

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 37.3 bits (86), Expect = 0.002
 Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 14/125 (11%)

Query: 11  ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFR 70
           E    VFEY+        I HP      P   ++RL    ++  G+AY+H    + I+ R
Sbjct: 76  ETLTFVFEYMHTDLAQYMIQHP--GGLHP--YNVRL-FMFQLLRGLAYIH---GQHILHR 127

Query: 71  NVKPSNILFQEQSVAKLFDF--SYSESIPEGETRIRGRVMGTFGYLPPE-YIATGDCNEK 127
           ++KP N+L       KL DF  + ++SIP   ++     + T  Y PP+  +   D +  
Sbjct: 128 DLKPQNLLISYLGELKLADFGLARAKSIP---SQTYSSEVVTLWYRPPDVLLGATDYSSA 184

Query: 128 CDVYS 132
            D++ 
Sbjct: 185 LDIWG 189

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 40/141 (28%), Positives = 55/141 (39%), Gaps = 21/141 (14%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   + +  +++ EY+E G L D+        F        L+    IA G+ YL 
Sbjct: 69  IRLEGVVTKFKPAMIITEYMENGAL-DKYLRDHDGEFSSYQLVGMLR---GIAAGMKYLS 124

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLP-- 115
                  V R++   NIL       K+ DF  S   E  PEG     G      G +P  
Sbjct: 125 ---DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSG------GKIPIR 175

Query: 116 ---PEYIATGDCNEKCDVYSF 133
              PE IA        DV+SF
Sbjct: 176 WTAPEAIAYRKFTSASDVWSF 196

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 37.0 bits (86), Expect = 0.002
 Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 17/108 (15%)

Query: 14  VLVFEYVE--YGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
            LVFEY++       D        +   V   L      ++  G+AY H    R ++ R+
Sbjct: 79  TLVFEYLDTDLKQYMDD--CGGGLSMHNVRLFL-----FQLLRGLAYCH---QRRVLHRD 128

Query: 72  VKPSNILFQEQSVAKLFDF--SYSESIPEGETRIRGRVMGTFGYLPPE 117
           +KP N+L  E+   KL DF  + ++S+P   ++     + T  Y PP+
Sbjct: 129 LKPQNLLISERGELKLADFGLARAKSVP---SKTYSNEVVTLWYRPPD 173

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 11/134 (8%)

Query: 1   MRLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
           ++L+G  +E +  + +V EY+  G+L D +   R      +     LK ++++   + YL
Sbjct: 62  VQLLGVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYL 118

Query: 60  HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
               +   V R++   N+L  E +VAK+ DF  ++     +   +  V  T     PE +
Sbjct: 119 E---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEAL 171

Query: 120 ATGDCNEKCDVYSF 133
                + K DV+SF
Sbjct: 172 REKKFSTKSDVWSF 185

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 36.5 bits (84), Expect = 0.003
 Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 19/147 (12%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNF-----------EPVTCSLRLKIA 49
           + L+G C +     ++ EY   G L + +   R P             E +T    +  A
Sbjct: 81  INLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCA 140

Query: 50  MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGR 106
            ++A G+ YL    S+  + R++   N+L  E +V K+ DF  +    +I   +    GR
Sbjct: 141 YQVARGMEYLA---SQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGR 197

Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
           +     ++ PE +       + DV+SF
Sbjct: 198 L--PVKWMAPEALFDRVYTHQSDVWSF 222

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 36.6 bits (85), Expect = 0.003
 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 10/99 (10%)

Query: 1   MRLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
           ++LIG    TENPV +V E    G L  R Y   Q N   +  +  +  + +++  +AYL
Sbjct: 70  VKLIGVI--TENPVWIVMELAPLGEL--RSY--LQVNKYSLDLASLILYSYQLSTALAYL 123

Query: 60  HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPE 98
               S+  V R++   N+L       KL DF  S  + +
Sbjct: 124 E---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 36.5 bits (84), Expect = 0.003
 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 17/130 (13%)

Query: 10  TENPV-LVFEYVEYGTLADRI-----YHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
           +E P+ +V EY+  G+L D +        + PN         + +A ++A G+AY+    
Sbjct: 71  SEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNL--------VDMAAQVAAGMAYIE--- 119

Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
               + R+++ +NIL  +  V K+ DF  +  I + E   R        +  PE    G 
Sbjct: 120 RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 179

Query: 124 CNEKCDVYSF 133
              K DV+SF
Sbjct: 180 FTIKSDVWSF 189

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 36.3 bits (84), Expect = 0.003
 Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 17/138 (12%)

Query: 3   LIGCCLETEN-PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           L+G CL +E  P++V  Y+++G L + I   R     P    L +   +++A G+ YL  
Sbjct: 61  LLGICLPSEGSPLVVLPYMKHGDLRNFI---RSETHNPTVKDL-IGFGLQVAKGMEYLA- 115

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYLPPEYIA 120
             S+  V R++   N +  E    K+ DF  +  I + E   +      T   LP +++A
Sbjct: 116 --SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNH---TGAKLPVKWMA 170

Query: 121 -----TGDCNEKCDVYSF 133
                T     K DV+SF
Sbjct: 171 LESLQTQKFTTKSDVWSF 188

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 36.5 bits (84), Expect = 0.003
 Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 9/134 (6%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL+G C    +  LV +    G+L D +   R  + +P      L   ++IA G+ YL 
Sbjct: 72  VRLLGIC-PGASLQLVTQLSPLGSLLDHVRQHRD-SLDP---QRLLNWCVQIAKGMYYLE 126

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMGTFGYLPPEYI 119
                 +V RN+   NIL +  S+ ++ DF  ++ + P+ +            ++  E I
Sbjct: 127 ---EHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESI 183

Query: 120 ATGDCNEKCDVYSF 133
             G    + DV+S+
Sbjct: 184 LFGRYTHQSDVWSY 197

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 36.4 bits (85), Expect = 0.003
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 10/74 (13%)

Query: 48  IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRV 107
           I  ++   + Y+H   S  ++ R++KPSNIL       KL DF  + S+ E E      V
Sbjct: 112 IMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPV 168

Query: 108 MGTFGYLPPEYIAT 121
           +        +Y+AT
Sbjct: 169 L-------TDYVAT 175

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 36.4 bits (85), Expect = 0.003
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 10/77 (12%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEP-VTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
           +V EYVE+  L   +   +QP  +  V C +      ++  G+A+LH      I+ R++K
Sbjct: 83  MVMEYVEH-DLKSLMETMKQPFLQSEVKCLML-----QLLSGVAHLH---DNWILHRDLK 133

Query: 74  PSNILFQEQSVAKLFDF 90
            SN+L   + + K+ DF
Sbjct: 134 TSNLLLNNRGILKICDF 150

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 36.5 bits (84), Expect = 0.003
 Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 12/115 (10%)

Query: 7   CLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
           C +T + + LV EYV  G   D ++H ++    P   + R   A EI   + +LH    R
Sbjct: 64  CFQTTSRLFLVIEYVNGG---DLMFHMQRQRKLPEEHA-RF-YAAEICIALNFLH---ER 115

Query: 66  PIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMGTFGYLPPEYI 119
            I++R++K  N+L       KL D+    E +  G+T       GT  Y+ PE +
Sbjct: 116 GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDT--TSTFCGTPNYIAPEIL 168

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 36.4 bits (84), Expect = 0.004
 Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 12/114 (10%)

Query: 6   CCLETENPVL-VFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
           CC +T++ +  V EYV  G L  +I   R+  F+          A E+   + +LH    
Sbjct: 63  CCFQTKDRLFFVMEYVNGGDLMFQIQRSRK--FDEPRSRF---YAAEVTLALMFLH---R 114

Query: 65  RPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMGTFGYLPPE 117
             +++R++K  NIL   +   KL DF    E I  G T       GT  Y+ PE
Sbjct: 115 HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTT--TFCGTPDYIAPE 166

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 36.0 bits (83), Expect = 0.004
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 23/126 (18%)

Query: 18  EYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNV 72
           EY++ G+L D++Y         P  E V   LR +I   +  G+ +L    +  I+ R+V
Sbjct: 79  EYMDAGSL-DKLYAGGVATEGIP--EDV---LR-RITYAVVKGLKFLKEEHN--IIHRDV 129

Query: 73  KPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNE------ 126
           KP+N+L       KL DF  S ++      +    +G   Y+ PE I +G  N+      
Sbjct: 130 KPTNVLVNGNGQVKLCDFGVSGNL---VASLAKTNIGCQSYMAPERIKSGGPNQNPTYTV 186

Query: 127 KCDVYS 132
           + DV+S
Sbjct: 187 QSDVWS 192

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 36.1 bits (83), Expect = 0.004
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 8/65 (12%)

Query: 55  GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF--SYSESIPEGETRIRGRVMGTFG 112
           G+ Y H    R ++ R++KP N+L  E+   KL DF  + ++SIP   T+     + T  
Sbjct: 116 GLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIP---TKTYSNEVVTLW 169

Query: 113 YLPPE 117
           Y PP+
Sbjct: 170 YRPPD 174

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	159
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.98
KOG0589	426	consensus Serine/threonine protein kinase [General	99.98
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.97
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.97
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.97
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.97
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.97
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.97
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.97
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.97
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.97
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.97
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.97
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.97
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.97
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.97
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.97
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.97
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.97
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.97
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.97
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.97
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.97
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.97
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.97
KOG0610	459	consensus Putative serine/threonine protein kinase	99.97
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.97
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.97
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.97
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.97
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.97
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.97
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.97
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.97
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.97
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.97
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.97
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.97
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.97
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.97
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.97
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.97
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.97
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.97
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.97
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.97
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.97
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.97
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.97
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.97
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.97
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.97
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.97
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.97
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.97
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.97
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.97
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.97
PTZ00267	478	NIMA-related protein kinase; Provisional	99.97
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.97
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.97
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.97
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.97
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.97
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.96
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.96
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.96
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.96
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.96
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.96
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.96
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.96
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.96
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.96
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.96
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.96
PHA02988	283	hypothetical protein; Provisional	99.96
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.96
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.96
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.96
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.96
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.96
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.96
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.96
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.96
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.96
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.96
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.96
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.96
PHA03212	391	serine/threonine kinase US3; Provisional	99.96
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.95
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.95
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.95
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.95
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.95
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.95
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.95
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.95
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.95
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.95
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.95
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.95
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.95
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.95
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.95
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.95
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.95
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.95
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.95
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.95
PTZ00283	496	serine/threonine protein kinase; Provisional	99.95
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.95
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.95
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.95
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.95
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.95
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.95
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.95
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.95
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.95
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.95
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.95
PTZ00284	467	protein kinase; Provisional	99.95
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.95
PHA03207	392	serine/threonine kinase US3; Provisional	99.95
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.95
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.95
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.95
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.95
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.95
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.95
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.95
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.95
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.95
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.95
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.95
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.95
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.95
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.95
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.95
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.95
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.95
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.95
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.95
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.95
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.95
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.95
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.95
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.95
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.95
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.95
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.95
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.95
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.95
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.95
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.95
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.94
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.94
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.94
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.94
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.94
KOG0586	596	consensus Serine/threonine protein kinase [General	99.94
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.94
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.94
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.94
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.94
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.94
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.94
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.94
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.94
PTZ00036	440	glycogen synthase kinase; Provisional	99.94
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.94
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.94
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.94
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.94
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.94
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.94
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.94
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.94
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.94
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.94
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.94
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.94
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.94
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.94
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.94
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.94
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.94
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.94
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.94
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.94
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.94
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.94
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.94
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.94
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.94
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.94
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.94
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.94
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.94
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.94
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.94
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.94
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.94
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.94
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.94
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.94
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.94
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.94
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.94
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.94
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.94
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.94
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.94
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.94
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.94
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.94
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.94
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.94
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.94
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.94
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.94
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.94
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.94
PHA03210	501	serine/threonine kinase US3; Provisional	99.94
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.94
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.94
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.94
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.94
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.94
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.94
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.94
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.94
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.94
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.94
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.94
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.94
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.94
PHA03211	461	serine/threonine kinase US3; Provisional	99.94
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.94
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.94
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.94
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.94
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.94
PHA03209	357	serine/threonine kinase US3; Provisional	99.94
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.94
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.94
PHA02882	294	putative serine/threonine kinase; Provisional	99.94
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.94
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.94
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.94
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.94
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.94
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.94
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.94
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.94
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.94
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.93
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.93
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.93
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.93
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.93
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.93
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.93
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.93
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.93
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.93
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.93
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.93
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.93
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.93
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.93
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.93
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.93
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.93
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.93
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.93
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.93
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.93
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.93
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.93
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.93
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.93
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.93
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.93
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.93
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.93
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.93
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.93
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.93
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.93
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.93
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.93
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.93
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.93
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.93
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.93
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.93
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.93
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.93
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.93
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.93
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.93
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.93
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.93
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.93
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.93
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.93
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.93
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.93
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.93
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.93
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.92
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.92
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.92
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.92
KOG0584	632	consensus Serine/threonine protein kinase [General	99.92
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.92
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.92
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.92
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.92
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.92
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.92
PLN00009	294	cyclin-dependent kinase A; Provisional	99.92
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.92
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.92
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.92
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.92
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.92
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.92
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.92
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.92
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.92
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.92
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.92
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.92
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.91
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.91
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.91
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.91
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.91
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.91
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.91
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.91
PLN00181	793	protein SPA1-RELATED; Provisional	99.91
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.91
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.91
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.91
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.91
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.91
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.91
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.91
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.91
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.9
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.9
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.9
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.9
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.9
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.9
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.9
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.9
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.9
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.9
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.89
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.89
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.89
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.89
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.88
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.88
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.88
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.88
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.88
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.87
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.87
KOG1152	772	consensus Signal transduction serine/threonine kin	99.87
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.87
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.86
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.86
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.85
KOG3653	534	consensus Transforming growth factor beta/activin	99.85
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.85
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.83
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.83
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.78
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.77
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.77
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.76
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.75
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.74
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.73
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.71
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.71
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.68
PRK09188	365	serine/threonine protein kinase; Provisional	99.59
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.55
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.54
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.53
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.52
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.49
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.49
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.48
PRK12274	218	serine/threonine protein kinase; Provisional	99.44
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.43
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.39
PRK10345	210	hypothetical protein; Provisional	99.35
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.31
smart00090	237	RIO RIO-like kinase.	99.3
PRK14879	211	serine/threonine protein kinase; Provisional	99.25
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.25
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.23
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.22
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.22
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.19
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.03
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.03
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.01
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.98
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.97
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.81
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.74
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.72
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.72
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.69
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.69
KOG3087	229	consensus Serine/threonine protein kinase [General	98.62
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.57
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.56
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.53
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.49
KOG1243	690	consensus Protein kinase [General function predict	98.39
COG4248	637	Uncharacterized protein with protein kinase and he	98.39
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.33
PRK09902	216	hypothetical protein; Provisional	98.05
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.97
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	97.92
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.74
COG0478	304	RIO-like serine/threonine protein kinase fused to	97.66
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	97.07
KOG0576	829	consensus Mitogen-activated protein kinase kinase	96.97
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	96.93
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	96.75
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	96.67
COG0661	517	AarF Predicted unusual protein kinase [General fun	96.65
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	96.19
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	96.0
KOG1235	538	consensus Predicted unusual protein kinase [Genera	95.95
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	95.62
PLN02876	822	acyl-CoA dehydrogenase	95.31
KOG2268	465	consensus Serine/threonine protein kinase [Signal	95.21
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	94.32
PRK05231	319	homoserine kinase; Provisional	93.36
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	93.31
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	93.11
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	92.83
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	92.69
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	92.25
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	91.83
PHA03111	444	Ser/Thr kinase; Provisional	91.65
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	91.39
PF01636	239	APH: Phosphotransferase enzyme family This family	91.38
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	90.89
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	90.8
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	89.35
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	88.7
PRK10271	188	thiK thiamine kinase; Provisional	88.55
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	88.05
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	87.88
COG2334	331	Putative homoserine kinase type II (protein kinase	87.37
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	87.26
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	87.09
PLN02236	344	choline kinase	87.03
KOG2270	520	consensus Serine/threonine protein kinase involved	85.82
PRK06148	1013	hypothetical protein; Provisional	81.76
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	81.55
PRK06149	972	hypothetical protein; Provisional	80.42

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-39  Score=229.89  Aligned_cols=141  Identities=27%  Similarity=0.473  Sum_probs=127.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+|++++.+++..|+|||||.||+|.+++...     +.+++..+..++.|++.|+++||   +++++||||||+|||++
T Consensus        72 V~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~-----~~l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs  143 (429)
T KOG0595|consen   72 VRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRR-----GRLPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLS  143 (429)
T ss_pred             eeEEEEEecCCeEEEEEEeCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEec
Confidence            68999999999999999999999999999765     46899999999999999999999   99999999999999997


Q ss_pred             CC------CceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQ------SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~------~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ..      ..+|++|||+++.+....  ...+.+|++.|||||++....|+.|+|+||+|+++ |+|++|+.||...+
T Consensus       144 ~~~~~~~~~~LKIADFGfAR~L~~~~--~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Il-yq~l~g~~Pf~a~t  218 (429)
T KOG0595|consen  144 TTARNDTSPVLKIADFGFARFLQPGS--MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTIL-YQCLTGKPPFDAET  218 (429)
T ss_pred             cCCCCCCCceEEecccchhhhCCchh--HHHHhhCCccccCHHHHHhccccchhhHHHHHHHH-HHHHhCCCCccccC
Confidence            64      568999999999886432  33567899999999999999999999999999999 99999999999654

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-38  Score=223.19  Aligned_cols=144  Identities=28%  Similarity=0.376  Sum_probs=130.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++-.|++..++|+|+||+.||.|...+.+.     ..++++.+..|+.+|+.||.|||   +++++||||||+|||++
T Consensus        88 v~l~ysFQt~~kLylVld~~~GGeLf~hL~~e-----g~F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd  159 (357)
T KOG0598|consen   88 VKLIYSFQTEEKLYLVLDYLNGGELFYHLQRE-----GRFSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLD  159 (357)
T ss_pred             eeeEEecccCCeEEEEEeccCCccHHHHHHhc-----CCcchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeec
Confidence            57888999999999999999999999999765     56899999999999999999999   99999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCCc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWK  154 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~  154 (159)
                      .+++++++|||+++...... ..+.+++||+.|||||++.+.+|+..+|+||+|+++ |+|++|.+||.+++-+
T Consensus       160 ~~GHi~LtDFgL~k~~~~~~-~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGill-YeML~G~pPF~~~~~~  231 (357)
T KOG0598|consen  160 EQGHIKLTDFGLCKEDLKDG-DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILL-YEMLTGKPPFYAEDVK  231 (357)
T ss_pred             CCCcEEEeccccchhcccCC-CccccccCCccccChHHHhcCCCCcccchHhHHHHH-HHHhhCCCCCcCccHH
Confidence            99999999999998654432 233457899999999999999999999999999999 9999999999998754

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=5.2e-38  Score=221.10  Aligned_cols=140  Identities=28%  Similarity=0.434  Sum_probs=128.3

Q ss_pred             CeEEEEEecCCC-ceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe
Q 031436            1 MRLIGCCLETEN-PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~~~~-~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~   79 (159)
                      |+++|+|.+.+. ..++||||.+|||.+.++..     +++++.....++.++++||.|||.  ..+++|||+||.|+|+
T Consensus       140 V~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~-----g~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLv  212 (364)
T KOG0581|consen  140 VGFYGAFYSNGEEISICMEYMDGGSLDDILKRV-----GRIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLV  212 (364)
T ss_pred             eeEeEEEEeCCceEEeehhhcCCCCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeee
Confidence            689999999885 99999999999999999765     568899999999999999999994  3899999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           80 QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      ..++.+||+|||.+..+.+.   ...++.||..|||||-+.+..|+.++||||||+++ +|++.|+.||..+
T Consensus       213 NskGeVKicDFGVS~~lvnS---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsl-lE~a~GrfP~~~~  280 (364)
T KOG0581|consen  213 NSKGEVKICDFGVSGILVNS---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSL-LELAIGRFPYPPP  280 (364)
T ss_pred             ccCCCEEeccccccHHhhhh---hcccccccccccChhhhcCCcCCcccceecccHHH-HHHhhCCCCCCCc
Confidence            99999999999999887654   33467899999999999999999999999999999 9999999999886

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6.9e-38  Score=228.75  Aligned_cols=148  Identities=28%  Similarity=0.384  Sum_probs=129.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++|+|.++.+++||||||+.|+|.+++....+   ..+...+.+.++.|||.|++||+   ++++|||||.++|||++
T Consensus       264 V~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~---~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~  337 (468)
T KOG0197|consen  264 VKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREG---GLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVD  337 (468)
T ss_pred             EEEEEEEecCCceEEEEEecccCcHHHHhhhcCC---CccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeec
Confidence            7899999998999999999999999999986322   56788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCCcc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDWKP  155 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~~~  155 (159)
                      .+..+||+|||+++.+..+.-.......-+..|+|||.+....|+.+|||||||+++ +|++| |+.||+++.-.+
T Consensus       338 ~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL-~E~fT~G~~py~~msn~e  412 (468)
T KOG0197|consen  338 EDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLL-WELFTYGRVPYPGMSNEE  412 (468)
T ss_pred             cCceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhH-HHHhccCCCCCCCCCHHH
Confidence            999999999999996554443333334458899999999999999999999999999 88888 899998876443

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-37  Score=212.78  Aligned_cols=140  Identities=26%  Similarity=0.402  Sum_probs=129.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+|.+.|.+.+.+++||||.+||.|.+.+++.     +++++.....++.|++.|++|||   ++++++|||||+|||+|
T Consensus       107 v~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~-----~rF~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD  178 (355)
T KOG0616|consen  107 VKLYGTFKDNSNLYMVMEYVPGGELFSYLRKS-----GRFSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLD  178 (355)
T ss_pred             EEEEEeeccCCeEEEEEeccCCccHHHHHHhc-----CCCCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeec
Confidence            57889999999999999999999999999875     56889999999999999999999   99999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      +++.+|+.|||+++.....    +-+.+||+.|+|||.+...+++.++|+||||+++ |||+.|.+||...+.
T Consensus       179 ~~G~iKitDFGFAK~v~~r----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLI-YEMlaG~pPF~~~~~  246 (355)
T KOG0616|consen  179 QNGHIKITDFGFAKRVSGR----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLI-YEMLAGYPPFYDDNP  246 (355)
T ss_pred             cCCcEEEEeccceEEecCc----EEEecCCccccChHHhhcCCCCcchhHHHHHHHH-HHHHcCCCCCcCCCh
Confidence            9999999999999887543    3457899999999999999999999999999999 999999999987653

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=8.8e-36  Score=216.27  Aligned_cols=145  Identities=31%  Similarity=0.464  Sum_probs=126.2

Q ss_pred             CeEEEEEecCC-CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCC-eEEecCCCCCEE
Q 031436            1 MRLIGCCLETE-NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRP-IVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~-~~h~~l~~~nil   78 (159)
                      |+|+|+|.+.. ..++||||+++|+|.+++...+   ...++...++.++.||+.|+.|||   +++ ++|||||++|+|
T Consensus       102 V~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~---~~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiL  175 (362)
T KOG0192|consen  102 VQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKR---KRKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNIL  175 (362)
T ss_pred             eeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcc---cCCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEE
Confidence            67999999877 7999999999999999997631   167899999999999999999999   888 999999999999


Q ss_pred             ecCCC-ceEEEecCCCcccCCCcceeeeeecccccccCccccc--cCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           79 FQEQS-VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA--TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        79 ~~~~~-~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~--~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      ++.+. .+||+|||+++....... ..+...||..|||||++.  ...|+.|+|+||||+++ |||+||+.||.+...
T Consensus       176 v~~~~~~~KI~DFGlsr~~~~~~~-~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvl-WEl~t~~~Pf~~~~~  251 (362)
T KOG0192|consen  176 VDLKGKTLKIADFGLSREKVISKT-SMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVL-WELLTGEIPFEDLAP  251 (362)
T ss_pred             EcCCCCEEEECCCccceeeccccc-cccCCCCCccccChhhhcCCCCcCCccchhhhHHHHH-HHHHHCCCCCCCCCH
Confidence            99997 999999999876543221 112256889999999999  56899999999999999 999999999998764

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=6.7e-36  Score=221.27  Aligned_cols=143  Identities=22%  Similarity=0.346  Sum_probs=131.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+|+++|++.++.|+|.|.|+.++|...++..     +.+++.++..++.||+.|+.|||   +++++|||||.-|++++
T Consensus        81 V~f~~~FEDs~nVYivLELC~~~sL~el~Krr-----k~ltEpEary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~  152 (592)
T KOG0575|consen   81 VQFYHFFEDSNNVYIVLELCHRGSLMELLKRR-----KPLTEPEARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLN  152 (592)
T ss_pred             EeeeeEeecCCceEEEEEecCCccHHHHHHhc-----CCCCcHHHHHHHHHHHHHHHHHH---hcCceecccchhheeec
Confidence            68999999999999999999999999988843     68999999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+.++||+|||++..+..+.. ...+.+||+.|.|||++.....+..+||||+||++ |.|+.|++||...+.
T Consensus       153 ~~~~VKIgDFGLAt~le~~~E-rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvm-YtLL~G~PPFetk~v  223 (592)
T KOG0575|consen  153 ENMNVKIGDFGLATQLEYDGE-RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVM-YTLLVGRPPFETKTV  223 (592)
T ss_pred             CcCcEEecccceeeeecCccc-ccceecCCCcccChhHhccCCCCCchhhhhhhhHH-HhhhhCCCCcccchH
Confidence            999999999999988754433 34467899999999999999999999999999999 999999999988653

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.5e-35  Score=211.17  Aligned_cols=144  Identities=26%  Similarity=0.406  Sum_probs=125.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++.+......|+||||++||+|.+++...     +.+.+...+.++.|++.|++|||   +.|++||||||+|||+.
T Consensus       239 V~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~n-----k~l~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~  310 (475)
T KOG0615|consen  239 VRIKDFFEVPDSSYMVLEYVEGGELFDKVVAN-----KYLREDLGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLS  310 (475)
T ss_pred             EEEeeeeecCCceEEEEEEecCccHHHHHHhc-----cccccchhHHHHHHHHHHHHHHH---HcCcccccCCcceEEec
Confidence            68899999999999999999999999998765     56778888999999999999999   99999999999999997


Q ss_pred             CC---CceEEEecCCCcccCCCcceeeeeecccccccCccccccCCC---CCCcceEeccccccCcceecccccccCCCc
Q 031436           81 EQ---SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC---NEKCDVYSFDGSRDSGHLTGRAWYRSEDWK  154 (159)
Q Consensus        81 ~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~---~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~  154 (159)
                      .+   ..+|+.|||+++...+  .....+++||+.|.|||++.+...   ..++|+||+||++ |.+++|.+||+.+..+
T Consensus       311 ~~~e~~llKItDFGlAK~~g~--~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvL-fvcLsG~pPFS~~~~~  387 (475)
T KOG0615|consen  311 NDAEDCLLKITDFGLAKVSGE--GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVL-FVCLSGYPPFSEEYTD  387 (475)
T ss_pred             cCCcceEEEecccchhhcccc--ceehhhhcCCccccChhheecCCeecccchheeeeccceE-EEEeccCCCcccccCC
Confidence            66   5689999999998753  334456889999999999986643   3478999999999 9999999999987665


Q ss_pred             c
Q 031436          155 P  155 (159)
Q Consensus       155 ~  155 (159)
                      +
T Consensus       388 ~  388 (475)
T KOG0615|consen  388 P  388 (475)
T ss_pred             c
Confidence            5

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.3e-36  Score=223.94  Aligned_cols=143  Identities=22%  Similarity=0.356  Sum_probs=128.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      ++++++|+...++|+||||+.||++......      ..+++.....|+..++.||+|||   ++++++||||.+|||+|
T Consensus       432 ~~L~~~fQT~~~l~fvmey~~Ggdm~~~~~~------~~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD  502 (694)
T KOG0694|consen  432 VNLFSCFQTKEHLFFVMEYVAGGDLMHHIHT------DVFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLD  502 (694)
T ss_pred             eecccccccCCeEEEEEEecCCCcEEEEEec------ccccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEc
Confidence            4688899999999999999999995443322      46889999999999999999999   99999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCCc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWK  154 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~  154 (159)
                      .++++||+|||+++....... .++++.||+.|+|||++.+..|+.++|+|||||++ |||+.|..||++.+.+
T Consensus       503 ~eGh~kiADFGlcKe~m~~g~-~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLl-yeML~Gq~PF~gddEe  574 (694)
T KOG0694|consen  503 TEGHVKIADFGLCKEGMGQGD-RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLL-YEMLVGESPFPGDDEE  574 (694)
T ss_pred             ccCcEEecccccccccCCCCC-ccccccCChhhcChhhhccCcccchhhHHHHHHHH-HHHHcCCCCCCCCCHH
Confidence            999999999999988764433 45788999999999999999999999999999999 9999999999998754

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=4.9e-35  Score=214.49  Aligned_cols=143  Identities=25%  Similarity=0.393  Sum_probs=127.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+|+..|.+...+|+|+||+++|+|.+.+++.     +.+.+.-...++.||+.||+|||   ++|+|||||||+|||++
T Consensus       137 vkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~-----Gsfde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd  208 (604)
T KOG0592|consen  137 VKLYFTFQDEESLYFVLEYAPNGDLLDLIKKY-----GSFDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLD  208 (604)
T ss_pred             EEEEEEeecccceEEEEEecCCCcHHHHHHHh-----CcchHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEc
Confidence            57899999999999999999999999999876     45777788899999999999999   99999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcce------------eeeeecccccccCccccccCCCCCCcceEeccccccCcceeccccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETR------------IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWY  148 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~------------~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~  148 (159)
                      .+++++|.|||.++.+......            ....+.||..|.+||++.+...++.+|+|+|||++ |.|+.|.+||
T Consensus       209 ~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCil-yQmlaG~PPF  287 (604)
T KOG0592|consen  209 KDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCIL-YQMLAGQPPF  287 (604)
T ss_pred             CCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHH-HHHhcCCCCC
Confidence            9999999999988765532110            11458899999999999999999999999999999 9999999999


Q ss_pred             ccCC
Q 031436          149 RSED  152 (159)
Q Consensus       149 ~~~~  152 (159)
                      .+.+
T Consensus       288 ra~N  291 (604)
T KOG0592|consen  288 RAAN  291 (604)
T ss_pred             cccc
Confidence            8875

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=4e-35  Score=214.57  Aligned_cols=145  Identities=22%  Similarity=0.313  Sum_probs=126.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+|+..|++...+||||||++||++..++...     ..+++.....++.+++.|+..+|   +.|++||||||+|+|+|
T Consensus       204 VKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~-----~~L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD  275 (550)
T KOG0605|consen  204 VKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRK-----DTLTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLID  275 (550)
T ss_pred             EEEEEEecCCCeeEEEEEecCCccHHHHHHhc-----CcCchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeec
Confidence            68999999999999999999999999999765     57999999999999999999999   99999999999999999


Q ss_pred             CCCceEEEecCCCcccCCC-----------------------cce----e-------------------eeeeccccccc
Q 031436           81 EQSVAKLFDFSYSESIPEG-----------------------ETR----I-------------------RGRVMGTFGYL  114 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~-----------------------~~~----~-------------------~~~~~~~~~~~  114 (159)
                      ..+++||.|||++..+...                       ...    .                   .-...||+.|+
T Consensus       276 ~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYi  355 (550)
T KOG0605|consen  276 AKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYI  355 (550)
T ss_pred             CCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCcccc
Confidence            9999999999997532210                       000    0                   01234789999


Q ss_pred             CccccccCCCCCCcceEeccccccCcceecccccccCCCc
Q 031436          115 PPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWK  154 (159)
Q Consensus       115 ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~  154 (159)
                      |||++.+..|+..+|+||+||++ |||+.|.+||.+++.+
T Consensus       356 APEVll~kgY~~~cDwWSLG~Im-yEmLvGyPPF~s~tp~  394 (550)
T KOG0605|consen  356 APEVLLGKGYGKECDWWSLGCIM-YEMLVGYPPFCSETPQ  394 (550)
T ss_pred             chHHHhcCCCCccccHHHHHHHH-HHHHhCCCCCCCCCHH
Confidence            99999999999999999999999 9999999999998654

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.2e-35  Score=214.30  Aligned_cols=141  Identities=28%  Similarity=0.452  Sum_probs=125.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++..+.-++++|+|||||+||+|.+.+...      .+.+.++..++.+++.||+|||   .++++|||||.+|||++
T Consensus       333 Vnfl~Sylv~deLWVVMEym~ggsLTDvVt~~------~~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~  403 (550)
T KOG0578|consen  333 VNFLDSYLVGDELWVVMEYMEGGSLTDVVTKT------RMTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLT  403 (550)
T ss_pred             HHHHHHhcccceeEEEEeecCCCchhhhhhcc------cccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEec
Confidence            34555566678899999999999999999763      4889999999999999999999   99999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+|++|||++..+..... +..+..|+++|||||+.....|++++||||+|+++ +||+.|.+||-.++
T Consensus       404 ~~g~vKltDFGFcaqi~~~~~-KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMa-IEMveGEPPYlnE~  473 (550)
T KOG0578|consen  404 MDGSVKLTDFGFCAQISEEQS-KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMA-IEMVEGEPPYLNEN  473 (550)
T ss_pred             cCCcEEEeeeeeeeccccccC-ccccccCCCCccchhhhhhcccCccccchhhhhHH-HHHhcCCCCccCCC
Confidence            999999999999988866543 34567899999999999999999999999999999 99999999997654

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-33  Score=204.75  Aligned_cols=144  Identities=43%  Similarity=0.696  Sum_probs=124.9

Q ss_pred             CeEEEEEecCCC-ceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe
Q 031436            1 MRLIGCCLETEN-PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~~~~-~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~   79 (159)
                      |+|+|+|.+++. .+||+||+++|+|.+.+......   .++|.....++.++|.||.|||..+...++|||+|+.|||+
T Consensus       134 v~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~---~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL  210 (361)
T KOG1187|consen  134 VKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE---PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL  210 (361)
T ss_pred             ccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCC---CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE
Confidence            689999999984 99999999999999999765421   78999999999999999999997555569999999999999


Q ss_pred             cCCCceEEEecCCCcccCC-Ccceeeeee-cccccccCccccccCCCCCCcceEeccccccCcceeccccccc
Q 031436           80 QEQSVAKLFDFSYSESIPE-GETRIRGRV-MGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~-~~~~~~~~~-~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      |.+...|++|||+++..+. ....  ... .|+..|++||+......+.++||||||+++ .|+++|+.+.+.
T Consensus       211 D~~~~aKlsDFGLa~~~~~~~~~~--~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvl-lElitgr~~~d~  280 (361)
T KOG1187|consen  211 DEDFNAKLSDFGLAKLGPEGDTSV--STTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVL-LELITGRKAVDQ  280 (361)
T ss_pred             CCCCCEEccCccCcccCCccccce--eeecCCCCccCChhhhccCCcCcccccccchHHH-HHHHhCCcccCC
Confidence            9999999999999966543 2221  112 689999999999888899999999999999 999999987764

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=5.5e-34  Score=217.73  Aligned_cols=149  Identities=31%  Similarity=0.493  Sum_probs=128.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCC--------C-CCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQP--------N-FEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN   71 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~--------~-~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~   71 (159)
                      |+|+|+|.++++.++|+|||.+|+|.++|+.....        . +.+++..+.+.++.||+.|+.||.   +..++|||
T Consensus       552 VrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRD  628 (774)
T KOG1026|consen  552 VRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRD  628 (774)
T ss_pred             EEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccc
Confidence            79999999999999999999999999999854321        1 345888999999999999999999   89999999


Q ss_pred             CCCCCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccc
Q 031436           72 VKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYR  149 (159)
Q Consensus        72 l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~  149 (159)
                      |..+|+|++.+-.+||+|||+++.+...+- +......-++.||+||.+.+.+|+++||||||||++ ||+++ |+.||-
T Consensus       629 LATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvL-WEIFsyG~QPy~  707 (774)
T KOG1026|consen  629 LATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVL-WEIFSYGKQPYY  707 (774)
T ss_pred             hhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhh-hhhhccccCccc
Confidence            999999999999999999999987765443 333233458899999999999999999999999999 88877 999997


Q ss_pred             cCCC
Q 031436          150 SEDW  153 (159)
Q Consensus       150 ~~~~  153 (159)
                      +..=
T Consensus       708 glSn  711 (774)
T KOG1026|consen  708 GLSN  711 (774)
T ss_pred             ccch
Confidence            7643

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-33  Score=206.09  Aligned_cols=142  Identities=27%  Similarity=0.366  Sum_probs=125.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      ++++.++......++||||+.+|+|.+.+...     .++.+.....++.|++.|++|+|   +++++||||||+|++++
T Consensus        83 ~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~-----g~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld  154 (370)
T KOG0583|consen   83 IRLLEVFATPTKIYIVMEYCSGGDLFDYIVNK-----GRLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLD  154 (370)
T ss_pred             eEEEEEEecCCeEEEEEEecCCccHHHHHHHc-----CCCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEec
Confidence            57888999889999999999999999999873     56888999999999999999999   99999999999999999


Q ss_pred             CC-CceEEEecCCCcccCCCcceeeeeecccccccCccccccCC-CC-CCcceEeccccccCcceecccccccCC
Q 031436           81 EQ-SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD-CN-EKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~-~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+ .++|++|||++...... .....+..|++.|+|||++.+.. |+ .++|+||+|+++ |.|++|+.||...+
T Consensus       155 ~~~~~~Kl~DFG~s~~~~~~-~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViL-y~ml~G~~PF~d~~  227 (370)
T KOG0583|consen  155 GNEGNLKLSDFGLSAISPGE-DGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVIL-YVLLCGRLPFDDSN  227 (370)
T ss_pred             CCCCCEEEeccccccccCCC-CCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHH-HHHHhCCCCCCCcc
Confidence            99 99999999998876311 12223568999999999999988 85 789999999999 99999999999854

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=1.6e-33  Score=210.18  Aligned_cols=144  Identities=22%  Similarity=0.300  Sum_probs=127.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      ||++++|...+++|||+|.+. -+|+++++.+   ++.+++...+..++.|++.+|.+||   ..+|||+||||+|||+.
T Consensus       251 Vrm~d~F~fr~HlciVfELL~-~NLYellK~n---~f~Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~  323 (586)
T KOG0667|consen  251 VRMLDYFYFRNHLCIVFELLS-TNLYELLKNN---KFRGLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENILLK  323 (586)
T ss_pred             EEeeeccccccceeeeehhhh-hhHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhheeec
Confidence            689999999999999999996 5999999875   3467899999999999999999999   99999999999999996


Q ss_pred             CC--CceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCCccc
Q 031436           81 EQ--SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWKPA  156 (159)
Q Consensus        81 ~~--~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~~~  156 (159)
                      ..  ..+|++|||++........    ++..+.+|+|||++.|.+|+.+.|||||||++ .||.+|.+.|+|.+..++
T Consensus       324 ~~~r~~vKVIDFGSSc~~~q~vy----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIl-AEL~tG~PLfpG~ne~DQ  396 (586)
T KOG0667|consen  324 DPKRSRIKVIDFGSSCFESQRVY----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCIL-AELFTGEPLFPGDNEYDQ  396 (586)
T ss_pred             cCCcCceeEEecccccccCCcce----eeeeccccccchhhccCCCCCccceeehhhhH-HhHhcCccccCCCCHHHH
Confidence            43  4799999999876644322    46779999999999999999999999999999 999999999999876543

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-34  Score=211.49  Aligned_cols=142  Identities=30%  Similarity=0.494  Sum_probs=127.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |.|.|+|++..=+||+||||+.|-|..+++..     .+++....+.|..+|+.|+.|||   ...+||||||..|||+.
T Consensus       175 I~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~-----~~itp~llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs  246 (904)
T KOG4721|consen  175 ITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAG-----RPITPSLLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILIS  246 (904)
T ss_pred             eeEeeeecCCceeEEeeeccccccHHHHHhcc-----CccCHHHHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEee
Confidence            57899999988899999999999999999876     46888899999999999999999   88899999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+..+||+|||-++.....  .-...+.|+..|||||++...+++.|+|||||||++ |||+||..||...+.
T Consensus       247 ~~d~VKIsDFGTS~e~~~~--STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVL-WEmLT~EiPYkdVds  316 (904)
T KOG4721|consen  247 YDDVVKISDFGTSKELSDK--STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVL-WEMLTGEIPYKDVDS  316 (904)
T ss_pred             ccceEEeccccchHhhhhh--hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHH-HHHHhcCCCccccch
Confidence            9999999999988766443  223457899999999999999999999999999999 999999999976553

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.8e-35  Score=200.93  Aligned_cols=144  Identities=20%  Similarity=0.302  Sum_probs=123.4

Q ss_pred             EecCCC-ceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCC-CCeEEecCCCCCEEecCCCc
Q 031436            7 CLETEN-PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS-RPIVFRNVKPSNILFQEQSV   84 (159)
Q Consensus         7 ~~~~~~-~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~-~~~~h~~l~~~nil~~~~~~   84 (159)
                      +.+++. +.++||+|.+|+|.+.+++.+... +.+++..+..++.|++.|+..+|+-.. ..++||||||.||+++.++.
T Consensus        88 f~~~~evlnivmE~c~~GDLsqmIk~~K~qk-r~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gv  166 (375)
T KOG0591|consen   88 FIEDNEVLNIVMELCDAGDLSQMIKHFKKQK-RLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGV  166 (375)
T ss_pred             hhccchhhHHHHHhhcccCHHHHHHHHHhcc-ccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCc
Confidence            444555 789999999999999888655433 678999999999999999999994211 23899999999999999999


Q ss_pred             eEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           85 AKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        85 ~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      +|++|||+++.+.+.. .....+.||++||+||.+.+.+|+.++|+||+||++ |||..-++||.+.+.
T Consensus       167 vKLGDfGL~r~l~s~~-tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCll-yEMcaL~~PF~g~n~  233 (375)
T KOG0591|consen  167 VKLGDFGLGRFLSSKT-TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLL-YEMCALQSPFYGDNL  233 (375)
T ss_pred             eeeccchhHhHhcchh-HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHH-HHHHhcCCCcccccH
Confidence            9999999998775433 334567899999999999999999999999999999 999999999998754

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=8e-33  Score=196.14  Aligned_cols=141  Identities=28%  Similarity=0.428  Sum_probs=116.1

Q ss_pred             eEEEEEecCC--CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe
Q 031436            2 RLIGCCLETE--NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF   79 (159)
Q Consensus         2 ~l~~~~~~~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~   79 (159)
                      +.+|......  .++++|||+++|+|.+++++..    ..++++.+..++.|++.|+.|||   +++++|+||||.|||+
T Consensus        78 ~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g----~~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl  150 (313)
T KOG0198|consen   78 QYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYG----GKLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILL  150 (313)
T ss_pred             eeCCccccccCeeeEeeeeccCCCcHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEE
Confidence            4455433333  5789999999999999998753    25899999999999999999999   9999999999999999


Q ss_pred             cC-CCceEEEecCCCcccCC--CcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceeccccccc
Q 031436           80 QE-QSVAKLFDFSYSESIPE--GETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        80 ~~-~~~~~l~d~~~~~~~~~--~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      +. ++.+|++|||.+.....  ..........|++.|||||++... ...+++|+||+||++ .||+||+.||..
T Consensus       151 ~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtV-vEM~Tg~~PW~~  224 (313)
T KOG0198|consen  151 DPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTV-VEMLTGKPPWSE  224 (313)
T ss_pred             eCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEE-EeccCCCCcchh
Confidence            99 68999999998876653  111122346789999999999853 334699999999999 999999999986

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.98  E-value=1.3e-32  Score=203.29  Aligned_cols=145  Identities=25%  Similarity=0.349  Sum_probs=126.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+|+|++.+..+++++||+|+||+|.+++....    ..++..+...++.+.++||+|||   +++++||||..+|+|++
T Consensus       224 Vr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~----~~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~  296 (474)
T KOG0194|consen  224 VRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNK----KSLPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCLYS  296 (474)
T ss_pred             EEEEEEEcCCCccEEEEEecCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHheec
Confidence            689999999999999999999999999998753    35889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCCc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDWK  154 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~~  154 (159)
                      .+..+|++|||++..-...... .....-+..|+|||.+....|+.++|||||||++ ||+++ |..||++...+
T Consensus       297 ~~~~vKISDFGLs~~~~~~~~~-~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~-~Eif~~g~~Py~g~~~~  369 (474)
T KOG0194|consen  297 KKGVVKISDFGLSRAGSQYVMK-KFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLL-WEIFENGAEPYPGMKNY  369 (474)
T ss_pred             CCCeEEeCccccccCCcceeec-cccccCcceecChhhhccCccccccchhheeeeE-EeeeccCCCCCCCCCHH
Confidence            9888999999998765421111 1122457899999999988999999999999999 99998 78899987654

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.98  E-value=3.2e-33  Score=203.42  Aligned_cols=148  Identities=24%  Similarity=0.328  Sum_probs=132.7

Q ss_pred             eEEEEEecCCC-ceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            2 RLIGCCLETEN-PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         2 ~l~~~~~~~~~-~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      ...+.|..++. ++|+|+||+||++.+.++..++   ..++++.+..|+.|++.|+.|||   ++.++|||||+.||++.
T Consensus        67 ~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~---~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Niflt  140 (426)
T KOG0589|consen   67 EYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKG---VLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLT  140 (426)
T ss_pred             eeccchhcCCceEEEEEeecCCCCHHHHHHHHhh---ccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhcc
Confidence            45567777777 8999999999999999988763   67899999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCCcccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWKPAV  157 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~~~~  157 (159)
                      ++..+++.|||+++.+.... ....+..|++.|++||.+.+.+|+.|+|+||+||++ |||.+-+.+|.+.+++..+
T Consensus       141 k~~~VkLgDfGlaK~l~~~~-~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~-yEm~~lk~aF~a~~m~~Li  215 (426)
T KOG0589|consen  141 KDKKVKLGDFGLAKILNPED-SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCL-YEMCTLKPAFKASNMSELI  215 (426)
T ss_pred             ccCceeecchhhhhhcCCch-hhhheecCCCcccCHHHhCCCCCCccCcchhhcchH-HHHHhcccccCccchHHHH
Confidence            99999999999999886543 233456899999999999999999999999999999 9999999999999988654

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=1.6e-32  Score=205.38  Aligned_cols=141  Identities=25%  Similarity=0.365  Sum_probs=126.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      ++++++++...++|++.||+++|-|.+.+.+.     +++++.+..+++.||+.|+.|+|   ..+++||||||+|+|++
T Consensus        75 l~LydVwe~~~~lylvlEyv~gGELFdylv~k-----G~l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd  146 (786)
T KOG0588|consen   75 LRLYDVWENKQHLYLVLEYVPGGELFDYLVRK-----GPLPEREAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLD  146 (786)
T ss_pred             eeeeeeeccCceEEEEEEecCCchhHHHHHhh-----CCCCCHHHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhh
Confidence            47899999999999999999999999988765     57899999999999999999999   99999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCC-CCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC-NEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~-~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..+||+|||++.....+.  ...+-+|++.|.|||++.|.+| +.++||||.||++ |.|++|+.||++.+
T Consensus       147 ~~~nIKIADFGMAsLe~~gk--lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVIL-fALLtG~LPFdDdN  216 (786)
T KOG0588|consen  147 VKNNIKIADFGMASLEVPGK--LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVIL-FALLTGKLPFDDDN  216 (786)
T ss_pred             cccCEeeeccceeecccCCc--cccccCCCcccCCchhhcCCCCCCCccccchhHHHH-HHHHhCCCCCCCcc
Confidence            99889999999987554433  3344579999999999999998 5889999999999 99999999999765

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.97  E-value=2.7e-32  Score=200.07  Aligned_cols=143  Identities=21%  Similarity=0.333  Sum_probs=122.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++.+.++..+++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        64 v~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~  135 (363)
T cd05628          64 VKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKK-----DTLTEEETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLD  135 (363)
T ss_pred             ceEEEEEecCCeEEEEEcCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEEC
Confidence            46788999989999999999999999988654     45788999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcc----------------------------------eeeeeecccccccCccccccCCCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGET----------------------------------RIRGRVMGTFGYLPPEYIATGDCNE  126 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~ape~~~~~~~~~  126 (159)
                      .++.++++|||++........                                  .......|+..|+|||.+.+..++.
T Consensus       136 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~  215 (363)
T cd05628         136 SKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNK  215 (363)
T ss_pred             CCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCC
Confidence            999999999998764321100                                  0011235788999999999999999


Q ss_pred             CcceEeccccccCcceecccccccCC
Q 031436          127 KCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus       127 ~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ++|+|||||++ |+|++|+.||.+.+
T Consensus       216 ~~DvwSlGvil-~ell~G~~Pf~~~~  240 (363)
T cd05628         216 LCDWWSLGVIM-YEMLIGYPPFCSET  240 (363)
T ss_pred             chhhhhhHHHH-HHHHhCCCCCCCCC
Confidence            99999999999 99999999998754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=3e-32  Score=198.46  Aligned_cols=144  Identities=22%  Similarity=0.303  Sum_probs=124.8

Q ss_pred             CeEEEEEecC--CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLET--ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      |+|.++.++.  +.+|+|+|||++ +|.-++....    -.+++.+++.++.|++.|+.|+|   .++++|||||..|||
T Consensus       179 ikL~eivt~~~~~siYlVFeYMdh-DL~GLl~~p~----vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiL  250 (560)
T KOG0600|consen  179 IKLEEIVTSKLSGSIYLVFEYMDH-DLSGLLSSPG----VKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNIL  250 (560)
T ss_pred             cceeeEEEecCCceEEEEEecccc-hhhhhhcCCC----cccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceE
Confidence            5778888775  689999999986 9988886532    46899999999999999999999   999999999999999


Q ss_pred             ecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCCC
Q 031436           79 FQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        79 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      ++.++.+||+|||+++..........+..+.|..|+|||++.|. .|++.+|+||.||++ .||+.|+++|++.+.
T Consensus       251 idn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl-~El~~gkPI~~G~tE  325 (560)
T KOG0600|consen  251 IDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCIL-AELFLGKPILQGRTE  325 (560)
T ss_pred             EcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHH-HHHHcCCCCcCCccH
Confidence            99999999999999987655443333445668899999999986 599999999999999 999999999998753

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.97  E-value=1.2e-31  Score=193.89  Aligned_cols=143  Identities=21%  Similarity=0.282  Sum_probs=122.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++..++..+++|||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        58 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~  129 (323)
T cd05571          58 TALKYSFQTHDRLCFVMEYANGGELFFHLSRE-----RVFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLD  129 (323)
T ss_pred             CCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEEC
Confidence            45778899899999999999999999888654     45788888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.+|++|||++........ ......++..|+|||.+.+..++.++|+||+||++ |+|++|+.||.+.+.
T Consensus       130 ~~~~~kl~DfG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il-~elltg~~Pf~~~~~  200 (323)
T cd05571         130 KDGHIKITDFGLCKEGISDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM-YEMMCGRLPFYNQDH  200 (323)
T ss_pred             CCCCEEEeeCCCCcccccCCC-cccceecCccccChhhhcCCCCCccccCcccchhh-hhhhcCCCCCCCCCH
Confidence            999999999998765332221 12234578999999999999999999999999999 999999999977653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.97  E-value=6.3e-32  Score=198.59  Aligned_cols=142  Identities=22%  Similarity=0.330  Sum_probs=121.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++||||+++|+|.+.+..      ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus       106 v~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~------~~~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~  176 (370)
T cd05621         106 VQLFCAFQDDKYLYMVMEYMPGGDLVNLMSN------YDVPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLD  176 (370)
T ss_pred             eeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEC
Confidence            4678899999999999999999999998854      24678888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCC----CCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD----CNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~----~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+|++|||++...............++..|+|||.+.+..    ++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       177 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~il-yell~G~~Pf~~~~  251 (370)
T cd05621         177 KHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL-FEMLVGDTPFYADS  251 (370)
T ss_pred             CCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHH-HHHHhCCCCCCCCC
Confidence            9999999999998765432222223456889999999987643    78899999999999 99999999998754

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.97  E-value=2.9e-33  Score=193.31  Aligned_cols=143  Identities=22%  Similarity=0.342  Sum_probs=124.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |.|+++|...+++++|+|||.. ++.+.+.+..    ..++...++.+++|++.|+.|+|   +++++|||+||+||+++
T Consensus        64 VnLiEVFrrkrklhLVFE~~dh-TvL~eLe~~p----~G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit  135 (396)
T KOG0593|consen   64 VNLIEVFRRKRKLHLVFEYCDH-TVLHELERYP----NGVPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKPENILIT  135 (396)
T ss_pred             HHHHHHHHhcceeEEEeeecch-HHHHHHHhcc----CCCCHHHHHHHHHHHHHHhhhhh---hcCeecccCChhheEEe
Confidence            4567788888999999999975 8888887542    56889999999999999999999   99999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      +++.+|++|||+++.+..+.. .-+.+..|..|+|||.+.+ .+|+..+||||+||++ .||++|.+.|+|...
T Consensus       136 ~~gvvKLCDFGFAR~L~~pgd-~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~-aEl~~G~pL~PG~SD  207 (396)
T KOG0593|consen  136 QNGVVKLCDFGFARTLSAPGD-NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVF-AELLTGEPLWPGRSD  207 (396)
T ss_pred             cCCcEEeccchhhHhhcCCcc-hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHH-HHHhcCCcCCCCcch
Confidence            999999999999988764322 2234567888999999998 6799999999999999 999999999998743

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.97  E-value=1.9e-31  Score=196.32  Aligned_cols=143  Identities=20%  Similarity=0.321  Sum_probs=120.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++.+.+++.++++|||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +.+++||||||+||+++
T Consensus        64 v~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~  135 (376)
T cd05598          64 VKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRL-----GIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILID  135 (376)
T ss_pred             ceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEEC
Confidence            56788999999999999999999999998653     45778888889999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCC------------------------------------------cceeeeeecccccccCccc
Q 031436           81 EQSVAKLFDFSYSESIPEG------------------------------------------ETRIRGRVMGTFGYLPPEY  118 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~------------------------------------------~~~~~~~~~~~~~~~ape~  118 (159)
                      .++.++++|||++..+...                                          .........|+..|+|||.
T Consensus       136 ~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  215 (376)
T cd05598         136 RDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEV  215 (376)
T ss_pred             CCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHH
Confidence            9999999999986422100                                          0000112357889999999


Q ss_pred             cccCCCCCCcceEeccccccCcceecccccccCC
Q 031436          119 IATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus       119 ~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +.+..++.++|+||+||++ |+|++|+.||.+.+
T Consensus       216 ~~~~~~~~~~DiwSlGvil-yell~G~~Pf~~~~  248 (376)
T cd05598         216 LLRTGYTQLCDWWSVGVIL-YEMLVGQPPFLADT  248 (376)
T ss_pred             HcCCCCCcceeeeecccee-eehhhCCCCCCCCC
Confidence            9999999999999999999 99999999998765

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.97  E-value=3e-31  Score=191.90  Aligned_cols=143  Identities=21%  Similarity=0.295  Sum_probs=121.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCC-CCeEEecCCCCCEEe
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS-RPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~-~~~~h~~l~~~nil~   79 (159)
                      +++++++..++..++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   + .+++||||||.||++
T Consensus        58 ~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH---~~~~ivHrDikp~NIll  129 (325)
T cd05594          58 TALKYSFQTHDRLCFVMEYANGGELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLML  129 (325)
T ss_pred             CceEEEEEcCCEEEEEEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCCCCeEEE
Confidence            45778888889999999999999998887643     45788889999999999999999   6 799999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           80 QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      +.++.+|++|||++......... .....++..|+|||.+.+..++.++|+||||+++ |+|++|+.||.+.+.
T Consensus       130 ~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~el~tG~~Pf~~~~~  201 (325)
T cd05594         130 DKDGHIKITDFGLCKEGIKDGAT-MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM-YEMMCGRLPFYNQDH  201 (325)
T ss_pred             CCCCCEEEecCCCCeecCCCCcc-cccccCCcccCCHHHHccCCCCCcccccccccee-eeeccCCCCCCCCCH
Confidence            99999999999987654322211 1234578899999999988999999999999999 999999999977653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.2e-31  Score=196.12  Aligned_cols=143  Identities=22%  Similarity=0.324  Sum_probs=120.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..|+||||+++|+|.+.+...     ..+++..+..++.|++.||.|||   +++++||||||+||+++
T Consensus        64 v~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~  135 (377)
T cd05629          64 VSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKY-----DTFSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILID  135 (377)
T ss_pred             ceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEC
Confidence            57889999999999999999999999988654     45778888889999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcc------------e----------------------------------eeeeeccccccc
Q 031436           81 EQSVAKLFDFSYSESIPEGET------------R----------------------------------IRGRVMGTFGYL  114 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~------------~----------------------------------~~~~~~~~~~~~  114 (159)
                      .++.++++|||++........            .                                  ......|+..|+
T Consensus       136 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  215 (377)
T cd05629         136 RGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYI  215 (377)
T ss_pred             CCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCcccc
Confidence            999999999998753211000            0                                  000135788899


Q ss_pred             CccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436          115 PPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus       115 ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      |||.+.+..++.++|+||+||++ |+|++|..||.+.+
T Consensus       216 aPE~~~~~~~~~~~DiwSlGvil-~elltG~~Pf~~~~  252 (377)
T cd05629         216 APEIFLQQGYGQECDWWSLGAIM-FECLIGWPPFCSEN  252 (377)
T ss_pred             CHHHHccCCCCCceeeEecchhh-hhhhcCCCCCCCCC
Confidence            99999988999999999999999 99999999997654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.97  E-value=2.1e-31  Score=193.26  Aligned_cols=144  Identities=22%  Similarity=0.307  Sum_probs=122.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..+++|||+++|+|.+.+....    ..+++.....++.|++.|+.|+|   +++++||||||.||+++
T Consensus        64 ~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~----~~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~  136 (331)
T cd05624          64 TTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFE----DRLPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLD  136 (331)
T ss_pred             eeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEc
Confidence            357788888899999999999999999987532    45778888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-----CCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-----GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-----~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+|++|||++...............++..|+|||.+.+     ..++.++|+||||+++ |+|++|+.||.+.+
T Consensus       137 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil-~ell~g~~Pf~~~~  212 (331)
T cd05624         137 MNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCM-YEMLYGETPFYAES  212 (331)
T ss_pred             CCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhh-hhhhhCCCCccCCC
Confidence            99999999999887654433222233458889999999865     4578899999999999 99999999997654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.97  E-value=1.9e-31  Score=195.40  Aligned_cols=143  Identities=20%  Similarity=0.343  Sum_probs=121.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++.+.+++..++||||+++|+|.+.+...     ..+++.....++.|++.|+.|||   +++++||||||+||+++
T Consensus        64 v~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~  135 (360)
T cd05627          64 VKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKK-----DTLSEEATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLD  135 (360)
T ss_pred             eeEEEEEEcCCEEEEEEeCCCCccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEEC
Confidence            46788888889999999999999999988654     45788888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcc----------------------------------eeeeeecccccccCccccccCCCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGET----------------------------------RIRGRVMGTFGYLPPEYIATGDCNE  126 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~ape~~~~~~~~~  126 (159)
                      .++.++++|||++........                                  .......|+..|+|||++.+..++.
T Consensus       136 ~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~  215 (360)
T cd05627         136 AKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNK  215 (360)
T ss_pred             CCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCC
Confidence            999999999998764321100                                  0011235788999999999999999


Q ss_pred             CcceEeccccccCcceecccccccCC
Q 031436          127 KCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus       127 ~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ++|+||+||++ |+|++|+.||.+.+
T Consensus       216 ~~DiwSlGvil-yel~tG~~Pf~~~~  240 (360)
T cd05627         216 LCDWWSLGVIM-YEMLIGYPPFCSET  240 (360)
T ss_pred             cceecccccee-eecccCCCCCCCCC
Confidence            99999999999 99999999997754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.97  E-value=1.2e-31  Score=197.16  Aligned_cols=142  Identities=21%  Similarity=0.313  Sum_probs=121.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..+++|||+++|+|.+++..      ..++......++.|++.|+.|||   +++++||||||+||+++
T Consensus       106 v~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~------~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll~  176 (371)
T cd05622         106 VQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN------YDVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLD  176 (371)
T ss_pred             CeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEEC
Confidence            5678899988999999999999999998854      34677888889999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCC----CCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD----CNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~----~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+|++|||++...............+++.|+|||.+.+..    ++.++|+||+||++ |+|++|+.||.+.+
T Consensus       177 ~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvil-yell~G~~Pf~~~~  251 (371)
T cd05622         177 KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL-YEMLVGDTPFYADS  251 (371)
T ss_pred             CCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHH-HHHHhCCCCCCCCC
Confidence            9999999999998765433222223446889999999987543    78999999999999 99999999998754

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.97  E-value=1.3e-31  Score=197.61  Aligned_cols=143  Identities=20%  Similarity=0.319  Sum_probs=120.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++.+.+++.+++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        64 v~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-----~~~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~  135 (382)
T cd05625          64 VRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRM-----GIFPEDLARFYIAELTCAVESVH---KMGFIHRDIKPDNILID  135 (382)
T ss_pred             CeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEC
Confidence            57889999999999999999999999988654     35778888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCc----------------------------------------------ceeeeeeccccccc
Q 031436           81 EQSVAKLFDFSYSESIPEGE----------------------------------------------TRIRGRVMGTFGYL  114 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~~  114 (159)
                      .++.+|++|||++.......                                              ........|+..|+
T Consensus       136 ~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~  215 (382)
T cd05625         136 RDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYI  215 (382)
T ss_pred             CCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccC
Confidence            99999999999864321000                                              00011235788999


Q ss_pred             CccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436          115 PPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus       115 ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      |||.+.+..++.++|+||+||++ |+|++|+.||.+.+
T Consensus       216 aPE~~~~~~~~~~~DiwSlGvil-~elltG~~Pf~~~~  252 (382)
T cd05625         216 APEVLLRTGYTQLCDWWSVGVIL-YEMLVGQPPFLAQT  252 (382)
T ss_pred             CHHHhcCCCCCCeeeEEechHHH-HHHHhCCCCCCCCC
Confidence            99999999999999999999999 99999999998754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.97  E-value=1.1e-31  Score=195.26  Aligned_cols=139  Identities=22%  Similarity=0.327  Sum_probs=122.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..+++|||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +.+++||||+|.||+++
T Consensus        94 v~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~  165 (340)
T PTZ00426         94 VNLYGSFKDESYLYLVLEFVIGGEFFTFLRRN-----KRFPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLD  165 (340)
T ss_pred             cceEEEEEeCCEEEEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEEC
Confidence            57889999999999999999999999988654     45788888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.++++|||++.......    ....+++.|+|||.+.+..++.++|+||+||++ |+|++|+.||.+.+
T Consensus       166 ~~~~ikL~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil-~ell~G~~Pf~~~~  232 (340)
T PTZ00426        166 KDGFIKMTDFGFAKVVDTRT----YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFI-YEILVGCPPFYANE  232 (340)
T ss_pred             CCCCEEEecCCCCeecCCCc----ceecCChhhcCHHHHhCCCCCccccccchhhHH-HHHhcCCCCCCCCC
Confidence            99999999999887553221    234578899999999988899999999999999 99999999998754

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.97  E-value=2.3e-31  Score=192.96  Aligned_cols=142  Identities=24%  Similarity=0.295  Sum_probs=120.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++..++..+++|||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        68 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~  139 (332)
T cd05614          68 VTLHYAFQTEAKLHLILDYVSGGEMFTHLYQR-----DNFSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLD  139 (332)
T ss_pred             ccEEEEEecCCEEEEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEEC
Confidence            35678888888999999999999999988653     45788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .++.++++|||++...............++..|+|||.+.+. .++.++|+||||+++ |+|++|+.||...
T Consensus       140 ~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il-~elltg~~pf~~~  210 (332)
T cd05614         140 SEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILI-FELLTGASPFTLE  210 (332)
T ss_pred             CCCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhh-hhhhcCCCCCCCC
Confidence            999999999998876543332222234678899999999865 478899999999999 9999999999754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.97  E-value=2.1e-31  Score=193.23  Aligned_cols=144  Identities=24%  Similarity=0.317  Sum_probs=121.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+.+.+++||||+++|+|.+.+....    ..+++..+..++.|++.++.|+|   +.+++||||||+||+++
T Consensus        64 ~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~----~~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~  136 (332)
T cd05623          64 TTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFE----DRLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMD  136 (332)
T ss_pred             eeEEEEEecCCEEEEEEeccCCCcHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEC
Confidence            356788888899999999999999999987532    35788888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccc-----cCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA-----TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~-----~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||++...............++..|+|||++.     ...++.++|+||||+++ |+|++|+.||...+
T Consensus       137 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil-~ell~g~~Pf~~~~  212 (332)
T cd05623         137 MNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCM-YEMLYGETPFYAES  212 (332)
T ss_pred             CCCCEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHH-HHHhcCCCCCCCCC
Confidence            9999999999988665433322223346789999999986     34578999999999999 99999999998764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.97  E-value=1e-31  Score=193.71  Aligned_cols=142  Identities=27%  Similarity=0.387  Sum_probs=122.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++..++..++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +.+++||||+|+||+++
T Consensus        59 ~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~-----~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~  130 (316)
T cd05592          59 THLFCTFQTKEHLFFVMEYLNGGDLMFHIQSS-----GRFDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLD  130 (316)
T ss_pred             cceeeEEEcCCEEEEEEcCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEEC
Confidence            46788888888999999999999999888653     35788888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..+|++|||++....... .......++..|+|||.+.+..++.++|+||||+++ |+|++|+.||.+.+
T Consensus       131 ~~~~~kL~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il-~ell~G~~Pf~~~~  200 (316)
T cd05592         131 KDGHIKIADFGMCKENMNGE-GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLL-YEMLIGQSPFHGED  200 (316)
T ss_pred             CCCCEEEccCcCCeECCCCC-CccccccCCccccCHHHHcCCCCCCcccchhHHHHH-HHHHhCCCCCCCCC
Confidence            99999999999887543322 122334578899999999988999999999999999 99999999998765

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.97  E-value=2.1e-31  Score=196.49  Aligned_cols=143  Identities=21%  Similarity=0.311  Sum_probs=120.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++.++++|||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +.+++||||||+||+++
T Consensus        64 v~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-----~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~  135 (381)
T cd05626          64 VKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRM-----EVFPEVLARFYIAELTLAIESVH---KMGFIHRDIKPDNILID  135 (381)
T ss_pred             eeeEEEEecCCEEEEEEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEEC
Confidence            57889999999999999999999999988654     45778888889999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCc----------------------------------------------ceeeeeeccccccc
Q 031436           81 EQSVAKLFDFSYSESIPEGE----------------------------------------------TRIRGRVMGTFGYL  114 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~~  114 (159)
                      .++.++++|||++.......                                              ........|+..|+
T Consensus       136 ~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~  215 (381)
T cd05626         136 LDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYI  215 (381)
T ss_pred             CCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCcccc
Confidence            99999999999864321000                                              00011235788999


Q ss_pred             CccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436          115 PPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus       115 ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      |||.+.+..++.++|+|||||++ |+|++|+.||...+
T Consensus       216 aPE~~~~~~~~~~~DiwSlG~il-~elltG~~Pf~~~~  252 (381)
T cd05626         216 APEVLLRKGYTQLCDWWSVGVIL-FEMLVGQPPFLAPT  252 (381)
T ss_pred             CHHHHcCCCCCCccceeehhhHH-HHHHhCCCCCcCCC
Confidence            99999988899999999999999 99999999997654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3.4e-32  Score=214.00  Aligned_cols=150  Identities=29%  Similarity=0.476  Sum_probs=129.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCC--CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ--PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      |+++|+|.+....++++|||++|+|..++++.+.  .....++..+.+.++.|++.|+.||+   +++++||||..+|+|
T Consensus       758 v~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRNCL  834 (1025)
T KOG1095|consen  758 VSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAARNCL  834 (1025)
T ss_pred             eeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhhhhee
Confidence            6899999999999999999999999999987642  12356788889999999999999999   999999999999999


Q ss_pred             ecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCCc
Q 031436           79 FQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDWK  154 (159)
Q Consensus        79 ~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~~  154 (159)
                      ++.+..+|++|||+++.+.+... +.......+.+|||||++....|+.|+|||||||++ ||+++ |..||++.+-.
T Consensus       835 L~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVll-WEifslG~~PY~~~~n~  911 (1025)
T KOG1095|consen  835 LDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLL-WEIFSLGATPYPSRSNF  911 (1025)
T ss_pred             ecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHH-HHHHhCCCCCCCCcchH
Confidence            99999999999999995544332 233334567899999999999999999999999999 88887 89999987644

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.5e-31  Score=192.88  Aligned_cols=140  Identities=21%  Similarity=0.262  Sum_probs=122.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..+++|||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||+|+||+++
T Consensus        64 v~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~  135 (333)
T cd05600          64 VKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNL-----GVLSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLID  135 (333)
T ss_pred             ccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEC
Confidence            46788999999999999999999999998653     45788888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+..+|++|||++......    .....++..|+|||.+.+..++.++|+||+|+++ |+|++|+.||...+.
T Consensus       136 ~~~~~kL~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il-~ell~g~~pf~~~~~  203 (333)
T cd05600         136 ASGHIKLTDFGLSKGIVTY----ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCML-YEFLCGFPPFSGSTP  203 (333)
T ss_pred             CCCCEEEEeCcCCcccccc----cCCcccCccccChhHhcCCCCCCccceecchHHH-hhhhhCCCCCCCCCH
Confidence            9999999999988755331    1234578899999999998999999999999999 999999999987543

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.97  E-value=1.5e-31  Score=193.41  Aligned_cols=142  Identities=27%  Similarity=0.378  Sum_probs=121.8

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++++++...+..++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +.+++||||||+||+++.
T Consensus        65 ~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~  136 (323)
T cd05616          65 QLHSCFQTMDRLYFVMEYVNGGDLMYQIQQV-----GRFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDS  136 (323)
T ss_pred             eEEEEEecCCEEEEEEcCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECC
Confidence            4678888888999999999999999888654     45788889999999999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      +..+|++|||++........ ......+++.|+|||.+.+..++.++|+|||||++ |+|++|+.||.+.+.
T Consensus       137 ~~~~kL~DfG~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil-~elltg~~Pf~~~~~  206 (323)
T cd05616         137 EGHIKIADFGMCKENMWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL-YEMLAGQAPFEGEDE  206 (323)
T ss_pred             CCcEEEccCCCceecCCCCC-ccccCCCChhhcCHHHhcCCCCCCccchhchhHHH-HHHHhCCCCCCCCCH
Confidence            99999999998765432221 12234578899999999999999999999999999 999999999987653

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2e-31  Score=195.44  Aligned_cols=143  Identities=21%  Similarity=0.329  Sum_probs=122.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..+++|||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||.||+++
T Consensus        64 v~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~  135 (364)
T cd05599          64 VKLYYSFQDENYLYLIMEYLPGGDMMTLLMKK-----DTFTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLD  135 (364)
T ss_pred             cceEEEEEcCCeEEEEECCCCCcHHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEEC
Confidence            56889999999999999999999999988653     45788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcce-------------------------------------eeeeecccccccCccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETR-------------------------------------IRGRVMGTFGYLPPEYIATGD  123 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~ape~~~~~~  123 (159)
                      .++.++++|||++.........                                     ......|++.|+|||.+....
T Consensus       136 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  215 (364)
T cd05599         136 AKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTG  215 (364)
T ss_pred             CCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCC
Confidence            9999999999987654321100                                     001234788999999999889


Q ss_pred             CCCCcceEeccccccCcceecccccccCC
Q 031436          124 CNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus       124 ~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ++.++|+|||||++ |+|++|..||.+.+
T Consensus       216 ~~~~~DiwSlG~il-~el~~G~~Pf~~~~  243 (364)
T cd05599         216 YNKECDWWSLGVIM-YEMLVGYPPFCSDN  243 (364)
T ss_pred             CCCeeeeecchhHH-HHhhcCCCCCCCCC
Confidence            99999999999999 99999999998754

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.97  E-value=2.4e-31  Score=192.12  Aligned_cols=143  Identities=20%  Similarity=0.311  Sum_probs=122.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +.+++||||+|+||+++
T Consensus        59 ~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~  130 (321)
T cd05591          59 TALHCCFQTKDRLFFVMEYVNGGDLMFQIQRS-----RKFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLD  130 (321)
T ss_pred             cceeeEEEcCCeEEEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEEC
Confidence            46788999999999999999999999888654     35778888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.++++|||++........ ......++..|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+.
T Consensus       131 ~~~~~kL~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il-~el~tg~~Pf~~~~~  201 (321)
T cd05591         131 AEGHCKLADFGMCKEGILNGV-TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLM-YEMMAGQPPFEADNE  201 (321)
T ss_pred             CCCCEEEeecccceecccCCc-cccccccCccccCHHHHcCCCCCCccceechhHHH-HHHhcCCCCCCCCCH
Confidence            999999999998765432221 12234578899999999988999999999999999 999999999987653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=1.5e-31  Score=190.89  Aligned_cols=145  Identities=26%  Similarity=0.326  Sum_probs=124.5

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      +|++.++.+...|++||||+||+|.....++..   +.++++.+..++.+++.||+|||   -.|++.|||||+|||+-.
T Consensus       141 TLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~---~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvre  214 (459)
T KOG0610|consen  141 TLYASFETDKYSCLVMEYCPGGDLHSLRQKQPG---KRFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVRE  214 (459)
T ss_pred             hhhheeeccceeEEEEecCCCccHHHHHhhCCC---CccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEec
Confidence            578999999999999999999999888876543   78999999999999999999999   999999999999999999


Q ss_pred             CCceEEEecCCCcccCCC--------------------------------c-c----------------------eeeee
Q 031436           82 QSVAKLFDFSYSESIPEG--------------------------------E-T----------------------RIRGR  106 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~--------------------------------~-~----------------------~~~~~  106 (159)
                      ++++-+.||.++......                                . .                      .....
T Consensus       215 dGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnS  294 (459)
T KOG0610|consen  215 DGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNS  294 (459)
T ss_pred             CCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccc
Confidence            999999999875421100                                0 0                      01134


Q ss_pred             ecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436          107 VMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus       107 ~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      +.||-+|+|||++.|...+.++|||+||+++ |||+.|..||.|.+-
T Consensus       295 FVGThEYlAPEvI~G~GHgsAVDWWtfGIfl-YEmLyG~TPFKG~~~  340 (459)
T KOG0610|consen  295 FVGTHEYLAPEVIRGEGHGSAVDWWTFGIFL-YEMLYGTTPFKGSNN  340 (459)
T ss_pred             cccccccccceeeecCCCCchhhHHHHHHHH-HHHHhCCCCcCCCCc
Confidence            5577789999999999999999999999999 999999999998754

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.97  E-value=2.2e-31  Score=195.69  Aligned_cols=143  Identities=20%  Similarity=0.297  Sum_probs=120.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..++||||+++|+|.+.+..      ..+++.....++.|++.|+.|||   +.+++||||+|+||+++
T Consensus       106 v~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~------~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~  176 (370)
T cd05596         106 VQLHYAFQDDKYLYMVMEYMPGGDLVNLMSN------YDIPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLD  176 (370)
T ss_pred             ceEEEEEecCCEEEEEEcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEc
Confidence            4678888888999999999999999998854      24677888889999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC----CCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG----DCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~----~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.+|++|||++...............+++.|+|||.+.+.    .++.++|+|||||++ |+|++|+.||.+.+.
T Consensus       177 ~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvil-yelltG~~Pf~~~~~  252 (370)
T cd05596         177 KSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL-YEMLVGDTPFYADSL  252 (370)
T ss_pred             CCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHH-HHHHhCCCCcCCCCH
Confidence            999999999998876543222122234678999999998653    378999999999999 999999999987653

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3e-32  Score=213.15  Aligned_cols=141  Identities=23%  Similarity=0.333  Sum_probs=126.5

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      +++-.|.+.+++|+||||++||+|..++...     .+++++....|+.+++.||+-+|   +.|+||||+||+|||+|.
T Consensus       139 ~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~-----~~~pE~~ArFY~aEiVlAldslH---~mgyVHRDiKPDNvLld~  210 (1317)
T KOG0612|consen  139 QLHYAFQDERYLYLVMDYMPGGDLLTLLSKF-----DRLPEDWARFYTAEIVLALDSLH---SMGYVHRDIKPDNVLLDK  210 (1317)
T ss_pred             HHHHHhcCccceEEEEecccCchHHHHHhhc-----CCChHHHHHHHHHHHHHHHHHHH---hccceeccCCcceeEecc
Confidence            3445678889999999999999999999765     46899999999999999999999   999999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-----CCCCCCcceEeccccccCcceecccccccC
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-----GDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-----~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .+++|++|||.+..+..+..-......||+.|.+||++..     ..|++.+|+||+||++ |||+.|..||-..
T Consensus       211 ~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~-YEMlyG~TPFYad  284 (1317)
T KOG0612|consen  211 SGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFM-YEMLYGETPFYAD  284 (1317)
T ss_pred             cCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHH-HHHHcCCCcchHH
Confidence            9999999999998887676666677899999999999853     4589999999999999 9999999999654

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.97  E-value=6.4e-31  Score=190.51  Aligned_cols=144  Identities=22%  Similarity=0.320  Sum_probs=121.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..++||||+++|+|.+.+....    ..+++..+..++.|++.|+.|+|   +.+++||||+|+||+++
T Consensus        64 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~  136 (330)
T cd05601          64 PQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYE----DQFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLID  136 (330)
T ss_pred             cceeeEEecCCeEEEEECCCCCCCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCchHheEEC
Confidence            356788888889999999999999999887542    45788888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccc------cCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA------TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~------~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+|++|||++...............++..|+|||.+.      ...++.++|+||||+++ |+|++|+.||...+
T Consensus       137 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il-~el~~g~~Pf~~~~  213 (330)
T cd05601         137 RTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIA-YEMIYGRSPFHEGT  213 (330)
T ss_pred             CCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeeccccee-eeeccCCCCCCCCC
Confidence            9999999999998766443322222335788999999986      44578999999999999 99999999997654

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.97  E-value=5.5e-31  Score=190.54  Aligned_cols=142  Identities=27%  Similarity=0.317  Sum_probs=122.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++.+..++..+++|||+++|+|...+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        59 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~  130 (325)
T cd05604          59 VGLHYSFQTTEKLYFVLDFVNGGELFFHLQRE-----RSFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLD  130 (325)
T ss_pred             ccEEEEEecCCEEEEEEcCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEEC
Confidence            46788899899999999999999998877543     45788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.++++|||++........ ......++..|+|||.+.+..++.++|+||+|+++ |+|++|..||.+.+
T Consensus       131 ~~~~~kL~DfG~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il-~el~~G~~pf~~~~  200 (325)
T cd05604         131 SQGHVVLTDFGLCKEGIAQSD-TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVL-YEMLYGLPPFYCRD  200 (325)
T ss_pred             CCCCEEEeecCCcccCCCCCC-CcccccCChhhCCHHHHcCCCCCCcCcccccccee-hhhhcCCCCCCCCC
Confidence            999999999998765322221 11234578899999999999999999999999999 99999999998764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.97  E-value=3.9e-31  Score=191.63  Aligned_cols=143  Identities=22%  Similarity=0.298  Sum_probs=122.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++..++..++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        58 v~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~  129 (328)
T cd05593          58 TSLKYSFQTKDRLCFVMEYVNGGELFFHLSRE-----RVFSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLD  129 (328)
T ss_pred             cceEEEEEcCCEEEEEEeCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEEC
Confidence            45778888889999999999999998887653     45788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.+|++|||++......... .....++..|+|||.+.+..++.++|+||+|+++ |+|++|+.||...+.
T Consensus       130 ~~~~~kL~DfG~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil-~elltG~~Pf~~~~~  200 (328)
T cd05593         130 KDGHIKITDFGLCKEGITDAAT-MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM-YEMMCGRLPFYNQDH  200 (328)
T ss_pred             CCCcEEEecCcCCccCCCcccc-cccccCCcCccChhhhcCCCCCccCCccccchHH-HHHhhCCCCCCCCCH
Confidence            9999999999987653322211 1234578899999999988899999999999999 999999999977554

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=4.1e-31  Score=190.24  Aligned_cols=142  Identities=22%  Similarity=0.281  Sum_probs=122.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..+++|||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||+|.||+++
T Consensus        56 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~  127 (312)
T cd05585          56 VPLKFSFQSPEKLYLVLAFINGGELFHHLQRE-----GRFDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLD  127 (312)
T ss_pred             eceeeEEecCCeEEEEEcCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEEC
Confidence            46778888889999999999999999988653     35788888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.++++|||++........ ......++..|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       128 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil-~el~tg~~pf~~~~  197 (312)
T cd05585         128 YQGHIALCDFGLCKLNMKDDD-KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLL-YEMLTGLPPFYDEN  197 (312)
T ss_pred             CCCcEEEEECcccccCccCCC-ccccccCCcccCCHHHHcCCCCCCccceechhHHH-HHHHhCCCCcCCCC
Confidence            999999999998765432221 12234578899999999999999999999999999 99999999997654

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.97  E-value=5.8e-31  Score=190.30  Aligned_cols=143  Identities=26%  Similarity=0.319  Sum_probs=122.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++.+.+++..+++|||+++|+|.+.+...     ..+++.....++.|++.|+.|||   +++++||||+|.||+++
T Consensus        59 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~  130 (323)
T cd05575          59 VGLHYSFQTADKLYFVLDYVNGGELFFHLQRE-----RSFPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLD  130 (323)
T ss_pred             CCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEEC
Confidence            46778888889999999999999998888653     45788888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.+|++|||++........ ......++..|+|||.+.+..++.++|+||||+++ |+|++|..||.+.+.
T Consensus       131 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il-~ell~g~~pf~~~~~  201 (323)
T cd05575         131 SQGHVVLTDFGLCKEGIEHSK-TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVL-YEMLYGLPPFYSRDT  201 (323)
T ss_pred             CCCcEEEeccCCCcccccCCC-ccccccCChhhcChhhhcCCCCCccccccccchhh-hhhhcCCCCCCCCCH
Confidence            999999999998765432221 12234578899999999998999999999999999 999999999987643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.97  E-value=3.4e-31  Score=191.58  Aligned_cols=142  Identities=27%  Similarity=0.385  Sum_probs=121.0

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++++++.+.+..+++|||+++|+|.+.+...     ..+++.....++.|++.|+.|||   +++++||||||+||+++.
T Consensus        65 ~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~  136 (324)
T cd05587          65 QLHSCFQTMDRLYFVMEYVNGGDLMYHIQQV-----GKFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDA  136 (324)
T ss_pred             eeEEEEEcCCEEEEEEcCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcC
Confidence            4677888888999999999999999888653     35778888999999999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      ++.++++|||++........ ......++..|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+.
T Consensus       137 ~~~~kL~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil-~elltG~~pf~~~~~  206 (324)
T cd05587         137 EGHIKIADFGMCKENIFGGK-TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL-YEMLAGQPPFDGEDE  206 (324)
T ss_pred             CCCEEEeecCcceecCCCCC-ceeeecCCccccChhhhcCCCCCcccchhhhHHHH-HHHHhCCCCCCCCCH
Confidence            99999999998764322211 12234578899999999999999999999999999 999999999987653

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.97  E-value=3.4e-31  Score=191.97  Aligned_cols=139  Identities=20%  Similarity=0.398  Sum_probs=122.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..+++|||+++|+|.+.+...     ..+++.....++.|++.|+.|||   +++++||||+|+||+++
T Consensus        81 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~  152 (329)
T PTZ00263         81 VNMMCSFQDENRVYFLLEFVVGGELFTHLRKA-----GRFPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLD  152 (329)
T ss_pred             CcEEEEEEcCCEEEEEEcCCCCChHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEC
Confidence            56889999999999999999999999988654     45778888889999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+|++|||++........    ...+++.|+|||.+.+..++.++|+||||+++ |+|++|+.||.+.+
T Consensus       153 ~~~~~kl~Dfg~~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~elltg~~pf~~~~  219 (329)
T PTZ00263        153 NKGHVKVTDFGFAKKVPDRTF----TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLL-YEFIAGYPPFFDDT  219 (329)
T ss_pred             CCCCEEEeeccCceEcCCCcc----eecCChhhcCHHHHcCCCCCCcceeechHHHH-HHHHcCCCCCCCCC
Confidence            999999999998876543221    24578899999999998899999999999999 99999999997654

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.97  E-value=6.6e-31  Score=189.83  Aligned_cols=142  Identities=27%  Similarity=0.330  Sum_probs=121.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+.+..+++|||+++|+|...+...     ..+++..+..++.|++.|+.|||   +.+++||||||.||+++
T Consensus        59 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~  130 (321)
T cd05603          59 VGLHYSFQTAEKLYFVLDYVNGGELFFHLQRE-----RCFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLD  130 (321)
T ss_pred             cceeeEEEcCCEEEEEEcCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEEC
Confidence            46788888889999999999999998877543     45778888889999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+|++|||++........ ......++..|+|||.+.+..++.++|+||+||++ |+|++|+.||.+.+
T Consensus       131 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~el~~g~~pf~~~~  200 (321)
T cd05603         131 SQGHVVLTDFGLCKEGVEPEE-TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVL-YEMLYGLPPFYSRD  200 (321)
T ss_pred             CCCCEEEccCCCCccCCCCCC-ccccccCCcccCCHHHhcCCCCCCcCcccccchhh-hhhhcCCCCCCCCC
Confidence            999999999998765322221 12234578899999999988899999999999999 99999999998765

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.97  E-value=4e-31  Score=188.06  Aligned_cols=143  Identities=25%  Similarity=0.382  Sum_probs=121.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++++||+++|+|.+.+.....   ..+++..+..++.|++.|+.|||   +.+++||||||+||+++
T Consensus        63 v~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~  136 (285)
T cd05631          63 VSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGN---PGFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLD  136 (285)
T ss_pred             EEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEEC
Confidence            3567888888899999999999999887754321   35788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||++........  .....++..|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       137 ~~~~~kl~Dfg~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil-~el~~g~~pf~~~~  205 (285)
T cd05631         137 DRGHIRISDLGLAVQIPEGET--VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLI-YEMIQGQSPFRKRK  205 (285)
T ss_pred             CCCCEEEeeCCCcEEcCCCCe--ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHH-HHHHhCCCCCCCCC
Confidence            999999999998876533221  1223578899999999999999999999999999 99999999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.97  E-value=6e-31  Score=190.37  Aligned_cols=142  Identities=25%  Similarity=0.313  Sum_probs=121.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..+++|||+++|+|.+.+...     ..+.......++.|++.|+.|||   +++++||||||+||+++
T Consensus        59 v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~  130 (325)
T cd05602          59 VGLHFSFQTADKLYFVLDYINGGELFYHLQRE-----RCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLD  130 (325)
T ss_pred             CceeEEEEcCCeEEEEEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEC
Confidence            46788888889999999999999999988653     34677788889999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.++++|||++........ ......++..|+|||.+.+..++.++|+||+|+++ |+|++|..||.+.+
T Consensus       131 ~~~~~kl~DfG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~el~~g~~pf~~~~  200 (325)
T cd05602         131 SQGHIVLTDFGLCKENIEHNG-TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVL-YEMLYGLPPFYSRN  200 (325)
T ss_pred             CCCCEEEccCCCCcccccCCC-CcccccCCccccCHHHHcCCCCCCccccccccHHH-HHHhcCCCCCCCCC
Confidence            999999999998865432221 12234578899999999999999999999999999 99999999997754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.97  E-value=3e-31  Score=191.60  Aligned_cols=143  Identities=22%  Similarity=0.307  Sum_probs=122.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++...+.+++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +.+++||||+|.||+++
T Consensus        59 v~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~-----~~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~  130 (320)
T cd05590          59 TQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKS-----RRFDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLD  130 (320)
T ss_pred             hceeeEEEcCCEEEEEEcCCCCchHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEEC
Confidence            46788888889999999999999999888654     45788888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+..++++|||++........ ......++..|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+.
T Consensus       131 ~~~~~kL~DfG~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~el~~g~~Pf~~~~~  201 (320)
T cd05590         131 HEGHCKLADFGMCKEGIFNGK-TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLL-YEMLCGHAPFEAENE  201 (320)
T ss_pred             CCCcEEEeeCCCCeecCcCCC-cccccccCccccCHHHHcCCCCCCccchhhhHHHH-HHHhhCCCCCCCCCH
Confidence            999999999998765432221 12234578899999999988899999999999999 999999999987653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=6.8e-31  Score=190.56  Aligned_cols=144  Identities=22%  Similarity=0.316  Sum_probs=121.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..++||||+++|+|.+.+....    ..+++..+..++.|++.|+.|||   +++++||||||.||+++
T Consensus        64 ~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~  136 (331)
T cd05597          64 TNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFE----DRLPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLD  136 (331)
T ss_pred             CceEEEEecCCeEEEEEecCCCCcHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEEC
Confidence            467888999999999999999999999886532    45788888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-----CCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-----GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-----~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.++++|||++...............+++.|+|||.+..     ..++.++|+||+||++ |+|++|+.||.+.+
T Consensus       137 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l-~el~~g~~Pf~~~~  212 (331)
T cd05597         137 KNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCM-YEMLYGETPFYAES  212 (331)
T ss_pred             CCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHH-HHHhhCCCCCCCCC
Confidence            99999999999876654332222223457889999999863     3478899999999999 99999999997754

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=5.6e-32  Score=193.78  Aligned_cols=146  Identities=21%  Similarity=0.290  Sum_probs=131.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +.++.+|+......+||||.++|.|++.+.+.     ..+++.+..++.+||++++.|+|   +++++|||||.+|||+|
T Consensus       116 I~IyEVFENkdKIvivMEYaS~GeLYDYiSer-----~~LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD  187 (668)
T KOG0611|consen  116 IQIYEVFENKDKIVIVMEYASGGELYDYISER-----GSLSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLD  187 (668)
T ss_pred             eehhhhhcCCceEEEEEEecCCccHHHHHHHh-----ccccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeec
Confidence            45678899999999999999999999999876     46899999999999999999999   99999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCC-CCCcceEeccccccCcceecccccccCCCcccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC-NEKCDVYSFDGSRDSGHLTGRAWYRSEDWKPAV  157 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~-~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~~~~  157 (159)
                      .+.++|++|||++.-+...  +...+++|++.|.+||.+.+.+| .+.+|.||+|+++ |.+..|..||++.|.++.|
T Consensus       188 ~N~NiKIADFGLSNly~~~--kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLL-YtLVyGtMPFDG~Dhk~lv  262 (668)
T KOG0611|consen  188 QNNNIKIADFGLSNLYADK--KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLL-YTLVYGTMPFDGRDHKRLV  262 (668)
T ss_pred             CCCCeeeeccchhhhhccc--cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHH-HHHhhcccccCCchHHHHH
Confidence            9999999999998766433  23356889999999999999998 5889999999999 9999999999999877654

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.4e-32  Score=196.09  Aligned_cols=145  Identities=26%  Similarity=0.368  Sum_probs=126.4

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      +++.+|+.-.++|+||||+.||+|.-.+...     ..+.++..+.++.+|+.||-+||   +++|+.||||.+|++++.
T Consensus       414 qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ~-----GkFKEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~  485 (683)
T KOG0696|consen  414 QLHSCFQTMDRLYFVMEYVNGGDLMYHIQQV-----GKFKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDS  485 (683)
T ss_pred             HHHHHhhhhhheeeEEEEecCchhhhHHHHh-----cccCCchhhhhhHHHHHHhhhhh---cCCeeeeeccccceEecc
Confidence            3455667778899999999999999887543     56778888999999999999999   999999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCCccc
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWKPA  156 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~~~  156 (159)
                      ++++|++|||+++.-.-... -+.++.|++.|+|||++.+++|+.++|+||||+++ |||+.|++||+++|....
T Consensus       486 eGHiKi~DFGmcKEni~~~~-TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLL-yEmlaGQpPFdGeDE~el  558 (683)
T KOG0696|consen  486 EGHIKIADFGMCKENIFDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL-YEMLAGQPPFDGEDEDEL  558 (683)
T ss_pred             CCceEeeecccccccccCCc-ceeeecCCCcccccceEEecccccchhHHHHHHHH-HHHHcCCCCCCCCCHHHH
Confidence            99999999999876443322 23467899999999999999999999999999999 999999999999987543

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.97  E-value=3.2e-31  Score=191.65  Aligned_cols=143  Identities=22%  Similarity=0.304  Sum_probs=122.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++..++..++||||+++|+|...+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        58 ~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~  129 (323)
T cd05595          58 TALKYAFQTHDRLCFVMEYANGGELFFHLSRE-----RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLD  129 (323)
T ss_pred             cceeeEEecCCEEEEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEc
Confidence            45778888889999999999999998887653     35788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.+|++|||++......... .....++..|+|||.+.+..++.++|+||||+++ |+|++|+.||.+.+.
T Consensus       130 ~~~~~kL~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil-~ell~g~~Pf~~~~~  200 (323)
T cd05595         130 KDGHIKITDFGLCKEGISDGAT-MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM-YEMMCGRLPFYNQDH  200 (323)
T ss_pred             CCCCEEecccHHhccccCCCCc-cccccCCcCcCCcccccCCCCCchhchhhhHHHH-HHHHhCCCCCCCCCH
Confidence            9999999999987653222211 1234578899999999988999999999999999 999999999977653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.6e-32  Score=198.72  Aligned_cols=145  Identities=19%  Similarity=0.267  Sum_probs=125.0

Q ss_pred             CeEEEEEecCC-CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe
Q 031436            1 MRLIGCCLETE-NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~   79 (159)
                      |++.+++.+.. .+++|||||. -+|+++++..+    ..+++..+..++.||+.||+|+|   ++|+.|||+||+|||+
T Consensus        72 ikL~Evi~d~~~~L~fVfE~Md-~NLYqLmK~R~----r~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi  143 (538)
T KOG0661|consen   72 IKLKEVIRDNDRILYFVFEFMD-CNLYQLMKDRN----RLFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILI  143 (538)
T ss_pred             hhhHHHhhccCceEeeeHHhhh-hhHHHHHhhcC----CcCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEe
Confidence            45666777666 8999999996 49999998753    78999999999999999999999   9999999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCCCccc
Q 031436           80 QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWKPA  156 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~~~  156 (159)
                      .....+||+|||+++.+.....  -+.+..|..|+|||++.. ..|+.+.|+|++||++ +|+.+-++.|+|.+..++
T Consensus       144 ~~~~~iKiaDFGLARev~SkpP--YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~-aEl~sLrPLFPG~sE~Dq  218 (538)
T KOG0661|consen  144 SGNDVIKIADFGLAREVRSKPP--YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIM-AELYSLRPLFPGASEIDQ  218 (538)
T ss_pred             cccceeEecccccccccccCCC--cchhhhcccccchHHhhhccccCCchHHHHHHHHH-HHHHHhcccCCCCcHHHH
Confidence            9888899999999998754432  244667888999999865 4589999999999999 999999999999876543

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.3e-30  Score=189.01  Aligned_cols=143  Identities=22%  Similarity=0.265  Sum_probs=120.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..+++|||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        59 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~  130 (330)
T cd05586          59 VGLKFSFQTDSDLYLVTDYMSGGELFWHLQKE-----GRFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLD  130 (330)
T ss_pred             cceEEEEecCCeEEEEEcCCCCChHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEEC
Confidence            35677888889999999999999999888643     45788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+..++++|||++........ ......++..|+|||.+.+. .++.++|+||+|+++ |+|++|+.||.+.+.
T Consensus       131 ~~~~~kl~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil-~elltG~~Pf~~~~~  202 (330)
T cd05586         131 ATGHIALCDFGLSKANLTDNK-TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLV-FEMCCGWSPFYAEDT  202 (330)
T ss_pred             CCCCEEEecCCcCcCCCCCCC-CccCccCCccccCHHHHcCCCCCCCccceeccccEE-EEeccCCCCCCCCCH
Confidence            999999999998765432221 12234578899999998764 479999999999999 999999999987654

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.97  E-value=4.1e-31  Score=190.58  Aligned_cols=143  Identities=23%  Similarity=0.320  Sum_probs=122.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        59 ~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~  130 (316)
T cd05620          59 THLYCTFQTKEHLFFVMEFLNGGDLMFHIQDK-----GRFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLD  130 (316)
T ss_pred             cCeeEEEEeCCEEEEEECCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEC
Confidence            46788888889999999999999999888653     35778888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.++++|||++........ ......++..|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+.
T Consensus       131 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil-~el~~g~~Pf~~~~~  201 (316)
T cd05620         131 RDGHIKIADFGMCKENVFGDN-RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLL-YEMLIGQSPFHGDDE  201 (316)
T ss_pred             CCCCEEeCccCCCeecccCCC-ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHH-HHHHhCCCCCCCCCH
Confidence            999999999998764322111 12234578899999999999999999999999999 999999999987643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=6.1e-31  Score=191.82  Aligned_cols=143  Identities=22%  Similarity=0.318  Sum_probs=122.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..++||||+++++|.+.+...     ..++...+..++.|++.|+.|||   +.+++|+||+|+||+++
T Consensus        64 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~  135 (350)
T cd05573          64 VKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRK-----DVFPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILID  135 (350)
T ss_pred             cchhhheecCCeEEEEEcCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEEC
Confidence            35677888889999999999999999988654     45788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCc----------------------------ceeeeeecccccccCccccccCCCCCCcceEe
Q 031436           81 EQSVAKLFDFSYSESIPEGE----------------------------TRIRGRVMGTFGYLPPEYIATGDCNEKCDVYS  132 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS  132 (159)
                      .+..++++|||++.......                            ........++..|+|||.+.+..++.++|+||
T Consensus       136 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS  215 (350)
T cd05573         136 ADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWS  215 (350)
T ss_pred             CCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEe
Confidence            99999999999887654322                            01112345788999999999999999999999


Q ss_pred             ccccccCcceecccccccCC
Q 031436          133 FDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus       133 ~g~~~~~~~~~g~~p~~~~~  152 (159)
                      |||++ |+|++|+.||...+
T Consensus       216 lG~il-~ell~g~~Pf~~~~  234 (350)
T cd05573         216 LGVIL-YEMLYGFPPFYSDT  234 (350)
T ss_pred             cchhh-hhhccCCCCCCCCC
Confidence            99999 99999999997754

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3.7e-31  Score=190.54  Aligned_cols=145  Identities=23%  Similarity=0.311  Sum_probs=124.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+.+.+|..++.+|+||.||++||+.+.++..=.   ..+.+..+..++.+++.||.|||   .+|.||||+|+-|||++
T Consensus        87 v~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~---~Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~  160 (516)
T KOG0582|consen   87 VTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYP---DGLEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILID  160 (516)
T ss_pred             ceEEEEEEecceeEEeehhhcCCcHHHHHHHHcc---ccccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEc
Confidence            4567888899999999999999999999875321   45888888999999999999999   99999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCccee--e-eeecccccccCcccccc--CCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRI--R-GRVMGTFGYLPPEYIAT--GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~--~-~~~~~~~~~~ape~~~~--~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+|++|||.+..+.....+.  . .++.+++.|||||++..  ..|+.|+||||||++. .|+++|+.||....
T Consensus       161 ~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA-~ELA~G~aPf~k~p  236 (516)
T KOG0582|consen  161 SDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITA-CELAHGHAPFSKYP  236 (516)
T ss_pred             CCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHH-HHHhcCCCCcccCC
Confidence            99999999999876655443222  2 45678999999999754  4699999999999999 99999999997654

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.97  E-value=7.9e-31  Score=189.93  Aligned_cols=140  Identities=23%  Similarity=0.329  Sum_probs=120.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++...+.+++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||+|+||+++
T Consensus        59 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-----~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~  130 (327)
T cd05617          59 VGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQ-----RKLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLD  130 (327)
T ss_pred             eeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEe
Confidence            46778888889999999999999998887643     45888999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceeccccccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      .+..+|++|||++........ ......++..|+|||.+.+..++.++|+||+|+++ |+|++|+.||..
T Consensus       131 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil-~ell~g~~pf~~  198 (327)
T cd05617         131 ADGHIKLTDYGMCKEGLGPGD-TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLM-FEMMAGRSPFDI  198 (327)
T ss_pred             CCCCEEEeccccceeccCCCC-ceecccCCcccCCHHHHCCCCCCchheeehhHHHH-HHHHhCCCCCCc
Confidence            999999999998765322211 12234578899999999999999999999999999 999999999964

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.97  E-value=8.3e-31  Score=189.96  Aligned_cols=139  Identities=22%  Similarity=0.341  Sum_probs=120.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++..++..+++|||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        59 v~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~-----~~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~  130 (329)
T cd05618          59 VGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLD  130 (329)
T ss_pred             CceeeEEEeCCEEEEEEeCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEC
Confidence            46788999999999999999999998877543     45788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYR  149 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~  149 (159)
                      .+..++++|||++........ ......++..|+|||.+.+..++.++|+||||+++ |+|++|+.||.
T Consensus       131 ~~~~~kL~DfG~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~el~~g~~Pf~  197 (329)
T cd05618         131 SEGHIKLTDYGMCKEGLRPGD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLM-FEMMAGRSPFD  197 (329)
T ss_pred             CCCCEEEeeCCccccccCCCC-ccccccCCccccCHHHHcCCCCCCccceecccHHH-HHHhhCCCCCc
Confidence            999999999998765322211 11234578899999999999999999999999999 99999999995

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.97  E-value=8.6e-31  Score=189.86  Aligned_cols=140  Identities=21%  Similarity=0.319  Sum_probs=121.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++..++.++++|||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||+|+||+++
T Consensus        59 v~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~-----~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~  130 (329)
T cd05588          59 VGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLD  130 (329)
T ss_pred             CceEEEEEcCCEEEEEEeCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEC
Confidence            46788999999999999999999998877543     45888999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceeccccccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      .+..++++|||++........ ......++..|+|||.+.+..++.++|+||+|+++ |++++|+.||..
T Consensus       131 ~~~~~kL~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l-~el~~g~~Pf~~  198 (329)
T cd05588         131 AEGHIKLTDYGMCKEGIRPGD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLM-FEMMAGRSPFDI  198 (329)
T ss_pred             CCCCEEECcCccccccccCCC-ccccccCCccccCHHHHcCCCCCCccceechHHHH-HHHHHCCCCccc
Confidence            999999999998764322211 11234578899999999998999999999999999 999999999964

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.97  E-value=1.8e-30  Score=187.33  Aligned_cols=143  Identities=26%  Similarity=0.333  Sum_probs=123.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +.+++|+||+|+||+++
T Consensus        61 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~  132 (318)
T cd05582          61 VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLD  132 (318)
T ss_pred             ccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEEC
Confidence            46789999999999999999999999988643     45788999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+..++++|||++........ ......++..|+|||.+.+..++.++|+||||+++ |+|++|+.||...+.
T Consensus       133 ~~~~~kL~Dfg~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il-~el~tg~~p~~~~~~  203 (318)
T cd05582         133 EEGHIKLTDFGLSKESIDHEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLM-FEMLTGSLPFQGKDR  203 (318)
T ss_pred             CCCcEEEeeccCCcccCCCCC-ceecccCChhhcCHHHHcCCCCCCccceeccceEe-eeeccCCCCCCCCCH
Confidence            999999999998775533321 12234578889999999988899999999999999 999999999987653

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.97  E-value=7.2e-31  Score=189.35  Aligned_cols=142  Identities=27%  Similarity=0.363  Sum_probs=122.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..+++|||+++|+|.+.+...     ..+++.....++.|++.|+.|||   +.+++||||+|.||+++
T Consensus        59 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~  130 (316)
T cd05619          59 THLYCTFQTKENLFFVMEYLNGGDLMFHIQSC-----HKFDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLD  130 (316)
T ss_pred             cceEEEEEeCCEEEEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEEC
Confidence            46788898889999999999999999988653     35778888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||++........ ......++..|+|||.+.+..++.++|+||+||++ |+|++|+.||.+.+
T Consensus       131 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il-~el~~G~~pf~~~~  200 (316)
T cd05619         131 TDGHIKIADFGMCKENMLGDA-KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLL-YEMLIGQSPFHGHD  200 (316)
T ss_pred             CCCCEEEccCCcceECCCCCC-ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHH-HHHHhCCCCCCCCC
Confidence            999999999998765322221 12234578899999999988999999999999999 99999999998765

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.97  E-value=1.1e-30  Score=188.87  Aligned_cols=143  Identities=24%  Similarity=0.341  Sum_probs=121.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++..++..+++|||+++++|.+.+...     ..+.+.....++.|++.|+.|||   +++++||||||.||+++
T Consensus        63 v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~  134 (323)
T cd05584          63 VDLIYAFQTGGKLYLILEYLSGGELFMHLERE-----GIFMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLD  134 (323)
T ss_pred             hceeeEEecCCeEEEEEeCCCCchHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEC
Confidence            46788899889999999999999999988653     45677788889999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.+|++|||++........ ......++..|+|||.+.+..++.++|+||+|+++ |+|++|+.||...+.
T Consensus       135 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~ell~G~~pf~~~~~  205 (323)
T cd05584         135 AQGHVKLTDFGLCKESIHEGT-VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALM-YDMLTGAPPFTAENR  205 (323)
T ss_pred             CCCCEEEeeCcCCeecccCCC-cccccCCCccccChhhccCCCCCCcceecccHHHH-HHHhcCCCCCCCCCH
Confidence            999999999998764332221 12234578899999999988899999999999999 999999999987653

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.97  E-value=6.3e-31  Score=190.17  Aligned_cols=142  Identities=25%  Similarity=0.370  Sum_probs=121.5

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++++++.+.+.+++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||+|.||+++.
T Consensus        65 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~-----~~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~  136 (323)
T cd05615          65 QLHSCFQTVDRLYFVMEYVNGGDLMYHIQQV-----GKFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDS  136 (323)
T ss_pred             heeeEEecCCEEEEEEcCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECC
Confidence            4667788888899999999999999888654     45788899999999999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      +..++++|||++........ ......++..|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+.
T Consensus       137 ~~~ikL~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil-~elltG~~pf~~~~~  206 (323)
T cd05615         137 EGHIKIADFGMCKEHMVDGV-TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLL-YEMLAGQPPFDGEDE  206 (323)
T ss_pred             CCCEEEeccccccccCCCCc-cccCccCCccccCHHHHcCCCCCCccchhhhHHHH-HHHHhCCCCCCCCCH
Confidence            99999999998765432221 11234578899999999988899999999999999 999999999987643

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.3e-32  Score=197.37  Aligned_cols=146  Identities=23%  Similarity=0.306  Sum_probs=127.7

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      +.+|.+..+..+|++||||.+|++.+.++..     ..+.+..+.-++++++.|+.|+|   ..+.+|||+|+.||++..
T Consensus        75 ~yygsyl~g~~LwiiMey~~gGsv~~lL~~~-----~~~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaanil~s~  146 (467)
T KOG0201|consen   75 EYYGSYLKGTKLWIIMEYCGGGSVLDLLKSG-----NILDEFEIAVILREVLKGLDYLH---SEKKIHRDIKAANILLSE  146 (467)
T ss_pred             hhhhheeecccHHHHHHHhcCcchhhhhccC-----CCCccceeeeehHHHHHHhhhhh---hcceecccccccceeEec
Confidence            3477888899999999999999999999765     23466666678899999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCCcccc
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWKPAV  157 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~~~~  157 (159)
                      ++.+|++|||.+...+....+ ..++.|+++|||||++....|+.++||||+|++. +||++|.+|+......+.+
T Consensus       147 ~g~vkl~DfgVa~ql~~~~~r-r~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITa-iEla~GePP~s~~hPmrvl  220 (467)
T KOG0201|consen  147 SGDVKLADFGVAGQLTNTVKR-RKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITA-IELAKGEPPHSKLHPMRVL  220 (467)
T ss_pred             cCcEEEEecceeeeeechhhc-cccccccccccchhhhccccccchhhhhhhhHHH-HHHhcCCCCCcccCcceEE
Confidence            999999999999887654433 3678999999999999988999999999999999 9999999999887765543

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.97  E-value=9.1e-31  Score=189.35  Aligned_cols=141  Identities=22%  Similarity=0.349  Sum_probs=121.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..++||||+++++|...+..      ..+++.....++.|++.|+.|||   +.+++||||+|+||+++
T Consensus        65 ~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~------~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~  135 (324)
T cd05589          65 VNLFACFQTEDHVCFVMEYAAGGDLMMHIHT------DVFSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLD  135 (324)
T ss_pred             hceeeEEEcCCEEEEEEcCCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEEC
Confidence            4678899999999999999999999887743      35788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+|++|||++........ ......++..|+|||.+.+..++.++|+||||+++ |+|++|+.||.+.+
T Consensus       136 ~~~~~kL~Dfg~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il-~el~~G~~pf~~~~  205 (324)
T cd05589         136 TEGFVKIADFGLCKEGMGFGD-RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLI-YEMLVGESPFPGDD  205 (324)
T ss_pred             CCCcEEeCcccCCccCCCCCC-cccccccCccccCHhHhcCCCCCcccchhhHHHHH-HHHHhCCCCCCCCC
Confidence            999999999998765332221 12234578899999999998999999999999999 99999999998765

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3.8e-31  Score=191.08  Aligned_cols=141  Identities=28%  Similarity=0.417  Sum_probs=125.1

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      .+--.|+....+|+|+..|+||+|.-++.+...   ..+++..+..++.+|++||.+||   ..+++.||+||+|||+|+
T Consensus       249 slaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~---~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd  322 (591)
T KOG0986|consen  249 SLAYAFETKDALCLVLTLMNGGDLKFHIYNHGN---PGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDD  322 (591)
T ss_pred             EEeeeecCCCceEEEEEeecCCceeEEeeccCC---CCCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeecc
Confidence            445567778899999999999999888876543   57899999999999999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      +++++|+|+|++..++..... .+ ..||..|||||++.+..|+...|+||+||++ |+|+.|+.||...
T Consensus       323 ~GhvRISDLGLAvei~~g~~~-~~-rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCll-Yemi~G~sPFr~~  389 (591)
T KOG0986|consen  323 HGHVRISDLGLAVEIPEGKPI-RG-RVGTVGYMAPEVLQNEVYDFSPDWFSLGCLL-YEMIAGHSPFRQR  389 (591)
T ss_pred             CCCeEeeccceEEecCCCCcc-cc-ccCcccccCHHHHcCCcccCCccHHHHHhHH-HHHHcccCchhhh
Confidence            999999999999888665432 22 3789999999999999999999999999999 9999999999754

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.97  E-value=1.1e-30  Score=197.58  Aligned_cols=147  Identities=21%  Similarity=0.294  Sum_probs=124.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++.|..++..++||||+++|+|.+.+..... ...++++..+..++.|++.|+.|+|   +++++||||||.||+++
T Consensus       128 v~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~  203 (478)
T PTZ00267        128 VKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLK-EHLPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLM  203 (478)
T ss_pred             eEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEEC
Confidence            5789999999999999999999999987754211 1145788888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..+|++|||++........ .......+++.|+|||.+.+..++.++|+|||||++ |+|++|+.||.+.+
T Consensus       204 ~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l-~el~tg~~Pf~~~~  275 (478)
T PTZ00267        204 PTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVIL-YELLTLHRPFKGPS  275 (478)
T ss_pred             CCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHH-HHHHhCCCCCCCCC
Confidence            999999999999876543221 122344578899999999988999999999999999 99999999997654

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.97  E-value=1.9e-31  Score=187.74  Aligned_cols=147  Identities=25%  Similarity=0.348  Sum_probs=121.0

Q ss_pred             CeEEEEEecCC---C--ceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC
Q 031436            1 MRLIGCCLETE---N--PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS   75 (159)
Q Consensus         1 v~l~~~~~~~~---~--~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~   75 (159)
                      |+|+-+|....   .  +.+||||++. +|.+.++.....+ ..++.-.++-+.+|+.+|+.|||   +.+++|||+||+
T Consensus        80 V~L~~~f~~~~~~d~~~lnlVleymP~-tL~~~~r~~~~~~-~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPq  154 (364)
T KOG0658|consen   80 VRLLYFFSSSTESDEVYLNLVLEYMPE-TLYRVIRHYTRAN-QRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKPQ  154 (364)
T ss_pred             eeEEEEEEecCCCchhHHHHHHHhchH-HHHHHHHHHhhcC-CCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCChh
Confidence            46666665422   2  3489999975 9999887532111 56777888899999999999999   899999999999


Q ss_pred             CEEecCC-CceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCCC
Q 031436           76 NILFQEQ-SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        76 nil~~~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      |+|+|.+ +.+|++|||+++.+..+...  ..+..+.+|+|||.+.+. .|+.+.|+||.||++ .||+.|++.|+|.+-
T Consensus       155 NlLvD~~tg~LKicDFGSAK~L~~~epn--iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~-aELl~g~plFpG~s~  231 (364)
T KOG0658|consen  155 NLLVDPDTGVLKICDFGSAKVLVKGEPN--ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVM-AELLKGQPLFPGDSS  231 (364)
T ss_pred             eEEEcCCCCeEEeccCCcceeeccCCCc--eeEEEeccccCHHHHcCccccCceeEEhhhhHHH-HHHhcCCcccCCCCH
Confidence            9999977 78999999999988665433  456789999999999876 599999999999999 999999999999765


Q ss_pred             cc
Q 031436          154 KP  155 (159)
Q Consensus       154 ~~  155 (159)
                      .+
T Consensus       232 ~d  233 (364)
T KOG0658|consen  232 VD  233 (364)
T ss_pred             HH
Confidence            44

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.97  E-value=1.8e-30  Score=182.38  Aligned_cols=146  Identities=22%  Similarity=0.324  Sum_probs=122.3

Q ss_pred             CeEEEEEecCC------CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCLETE------NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~~~------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      |++.+++.+.+      .+++|+||+. -+|.+.+......+ ..++...++.++.|++.|++|||   +++++||||||
T Consensus        74 v~L~dv~~~~~~~~~~~~l~lvfe~~d-~DL~~ymd~~~~~~-~g~~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKP  148 (323)
T KOG0594|consen   74 VRLHDVIHTSNNHRGIGKLYLVFEFLD-RDLKKYMDSLPKKP-QGLPPRLIKSFMRQLLRGLAFLH---SHGILHRDLKP  148 (323)
T ss_pred             EEEEeeeeecccccccceEEEEEEeec-ccHHHHHHhccccc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCc
Confidence            56788887766      7889999996 59999987654221 35666889999999999999999   99999999999


Q ss_pred             CCEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCCC
Q 031436           75 SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        75 ~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      +|+++++++.+|++|||+++...-+... .+....+..|+|||++.+. .|++..|+||+||++ .||+++++.|++...
T Consensus       149 QNlLi~~~G~lKlaDFGlAra~~ip~~~-yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIf-aEm~~~~~LFpG~se  226 (323)
T KOG0594|consen  149 QNLLISSSGVLKLADFGLARAFSIPMRT-YTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIF-AEMFTRRPLFPGDSE  226 (323)
T ss_pred             ceEEECCCCcEeeeccchHHHhcCCccc-ccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHH-HHHHhCCCCCCCCcH
Confidence            9999999999999999999866433221 2344678889999999987 689999999999999 999999999988643

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=5.1e-31  Score=188.05  Aligned_cols=138  Identities=28%  Similarity=0.409  Sum_probs=119.8

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++++++.+++..+++|||+++|+|.+.+...     ..+++.....++.|++.|+.|||   +++++|+||+|+||+++.
T Consensus        65 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~  136 (291)
T cd05612          65 RLFWTEHDQRFLYMLMEYVPGGELFSYLRNS-----GRFSNSTGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDK  136 (291)
T ss_pred             hhHhhhccCCeEEEEEeCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECC
Confidence            4566777888899999999999999988654     45788888899999999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ++.+|++|||++.......    ....++..|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       137 ~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il-~~l~~g~~pf~~~~  202 (291)
T cd05612         137 EGHIKLTDFGFAKKLRDRT----WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILI-YEMLVGYPPFFDDN  202 (291)
T ss_pred             CCCEEEEecCcchhccCCc----ccccCChhhcCHHHHcCCCCCchhhHHHHHHHH-HHHHhCCCCCCCCC
Confidence            9999999999887653322    123578889999999988899999999999999 99999999998754

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.97  E-value=1.9e-30  Score=187.28  Aligned_cols=142  Identities=24%  Similarity=0.372  Sum_probs=122.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++...+..+++|||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++|+||+|+||+++
T Consensus        59 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-----~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~  130 (318)
T cd05570          59 TQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRS-----GRFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLD  130 (318)
T ss_pred             cceeeEEEcCCEEEEEEcCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEEC
Confidence            46788898889999999999999999887653     35788999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.++++|||++........ ......++..|+|||.+.+..++.++|+|||||++ |+|++|+.||.+.+
T Consensus       131 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil-~~l~~G~~pf~~~~  200 (318)
T cd05570         131 SEGHIKIADFGMCKEGILGGV-TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLL-YEMLAGQSPFEGDD  200 (318)
T ss_pred             CCCcEEecccCCCeecCcCCC-cccceecCccccCHHHhcCCCCCcchhhhhHHHHH-HHHhhCCCCCCCCC
Confidence            999999999998764322221 11234578899999999999999999999999999 99999999997654

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.97  E-value=2.3e-31  Score=196.66  Aligned_cols=140  Identities=21%  Similarity=0.329  Sum_probs=126.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |.+++.|+...++|+|.||+.| +|...+...     +.++++.+..++.+++.|+.|||   +++++|||+||+||+++
T Consensus        64 v~m~esfEt~~~~~vVte~a~g-~L~~il~~d-----~~lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~  134 (808)
T KOG0597|consen   64 VEMLESFETSAHLWVVTEYAVG-DLFTILEQD-----GKLPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLE  134 (808)
T ss_pred             hhHHHhhcccceEEEEehhhhh-hHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeec
Confidence            4567788899999999999975 999988754     56999999999999999999999   99999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      +.+.+|++|||+++..+.+.. ......|++.|||||...+++|+..+|+||+||++ ||++.|++||-..
T Consensus       135 ~~~~~KlcdFg~Ar~m~~~t~-vltsikGtPlYmAPElv~e~pyd~~sDlWslGcil-YE~~~G~PPF~a~  203 (808)
T KOG0597|consen  135 KGGTLKLCDFGLARAMSTNTS-VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCIL-YELYVGQPPFYAR  203 (808)
T ss_pred             CCCceeechhhhhhhcccCce-eeeeccCcccccCHHHHcCCCccchhhHHHHHHHH-HHHhcCCCCchHH
Confidence            999999999999998876543 33456799999999999999999999999999999 9999999999654

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.96  E-value=4.3e-30  Score=186.67  Aligned_cols=149  Identities=23%  Similarity=0.402  Sum_probs=119.1

Q ss_pred             CeEEEEEecCC-CceEEEEecCCCChHHHhhCCCCC--------------------------------------------
Q 031436            1 MRLIGCCLETE-NPVLVFEYVEYGTLADRIYHPRQP--------------------------------------------   35 (159)
Q Consensus         1 v~l~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~--------------------------------------------   35 (159)
                      |+++++|...+ ..+++|||+++|+|.+.+...+..                                            
T Consensus        74 v~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (338)
T cd05102          74 VNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPST  153 (338)
T ss_pred             eeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCcccccccccc
Confidence            46788887644 578999999999999988643210                                            


Q ss_pred             -------------CCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecCCCcccCCCcce
Q 031436           36 -------------NFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR  102 (159)
Q Consensus        36 -------------~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~  102 (159)
                                   ...++++..+..++.|++.|+.|||   +++++||||||.||+++.+..++++|||++.........
T Consensus       154 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~  230 (338)
T cd05102         154 SGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY  230 (338)
T ss_pred             CcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcch
Confidence                         0134677788889999999999999   899999999999999999999999999988765332211


Q ss_pred             -eeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCC
Q 031436          103 -IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDW  153 (159)
Q Consensus       103 -~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~  153 (159)
                       ......++..|+|||.+.+..++.++|+||||+++ |+|++ |..||.+.+.
T Consensus       231 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il-~el~~~g~~pf~~~~~  282 (338)
T cd05102         231 VRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLL-WEIFSLGASPYPGVQI  282 (338)
T ss_pred             hcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHH-HHHHhCCCCCCCCCCc
Confidence             11223345779999999988899999999999999 99986 9999987543

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.96  E-value=3.1e-30  Score=183.05  Aligned_cols=146  Identities=19%  Similarity=0.355  Sum_probs=121.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++.+++..++..+++|||+++|+|.+.+..... ....+++..+..++.|++.|+.|||   +++++|+||+|.||+++
T Consensus        56 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~  131 (280)
T cd05608          56 VSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDE-ENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLD  131 (280)
T ss_pred             eeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEC
Confidence            3567788888899999999999999887754321 1145788999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||.+......... .....++..|+|||.+.+..++.++|+||||+++ |++++|+.||...+
T Consensus       132 ~~~~~~l~dfg~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il-~el~~g~~pf~~~~  201 (280)
T cd05608         132 NDGNVRISDLGLAVELKDGQSK-TKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTL-YEMIAARGPFRARG  201 (280)
T ss_pred             CCCCEEEeeCccceecCCCCcc-ccccCCCcCccCHHHhcCCCCCccccHHHHHHHH-HHHHhCCCCCCCCC
Confidence            9999999999988655432221 1223578889999999999999999999999999 99999999997643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.96  E-value=1.2e-30  Score=182.38  Aligned_cols=134  Identities=20%  Similarity=0.297  Sum_probs=118.3

Q ss_pred             CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEe
Q 031436           10 TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFD   89 (159)
Q Consensus        10 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d   89 (159)
                      -+..|+|||||++ +|.+++..-+    +++...+++.++.|++.|++|||   ++.++|||||+.|+|..+.+.+|++|
T Consensus       149 ~d~iy~VMe~~Eh-DLksl~d~m~----q~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaD  220 (419)
T KOG0663|consen  149 MDKIYIVMEYVEH-DLKSLMETMK----QPFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIAD  220 (419)
T ss_pred             cceeeeeHHHHHh-hHHHHHHhcc----CCCchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEecc
Confidence            3568999999987 9999997654    57889999999999999999999   99999999999999999999999999


Q ss_pred             cCCCcccCCCcceeeeeecccccccCccccccCC-CCCCcceEeccccccCcceecccccccCCC
Q 031436           90 FSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD-CNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      ||+++.+...... .+...-|..|+|||.+.+.+ |+++.|+||+||++ .|++++++.|+|...
T Consensus       221 FGLAR~ygsp~k~-~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~-aE~l~~kPlf~G~sE  283 (419)
T KOG0663|consen  221 FGLAREYGSPLKP-YTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIF-AELLTQKPLFPGKSE  283 (419)
T ss_pred             cchhhhhcCCccc-CcceEEEeeecCHHHhcCCcccCcchhhhhHHHHH-HHHHhcCCCCCCCch
Confidence            9999988765433 33456688999999999864 89999999999999 999999999998754

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.96  E-value=2.2e-30  Score=184.18  Aligned_cols=143  Identities=24%  Similarity=0.321  Sum_probs=118.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++..++..+++|||++++.+.... ...    ..+++..+..++.|++.|+.|||   +.+++|+||+|+||+++
T Consensus        63 v~~~~~~~~~~~~~lv~e~~~~~~l~~~~-~~~----~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~  134 (287)
T cd07848          63 VELKEAFRRRGKLYLVFEYVEKNMLELLE-EMP----NGVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLIS  134 (287)
T ss_pred             cchhhhEecCCEEEEEEecCCCCHHHHHH-hcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEc
Confidence            45677888888999999999876665443 221    45788888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..+|++|||++...............++..|+|||.+.+..++.++|+||+|+++ |+|++|+.||++.+
T Consensus       135 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil-~el~~g~~pf~~~~  205 (287)
T cd07848         135 HNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCIL-GELSDGQPLFPGES  205 (287)
T ss_pred             CCCcEEEeeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHH-HHHHhCCCCCCCCC
Confidence            999999999998876543322222234578889999999988899999999999999 99999999998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.96  E-value=2.4e-30  Score=175.89  Aligned_cols=143  Identities=20%  Similarity=0.238  Sum_probs=124.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |.++++|-+.+.+.+|+||++. +|+..++...    -.++..+++.++.+++.|+.|+|   ++.++|||+||.|+|++
T Consensus        64 i~LiD~F~~~~~l~lVfEfm~t-dLe~vIkd~~----i~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis  135 (318)
T KOG0659|consen   64 IELIDVFPHKSNLSLVFEFMPT-DLEVVIKDKN----IILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLIS  135 (318)
T ss_pred             hhhhhhccCCCceEEEEEeccc-cHHHHhcccc----cccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCccceEEc
Confidence            4578889999999999999975 9999997654    57889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.+|++|||+++.+......... ..-+..|+|||.+.|. .|+..+|+||.||++ .||+-|.+.|+|.+.
T Consensus       136 ~~g~lKiADFGLAr~f~~p~~~~~~-~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~-AELllr~P~fpG~sD  207 (318)
T KOG0659|consen  136 SDGQLKIADFGLARFFGSPNRIQTH-QVVTRWYRAPELLFGSRQYGTGVDMWAVGCIF-AELLLRVPFFPGDSD  207 (318)
T ss_pred             CCCcEEeecccchhccCCCCccccc-ceeeeeccChHHhccchhcCCcchhhhHHHHH-HHHHccCCCCCCCch
Confidence            9999999999999988765433222 2457889999999876 599999999999999 999999999998753

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.96  E-value=5.4e-31  Score=197.04  Aligned_cols=147  Identities=22%  Similarity=0.343  Sum_probs=128.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+|+|+|++...+|||.|||.+|+|.+.++++++   ..++.-..+.++.||..|+.||.   ++++|||||..+|+|++
T Consensus       326 VqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr---~ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVg  399 (1157)
T KOG4278|consen  326 VQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNR---SEVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVG  399 (1157)
T ss_pred             HHHhhhhccCCCeEEEEecccCccHHHHHHHhch---hhcchhHHHHHHHHHHHHHHHHH---Hhhhhhhhhhhhhcccc
Confidence            6899999999999999999999999999998765   44666667788999999999999   99999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCCc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDWK  154 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~~  154 (159)
                      .+..+|++|||+++.++.+.....--..-++.|+|||.+.++.++.|+|+|+||+++ ||+.| |..||++-|..
T Consensus       400 EnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLL-WEIATYGMsPYPGidlS  473 (1157)
T KOG4278|consen  400 ENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLL-WEIATYGMSPYPGIDLS  473 (1157)
T ss_pred             ccceEEeeccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHH-HHHHhcCCCCCCCccHH
Confidence            999999999999988776553322223347889999999999999999999999999 88887 89999987643

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=2.4e-30  Score=180.98  Aligned_cols=137  Identities=23%  Similarity=0.321  Sum_probs=122.6

Q ss_pred             EEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCce
Q 031436            6 CCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVA   85 (159)
Q Consensus         6 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~   85 (159)
                      .|+.+.++|+||||..||.|.-++.+.     ..++++....+..+|+.|+.|||   +++++.||+|.+|+++++++++
T Consensus       236 sFQt~drlCFVMeyanGGeLf~HLsre-----r~FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHI  307 (516)
T KOG0690|consen  236 SFQTQDRLCFVMEYANGGELFFHLSRE-----RVFSEDRTRFYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHI  307 (516)
T ss_pred             hhccCceEEEEEEEccCceEeeehhhh-----hcccchhhhhhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCce
Confidence            456678899999999999998888665     56888888999999999999999   8999999999999999999999


Q ss_pred             EEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           86 KLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        86 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      |+.|||+++.-..... ...+++|++.|+|||++....|...+|+|.+|+++ |||++|+.||-..+
T Consensus       308 KitDFGLCKE~I~~g~-t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVM-YEMmCGRLPFyn~d  372 (516)
T KOG0690|consen  308 KITDFGLCKEEIKYGD-TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVM-YEMMCGRLPFYNKD  372 (516)
T ss_pred             Eeeecccchhcccccc-eeccccCChhhcCchhhccccccceeehhhhhHHH-HHHHhccCcccccc
Confidence            9999999986554433 34568999999999999999999999999999999 99999999998765

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.96  E-value=3.2e-29  Score=177.49  Aligned_cols=140  Identities=21%  Similarity=0.316  Sum_probs=120.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |.+.++|.-.++.|+|+|.+ |.|+.++++.++   ..+++...+..++.|++.++++||   +.+++|.||||+|||+.
T Consensus       154 v~m~~wFdyrghiCivfell-G~S~~dFlk~N~---y~~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfv  226 (415)
T KOG0671|consen  154 VQMRDWFDYRGHICIVFELL-GLSTFDFLKENN---YIPFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFV  226 (415)
T ss_pred             EeeehhhhccCceEEEEecc-ChhHHHHhccCC---ccccchHHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEe
Confidence            34566788889999999999 779999998754   478999999999999999999999   99999999999999984


Q ss_pred             C--------------------CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCc
Q 031436           81 E--------------------QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSG  140 (159)
Q Consensus        81 ~--------------------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~  140 (159)
                      .                    +..++++|||.+.......    +....|..|+|||++.+.+++.++|+||+||++ .|
T Consensus       227 ss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL-~E  301 (415)
T KOG0671|consen  227 SSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCIL-VE  301 (415)
T ss_pred             ccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc----ceeeeccccCCchheeccCcCCccCceeeeeEE-EE
Confidence            2                    2247899999876543322    345678899999999999999999999999999 99


Q ss_pred             ceecccccccCC
Q 031436          141 HLTGRAWYRSED  152 (159)
Q Consensus       141 ~~~g~~p~~~~~  152 (159)
                      +.+|...|++.+
T Consensus       302 lytG~~LFqtHe  313 (415)
T KOG0671|consen  302 LYTGETLFQTHE  313 (415)
T ss_pred             eeccceecccCC
Confidence            999999999876

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.96  E-value=3.2e-30  Score=195.96  Aligned_cols=145  Identities=23%  Similarity=0.285  Sum_probs=123.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+|.|+.+...+.+|+.|||++|+|..+|+...    ..++.-+.+.+++.|+.|++||.   +.+.+||||..+|||++
T Consensus       693 IrLEGVVTks~PvMIiTEyMENGsLDsFLR~~D----GqftviQLVgMLrGIAsGMkYLs---dm~YVHRDLAARNILVN  765 (996)
T KOG0196|consen  693 IRLEGVVTKSKPVMIITEYMENGSLDSFLRQND----GQFTVIQLVGMLRGIASGMKYLS---DMNYVHRDLAARNILVN  765 (996)
T ss_pred             EEEEEEEecCceeEEEhhhhhCCcHHHHHhhcC----CceEeehHHHHHHHHHHHhHHHh---hcCchhhhhhhhheeec
Confidence            589999999999999999999999999998765    45888999999999999999999   99999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeee--cccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRV--MGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~--~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+-.+|++|||+++.+-.+.....++.  .-+..|+|||.+...+++.++|+||||+++|..|..|..||=.+.
T Consensus       766 snLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmS  839 (996)
T KOG0196|consen  766 SNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS  839 (996)
T ss_pred             cceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccc
Confidence            999999999999986644432211211  235789999999999999999999999999555666998885443

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.96  E-value=2.1e-29  Score=178.55  Aligned_cols=142  Identities=25%  Similarity=0.402  Sum_probs=120.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+.++...+++|||+++++|.+.+.....   ..+.+.....++.|++.|+.|||   +.+++|+||+|+||+++
T Consensus        56 ~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~---~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~  129 (277)
T cd05607          56 VNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGE---RGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLD  129 (277)
T ss_pred             EEEEEEEecCCeEEEEEecCCCCCHHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEc
Confidence            3567888888999999999999999888754322   34778888889999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .+..++++|||++........  .....++..|+|||.+.+..++.++|+||+|+++ |++++|+.||...
T Consensus       130 ~~~~~~l~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l-~el~~g~~p~~~~  197 (277)
T cd05607         130 DQGNCRLSDLGLAVELKDGKT--ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSI-YEMVAGRTPFKDH  197 (277)
T ss_pred             CCCCEEEeeceeeeecCCCce--eeccCCCCCccCHHHHccCCCCCchhHHHHHHHH-HHHHhCCCCCCCC
Confidence            999999999998776543322  1223577889999999888899999999999999 9999999999754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.96  E-value=1.3e-29  Score=178.52  Aligned_cols=144  Identities=18%  Similarity=0.210  Sum_probs=119.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++|++..++..+++|||+++|+|.+.+....    ..+++..+..++.|++.|+.|||   +++++|+|++|.||+++
T Consensus        69 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~  141 (266)
T cd05064          69 VRLEGVITRGNTMMIVTEYMSNGALDSFLRKHE----GQLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVN  141 (266)
T ss_pred             CeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEc
Confidence            578899999999999999999999999886532    45788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcce-ecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHL-TGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~-~g~~p~~~~~  152 (159)
                      .+..++++|||.+...............++..|+|||.+.+..++.++|+||||+++ |+++ +|..||...+
T Consensus       142 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~ell~~g~~p~~~~~  213 (266)
T cd05064         142 SDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVM-WEVMSYGERPYWDMS  213 (266)
T ss_pred             CCCcEEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHH-HHHhcCCCCCcCcCC
Confidence            999999999997654322211111112335679999999988999999999999999 8865 5999997654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.96  E-value=1.3e-29  Score=183.87  Aligned_cols=140  Identities=24%  Similarity=0.382  Sum_probs=121.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCC-CeEEecCCCCCEEe
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR-PIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~-~~~h~~l~~~nil~   79 (159)
                      |++++++..++..+++|||+++++|.+.+...     ..+++..+..++.|++.|+.|||   ++ +++|+||+|.||++
T Consensus        66 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~~ivH~dlkp~Nil~  137 (331)
T cd06649          66 VGFYGAFYSDGEISICMEHMDGGSLDQVLKEA-----KRIPEEILGKVSIAVLRGLAYLR---EKHQIMHRDVKPSNILV  137 (331)
T ss_pred             CeEEEEEEECCEEEEEeecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHh---hcCCEEcCCCChhhEEE
Confidence            57889999999999999999999999988654     35778888899999999999999   65 69999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           80 QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +.++.++++|||++.......   .....++..|+|||.+.+..++.++|+||||+++ |++++|+.||...+
T Consensus       138 ~~~~~~kl~Dfg~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il-~el~tg~~p~~~~~  206 (331)
T cd06649         138 NSRGEIKLCDFGVSGQLIDSM---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL-VELAIGRYPIPPPD  206 (331)
T ss_pred             cCCCcEEEccCcccccccccc---cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHH-HHHHhCCCCCCCCC
Confidence            999999999999876553322   1234578899999999988999999999999999 99999999997543

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>PHA02988 hypothetical protein; Provisional

Probab=99.96  E-value=1.1e-29  Score=180.62  Aligned_cols=139  Identities=15%  Similarity=0.263  Sum_probs=117.7

Q ss_pred             CeEEEEEec----CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCC-CCeEEecCCCC
Q 031436            1 MRLIGCCLE----TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS-RPIVFRNVKPS   75 (159)
Q Consensus         1 v~l~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~-~~~~h~~l~~~   75 (159)
                      |+++|++.+    ....+++|||+++|+|.+.+...     +.+++.....++.|++.|+.++|   + .+++||||+|.
T Consensus        81 v~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~Hrdlkp~  152 (283)
T PHA02988         81 LKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKE-----KDLSFKTKLDMAIDCCKGLYNLY---KYTNKPYKNLTSV  152 (283)
T ss_pred             EEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhC-----CCCChhHHHHHHHHHHHHHHHHH---hcCCCCCCcCChh
Confidence            578888876    34678999999999999998654     35778888899999999999999   5 48889999999


Q ss_pred             CEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc--CCCCCCcceEeccccccCcceecccccccCC
Q 031436           76 NILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT--GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        76 nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~--~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      |++++.++.+|++|||++........    ...++..|+|||.+.+  ..++.++|+||||+++ |++++|+.||.+.+
T Consensus       153 nill~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil-~el~~g~~Pf~~~~  226 (283)
T PHA02988        153 SFLVTENYKLKIICHGLEKILSSPPF----KNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVL-WEIFTGKIPFENLT  226 (283)
T ss_pred             hEEECCCCcEEEcccchHhhhccccc----cccCcccccCHHHhhhccccccchhhhhHHHHHH-HHHHHCCCCCCCCC
Confidence            99999999999999998775533221    2346778999999976  6789999999999999 99999999998764

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=2.2e-29  Score=179.10  Aligned_cols=143  Identities=26%  Similarity=0.385  Sum_probs=121.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++.+..++.++++|||+++|+|.+.+.....   ..+++..+..++.|++.|+.|||   +.+++|+||+|+||+++
T Consensus        63 v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~  136 (285)
T cd05605          63 VSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGN---PGFDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLD  136 (285)
T ss_pred             eeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEEC
Confidence            4567888888899999999999999988764321   45788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||++.........  ....++..|+|||.+.+..++.++|+||+|+++ |++++|+.||.+.+
T Consensus       137 ~~~~~~l~Dfg~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l-~el~~g~~pf~~~~  205 (285)
T cd05605         137 DYGHIRISDLGLAVEIPEGETI--RGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLI-YEMIEGKSPFRQRK  205 (285)
T ss_pred             CCCCEEEeeCCCceecCCCCcc--ccccCCCCccCcHHhcCCCCCccccchhHHHHH-HHHHHCCCCCCCCc
Confidence            9999999999987665332211  123578889999999888899999999999999 99999999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=1.2e-29  Score=189.95  Aligned_cols=142  Identities=23%  Similarity=0.370  Sum_probs=123.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+|+-.|.+...+|+||+|++||++.++|.+.     +.++++....++.++.++++..|   +.|+|||||||+|||+|
T Consensus       692 VrLyySFQDkdnLYFVMdYIPGGDmMSLLIrm-----gIFeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILID  763 (1034)
T KOG0608|consen  692 VRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRM-----GIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILID  763 (1034)
T ss_pred             EEEEEEeccCCceEEEEeccCCccHHHHHHHh-----ccCHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEc
Confidence            78999999999999999999999999998765     57889999999999999999999   99999999999999999


Q ss_pred             CCCceEEEecCCCcccC---------CC-----------------cc---------------eeeeeecccccccCcccc
Q 031436           81 EQSVAKLFDFSYSESIP---------EG-----------------ET---------------RIRGRVMGTFGYLPPEYI  119 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~---------~~-----------------~~---------------~~~~~~~~~~~~~ape~~  119 (159)
                      .++++||.|||++..+.         +.                 ..               .....+.|+..|+|||++
T Consensus       764 rdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl  843 (1034)
T KOG0608|consen  764 RDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVL  843 (1034)
T ss_pred             cCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHh
Confidence            99999999999853210         00                 00               001234578889999999


Q ss_pred             ccCCCCCCcceEeccccccCcceecccccccC
Q 031436          120 ATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus       120 ~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      ....++..+|+||.||++ |||+.|+.||...
T Consensus       844 ~r~g~~q~cdwws~gvil-~em~~g~~pf~~~  874 (1034)
T KOG0608|consen  844 ARTGYTQLCDWWSVGVIL-YEMLVGQPPFLAD  874 (1034)
T ss_pred             cccCccccchhhHhhHHH-HHHhhCCCCccCC
Confidence            999999999999999999 9999999999654

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.96  E-value=1.7e-29  Score=186.04  Aligned_cols=149  Identities=22%  Similarity=0.375  Sum_probs=121.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCC----------------------------------------------
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ----------------------------------------------   34 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~----------------------------------------------   34 (159)
                      |++++.|.+++..+++|||+++|+|.+++.....                                              
T Consensus       105 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (374)
T cd05106         105 VNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEM  184 (374)
T ss_pred             eeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhccccccccccccccccccccc
Confidence            5788999999999999999999999998754210                                              


Q ss_pred             -------------------CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecCCCcc
Q 031436           35 -------------------PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES   95 (159)
Q Consensus        35 -------------------~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~~   95 (159)
                                         ....++++..+..++.|++.|+.|||   +++++||||||.||+++.+..++++|||++..
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~  261 (374)
T cd05106         185 RPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARD  261 (374)
T ss_pred             CCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeee
Confidence                               01124677788899999999999999   89999999999999999999999999998876


Q ss_pred             cCCCcce-eeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCC
Q 031436           96 IPEGETR-IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDW  153 (159)
Q Consensus        96 ~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~  153 (159)
                      ....... ......++..|+|||.+....++.++|+||||+++ |+|++ |+.||+....
T Consensus       262 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil-~ellt~G~~Pf~~~~~  320 (374)
T cd05106         262 IMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL-WEIFSLGKSPYPGILV  320 (374)
T ss_pred             ccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHH-HHHHhCCCCCCccccc
Confidence            5433221 11122345679999999888899999999999999 99986 9999977543

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.96  E-value=2.7e-29  Score=178.76  Aligned_cols=142  Identities=23%  Similarity=0.354  Sum_probs=118.0

Q ss_pred             CeEEEEEe-----cCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC
Q 031436            1 MRLIGCCL-----ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS   75 (159)
Q Consensus         1 v~l~~~~~-----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~   75 (159)
                      |+++++|.     ....+++++||+. ++|.+.+.....   ..+++..+..++.|++.|+.|||   +++++|+||||+
T Consensus        67 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~  139 (290)
T cd07862          67 VRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPE---PGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQ  139 (290)
T ss_pred             ceEEEEEecccCCCCCcEEEEEccCC-CCHHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHH
Confidence            46777775     2456889999996 699888865432   45788899999999999999999   899999999999


Q ss_pred             CEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           76 NILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        76 nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ||+++.+..++++|||++.......  ......++..|+|||.+.+..++.++|+||||+++ |+|++|++||.+.+
T Consensus       140 Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il-~el~~g~~~f~~~~  213 (290)
T cd07862         140 NILVTSSGQIKLADFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIF-AEMFRRKPLFRGSS  213 (290)
T ss_pred             HEEEcCCCCEEEccccceEeccCCc--ccccccccccccChHHHhCCCCCCccchHHHHHHH-HHHHcCCCCcCCCC
Confidence            9999999999999999886553321  12234578889999999888899999999999999 99999999998653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.96  E-value=9.8e-31  Score=181.45  Aligned_cols=147  Identities=24%  Similarity=0.386  Sum_probs=129.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+.+|.+.....+|+|||||-.|++.+.++..+    +++.+.++..++...+.||+|||   ...-+|||+|.-|||+.
T Consensus        91 VKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~----K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLN  163 (502)
T KOG0574|consen   91 VKYYGSYFKHSDLWIVMEYCGAGSISDIMRARR----KPLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLN  163 (502)
T ss_pred             hhhhhhhccCCceEeehhhcCCCcHHHHHHHhc----CCccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEc
Confidence            567888888999999999999899999886544    78999999999999999999999   77789999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCCccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWKPA  156 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~~~  156 (159)
                      .++..|++|||.+..++.-- .+..+..|+++|||||++..-.|+.++|+||+|++. .||..|++||..-...+.
T Consensus       164 T~G~AKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITa-IEMAEG~PPYsDIHPMRA  237 (502)
T KOG0574|consen  164 TDGIAKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITA-IEMAEGRPPYSDIHPMRA  237 (502)
T ss_pred             ccchhhhhhccccchhhhhH-HhhCccccCcccccHHHHHHhccchhhhHhhhcchh-hhhhcCCCCcccccccce
Confidence            99999999999988775432 233456799999999999999999999999999999 999999999987655544

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.96  E-value=5.4e-29  Score=175.06  Aligned_cols=146  Identities=23%  Similarity=0.354  Sum_probs=121.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      ++++++|.+++.++++|||+++++|.+.+.....   ..+++..+..++.|++.++.+||   +++++|+|++|.||+++
T Consensus        65 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~  138 (263)
T cd05052          65 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR---QEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVG  138 (263)
T ss_pred             hheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEc
Confidence            4678899989999999999999999998865432   45788888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~  153 (159)
                      .+..++++|||.+................+..|+|||.+.+..++.++|+||||+++ |+|++ |..||++.+.
T Consensus       139 ~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il-~el~t~g~~p~~~~~~  211 (263)
T cd05052         139 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL-WEIATYGMSPYPGIDL  211 (263)
T ss_pred             CCCcEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHH-HHHHcCCCCCCCCCCH
Confidence            999999999998876544322211112234579999999888999999999999999 99998 9999977543

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.96  E-value=1.4e-29  Score=174.92  Aligned_cols=143  Identities=25%  Similarity=0.349  Sum_probs=119.0

Q ss_pred             CeEEEEEec----CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCC
Q 031436            1 MRLIGCCLE----TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSN   76 (159)
Q Consensus         1 v~l~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~n   76 (159)
                      |.+++++..    ..-+.+|||+|+||.|.+++...+.   ..+++.+...++.||+.|+.|||   +.+|.|||+||+|
T Consensus       118 V~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~---~afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKpEN  191 (400)
T KOG0604|consen  118 VSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGD---QAFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKPEN  191 (400)
T ss_pred             EEeehhhhhhccCceeeEeeeecccchHHHHHHHHccc---ccchHHHHHHHHHHHHHHHHHHH---hcchhhccCChhh
Confidence            345555543    2345689999999999999987654   67999999999999999999999   8999999999999


Q ss_pred             EEecC---CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           77 ILFQE---QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        77 il~~~---~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +|...   +..+|++|||+++....+...  .+...+++|.|||++-..+|+..+|+||+||++ |.|++|.+||-+..
T Consensus       192 LLyt~t~~na~lKLtDfGFAK~t~~~~~L--~TPc~TPyYvaPevlg~eKydkscdmwSlgVim-YIlLCGyPPFYS~h  267 (400)
T KOG0604|consen  192 LLYTTTSPNAPLKLTDFGFAKETQEPGDL--MTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIM-YILLCGYPPFYSNH  267 (400)
T ss_pred             eeeecCCCCcceEecccccccccCCCccc--cCCcccccccCHHHhCchhcCCCCCccchhHHH-HHhhcCCCcccccC
Confidence            99963   457899999999876543322  234578999999999888899999999999999 99999999997653

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.96  E-value=6.1e-29  Score=176.90  Aligned_cols=142  Identities=25%  Similarity=0.395  Sum_probs=120.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+.+++..+++|||+++++|.+.+.....   ..++......++.|++.|+.|+|   +.+++|+|++|+||+++
T Consensus        63 ~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~---~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~  136 (285)
T cd05630          63 VSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGE---AGFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKPENILLD  136 (285)
T ss_pred             eeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEEC
Confidence            3567788888899999999999999988854322   45788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .+..++++|||++.........  ....++..|+|||.+.+..++.++|+||+|+++ |+|++|+.||...
T Consensus       137 ~~~~~~l~Dfg~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l-~~l~~g~~Pf~~~  204 (285)
T cd05630         137 DHGHIRISDLGLAVHVPEGQTI--KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLL-YEMIAGQSPFQQR  204 (285)
T ss_pred             CCCCEEEeeccceeecCCCccc--cCCCCCccccChHHHcCCCCCCccccHHHHHHH-HHHHhCCCCCCCC
Confidence            9999999999987654332211  123578889999999988899999999999999 9999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.96  E-value=1e-28  Score=173.32  Aligned_cols=145  Identities=25%  Similarity=0.362  Sum_probs=120.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..++++||+++++|.+.+.....   ..++...+..++.|++.++.|||   +.+++|+|++|.||+++
T Consensus        64 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~  137 (261)
T cd05072          64 VRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEG---GKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVS  137 (261)
T ss_pred             eeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEec
Confidence            4677888888999999999999999998865422   45677888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..++++|||.+...............++..|+|||...+..++.++|+||||+++ |++++ |+.||...+
T Consensus       138 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~~l~t~g~~p~~~~~  209 (261)
T cd05072         138 ESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL-YEIVTYGKIPYPGMS  209 (261)
T ss_pred             CCCcEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHH-HHHHccCCCCCCCCC
Confidence            999999999999876543322111222345679999999888899999999999999 99998 999997643

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.96  E-value=4.9e-29  Score=180.98  Aligned_cols=140  Identities=24%  Similarity=0.369  Sum_probs=120.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCC-CCeEEecCCCCCEEe
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS-RPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~-~~~~h~~l~~~nil~   79 (159)
                      |+++++|.+++..+++|||+++++|.+.+...     ..++...+..++.|++.++.|||   + .+++|+||+|+||++
T Consensus        66 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~l~~~l~~lH---~~~~ivH~dlkp~Nili  137 (333)
T cd06650          66 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILV  137 (333)
T ss_pred             cceeEEEEECCEEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChhhEEE
Confidence            56889999999999999999999999988653     34678888899999999999999   5 479999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           80 QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +.++.+|++|||++.......   .....++..|+|||.+.+..++.++|+|||||++ |++++|+.||...+
T Consensus       138 ~~~~~~kL~Dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il-~~l~~g~~p~~~~~  206 (333)
T cd06650         138 NSRGEIKLCDFGVSGQLIDSM---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL-VEMAIGRYPIPPPD  206 (333)
T ss_pred             cCCCCEEEeeCCcchhhhhhc---cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHH-HHHHHCCCCCCCcc
Confidence            999999999999876543221   1223578889999999988899999999999999 99999999997543

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.96  E-value=4.3e-29  Score=178.99  Aligned_cols=141  Identities=21%  Similarity=0.302  Sum_probs=116.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.++...+++|||+. ++|.+.+....    ..++...+..++.|++.|+.|||   +.+++||||||+||+++
T Consensus        66 v~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~  137 (303)
T cd07869          66 VLLHDIIHTKETLTLVFEYVH-TDLCQYMDKHP----GGLHPENVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLIS  137 (303)
T ss_pred             CeEEEEEecCCeEEEEEECCC-cCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEC
Confidence            467889998899999999995 68888776432    45778888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .++.+|++|||++......... .....++..|+|||.+.+. .++.++|+||+|+++ |+|++|+.||.+.
T Consensus       138 ~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il-~~l~~g~~pf~~~  207 (303)
T cd07869         138 DTGELKLADFGLARAKSVPSHT-YSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIF-VEMIQGVAAFPGM  207 (303)
T ss_pred             CCCCEEECCCCcceeccCCCcc-CCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHH-HHHHhCCCCCCCC
Confidence            9999999999987654322211 1223467889999998654 578899999999999 9999999999764

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.96  E-value=5.5e-29  Score=180.65  Aligned_cols=141  Identities=25%  Similarity=0.428  Sum_probs=115.3

Q ss_pred             CeEEEEEec--CCCceEEEEecCCCChHHHhhCCCCCCCCc-cchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCE
Q 031436            1 MRLIGCCLE--TENPVLVFEYVEYGTLADRIYHPRQPNFEP-VTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNI   77 (159)
Q Consensus         1 v~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~ni   77 (159)
                      |+|+.+..+  ..++|+|+|||+.|.+...-..      ++ +.+.+...++.+++.||.|||   .++++||||||.|+
T Consensus       171 V~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d------~~els~~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKPsNL  241 (576)
T KOG0585|consen  171 VKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPD------KPELSEQQARKYLRDVVLGLEYLH---YQGIIHRDIKPSNL  241 (576)
T ss_pred             eEEEEeecCcccCceEEEEEeccCCccccCCCC------cccccHHHHHHHHHHHHHHHHHHH---hcCeeccccchhhe
Confidence            678888876  4578999999998888532211      34 889999999999999999999   89999999999999


Q ss_pred             EecCCCceEEEecCCCcccCCCc----ceeeeeecccccccCccccccC---C-CCCCcceEeccccccCcceecccccc
Q 031436           78 LFQEQSVAKLFDFSYSESIPEGE----TRIRGRVMGTFGYLPPEYIATG---D-CNEKCDVYSFDGSRDSGHLTGRAWYR  149 (159)
Q Consensus        78 l~~~~~~~~l~d~~~~~~~~~~~----~~~~~~~~~~~~~~ape~~~~~---~-~~~~~DvwS~g~~~~~~~~~g~~p~~  149 (159)
                      |++.++++||+|||.+.......    .-......||+.++|||.+.+.   . .+.+.|+||+||++ ||++.|+.||-
T Consensus       242 Ll~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTL-YCllfG~~PF~  320 (576)
T KOG0585|consen  242 LLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTL-YCLLFGQLPFF  320 (576)
T ss_pred             EEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhH-HHhhhccCCcc
Confidence            99999999999999887652211    1111235789999999999763   2 36789999999999 99999999997


Q ss_pred             cC
Q 031436          150 SE  151 (159)
Q Consensus       150 ~~  151 (159)
                      +.
T Consensus       321 ~~  322 (576)
T KOG0585|consen  321 DD  322 (576)
T ss_pred             cc
Confidence            75

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=5.5e-29  Score=184.16  Aligned_cols=139  Identities=19%  Similarity=0.143  Sum_probs=117.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++..+...++++|++. ++|...+...     ..+++..++.++.|++.||.|+|   +.+++||||||.||+++
T Consensus       146 v~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~  216 (391)
T PHA03212        146 IQLKGTFTYNKFTCLILPRYK-TDLYCYLAAK-----RNIAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFIN  216 (391)
T ss_pred             CCEeEEEEECCeeEEEEecCC-CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEc
Confidence            578899998899999999995 6888887653     35778889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYR  149 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~  149 (159)
                      .++.++++|||++...............+++.|+|||.+.+..++.++|+||+|+++ |++++|+.||-
T Consensus       217 ~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil-~elltg~~p~~  284 (391)
T PHA03212        217 HPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVL-FEMATCHDSLF  284 (391)
T ss_pred             CCCCEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHH-HHHHHCCCCcC
Confidence            999999999998864332221122234678999999999988999999999999999 99999987653

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.95  E-value=1.1e-28  Score=180.56  Aligned_cols=142  Identities=27%  Similarity=0.336  Sum_probs=126.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |.+.++++.....++|||+++||.|.+.+...      .+++.....++.|++.+++|||   +.+++|||+||+|+++.
T Consensus        99 v~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~------~~sE~da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~  169 (382)
T KOG0032|consen   99 VQLKDAFEDPDSVYLVMELCEGGELFDRIVKK------HYSERDAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLA  169 (382)
T ss_pred             EEEEEEEEcCCeEEEEEEecCCchHHHHHHHc------cCCHHHHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeec
Confidence            57889999999999999999999999998754      2889999999999999999999   89999999999999996


Q ss_pred             CC----CceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCCc
Q 031436           81 EQ----SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWK  154 (159)
Q Consensus        81 ~~----~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~  154 (159)
                      ..    ..+|++|||++.....  ........|++.|+|||++....|+..+|+||+|+.+ |.|++|.+||.+++..
T Consensus       170 ~~~~~~~~ik~~DFGla~~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~-yiLL~G~~PF~~~~~~  244 (382)
T KOG0032|consen  170 SKDEGSGRIKLIDFGLAKFIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVIL-YILLSGVPPFWGETEF  244 (382)
T ss_pred             cccCCCCcEEEeeCCCceEccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHH-HHHhhCCCCCcCCChh
Confidence            43    3799999999988765  3333456899999999999999999999999999999 9999999999988754

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.95  E-value=3.7e-29  Score=178.20  Aligned_cols=142  Identities=21%  Similarity=0.327  Sum_probs=117.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+.+..+++|||+. ++|.+.+....    ..++...+..++.|++.|+.|||   +.+++||||||+||+++
T Consensus        66 v~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~  137 (288)
T cd07871          66 VTLHDIIHTERCLTLVFEYLD-SDLKQYLDNCG----NLMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLIN  137 (288)
T ss_pred             eeEEEEEcCCCeEEEEEeCCC-cCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEC
Confidence            467888888888999999996 59988876432    34678888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+|++|||++......... .....++..|+|||.+.+ ..++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       138 ~~~~~kl~DfG~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l-~~l~~g~~pf~~~~  208 (288)
T cd07871         138 EKGELKLADFGLARAKSVPTKT-YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCIL-YEMATGRPMFPGST  208 (288)
T ss_pred             CCCCEEECcCcceeeccCCCcc-ccCceecccccChHHhcCCcccCcHHHHHHHHHHH-HHHHhCCCCCCCCC
Confidence            9999999999987654322211 122346788999999875 4689999999999999 99999999997754

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.95  E-value=1e-28  Score=174.29  Aligned_cols=139  Identities=20%  Similarity=0.313  Sum_probs=121.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+..++..+++|||+++++|.+.+...     ..+++..+..++.|++.|+.++|   +.+++|+|++|.||+++
T Consensus        72 v~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~  143 (267)
T PHA03390         72 IKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKE-----GKLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLYD  143 (267)
T ss_pred             EEEEEEEecCCeeEEEEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEe
Confidence            46788998889999999999999999998654     36789999999999999999999   89999999999999999


Q ss_pred             CCC-ceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQS-VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~-~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+. .++++|||.+.......     ...++..|+|||.+.+..++.++|+||+|+++ +++++|+.||...+.
T Consensus       144 ~~~~~~~l~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il-~~l~~g~~p~~~~~~  211 (267)
T PHA03390        144 RAKDRIYLCDYGLCKIIGTPS-----CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLT-YELLTGKHPFKEDED  211 (267)
T ss_pred             CCCCeEEEecCccceecCCCc-----cCCCCCcccChhhhcCCCCCchhhHHHHHHHH-HHHHHCCCCCCCCCc
Confidence            887 89999999876553322     22467789999999888899999999999999 999999999986543

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.95  E-value=1.3e-29  Score=167.16  Aligned_cols=144  Identities=22%  Similarity=0.280  Sum_probs=118.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+|+|...+.+..|+.||.|. -||..+.+..- ......++..+..++..+..|+.|||+  +..++|||+||.|||++
T Consensus       108 V~FyGa~~regdvwIcME~M~-tSldkfy~~v~-~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn  183 (282)
T KOG0984|consen  108 VHFYGALFREGDVWICMELMD-TSLDKFYRKVL-KKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILIN  183 (282)
T ss_pred             EEeehhhhccccEEEeHHHhh-hhHHHHHHHHH-hcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEc
Confidence            678998888999999999996 47766554321 122678889999999999999999997  67899999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc----CCCCCCcceEeccccccCcceecccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT----GDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~----~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .++.+|++|||.+..+.++..+  +.-.|...|+|||.+..    ..|+.++|+||+|+++ .||.+++.||+..
T Consensus       184 ~~GqVKiCDFGIsG~L~dSiAk--t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItm-iElA~lr~PY~~w  255 (282)
T KOG0984|consen  184 YDGQVKICDFGISGYLVDSIAK--TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITM-IEMAILRFPYESW  255 (282)
T ss_pred             cCCcEEEcccccceeehhhhHH--HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhh-hhhhhcccccccc
Confidence            9999999999998766544332  22346778999998753    3689999999999999 9999999999864

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=4.4e-29  Score=183.43  Aligned_cols=142  Identities=25%  Similarity=0.377  Sum_probs=125.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      ||||.+...+.++|+|+|.-.+|+|.+++-...    ..+.++....|..||+.++.|+|   ..+++||||||+|+.+.
T Consensus        80 VRLYEViDTQTKlyLiLELGD~GDl~DyImKHe----~Gl~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFF  152 (864)
T KOG4717|consen   80 VRLYEVIDTQTKLYLILELGDGGDLFDYIMKHE----EGLNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFF  152 (864)
T ss_pred             eeeeehhcccceEEEEEEecCCchHHHHHHhhh----ccccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEe
Confidence            689999999999999999999999999987654    67889999999999999999999   89999999999999886


Q ss_pred             C-CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCC-CCcceEeccccccCcceecccccccCC
Q 031436           81 E-QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~-~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~-~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      . -+.+|+.|||++..+...  .+..+.+|+..|-|||++.+..|+ +++||||+|+++ |.+.+|++||+-.+
T Consensus       153 EKlGlVKLTDFGFSNkf~PG--~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVIL-yMLVCGq~PFqeAN  223 (864)
T KOG4717|consen  153 EKLGLVKLTDFGFSNKFQPG--KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVIL-YMLVCGQPPFQEAN  223 (864)
T ss_pred             eecCceEeeeccccccCCCc--chhhcccchhhccCchhhhcCccCCcchhhhHHHHHH-HHHHhCCCcccccc
Confidence            4 478999999998877443  233456799999999999999985 789999999999 99999999997654

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=5e-29  Score=188.37  Aligned_cols=142  Identities=27%  Similarity=0.375  Sum_probs=121.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCcc--chhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPV--TCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      |+.+|+|.+++.+-++||-.+||+|.++++...    +++  .+..+..+..||+.|++|||   ++.|+|||+|-+|+|
T Consensus       635 VrYLGs~senGf~kIFMEqVPGGSLSsLLrskW----GPlKDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVL  707 (1226)
T KOG4279|consen  635 VRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKW----GPLKDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVL  707 (1226)
T ss_pred             HHHhhccCCCCeEEEEeecCCCCcHHHHHHhcc----CCCccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEE
Confidence            456788989898889999999999999998654    344  67788899999999999999   999999999999999


Q ss_pred             ec-CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC--CCCCCcceEeccccccCcceecccccccC
Q 031436           79 FQ-EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG--DCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        79 ~~-~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~--~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      +. -.+.+|+.|||-++.+..- ...+.++.|+.-|||||++...  .|+.++|||||||++ .||.||++||--.
T Consensus       708 vNTySGvlKISDFGTsKRLAgi-nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~-vEMATGrPPF~El  781 (1226)
T KOG4279|consen  708 VNTYSGVLKISDFGTSKRLAGI-NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTM-VEMATGRPPFVEL  781 (1226)
T ss_pred             EeeccceEEecccccchhhccC-CccccccccchhhhChHhhccCCcCCCchhhhhhcccee-EeeccCCCCeeec
Confidence            96 4578999999988776432 2345678899999999999754  589999999999999 9999999999543

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.95  E-value=1.1e-28  Score=175.00  Aligned_cols=149  Identities=27%  Similarity=0.439  Sum_probs=121.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCC-----------CccchhhHHHHHHHHHHHHHHhhhcCCCCeEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNF-----------EPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVF   69 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~-----------~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h   69 (159)
                      +++++++.+.+..++++||+++++|.+.+........           ..++...+..++.|++.|+.|||   +++++|
T Consensus        71 ~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H  147 (283)
T cd05048          71 VCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHFVH  147 (283)
T ss_pred             ceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeec
Confidence            4678888888899999999999999998875422111           45677888899999999999999   899999


Q ss_pred             ecCCCCCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccc
Q 031436           70 RNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAW  147 (159)
Q Consensus        70 ~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p  147 (159)
                      +|++|.||+++++..++++|||++........ .......++..|+|||.+.+..++.++|+||||+++ |++++ |..|
T Consensus       148 ~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il-~el~~~g~~p  226 (283)
T cd05048         148 RDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVL-WEIFSYGLQP  226 (283)
T ss_pred             cccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHH-HHHHcCCCCC
Confidence            99999999999999999999998765432221 111223456779999999888899999999999999 99997 9999


Q ss_pred             cccCCC
Q 031436          148 YRSEDW  153 (159)
Q Consensus       148 ~~~~~~  153 (159)
                      |.+.+.
T Consensus       227 ~~~~~~  232 (283)
T cd05048         227 YYGFSN  232 (283)
T ss_pred             CCCCCH
Confidence            976543

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.95  E-value=1.4e-28  Score=172.22  Aligned_cols=144  Identities=21%  Similarity=0.375  Sum_probs=120.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      ++++++|..++..+++|||+++|+|.+.+....    ..+++..+..++.|++.++.|+|   +++++|+|++|.|++++
T Consensus        62 ~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~  134 (256)
T cd05114          62 VQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQ----GKLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVS  134 (256)
T ss_pred             eeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCc----cCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEc
Confidence            467889999999999999999999999886432    34778888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..++++|||.+...............++..|+|||.+.+..++.++|+||||+++ |++++ |+.||...+
T Consensus       135 ~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l-~el~~~g~~p~~~~~  206 (256)
T cd05114         135 STGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLM-WEVFTEGKMPFEKKS  206 (256)
T ss_pred             CCCeEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHH-HHHHcCCCCCCCCCC
Confidence            999999999998776543322211122345679999999888899999999999999 99999 899997654

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.95  E-value=1e-28  Score=177.08  Aligned_cols=148  Identities=27%  Similarity=0.432  Sum_probs=118.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCC--------------CCCCccchhhHHHHHHHHHHHHHHhhhcCCCC
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ--------------PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRP   66 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------------~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~   66 (159)
                      |++++++.+.+..+++|||+++|+|.+.+.....              .....+++.....++.|++.|+.|||   +.+
T Consensus        82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~  158 (304)
T cd05096          82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS---SLN  158 (304)
T ss_pred             eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH---HCC
Confidence            5788999998999999999999999998754311              01124567778899999999999999   899


Q ss_pred             eEEecCCCCCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee--
Q 031436           67 IVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT--  143 (159)
Q Consensus        67 ~~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~--  143 (159)
                      ++|+||||.||+++.+..+|++|||++........ .......++..|+|||.+.+..++.++|+||||+++ |+|++  
T Consensus       159 ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l-~el~~~~  237 (304)
T cd05096         159 FVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTL-WEILMLC  237 (304)
T ss_pred             ccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHH-HHHHHcc
Confidence            99999999999999999999999998875533221 112223346789999999888899999999999999 99876  


Q ss_pred             cccccccCC
Q 031436          144 GRAWYRSED  152 (159)
Q Consensus       144 g~~p~~~~~  152 (159)
                      +..||...+
T Consensus       238 ~~~p~~~~~  246 (304)
T cd05096         238 KEQPYGELT  246 (304)
T ss_pred             CCCCCCcCC
Confidence            567776543

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.95  E-value=3e-28  Score=170.48  Aligned_cols=146  Identities=21%  Similarity=0.330  Sum_probs=123.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+.+++.+++++||+++++|.+.+.....   ..++......++.|++.|+.++|   +++++|+|++|.||+++
T Consensus        61 ~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~  134 (255)
T cd08219          61 VAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRG---KLFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLT  134 (255)
T ss_pred             ceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEC
Confidence            4678889999999999999999999998865332   45788888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCCc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWK  154 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~  154 (159)
                      .+..++++|||.+......... .....++..|+|||.+.+..++.++|+||||+++ +++++|+.||...++.
T Consensus       135 ~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~-~~l~~g~~p~~~~~~~  206 (255)
T cd08219         135 QNGKVKLGDFGSARLLTSPGAY-ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCIL-YELCTLKHPFQANSWK  206 (255)
T ss_pred             CCCcEEEcccCcceeecccccc-cccccCCccccCHHHHccCCcCchhhhhhhchhh-eehhhccCCCCCCCHH
Confidence            9999999999987655432221 1234567889999999888899999999999999 9999999999877653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.95  E-value=6.3e-29  Score=180.31  Aligned_cols=141  Identities=20%  Similarity=0.305  Sum_probs=114.4

Q ss_pred             eEEEEEecC-----CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCC
Q 031436            2 RLIGCCLET-----ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSN   76 (159)
Q Consensus         2 ~l~~~~~~~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~n   76 (159)
                      ++++++...     ...+++|||+. ++|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+|
T Consensus        63 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~N  133 (338)
T cd07859          63 EIKHIMLPPSRREFKDIYVVFELME-SDLHQVIKAN-----DDLTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKN  133 (338)
T ss_pred             eecceEeccCCCCCceEEEEEecCC-CCHHHHHHhc-----ccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHH
Confidence            455666432     24799999995 6998888654     35788889999999999999999   8999999999999


Q ss_pred             EEecCCCceEEEecCCCcccCCCcce--eeeeecccccccCcccccc--CCCCCCcceEeccccccCcceecccccccCC
Q 031436           77 ILFQEQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEYIAT--GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        77 il~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~--~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      |+++.++.+|++|||++.........  ......++..|+|||.+.+  ..++.++|+||||+++ |+|++|+.||.+.+
T Consensus       134 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl-~el~tg~~pf~~~~  212 (338)
T cd07859         134 ILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIF-AEVLTGKPLFPGKN  212 (338)
T ss_pred             eEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHH-HHHHcCCCCCCCCC
Confidence            99999999999999988754322211  1123457888999999865  5789999999999999 99999999997754

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.95  E-value=2.6e-28  Score=175.04  Aligned_cols=146  Identities=23%  Similarity=0.310  Sum_probs=119.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCC-----------CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ-----------PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVF   69 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-----------~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h   69 (159)
                      |++++++.+++.+++++||+++++|.+++...+.           .....++...+..++.|++.|++|||   +++++|
T Consensus        71 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H  147 (303)
T cd05088          71 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIH  147 (303)
T ss_pred             ceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccc
Confidence            4688999999999999999999999998865421           11135788889999999999999999   899999


Q ss_pred             ecCCCCCEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-ccccc
Q 031436           70 RNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWY  148 (159)
Q Consensus        70 ~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~  148 (159)
                      +||+|.|++++.+..++++|||++........  ......+..|+|||...+..++.++|+||||+++ +++++ |..||
T Consensus       148 ~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~ellt~g~~p~  224 (303)
T cd05088         148 RDLAARNILVGENYVAKIADFGLSRGQEVYVK--KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL-WEIVSLGGTPY  224 (303)
T ss_pred             cccchheEEecCCCcEEeCccccCcccchhhh--cccCCCcccccCHHHHhccCCcccccchhhhhHH-HHHHhcCCCCc
Confidence            99999999999999999999998754321111  1112235579999999888899999999999999 99998 99999


Q ss_pred             ccCC
Q 031436          149 RSED  152 (159)
Q Consensus       149 ~~~~  152 (159)
                      .+.+
T Consensus       225 ~~~~  228 (303)
T cd05088         225 CGMT  228 (303)
T ss_pred             ccCC
Confidence            7654

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.95  E-value=1.6e-28  Score=180.92  Aligned_cols=148  Identities=21%  Similarity=0.370  Sum_probs=120.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCC---------------------------------------------
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQP---------------------------------------------   35 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~---------------------------------------------   35 (159)
                      |+++++|.+++..+++|||+++|+|.+++...+..                                             
T Consensus       102 v~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  181 (375)
T cd05104         102 VNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPT  181 (375)
T ss_pred             eeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccc
Confidence            57889999999999999999999999988643210                                             


Q ss_pred             -------------------------CCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEec
Q 031436           36 -------------------------NFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF   90 (159)
Q Consensus        36 -------------------------~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~   90 (159)
                                               ....+++..+..++.|++.|+.|||   +++++|+||||.||+++.+..+|++||
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Df  258 (375)
T cd05104         182 KADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDF  258 (375)
T ss_pred             ccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecC
Confidence                                     0124667788899999999999999   899999999999999999889999999


Q ss_pred             CCCcccCCCcce-eeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           91 SYSESIPEGETR-IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        91 ~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      |++......... ......++..|+|||.+.+..++.++|+||||+++ |++++ |..||....
T Consensus       259 G~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l-~ellt~g~~p~~~~~  321 (375)
T cd05104         259 GLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILL-WEIFSLGSSPYPGMP  321 (375)
T ss_pred             ccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHH-HHHHhcCCCCCCCCC
Confidence            988765433221 11122345679999999988999999999999999 99887 899997653

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.95  E-value=1.6e-28  Score=173.06  Aligned_cols=148  Identities=18%  Similarity=0.270  Sum_probs=117.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.|.+....+++|||+++|+|.+++...+.......++.....++.|++.|+.|+|   +++++|||+||.||+++
T Consensus        58 i~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~  134 (269)
T cd05042          58 LQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---QADFIHSDLALRNCQLT  134 (269)
T ss_pred             ceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH---hcCEecccccHhheEec
Confidence            578899999999999999999999999987654322233456777889999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcc-eeeeeecccccccCcccccc-------CCCCCCcceEeccccccCccee-cccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIAT-------GDCNEKCDVYSFDGSRDSGHLT-GRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~-------~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~  151 (159)
                      .+..+|++|||++........ .......++..|+|||....       ..++.++|+||+|+++ |++++ |..||...
T Consensus       135 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l-~el~~~~~~p~~~~  213 (269)
T cd05042         135 ADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTM-WELFTAADQPYPDL  213 (269)
T ss_pred             CCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHH-HHHHhCCCCCCCcC
Confidence            999999999998765432211 11112234567999998742       3468899999999999 99998 78898765


Q ss_pred             C
Q 031436          152 D  152 (159)
Q Consensus       152 ~  152 (159)
                      +
T Consensus       214 ~  214 (269)
T cd05042         214 S  214 (269)
T ss_pred             C
Confidence            3

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.95  E-value=2.8e-28  Score=173.57  Aligned_cols=148  Identities=28%  Similarity=0.420  Sum_probs=122.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCC--------CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecC
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ--------PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNV   72 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l   72 (159)
                      +++++++..++.+++++||+++++|.+++.....        .....+++..+..++.|++.++.|+|   +++++|||+
T Consensus        70 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~dl  146 (288)
T cd05093          70 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDL  146 (288)
T ss_pred             ceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccc
Confidence            4678899999999999999999999998864321        12245888899999999999999999   899999999


Q ss_pred             CCCCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-ccccccc
Q 031436           73 KPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRS  150 (159)
Q Consensus        73 ~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~  150 (159)
                      +|.||+++.+..++++|||.+........ .......++..|+|||.+.+..++.++|+||||+++ ++|++ |..||..
T Consensus       147 kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il-~~l~t~g~~p~~~  225 (288)
T cd05093         147 ATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVL-WEIFTYGKQPWYQ  225 (288)
T ss_pred             CcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHH-HHHHhCCCCCCCC
Confidence            99999999999999999998875543221 111222346679999999888899999999999999 99998 8999976


Q ss_pred             CC
Q 031436          151 ED  152 (159)
Q Consensus       151 ~~  152 (159)
                      .+
T Consensus       226 ~~  227 (288)
T cd05093         226 LS  227 (288)
T ss_pred             CC
Confidence            54

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.95  E-value=2.5e-28  Score=171.16  Aligned_cols=144  Identities=23%  Similarity=0.355  Sum_probs=120.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      ++++++|.+.+..+++|||+++|+|.+.+....    ..+++..+..++.|++.|+.|||   +.+++|+|++|.||+++
T Consensus        62 ~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~  134 (256)
T cd05113          62 VQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHG----KRFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVD  134 (256)
T ss_pred             eeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEc
Confidence            467899988889999999999999999886532    35788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..+|++|||.+...............++..|++||...+..++.++|+||||+++ |++++ |..||...+
T Consensus       135 ~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l-~~l~~~g~~p~~~~~  206 (256)
T cd05113         135 DQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLM-WEVYSLGKMPYERFN  206 (256)
T ss_pred             CCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHH-HHHhcCCCCCcCcCC
Confidence            999999999998775543322111112245679999999888899999999999999 99998 999987544

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.95  E-value=2.7e-28  Score=173.52  Aligned_cols=142  Identities=25%  Similarity=0.377  Sum_probs=120.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++.+.+..++..++++||+.+++|.+.+.....   ..+++..+..++.|++.++.|+|   +.+++|+|++|.|++++
T Consensus        63 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~  136 (285)
T cd05632          63 VNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGN---PGFEEERALFYAAEILCGLEDLH---RENTVYRDLKPENILLD  136 (285)
T ss_pred             eeEEEEEecCCEEEEEEEeccCccHHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEC
Confidence            3567788888899999999999999887764322   45889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .+..++++|||++.........  ....++..|+|||.+.+..++.++|+||+|+++ +++++|..||.+.
T Consensus       137 ~~~~~kl~Dfg~~~~~~~~~~~--~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l-~~l~~g~~P~~~~  204 (285)
T cd05632         137 DYGHIRISDLGLAVKIPEGESI--RGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLI-YEMIEGQSPFRGR  204 (285)
T ss_pred             CCCCEEEecCCcceecCCCCcc--cCCCCCcCccChHHhcCCCCCcccchHHHHHHH-HHHHhCCCCCCCC
Confidence            9999999999987654322211  123578899999999888899999999999999 9999999999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.95  E-value=2.4e-29  Score=168.75  Aligned_cols=141  Identities=25%  Similarity=0.428  Sum_probs=126.8

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      |++++|-+....|+++||.++|++...+...++   +++.+.....+..|++.|+.|+|   .++++|||+||+|+|++.
T Consensus        86 rlY~~fhd~~riyLilEya~~gel~k~L~~~~~---~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~  159 (281)
T KOG0580|consen   86 RLYGYFHDSKRIYLILEYAPRGELYKDLQEGRM---KRFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGS  159 (281)
T ss_pred             hhhhheeccceeEEEEEecCCchHHHHHHhccc---ccccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCC
Confidence            688999999999999999999999999986544   66888888899999999999999   999999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ++.+|++|||-+..-+   .....+.+||..|.+||+..+...+..+|+|++|++. ||++.|.+||.++.
T Consensus       160 ~~~lkiAdfGwsV~~p---~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~-yeflvg~ppFes~~  226 (281)
T KOG0580|consen  160 AGELKIADFGWSVHAP---SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLC-YEFLVGLPPFESQS  226 (281)
T ss_pred             CCCeeccCCCceeecC---CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHH-HHHHhcCCchhhhh
Confidence            9999999999765443   2234567899999999999999999999999999999 99999999999876

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=2.3e-28  Score=171.57  Aligned_cols=143  Identities=27%  Similarity=0.364  Sum_probs=120.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++..+..+++++||+++++|.+.+...     ..++......++.|++.|+.+||   +.+++|+|++|.||+++
T Consensus        67 ~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~  138 (263)
T cd06625          67 VQYYGCLRDDETLSIFMEYMPGGSVKDQLKAY-----GALTETVTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRD  138 (263)
T ss_pred             eeeEEEEccCCeEEEEEEECCCCcHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEc
Confidence            46789999889999999999999999988654     35778888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceee--eeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIR--GRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~--~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||.+...........  ....++..|+|||.+.+..++.++|+||+|+++ |++++|+.||...+
T Consensus       139 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~el~~g~~p~~~~~  211 (263)
T cd06625         139 SAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTV-VEMLTEKPPWAEFE  211 (263)
T ss_pred             CCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHH-HHHHhCCCCccccc
Confidence            999999999998765432211111  123456789999999998899999999999999 99999999997653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.95  E-value=4.6e-28  Score=172.70  Aligned_cols=147  Identities=27%  Similarity=0.397  Sum_probs=121.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCC-----------CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ-----------PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVF   69 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-----------~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h   69 (159)
                      +++++++..+...+++|||+++++|.+++.....           .....+++..+..++.|++.++.+||   +++++|
T Consensus        70 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H  146 (291)
T cd05094          70 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVH  146 (291)
T ss_pred             ceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeee
Confidence            4678899988999999999999999998865321           01134778889999999999999999   999999


Q ss_pred             ecCCCCCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccc
Q 031436           70 RNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAW  147 (159)
Q Consensus        70 ~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p  147 (159)
                      +||+|.||+++.+..++++|||++........ .......++..|+|||.+.+..++.++|+||||+++ |+|++ |+.|
T Consensus       147 ~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~el~t~g~~p  225 (291)
T cd05094         147 RDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVIL-WEIFTYGKQP  225 (291)
T ss_pred             cccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHH-HHHHhCCCCC
Confidence            99999999999999999999998865543221 111223356779999999988899999999999999 99998 9999


Q ss_pred             cccC
Q 031436          148 YRSE  151 (159)
Q Consensus       148 ~~~~  151 (159)
                      |...
T Consensus       226 ~~~~  229 (291)
T cd05094         226 WFQL  229 (291)
T ss_pred             CCCC
Confidence            8654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.95  E-value=1.1e-28  Score=187.32  Aligned_cols=136  Identities=21%  Similarity=0.300  Sum_probs=114.5

Q ss_pred             ceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecCC
Q 031436           13 PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY   92 (159)
Q Consensus        13 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~~   92 (159)
                      .+++|||+++|+|.+.+..... ....+++..+..++.|++.|+.|+|   +.+++||||||+||+++.+..+||+|||+
T Consensus       114 i~lV~Ey~~~gsL~~~l~~~~~-~~~~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl~~~~~vkL~DFGl  189 (496)
T PTZ00283        114 IALVLDYANAGDLRQEIKSRAK-TNRTFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILLCSNGLVKLGDFGF  189 (496)
T ss_pred             EEEEEeCCCCCcHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEeCCCCEEEEeccc
Confidence            5799999999999998865322 2256888889999999999999999   89999999999999999999999999999


Q ss_pred             CcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           93 SESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        93 ~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      ++....... .......++..|+|||.+.+..++.++|+||||+++ |+|++|+.||.+.+.
T Consensus       190 s~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvil-yeLltG~~Pf~~~~~  250 (496)
T PTZ00283        190 SKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLL-YELLTLKRPFDGENM  250 (496)
T ss_pred             CeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHH-HHHHHCCCCCCCCCH
Confidence            875543211 112234678899999999999999999999999999 999999999987654

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.95  E-value=9.5e-28  Score=171.06  Aligned_cols=148  Identities=24%  Similarity=0.340  Sum_probs=121.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCC-----------CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ-----------PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVF   69 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-----------~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h   69 (159)
                      +++++++.+++.++++|||+++|+|.+++.....           .....+++..+..++.|++.|+.|||   +.+++|
T Consensus        79 ~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH  155 (293)
T cd05053          79 INLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIH  155 (293)
T ss_pred             eeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCccc
Confidence            4688999999999999999999999998864310           12256788889999999999999999   899999


Q ss_pred             ecCCCCCEEecCCCceEEEecCCCcccCCCccee-eeeecccccccCccccccCCCCCCcceEeccccccCccee-cccc
Q 031436           70 RNVKPSNILFQEQSVAKLFDFSYSESIPEGETRI-RGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAW  147 (159)
Q Consensus        70 ~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p  147 (159)
                      +||+|.||+++.+..++++|||.+.......... .....++..|+|||.+.+..++.++|+||||+++ |++++ |..|
T Consensus       156 ~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~el~~~g~~p  234 (293)
T cd05053         156 RDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLL-WEIFTLGGSP  234 (293)
T ss_pred             cccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHH-HHHhcCCCCC
Confidence            9999999999999999999999887654322111 1112345679999999888899999999999999 99887 8999


Q ss_pred             cccCC
Q 031436          148 YRSED  152 (159)
Q Consensus       148 ~~~~~  152 (159)
                      |.+.+
T Consensus       235 ~~~~~  239 (293)
T cd05053         235 YPGIP  239 (293)
T ss_pred             CCCCC
Confidence            87654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.95  E-value=3.2e-28  Score=170.92  Aligned_cols=146  Identities=24%  Similarity=0.338  Sum_probs=121.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++..++..++++||+++++|.+.+....   ...+++..+..++.|++.|+.++|   +.+++|+|++|.||+++
T Consensus        64 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~  137 (261)
T cd05068          64 IQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGA---GRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVG  137 (261)
T ss_pred             cceeEEEecCCCeeeeeecccCCcHHHHHhccC---CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEc
Confidence            467888988999999999999999999986543   145788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~  153 (159)
                      .+..++++|||++................+..|+|||...+..++.++|+||||+++ +++++ |+.||.+.+.
T Consensus       138 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~el~t~g~~p~~~~~~  210 (261)
T cd05068         138 ENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILL-TEIVTYGRMPYPGMTN  210 (261)
T ss_pred             CCCCEEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHH-HHHHhcCCCCCCCCCH
Confidence            999999999998876543221111111224579999999888899999999999999 99998 9999987543

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.95  E-value=4.6e-28  Score=171.00  Aligned_cols=146  Identities=23%  Similarity=0.310  Sum_probs=119.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCC-----------CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ-----------PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVF   69 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-----------~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h   69 (159)
                      ++++++|..++..+++|||+++|+|.+++...+.           .....+++..+..++.|++.|+.|+|   +++++|
T Consensus        59 v~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H  135 (270)
T cd05047          59 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIH  135 (270)
T ss_pred             eeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEee
Confidence            4688999999999999999999999998865321           11134778889999999999999999   899999


Q ss_pred             ecCCCCCEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-ccccc
Q 031436           70 RNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWY  148 (159)
Q Consensus        70 ~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~  148 (159)
                      +|++|+|++++.+..++++|||++........  ......+..|+|||.+....++.++|+||||+++ +++++ |..||
T Consensus       136 ~dikp~nili~~~~~~kl~dfgl~~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il-~el~~~g~~pf  212 (270)
T cd05047         136 RDLAARNILVGENYVAKIADFGLSRGQEVYVK--KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL-WEIVSLGGTPY  212 (270)
T ss_pred             cccccceEEEcCCCeEEECCCCCccccchhhh--ccCCCCccccCChHHHccCCCCchhhHHHHHHHH-HHHHcCCCCCc
Confidence            99999999999999999999998753221111  1111234569999999888899999999999999 99996 99999


Q ss_pred             ccCC
Q 031436          149 RSED  152 (159)
Q Consensus       149 ~~~~  152 (159)
                      .+.+
T Consensus       213 ~~~~  216 (270)
T cd05047         213 CGMT  216 (270)
T ss_pred             cccC
Confidence            7654

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.95  E-value=3.9e-29  Score=185.68  Aligned_cols=141  Identities=23%  Similarity=0.397  Sum_probs=116.5

Q ss_pred             EEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCC
Q 031436            3 LIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQ   82 (159)
Q Consensus         3 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~   82 (159)
                      |-|+|..++. .||..+|+|.+|+.++...+    ..+.......++.|+++|+.|||   .++|||||||..||++..+
T Consensus       453 FMG~~~~p~~-AIiTqwCeGsSLY~hlHv~e----tkfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~  524 (678)
T KOG0193|consen  453 FMGACMNPPL-AIITQWCEGSSLYTHLHVQE----TKFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHED  524 (678)
T ss_pred             eehhhcCCce-eeeehhccCchhhhhccchh----hhhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccC
Confidence            5678877666 89999999999999997654    56788888899999999999999   9999999999999999999


Q ss_pred             CceEEEecCCCcccCCCc-ceeeeeecccccccCcccccc---CCCCCCcceEeccccccCcceecccccccCC
Q 031436           83 SVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYLPPEYIAT---GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        83 ~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~ape~~~~---~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ..+||+|||++..-..-. ......-.+...|||||++..   ++|+.++||||||+++ |||++|..||...+
T Consensus       525 ~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~-YELltg~lPysi~~  597 (678)
T KOG0193|consen  525 LKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVW-YELLTGELPYSIQN  597 (678)
T ss_pred             CcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHH-HHHHhCcCCcCCCC
Confidence            999999999864322211 111122346678999999964   4789999999999999 99999999999544

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.95  E-value=2e-29  Score=186.89  Aligned_cols=145  Identities=24%  Similarity=0.394  Sum_probs=125.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++.|+|..+.++++++||+++|+|.+++....-   ....-...++++.||+.|++||.   +.+++|||+.++|+|++
T Consensus       598 veLvGVC~~DePicmI~EYmEnGDLnqFl~ahea---pt~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~  671 (807)
T KOG1094|consen  598 VELLGVCVQDDPLCMITEYMENGDLNQFLSAHEL---PTAETAPGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVD  671 (807)
T ss_pred             eEEEeeeecCCchHHHHHHHhcCcHHHHHHhccC---cccccchhHHHHHHHHHHHHHHH---hhchhhccccccceeec
Confidence            6899999999999999999999999999976532   12344566789999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee--cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT--GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~--g~~p~~~~~  152 (159)
                      .+.++|++|||+++.+..... +.......++.|||+|.+...+++.++|+|+||+++ ||+++  ...||....
T Consensus       672 ~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTl-wE~~~~C~e~Py~~lt  745 (807)
T KOG1094|consen  672 GEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTL-WEVFMLCREQPYSQLT  745 (807)
T ss_pred             CcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHH-HHHHHHHhhCchhhhh
Confidence            999999999999987765543 334566778999999999999999999999999999 98876  578887654

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.95  E-value=5.3e-29  Score=186.13  Aligned_cols=145  Identities=22%  Similarity=0.311  Sum_probs=126.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+|+|+|.+ .+.|+|||.++.|.|..++...+    ..++......++.|++.++.|||   +..++|||+..+|||+.
T Consensus       454 ikLIGv~~e-~P~WivmEL~~~GELr~yLq~nk----~sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVs  525 (974)
T KOG4257|consen  454 IKLIGVCVE-QPMWIVMELAPLGELREYLQQNK----DSLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVS  525 (974)
T ss_pred             hheeeeeec-cceeEEEecccchhHHHHHHhcc----ccchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeec
Confidence            689999986 88999999999999999998654    45777888889999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      ...++|++|||+++.+....-...+....++.|||||.+....++.++|+|.||+++|..+..|..||.+..=
T Consensus       526 Sp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN  598 (974)
T KOG4257|consen  526 SPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN  598 (974)
T ss_pred             CcceeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc
Confidence            9999999999999988655444444555688999999999999999999999999995555669999988643

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.95  E-value=3.4e-28  Score=172.45  Aligned_cols=139  Identities=21%  Similarity=0.358  Sum_probs=118.3

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++++.+.++...++++||+++++|.+.+...     ..+++..+..++.|++.|+.|||   +.+++|+|++|+||+++.
T Consensus        61 ~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~-----~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~  132 (278)
T cd05606          61 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQH-----GVFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDE  132 (278)
T ss_pred             eeeeeeecCCEEEEEEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECC
Confidence            4667788888899999999999998887543     46889999999999999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCC
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +..++++|||++........   ....++..|+|||.+.+. .++.++|+||+|+++ +++++|+.||...+
T Consensus       133 ~~~~kl~dfg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l-~~l~~g~~p~~~~~  200 (278)
T cd05606         133 HGHVRISDLGLACDFSKKKP---HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCML-FKLLRGHSPFRQHK  200 (278)
T ss_pred             CCCEEEccCcCccccCccCC---cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHH-HHHHhCCCCCCCCC
Confidence            99999999998765533221   123578889999998744 689999999999999 99999999997653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.95  E-value=6.3e-28  Score=169.31  Aligned_cols=142  Identities=23%  Similarity=0.418  Sum_probs=116.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++++|. ....+++|||+++++|.+.+...+    ..+++..+..++.|++.++.++|   +++++|+||+|.||+++
T Consensus        58 i~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~  129 (257)
T cd05115          58 VRMIGVCE-AEALMLVMEMASGGPLNKFLSGKK----DEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLV  129 (257)
T ss_pred             EEEEEEEc-CCCeEEEEEeCCCCCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEc
Confidence            46778775 457899999999999999886432    45788999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceee--eeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIR--GRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~--~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~  151 (159)
                      .+..++++|||.+...........  ....++..|+|||.+.+..++.++|+||||+++ |++++ |..||...
T Consensus       130 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~el~~~g~~p~~~~  202 (257)
T cd05115         130 NQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITM-WEAFSYGQKPYKKM  202 (257)
T ss_pred             CCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHH-HHHhcCCCCCcCcC
Confidence            999999999998875543322111  111224679999999888899999999999999 99886 99999754

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.95  E-value=2.9e-29  Score=171.93  Aligned_cols=137  Identities=27%  Similarity=0.405  Sum_probs=120.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++.++++.+...++|+|.|+.|.|.|.+.+.     -.+++.....++.|+..|+.|||   .+.++||||||+|||++
T Consensus        86 I~l~D~yes~sF~FlVFdl~prGELFDyLts~-----VtlSEK~tR~iMrqlfegVeylH---a~~IVHRDLKpENILld  157 (411)
T KOG0599|consen   86 IDLQDVYESDAFVFLVFDLMPRGELFDYLTSK-----VTLSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLD  157 (411)
T ss_pred             EEeeeeccCcchhhhhhhhcccchHHHHhhhh-----eeecHHHHHHHHHHHHHHHHHHH---HhhhhhcccChhheeec
Confidence            46788899999999999999999999999765     45788888999999999999999   99999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc------CCCCCCcceEeccccccCcceeccccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT------GDCNEKCDVYSFDGSRDSGHLTGRAWY  148 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~------~~~~~~~DvwS~g~~~~~~~~~g~~p~  148 (159)
                      ++.++++.|||++..+.....  ....+|++.|+|||.+..      ..|+..+|.|+.|+++ |.++.|.+||
T Consensus       158 dn~~i~isDFGFa~~l~~Gek--LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVIm-yTLLaGcpPF  228 (411)
T KOG0599|consen  158 DNMNIKISDFGFACQLEPGEK--LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIM-YTLLAGCPPF  228 (411)
T ss_pred             cccceEEeccceeeccCCchh--HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHH-HHHHcCCCch
Confidence            999999999999988755432  223579999999999853      3588899999999999 9999999997

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=3.3e-29  Score=187.90  Aligned_cols=148  Identities=17%  Similarity=0.221  Sum_probs=127.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+|++.|+..+.+|+..|||.||.+...+-...    ..++++++.-+++|++.+|.|||   ++.+||||||.-|||+.
T Consensus        92 vkLl~ayy~enkLwiliEFC~GGAVDaimlEL~----r~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~T  164 (1187)
T KOG0579|consen   92 VKLLSAYYFENKLWILIEFCGGGAVDAIMLELG----RVLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLT  164 (1187)
T ss_pred             HHHHHHHhccCceEEEEeecCCchHhHHHHHhc----cccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEE
Confidence            456778888899999999999999988776654    57899999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCcccc-----ccCCCCCCcceEeccccccCcceecccccccCCCcc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI-----ATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWKP  155 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~-----~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~~  155 (159)
                      .++.++++|||.+.....-. .....+.|+++|||||+.     ...+|+.++||||||+++ .+|.-+.+|....+..+
T Consensus       165 ldGdirLADFGVSAKn~~t~-qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITL-IEMAqiEPPHhelnpMR  242 (1187)
T KOG0579|consen  165 LDGDIRLADFGVSAKNKSTR-QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITL-IEMAQIEPPHHELNPMR  242 (1187)
T ss_pred             ecCcEeeecccccccchhHH-hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHH-HHHhccCCCccccchHH
Confidence            99999999999887654322 334568899999999986     456899999999999999 99999999998776655


Q ss_pred             cc
Q 031436          156 AV  157 (159)
Q Consensus       156 ~~  157 (159)
                      .+
T Consensus       243 Vl  244 (1187)
T KOG0579|consen  243 VL  244 (1187)
T ss_pred             HH
Confidence            43

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.95  E-value=2.7e-28  Score=173.08  Aligned_cols=139  Identities=20%  Similarity=0.339  Sum_probs=117.5

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      .+++.+..++..+++|||+++++|.+.+...     ..+++..+..++.|++.|+.|+|   +.+++|+|++|+||+++.
T Consensus        61 ~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~-----~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~  132 (279)
T cd05633          61 CMTYAFHTPDKLCFILDLMNGGDLHYHLSQH-----GVFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDE  132 (279)
T ss_pred             EEEEEEecCCeEEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECC
Confidence            4567777788899999999999999888653     45888999999999999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccc-cCCCCCCcceEeccccccCcceecccccccCC
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA-TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~-~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +..++++|||++........   ....++..|+|||.+. +..++.++|+||+|+++ +++++|+.||...+
T Consensus       133 ~~~~~l~dfg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l-~~l~~g~~pf~~~~  200 (279)
T cd05633         133 HGHVRISDLGLACDFSKKKP---HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCML-FKLLRGHSPFRQHK  200 (279)
T ss_pred             CCCEEEccCCcceeccccCc---cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHH-HHHHhCCCCcCCCC
Confidence            99999999998765432221   1234788899999886 45689999999999999 99999999997643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>PTZ00284 protein kinase; Provisional

Probab=99.95  E-value=1.9e-28  Score=185.00  Aligned_cols=137  Identities=19%  Similarity=0.267  Sum_probs=112.5

Q ss_pred             eEEEEEec-CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCC-CCeEEecCCCCCEEe
Q 031436            2 RLIGCCLE-TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS-RPIVFRNVKPSNILF   79 (159)
Q Consensus         2 ~l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~-~~~~h~~l~~~nil~   79 (159)
                      ++++++.. ....|++||++ +++|.+.+...     ..+++..+..++.|++.||.|||   + .+++||||||+||++
T Consensus       195 ~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~yLH---~~~gIiHrDlKP~NILl  265 (467)
T PTZ00284        195 KIQRYFQNETGHMCIVMPKY-GPCLLDWIMKH-----GPFSHRHLAQIIFQTGVALDYFH---TELHLMHTDLKPENILM  265 (467)
T ss_pred             eeEEEEEcCCceEEEEEecc-CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hcCCeecCCCCHHHEEE
Confidence            45566654 35688999998 77998888653     35788889999999999999999   6 599999999999999


Q ss_pred             cCCC----------------ceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee
Q 031436           80 QEQS----------------VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT  143 (159)
Q Consensus        80 ~~~~----------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~  143 (159)
                      +...                .+||+|||.+......    .....++..|+|||++.+..++.++|+|||||++ |+|++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~----~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil-~ellt  340 (467)
T PTZ00284        266 ETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHS----RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCII-YELYT  340 (467)
T ss_pred             ecCCcccccccccccCCCCceEEECCCCccccCccc----cccccCCccccCcHHhhcCCCCcHHHHHHHHHHH-HHHHh
Confidence            7654                4899999976533221    1234678899999999999999999999999999 99999


Q ss_pred             cccccccCC
Q 031436          144 GRAWYRSED  152 (159)
Q Consensus       144 g~~p~~~~~  152 (159)
                      |+.||.+.+
T Consensus       341 G~~pf~~~~  349 (467)
T PTZ00284        341 GKLLYDTHD  349 (467)
T ss_pred             CCCCCCCCC
Confidence            999998754

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.95  E-value=3.4e-28  Score=170.40  Aligned_cols=144  Identities=21%  Similarity=0.342  Sum_probs=118.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++...+..++++||+++++|.+.+....    ..+++..+..++.|++.++.+||   +.+++|+|++|.||+++
T Consensus        62 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~  134 (256)
T cd05059          62 VQLYGVCTKQRPIFIVTEYMANGCLLNYLRERK----GKLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVG  134 (256)
T ss_pred             EEEEEEEcCCCceEEEEecCCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEEC
Confidence            357888888889999999999999999886532    35788888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .++.++++|||.+................+..|+|||.+.+..++.++|+||||+++ |++++ |+.||...+
T Consensus       135 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il-~~l~~~g~~p~~~~~  206 (256)
T cd05059         135 EDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLM-WEVFSEGKMPYERFS  206 (256)
T ss_pred             CCCcEEECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHH-HHHhccCCCCCCCCC
Confidence            999999999998765543221111111234569999999888899999999999999 99998 899997653

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=2e-28  Score=181.35  Aligned_cols=143  Identities=21%  Similarity=0.195  Sum_probs=121.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++.+...+..+++||++. ++|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||.||+++
T Consensus       149 v~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~-----~~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~  219 (392)
T PHA03207        149 INLIHAYRWKSTVCMVMPKYK-CDLFTYVDRS-----GPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLD  219 (392)
T ss_pred             cceeeeEeeCCEEEEEehhcC-CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEc
Confidence            567888888889999999995 6888887432     46888999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcce-eeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETR-IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+..++++|||++......... ......++..|+|||.+.+..++.++|+||+||++ |+|++|+.||.+.+.
T Consensus       220 ~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil-~el~~g~~pf~~~~~  292 (392)
T PHA03207        220 EPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVL-FEMSVKNVTLFGKQV  292 (392)
T ss_pred             CCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHH-HHHHHCCCCCCCCCC
Confidence            9999999999988665433221 11234578999999999998999999999999999 999999999976543

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.95  E-value=3.6e-28  Score=187.93  Aligned_cols=147  Identities=25%  Similarity=0.346  Sum_probs=124.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCC---CCCCC--------ccchhhHHHHHHHHHHHHHHhhhcCCCCeEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR---QPNFE--------PVTCSLRLKIAMEIAYGIAYLHVAFSRPIVF   69 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~--------~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h   69 (159)
                      |.+.|+|.+++++++++||+.+|+|.++++..+   .....        .++......++.||+.|++||+   +..++|
T Consensus       365 v~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~---~~~~vH  441 (609)
T KOG0200|consen  365 VNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA---SVPCVH  441 (609)
T ss_pred             hhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh---hCCccc
Confidence            568999999999999999999999999998766   11111        3788889999999999999999   899999


Q ss_pred             ecCCCCCEEecCCCceEEEecCCCcccCCCccee-e-eeecccccccCccccccCCCCCCcceEeccccccCccee-ccc
Q 031436           70 RNVKPSNILFQEQSVAKLFDFSYSESIPEGETRI-R-GRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRA  146 (159)
Q Consensus        70 ~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~-~-~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~  146 (159)
                      |||..+|||+.++..+|++|||+++......... . +...-+..|||||.+....|+.++|+||||+++ ||+++ |..
T Consensus       442 RDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L-~EifsLG~~  520 (609)
T KOG0200|consen  442 RDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILL-WEIFTLGGT  520 (609)
T ss_pred             hhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHH-HHHhhCCCC
Confidence            9999999999999999999999998665543322 1 111146789999999999999999999999999 88888 789


Q ss_pred             ccccC
Q 031436          147 WYRSE  151 (159)
Q Consensus       147 p~~~~  151 (159)
                      ||++.
T Consensus       521 PYp~~  525 (609)
T KOG0200|consen  521 PYPGI  525 (609)
T ss_pred             CCCCC
Confidence            99873

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=8.1e-30  Score=186.58  Aligned_cols=143  Identities=22%  Similarity=0.292  Sum_probs=127.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++-.|.++...|+.||-|-||.|...++..     +.+.......++.-++.|++|||   +++++.|||||+|++++
T Consensus       483 vrLYrTfrd~kyvYmLmEaClGGElWTiLrdR-----g~Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd  554 (732)
T KOG0614|consen  483 VRLYRTFRDSKYVYMLMEACLGGELWTILRDR-----GSFDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLD  554 (732)
T ss_pred             HHHHHHhccchhhhhhHHhhcCchhhhhhhhc-----CCcccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeec
Confidence            34555677788899999999999999999764     45677777889999999999999   99999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCCc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWK  154 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~  154 (159)
                      .++.+|+.|||+++.+..+.  ++.++.|+++|.|||.+.+...+.++|.||+|+++ |||++|++||++.|..
T Consensus       555 ~~Gy~KLVDFGFAKki~~g~--KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli-~ELL~G~pPFs~~dpm  625 (732)
T KOG0614|consen  555 NRGYLKLVDFGFAKKIGSGR--KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILI-YELLTGSPPFSGVDPM  625 (732)
T ss_pred             cCCceEEeehhhHHHhccCC--ceeeecCCcccccchhhhccCcchhhHHHHHHHHH-HHHHcCCCCCCCCchH
Confidence            99999999999999886654  44578999999999999999999999999999999 9999999999998753

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.95  E-value=7e-28  Score=169.93  Aligned_cols=148  Identities=20%  Similarity=0.316  Sum_probs=116.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++.+.+....+++|||+++|+|.+.+...+.......+......++.|++.++.|+|   +++++|+|++|.||+++
T Consensus        58 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~  134 (269)
T cd05087          58 LQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLT  134 (269)
T ss_pred             eeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEc
Confidence            467899988889999999999999999886543222234556677788999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCccee-eeeecccccccCccccccC-------CCCCCcceEeccccccCccee-cccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRI-RGRVMGTFGYLPPEYIATG-------DCNEKCDVYSFDGSRDSGHLT-GRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~-------~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~  151 (159)
                      .+..++++|||.+.......... .....++..|+|||.+.+.       .++.++|+||||+++ +++++ |+.||+..
T Consensus       135 ~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l-~el~~~g~~p~~~~  213 (269)
T cd05087         135 ADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTI-WELFELGSQPYRHL  213 (269)
T ss_pred             CCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHH-HHHHhCCCCCCCCC
Confidence            99999999999876543322111 1123356779999988532       357899999999999 99986 99999754


Q ss_pred             C
Q 031436          152 D  152 (159)
Q Consensus       152 ~  152 (159)
                      +
T Consensus       214 ~  214 (269)
T cd05087         214 S  214 (269)
T ss_pred             C
Confidence            3

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.95  E-value=6.4e-28  Score=173.88  Aligned_cols=143  Identities=22%  Similarity=0.370  Sum_probs=118.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++|+|.. ...++++||+++|+|.+.+....    ..++...+..++.|++.|+.|||   +++++||||||.||+++
T Consensus        72 v~~~g~~~~-~~~~~v~e~~~~g~l~~~l~~~~----~~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~  143 (316)
T cd05108          72 CRLLGICLT-STVQLITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVK  143 (316)
T ss_pred             CeEEEEEcC-CCceeeeecCCCCCHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEec
Confidence            567888876 46789999999999999887542    35677888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceee-eeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIR-GRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~-~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..+|++|||++........... .....+..|+|||.+.+..++.++|+||||+++ |++++ |+.||.+..
T Consensus       144 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l-~el~t~g~~p~~~~~  216 (316)
T cd05108         144 TPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV-WELMTFGSKPYDGIP  216 (316)
T ss_pred             CCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHH-HHHHcCCCCCCCCCC
Confidence            999999999999876654332211 112235679999999988999999999999999 99887 999997754

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.95  E-value=5.5e-28  Score=171.42  Aligned_cols=144  Identities=23%  Similarity=0.375  Sum_probs=118.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++. +...++++||+++|+|.+.+....    ..+++.....++.|++.|+.|+|   +++++|+|++|.||+++
T Consensus        72 v~~~~~~~-~~~~~~i~e~~~~gsL~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~  143 (279)
T cd05111          72 VRLLGICP-GASLQLVTQLSPLGSLLDHVRQHR----DSLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLK  143 (279)
T ss_pred             ceEEEEEC-CCccEEEEEeCCCCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEc
Confidence            46778775 456789999999999999986532    45788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCccee-eeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRI-RGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~  153 (159)
                      .+..+|++|||.+.......... .....++..|++||.+.+..++.++|+||||+++ |++++ |..||.+.+.
T Consensus       144 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il-~el~t~g~~p~~~~~~  217 (279)
T cd05111         144 SDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTV-WEMMSYGAEPYAGMRP  217 (279)
T ss_pred             CCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHH-HHHHcCCCCCCCCCCH
Confidence            99999999999887654322211 1223355679999999888899999999999999 99998 9999987643

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.95  E-value=4.7e-28  Score=169.31  Aligned_cols=144  Identities=24%  Similarity=0.385  Sum_probs=122.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++.+++++||+++++|.+.+.....   ..++...+..++.|++.++.|||   +.+++|+|++|+||+++
T Consensus        62 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~  135 (256)
T cd08529          62 IRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRG---RPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLD  135 (256)
T ss_pred             ehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEe
Confidence            3567888888899999999999999998875422   46788888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||++......... .....++..|+|||...+..++.++|+||||+++ +++++|+.||...+
T Consensus       136 ~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~g~~p~~~~~  205 (256)
T cd08529         136 AYDNVKIGDLGVAKLLSDNTNF-ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVL-YECCTGKHPFDANN  205 (256)
T ss_pred             CCCCEEEcccccceeccCccch-hhccccCccccCHHHhcCCCCCCccchHHHHHHH-HHHHhCCCCCCCCC
Confidence            9999999999987765443222 1223467789999999888899999999999999 99999999997765

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.95  E-value=7.2e-28  Score=168.01  Aligned_cols=144  Identities=24%  Similarity=0.374  Sum_probs=119.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      ++++++|...+..+++|||+++++|.+.+....    ..+.+..+..++.|++.++.++|   +++++|+|++|.||+++
T Consensus        55 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~  127 (250)
T cd05085          55 VKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKK----DELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVG  127 (250)
T ss_pred             CeEEEEEecCCccEEEEECCCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEc
Confidence            467889998899999999999999999886432    34678888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..++++|||++................+..|+|||.+.+..++.++|+||||+++ |++++ |..||.+.+
T Consensus       128 ~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll-~~~~~~g~~p~~~~~  199 (250)
T cd05085         128 ENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILL-WETFSLGVCPYPGMT  199 (250)
T ss_pred             CCCeEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHH-HHHhcCCCCCCCCCC
Confidence            999999999998765433222111122335679999999888899999999999999 99988 999997653

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.95  E-value=6.1e-28  Score=173.08  Aligned_cols=145  Identities=22%  Similarity=0.369  Sum_probs=121.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++.|...+..++++||+++|+|.+.+.....   ..+++.+...++.|++.++.|+|   +++++|+|++|.||+++
T Consensus       102 v~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~---~~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~  175 (302)
T cd05055         102 VNLLGACTIGGPILVITEYCCYGDLLNFLRRKRE---SFLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLT  175 (302)
T ss_pred             ceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEc
Confidence            5688999999999999999999999998865332   34788999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcce-eeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETR-IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..++++|||++......... ......++..|+|||.+.+..++.++|+||+|+++ |++++ |..||.+.+
T Consensus       176 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil-~el~t~g~~p~~~~~  248 (302)
T cd05055         176 HGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILL-WEIFSLGSNPYPGMP  248 (302)
T ss_pred             CCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHH-HHHHhCCCCCcCCCC
Confidence            9999999999998766443221 11222345679999999888899999999999999 99998 999987654

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.95  E-value=9.1e-28  Score=169.78  Aligned_cols=148  Identities=26%  Similarity=0.387  Sum_probs=121.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCC-----CCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQP-----NFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS   75 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~   75 (159)
                      +++++++.++...++++||+++|+|.+.+......     ....+++..+..++.|++.|+.|+|   +.+++|+|++|.
T Consensus        72 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di~p~  148 (277)
T cd05032          72 VRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAAR  148 (277)
T ss_pred             eEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccChh
Confidence            46889999999999999999999999988653211     1124677788889999999999999   899999999999


Q ss_pred             CEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           76 NILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        76 nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      ||+++.++.++++|||.+........ .......++..|+|||.+.+..++.++|+||||+++ |++++ |..||...+
T Consensus       149 nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~el~t~g~~p~~~~~  226 (277)
T cd05032         149 NCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVL-WEMATLAEQPYQGLS  226 (277)
T ss_pred             eEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHH-HHhhccCCCCCccCC
Confidence            99999999999999998776543321 111223346779999999888899999999999999 99998 999997654

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.95  E-value=7.2e-28  Score=170.54  Aligned_cols=148  Identities=30%  Similarity=0.463  Sum_probs=121.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCC---------CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ---------PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN   71 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---------~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~   71 (159)
                      +++++++..+...+++|||+++++|.+.+.....         .....+++..+..++.|++.++.++|   +++++|+|
T Consensus        71 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~h~d  147 (280)
T cd05049          71 VKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFVHRD  147 (280)
T ss_pred             hheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeeccc
Confidence            4678888888999999999999999999865421         11245778888999999999999999   89999999


Q ss_pred             CCCCCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccc
Q 031436           72 VKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYR  149 (159)
Q Consensus        72 l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~  149 (159)
                      ++|.||+++.+..++++|||.+........ .......++..|+|||.+.+..++.++|+||+|+++ |++++ |..||.
T Consensus       148 lkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~e~~~~g~~p~~  226 (280)
T cd05049         148 LATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVL-WEIFTYGKQPWY  226 (280)
T ss_pred             cccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHH-HHHHhcCCCCCC
Confidence            999999999999999999998765433221 111222346779999999999999999999999999 99998 999986


Q ss_pred             cCC
Q 031436          150 SED  152 (159)
Q Consensus       150 ~~~  152 (159)
                      ..+
T Consensus       227 ~~~  229 (280)
T cd05049         227 GLS  229 (280)
T ss_pred             CCC
Confidence            543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.95  E-value=2.6e-28  Score=179.52  Aligned_cols=141  Identities=22%  Similarity=0.337  Sum_probs=115.2

Q ss_pred             eEEEEEecCC-----CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCC
Q 031436            2 RLIGCCLETE-----NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSN   76 (159)
Q Consensus         2 ~l~~~~~~~~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~n   76 (159)
                      ++++++...+     ..++++||+. ++|.+.+...     ..++...+..++.|++.|+.|||   +.+++||||+|+|
T Consensus        63 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~N  133 (372)
T cd07853          63 SALDILQPPHIDPFEEIYVVTELMQ-SDLHKIIVSP-----QPLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGN  133 (372)
T ss_pred             CHhheecCCCccccceEEEEeeccc-cCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHH
Confidence            4566666655     6899999996 6888877543     45788899999999999999999   8999999999999


Q ss_pred             EEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCC
Q 031436           77 ILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        77 il~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      |+++.+..+|++|||++...............++..|+|||.+.+. .++.++|+||+||++ ++|++|+.||.+.+
T Consensus       134 ili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il-~el~~g~~pf~~~~  209 (372)
T cd07853         134 LLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIF-AELLGRRILFQAQS  209 (372)
T ss_pred             EEECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHH-HHHHcCCCCCCCCC
Confidence            9999999999999998865433222222223467889999998874 478999999999999 99999999998764

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.95  E-value=7e-28  Score=173.16  Aligned_cols=140  Identities=24%  Similarity=0.373  Sum_probs=120.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCC-CCeEEecCCCCCEEe
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS-RPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~-~~~~h~~l~~~nil~   79 (159)
                      |+++++|..++..++++||+++++|.+.+...     ..++......++.|++.++.|||   + .+++|+|++|.||++
T Consensus        62 v~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dl~p~nil~  133 (308)
T cd06615          62 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-----GRIPENILGKISIAVLRGLTYLR---EKHKIMHRDVKPSNILV  133 (308)
T ss_pred             CeEEEEEeeCCEEEEEeeccCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hhCCEEECCCChHHEEE
Confidence            57889999999999999999999999998654     45788888999999999999999   5 589999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           80 QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +.+..++++|||++.......   .....++..|+|||.+.+..++.++|+||||+++ +++++|+.||...+
T Consensus       134 ~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l-~~l~~g~~p~~~~~  202 (308)
T cd06615         134 NSRGEIKLCDFGVSGQLIDSM---ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSL-VEMAIGRYPIPPPD  202 (308)
T ss_pred             ecCCcEEEccCCCcccccccc---cccCCCCcCccChhHhcCCCCCccchHHHHHHHH-HHHHhCCCCCCCcc
Confidence            999999999999876543221   1234567889999999888899999999999999 99999999997544

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.95  E-value=8.6e-28  Score=171.25  Aligned_cols=139  Identities=25%  Similarity=0.400  Sum_probs=121.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++.++++|||+++++|.+.+...     ..++...+..++.|++.++.+||   +++++|+||+|.||+++
T Consensus        64 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-----~~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~  135 (290)
T cd05580          64 VNLYGSFQDDSNLYLVMEYVPGGELFSHLRKS-----GRFPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLD  135 (290)
T ss_pred             cceeeEEEcCCeEEEEEecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEC
Confidence            46788888889999999999999999988654     45788888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.++++|||++.......    ....++..|+|||.+.+...+.++|+||||+++ ++|++|+.||...+
T Consensus       136 ~~~~~kl~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~g~~p~~~~~  202 (290)
T cd05580         136 SDGYIKITDFGFAKRVKGRT----YTLCGTPEYLAPEIILSKGYGKAVDWWALGILI-YEMLAGYPPFFDDN  202 (290)
T ss_pred             CCCCEEEeeCCCccccCCCC----CCCCCCccccChhhhcCCCCCccccHHHHHHHH-HHHHhCCCCCCCCC
Confidence            99999999999887654431    223567889999999888889999999999999 99999999997765

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=6.3e-28  Score=169.24  Aligned_cols=138  Identities=27%  Similarity=0.339  Sum_probs=120.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++..++.+++++||+++++|.+.+...     ..+++..+..++.|++.|+.|+|   +.+++|+||+|.||+++
T Consensus        60 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~  131 (260)
T cd05611          60 AKLYYSFQSKDYLYLVMEYLNGGDCASLIKTL-----GGLPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLID  131 (260)
T ss_pred             eeeeeeEEcCCeEEEEEeccCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEC
Confidence            46788998889999999999999999988654     35788888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||++......     ....++..|++||.+.+..++.++|+||+|+++ |++++|..||...+
T Consensus       132 ~~~~~~l~dfg~~~~~~~~-----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il-~~l~~g~~p~~~~~  197 (260)
T cd05611         132 QTGHLKLTDFGLSRNGLEN-----KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVI-FEFLFGYPPFHAET  197 (260)
T ss_pred             CCCcEEEeecccceecccc-----ccCCCCcCccChhhhcCCCCcchhhhHHHHHHH-HHHHHCCCCCCCCC
Confidence            9999999999987654331     123467789999999888889999999999999 99999999997654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.95  E-value=7.4e-28  Score=181.44  Aligned_cols=132  Identities=28%  Similarity=0.394  Sum_probs=114.8

Q ss_pred             CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCC----CceE
Q 031436           11 ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQ----SVAK   86 (159)
Q Consensus        11 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~----~~~~   86 (159)
                      ....++||||++|||...+.+..  |-.++++.+++.++..++.|+.|||   .++|+||||||.||++...    ...|
T Consensus        90 ~~~vlvmEyC~gGsL~~~L~~PE--N~~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyK  164 (732)
T KOG4250|consen   90 RLPVLVMEYCSGGSLRKVLNSPE--NAYGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYK  164 (732)
T ss_pred             ccceEEEeecCCCcHHHHhcCcc--cccCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEe
Confidence            45789999999999999997653  3367999999999999999999999   9999999999999998532    3469


Q ss_pred             EEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceeccccccc
Q 031436           87 LFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        87 l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      ++|||.++.+..+.  .-....||..|++||+... +.|+..+|.|||||++ |+++||..||..
T Consensus       165 LtDfG~Arel~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~Gvtl-Y~caTG~lPF~p  226 (732)
T KOG4250|consen  165 LTDFGAARELDDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTL-YECATGELPFIP  226 (732)
T ss_pred             eecccccccCCCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHH-HHHhccCCCCCc
Confidence            99999999886654  3345789999999999985 7789999999999999 999999999965

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.95  E-value=2e-27  Score=168.68  Aligned_cols=143  Identities=22%  Similarity=0.286  Sum_probs=119.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+..++..++++||+++++|...+....    .++++..+..++.|++.++.+||   +.+++|+||+|.||+++
T Consensus        65 i~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~  137 (282)
T cd06643          65 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELE----RPLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFT  137 (282)
T ss_pred             eeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEc
Confidence            467888888899999999999999988775432    45788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccc-----cCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA-----TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~-----~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||++......... .....++..|+|||.+.     +..++.++|+||||+++ |++++|++||...+
T Consensus       138 ~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil-~el~~g~~p~~~~~  212 (282)
T cd06643         138 LDGDIKLADFGVSAKNTRTIQR-RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITL-IEMAQIEPPHHELN  212 (282)
T ss_pred             cCCCEEEccccccccccccccc-cccccccccccCHhhccccCCCCCCCCccchhhhHHHHH-HHHccCCCCccccC
Confidence            9999999999987655432221 12335678899999874     34578899999999999 99999999997654

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.95  E-value=8.7e-28  Score=171.81  Aligned_cols=147  Identities=22%  Similarity=0.320  Sum_probs=119.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCC-----------CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ-----------PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVF   69 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-----------~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h   69 (159)
                      |++++++...+..++++||+++++|.+++.....           .....+++..+..++.|++.|+++||   +++++|
T Consensus        66 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH  142 (297)
T cd05089          66 INLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIH  142 (297)
T ss_pred             hheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCccc
Confidence            4678888888899999999999999998865321           01134778888999999999999999   899999


Q ss_pred             ecCCCCCEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-ccccc
Q 031436           70 RNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWY  148 (159)
Q Consensus        70 ~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~  148 (159)
                      +||+|.|++++.+..+|++|||++........  ......+..|+|||...+..++.++|+||||+++ |+|++ |..||
T Consensus       143 ~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il-~el~t~g~~pf  219 (297)
T cd05089         143 RDLAARNVLVGENLASKIADFGLSRGEEVYVK--KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLL-WEIVSLGGTPY  219 (297)
T ss_pred             CcCCcceEEECCCCeEEECCcCCCccccceec--cCCCCcCccccCchhhccCCCCchhhHHHHHHHH-HHHHcCCCCCC
Confidence            99999999999999999999998754321111  1111234569999999888899999999999999 99997 99999


Q ss_pred             ccCCC
Q 031436          149 RSEDW  153 (159)
Q Consensus       149 ~~~~~  153 (159)
                      ...+.
T Consensus       220 ~~~~~  224 (297)
T cd05089         220 CGMTC  224 (297)
T ss_pred             CCCCH
Confidence            77654

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.95  E-value=1.3e-27  Score=168.13  Aligned_cols=139  Identities=22%  Similarity=0.382  Sum_probs=114.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++..+...++++||+++|+|..++....    ..+++.....++.|++.|+.|+|   +++++|+|++|+||+++
T Consensus        67 v~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~  139 (262)
T cd05077          67 VLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKS----DVLTTPWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLA  139 (262)
T ss_pred             eeEEEEEecCCCCEEEEecccCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEe
Confidence            578899999899999999999999988775432    45788889999999999999999   89999999999999997


Q ss_pred             CCCc-------eEEEecCCCcccCCCcceeeeeecccccccCccccc-cCCCCCCcceEeccccccCcce-ecccccccC
Q 031436           81 EQSV-------AKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA-TGDCNEKCDVYSFDGSRDSGHL-TGRAWYRSE  151 (159)
Q Consensus        81 ~~~~-------~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~-~~~~~~~~DvwS~g~~~~~~~~-~g~~p~~~~  151 (159)
                      .+..       +++.|||.+.......     ...++..|+|||.+. +..++.++|+||||+++ |+++ .|+.||...
T Consensus       140 ~~~~~~~~~~~~~l~d~g~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l-~el~~~~~~p~~~~  213 (262)
T cd05077         140 REGIDGECGPFIKLSDPGIPITVLSRQ-----ECVERIPWIAPECVEDSKNLSIAADKWSFGTTL-WEICYNGEIPLKDK  213 (262)
T ss_pred             cCCccCCCCceeEeCCCCCCccccCcc-----cccccccccChhhhcCCCCCCchhHHHHHHHHH-HHHHhCCCCCCCCc
Confidence            6543       7899999876543221     124567799999886 46689999999999999 8886 688888764


Q ss_pred             C
Q 031436          152 D  152 (159)
Q Consensus       152 ~  152 (159)
                      +
T Consensus       214 ~  214 (262)
T cd05077         214 T  214 (262)
T ss_pred             c
Confidence            3

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.95  E-value=1.7e-28  Score=168.11  Aligned_cols=142  Identities=23%  Similarity=0.385  Sum_probs=119.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+.+|+|..+...++.||.|. -.+..++++-.    +++++....++...++.||.||..  +.+++|||+||.|||+|
T Consensus       154 V~c~GyFi~n~dV~IcMelMs-~C~ekLlkrik----~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlD  226 (391)
T KOG0983|consen  154 VQCFGYFITNTDVFICMELMS-TCAEKLLKRIK----GPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLD  226 (391)
T ss_pred             eeeeeEEeeCchHHHHHHHHH-HHHHHHHHHhc----CCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEc
Confidence            678999999999999999995 36666666543    568888888899999999999985  67899999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc---CCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT---GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~---~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ..+.+|++|||.+..+.....+  +.-.|.+.|||||-+.-   ..|+.++|+||||+++ +||.||..||.+-+
T Consensus       227 e~GniKlCDFGIsGrlvdSkAh--trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITl-veLaTg~yPy~~c~  298 (391)
T KOG0983|consen  227 ERGNIKLCDFGISGRLVDSKAH--TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITL-VELATGQYPYKGCK  298 (391)
T ss_pred             cCCCEEeecccccceeeccccc--ccccCCccccCccccCCCCCCccchhhhhhhhccch-hhhhcccCCCCCCC
Confidence            9999999999998877654332  23357788999999863   3689999999999999 99999999999844

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.95  E-value=1.5e-28  Score=172.68  Aligned_cols=144  Identities=36%  Similarity=0.557  Sum_probs=117.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      ++++|+|.+.+..++++||+++|+|.+++.....   ..+++.....++.|++.|+.|||   +++++|++|+++||+++
T Consensus        64 ~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~---~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~  137 (259)
T PF07714_consen   64 VKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNK---EPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLD  137 (259)
T ss_dssp             E-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCT---TTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEE
T ss_pred             cccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccc---ccccccccccccccccc
Confidence            4789999988889999999999999999986522   56788999999999999999999   88999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~  151 (159)
                      .+..+|++|||++........ ........+..|+|||.+.+..++.++||||||+++ +|+++ |+.||...
T Consensus       138 ~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l-~ei~~~~~~p~~~~  209 (259)
T PF07714_consen  138 SNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLL-YEILTLGKFPFSDY  209 (259)
T ss_dssp             TTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHH-HHHHTTSSGTTTTS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccc
Confidence            999999999998876632221 122223456789999999988899999999999999 99999 78998765

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.95  E-value=1.2e-28  Score=166.44  Aligned_cols=143  Identities=29%  Similarity=0.364  Sum_probs=118.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+|.....+.+..++|+|+++|++|-.-+-..     ..+++....+++.|++.++.|+|   .++|+|||+||+|+++.
T Consensus        73 vrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R-----~~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP~nllLA  144 (355)
T KOG0033|consen   73 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-----EFYSEADASHCIQQILEALAYCH---SNGIVHRDLKPENLLLA  144 (355)
T ss_pred             eehhhhhcccceeEEEEecccchHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeee
Confidence            35555666677889999999999987644321     34667778899999999999999   99999999999999995


Q ss_pred             C---CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCCc
Q 031436           81 E---QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWK  154 (159)
Q Consensus        81 ~---~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~  154 (159)
                      .   ...+|++|||++..+....  .-.-+.|++.|+|||++...+|+..+|+|+-|+++ |.++.|.+||-+++..
T Consensus       145 SK~~~A~vKL~~FGvAi~l~~g~--~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViL-fiLL~G~~PF~~~~~~  218 (355)
T KOG0033|consen  145 SKAKGAAVKLADFGLAIEVNDGE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL-YILLVGYPPFWDEDQH  218 (355)
T ss_pred             eccCCCceeecccceEEEeCCcc--ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHH-HHHHhCCCCCCCccHH
Confidence            3   3468999999998886322  22335789999999999999999999999999999 9999999999987654

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.95  E-value=8.3e-28  Score=178.24  Aligned_cols=109  Identities=21%  Similarity=0.321  Sum_probs=90.6

Q ss_pred             ccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecCCCcccCCCcce-eeeeecccccccCcc
Q 031436           39 PVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR-IRGRVMGTFGYLPPE  117 (159)
Q Consensus        39 ~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ape  117 (159)
                      .+++..+..++.|++.|+.|||   +.+++|+|++|.||+++.+..+|++|||++......... ......++..|+|||
T Consensus       233 ~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE  309 (400)
T cd05105         233 GLTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPE  309 (400)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChh
Confidence            4667778889999999999999   899999999999999999999999999988765432211 112223567799999


Q ss_pred             ccccCCCCCCcceEeccccccCccee-cccccccC
Q 031436          118 YIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSE  151 (159)
Q Consensus       118 ~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~  151 (159)
                      .+.+..++.++|+||||+++ |++++ |..||...
T Consensus       310 ~~~~~~~~~~~DiwSlGvil-~ellt~g~~P~~~~  343 (400)
T cd05105         310 SIFDNLYTTLSDVWSYGILL-WEIFSLGGTPYPGM  343 (400)
T ss_pred             hhcCCCCCchhhHHHHHHHH-HHHHHCCCCCCccc
Confidence            99888899999999999999 99886 89998764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.95  E-value=1.2e-27  Score=167.93  Aligned_cols=144  Identities=25%  Similarity=0.365  Sum_probs=120.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+.+....+++|||+++++|.+++.....   ..++...+..++.|++.|+.|||   +++++|+|++|.|++++
T Consensus        65 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~  138 (261)
T cd05148          65 ISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEG---QVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVG  138 (261)
T ss_pred             hheeeeEecCCCeEEEEeecccCCHHHHHhcCCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEc
Confidence            4578888888999999999999999999876432   45788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..++++|||.+.......... ....++..|++||...+..++.++|+||||+++ +++++ |+.||...+
T Consensus       139 ~~~~~kl~d~g~~~~~~~~~~~~-~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l-~~l~~~g~~p~~~~~  209 (261)
T cd05148         139 EDLVCKVADFGLARLIKEDVYLS-SDKKIPYKWTAPEAASHGTFSTKSDVWSFGILL-YEMFTYGQVPYPGMN  209 (261)
T ss_pred             CCceEEEccccchhhcCCccccc-cCCCCceEecCHHHHccCCCCchhhHHHHHHHH-HHHHcCCCCCCCcCC
Confidence            99999999999886653322111 122345679999999888899999999999999 99998 899997654

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.95  E-value=8.2e-28  Score=176.13  Aligned_cols=138  Identities=22%  Similarity=0.315  Sum_probs=113.2

Q ss_pred             CeEEEEEecCC------CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCLETE------NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~~~------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      |++++++...+      ..+++|||+. +++.+.+.       ..++...+..++.|++.|+.|||   +++++||||+|
T Consensus        83 v~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp  151 (359)
T cd07876          83 ISLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIH-------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP  151 (359)
T ss_pred             eeeeeeeccCCCccccceeEEEEeCCC-cCHHHHHh-------ccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCH
Confidence            35667775433      4689999996 47766653       23667788889999999999999   89999999999


Q ss_pred             CCEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           75 SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        75 ~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +||+++.++.++++|||++........  .....++..|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       152 ~NIl~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il-~el~tg~~pf~~~~  226 (359)
T cd07876         152 SNIVVKSDCTLKILDFGLARTACTNFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM-GELVKGSVIFQGTD  226 (359)
T ss_pred             HHEEECCCCCEEEecCCCccccccCcc--CCCCcccCCCCCchhccCCCCCcchhhHHHHHHH-HHHHhCCCCCCCCC
Confidence            999999999999999998865433221  1224568889999999999999999999999999 99999999998764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.95  E-value=1.1e-28  Score=195.46  Aligned_cols=142  Identities=27%  Similarity=0.371  Sum_probs=120.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+-+|+=.++...+|+||||++|+|.+.+...+     ...+....-+..|++.|+.|||   +.|++|||+||.||+++
T Consensus      1297 V~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gr-----i~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld 1368 (1509)
T KOG4645|consen 1297 VRYYGVEVHREKVYIFMEYCEGGSLASLLEHGR-----IEDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLD 1368 (1509)
T ss_pred             cccCceeecHHHHHHHHHHhccCcHHHHHHhcc-----hhhhhHHHHHHHHHHHHHHHHH---hcCceecCCCccceeee
Confidence            466788888889999999999999999997653     3555556678899999999999   99999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcce---eeeeecccccccCccccccC---CCCCCcceEeccccccCcceecccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETR---IRGRVMGTFGYLPPEYIATG---DCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~---~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .++.+|+.|||.+..+.++...   ......||+-|||||++.+.   .-..++||||+||++ .||+||+.||.-.
T Consensus      1369 ~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVV-lEM~tGkrPW~~~ 1444 (1509)
T KOG4645|consen 1369 FNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVV-LEMATGKRPWAEL 1444 (1509)
T ss_pred             cCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceE-EEeecCCCchhhc
Confidence            9999999999998877655321   12345789999999999764   467889999999999 9999999999754

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.95  E-value=1.1e-27  Score=170.37  Aligned_cols=140  Identities=22%  Similarity=0.318  Sum_probs=114.9

Q ss_pred             eEEEEEec-----CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCC
Q 031436            2 RLIGCCLE-----TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSN   76 (159)
Q Consensus         2 ~l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~n   76 (159)
                      ++++++..     ....++++|++. ++|.+.+.....   ..+++..+..++.|++.|+.|+|   +.+++|+|++|.|
T Consensus        66 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~---~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~N  138 (288)
T cd07863          66 RLMDVCATSRTDRETKVTLVFEHVD-QDLRTYLDKVPP---PGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPEN  138 (288)
T ss_pred             eeeeeeccccCCCCceEEEEEcccc-cCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHH
Confidence            56666653     234789999996 588888765422   45788999999999999999999   8999999999999


Q ss_pred             EEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           77 ILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        77 il~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      |+++.+..++++|||++........  .....++..|+|||.+.+..++.++|+||+|+++ |+|++|++||.+.
T Consensus       139 ili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l-~~l~~g~~~f~~~  210 (288)
T cd07863         139 ILVTSGGQVKLADFGLARIYSCQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIF-AEMFRRKPLFCGN  210 (288)
T ss_pred             EEECCCCCEEECccCccccccCccc--CCCccccccccCchHhhCCCCCCcchhhhHHHHH-HHHHhCCcCcCCC
Confidence            9999999999999998875533221  1223467889999999888899999999999999 9999999999654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.95  E-value=2e-27  Score=166.59  Aligned_cols=142  Identities=25%  Similarity=0.382  Sum_probs=116.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+. +...+++|||+++|+|.+.+...     ..+++.....++.|++.++.++|   +++++|+|++|.||+++
T Consensus        59 ~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~  129 (257)
T cd05116          59 VRMIGICE-AESWMLVMELAELGPLNKFLQKN-----KHVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLV  129 (257)
T ss_pred             ceEEEEEc-CCCcEEEEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEc
Confidence            45677775 45778999999999999988643     35778889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCccee--eeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRI--RGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..++++|||.+..........  .....++..|+|||.+....++.++|+||||+++ |++++ |+.||...+
T Consensus       130 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~el~t~g~~p~~~~~  203 (257)
T cd05116         130 TQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLM-WEAFSYGQKPYKGMK  203 (257)
T ss_pred             CCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHH-HHHHhCCCCCCCCCC
Confidence            99999999999887664433211  1112234679999999888889999999999999 99997 999997653

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.95  E-value=1.1e-27  Score=169.50  Aligned_cols=148  Identities=24%  Similarity=0.338  Sum_probs=119.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCC-----CCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQP-----NFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS   75 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~   75 (159)
                      |++++++.+++..+++|||+++++|.+.+...+..     ....+.+..+..++.|++.++.|||   +.+++|+||+|.
T Consensus        72 v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~  148 (277)
T cd05062          72 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAAR  148 (277)
T ss_pred             eeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCcchh
Confidence            56788998889999999999999999988653211     0123456777889999999999999   899999999999


Q ss_pred             CEEecCCCceEEEecCCCcccCCCccee-eeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           76 NILFQEQSVAKLFDFSYSESIPEGETRI-RGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        76 nil~~~~~~~~l~d~~~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      ||+++.+..++++|||++.......... .....++..|+|||.+.+..++.++|+||||+++ |++++ |..||.+.+
T Consensus       149 Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~el~~~~~~p~~~~~  226 (277)
T cd05062         149 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL-WEIATLAEQPYQGMS  226 (277)
T ss_pred             eEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHH-HHHHcCCCCCCCCCC
Confidence            9999999999999999876554322211 1122345679999999888899999999999999 99998 788987653

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.95  E-value=8.9e-28  Score=173.91  Aligned_cols=144  Identities=18%  Similarity=0.236  Sum_probs=116.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++++|..++..++++||+++|+|.+.+.....   ..+++..+..++.|++.|+.|||   +++++|+||||.||+++
T Consensus        62 v~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~---~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~  135 (327)
T cd08227          62 VPYRATFIADNELWVVTSFMAYGSAKDLICTHFM---DGMSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILIS  135 (327)
T ss_pred             eeEEEEEEECCEEEEEEeccCCCcHHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEe
Confidence            5788999999999999999999999998865322   34788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcce------eeeeecccccccCcccccc--CCCCCCcceEeccccccCcceecccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETR------IRGRVMGTFGYLPPEYIAT--GDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~------~~~~~~~~~~~~ape~~~~--~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .+..+++.||+...........      ......++..|+|||.+.+  ..++.++|+||||+++ +++++|+.||...
T Consensus       136 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il-~el~~g~~pf~~~  213 (327)
T cd08227         136 VDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITA-CELANGHVPFKDM  213 (327)
T ss_pred             cCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHH-HHHHHCCCCCCCc
Confidence            9999999998754332211110      0011234566999999875  4588999999999999 9999999999754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.95  E-value=6.3e-28  Score=172.54  Aligned_cols=141  Identities=23%  Similarity=0.395  Sum_probs=119.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+..+...++|+||+++++|.+.+..      ..+++.+...++.|++.++.|||   +.+++|+||+|.||+++
T Consensus        80 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~------~~~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~  150 (296)
T cd06654          80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLG  150 (296)
T ss_pred             eeEEEEEEeCCEEEEeecccCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEc
Confidence            4678888888899999999999999998853      34677888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||.+......... .....++..|+|||.+.+..++.++|+||||+++ |++++|+.||...+
T Consensus       151 ~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil-~~l~~g~~pf~~~~  220 (296)
T cd06654         151 MDGSVKLTDFGFCAQITPEQSK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMA-IEMIEGEPPYLNEN  220 (296)
T ss_pred             CCCCEEECccccchhccccccc-cCcccCCccccCHHHHcCCCCCccchHHHHHHHH-HHHHhCCCCCCCCC
Confidence            9999999999987654322211 1223467789999999888899999999999999 99999999997654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.95  E-value=2.5e-27  Score=170.68  Aligned_cols=148  Identities=23%  Similarity=0.352  Sum_probs=120.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCC-----------CCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQP-----------NFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVF   69 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-----------~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h   69 (159)
                      |+++++|.+++..++++||+++|+|.+++......           ....+++..+..++.|++.++.|+|   +++++|
T Consensus        81 v~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H  157 (314)
T cd05099          81 INLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---SRRCIH  157 (314)
T ss_pred             eeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH---HCCeee
Confidence            46888998888999999999999999988653211           1135778888999999999999999   899999


Q ss_pred             ecCCCCCEEecCCCceEEEecCCCcccCCCcce-eeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccc
Q 031436           70 RNVKPSNILFQEQSVAKLFDFSYSESIPEGETR-IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAW  147 (159)
Q Consensus        70 ~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p  147 (159)
                      +|++|.||+++.+..++++|||.+......... ......++..|+|||.+.+..++.++|+||||+++ |++++ |..|
T Consensus       158 ~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l-~el~~~g~~p  236 (314)
T cd05099         158 RDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILM-WEIFTLGGSP  236 (314)
T ss_pred             ccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHH-HHHHhCCCCC
Confidence            999999999999999999999988765432111 11112234579999999888899999999999999 99998 8899


Q ss_pred             cccCC
Q 031436          148 YRSED  152 (159)
Q Consensus       148 ~~~~~  152 (159)
                      |.+.+
T Consensus       237 ~~~~~  241 (314)
T cd05099         237 YPGIP  241 (314)
T ss_pred             CCCCC
Confidence            87654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.2e-27  Score=172.37  Aligned_cols=146  Identities=23%  Similarity=0.291  Sum_probs=121.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+.++...++++||+.+++|.+.+.....   ..+++.....++.|++.++.|||   +.+++|+||+|+||+++
T Consensus        64 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~  137 (316)
T cd05574          64 PTLYASFQTETYLCLVMDYCPGGELFRLLQRQPG---KCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLH  137 (316)
T ss_pred             hhheeeeecCCEEEEEEEecCCCCHHHHHHhCCC---CccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEc
Confidence            4677888888899999999999999998865322   46788888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcce----------------------------eeeeecccccccCccccccCCCCCCcceEe
Q 031436           81 EQSVAKLFDFSYSESIPEGETR----------------------------IRGRVMGTFGYLPPEYIATGDCNEKCDVYS  132 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~ape~~~~~~~~~~~DvwS  132 (159)
                      .+..+++.|||++.........                            ......++..|+|||.+.+..++.++|+||
T Consensus       138 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~s  217 (316)
T cd05574         138 ESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWT  217 (316)
T ss_pred             CCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHH
Confidence            9999999999987644321100                            001234677899999999888999999999


Q ss_pred             ccccccCcceecccccccCCC
Q 031436          133 FDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus       133 ~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      ||+++ |++++|+.||.+.+.
T Consensus       218 lG~ll-~~l~~g~~pf~~~~~  237 (316)
T cd05574         218 LGILL-YEMLYGTTPFKGSNR  237 (316)
T ss_pred             HHHHH-HHHhhCCCCCCCCch
Confidence            99999 999999999987654

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.94  E-value=1.4e-27  Score=172.04  Aligned_cols=147  Identities=22%  Similarity=0.319  Sum_probs=113.9

Q ss_pred             CeEEEEEec--CCCceEEEEecCCCChHHHhhCCCC----CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCLE--TENPVLVFEYVEYGTLADRIYHPRQ----PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      |++++++..  +...++++||+. ++|.+.+.....    .....++...+..++.|++.|+.|||   +.+++||||||
T Consensus        61 v~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp  136 (317)
T cd07868          61 ISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKP  136 (317)
T ss_pred             cceeeeEecCCCcEEEEEEeccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCH
Confidence            456777754  445789999995 588887653221    11235788889999999999999999   89999999999


Q ss_pred             CCEEec----CCCceEEEecCCCcccCCCcce--eeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccc
Q 031436           75 SNILFQ----EQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAW  147 (159)
Q Consensus        75 ~nil~~----~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p  147 (159)
                      +||++.    ....+|++|||++.........  ......++..|+|||.+.+. .++.++|+||+||++ ++|++|++|
T Consensus       137 ~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il-~el~~g~~~  215 (317)
T cd07868         137 ANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIF-AELLTSEPI  215 (317)
T ss_pred             HHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHH-HHHHhCCCC
Confidence            999993    4568999999998765432211  11234568889999998774 588999999999999 999999999


Q ss_pred             cccCC
Q 031436          148 YRSED  152 (159)
Q Consensus       148 ~~~~~  152 (159)
                      |.+.+
T Consensus       216 f~~~~  220 (317)
T cd07868         216 FHCRQ  220 (317)
T ss_pred             ccCCc
Confidence            97543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.94  E-value=9.4e-28  Score=189.45  Aligned_cols=148  Identities=24%  Similarity=0.316  Sum_probs=120.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCC------CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ------PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      |++++++.+++..+++|||+++|+|.+.+.....      ......+...+..++.|++.|+.|+|   +.+++||||||
T Consensus        65 Vkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKP  141 (932)
T PRK13184         65 VPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKP  141 (932)
T ss_pred             CeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCch
Confidence            5688999999999999999999999998864211      01123455667889999999999999   89999999999


Q ss_pred             CCEEecCCCceEEEecCCCcccCCCc-----------------ceeeeeecccccccCccccccCCCCCCcceEeccccc
Q 031436           75 SNILFQEQSVAKLFDFSYSESIPEGE-----------------TRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSR  137 (159)
Q Consensus        75 ~nil~~~~~~~~l~d~~~~~~~~~~~-----------------~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~  137 (159)
                      +||+++.++.++++|||++.......                 ........|++.|+|||.+.+..++.++|+||+||++
T Consensus       142 eNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVIL  221 (932)
T PRK13184        142 DNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVIL  221 (932)
T ss_pred             heEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHH
Confidence            99999999999999999887552110                 0011123578899999999999999999999999999


Q ss_pred             cCcceecccccccCC
Q 031436          138 DSGHLTGRAWYRSED  152 (159)
Q Consensus       138 ~~~~~~g~~p~~~~~  152 (159)
                       ++|++|+.||...+
T Consensus       222 -yELLTG~~PF~~~~  235 (932)
T PRK13184        222 -YQMLTLSFPYRRKK  235 (932)
T ss_pred             -HHHHHCCCCCCCcc
Confidence             99999999997644

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.94  E-value=3.4e-27  Score=165.65  Aligned_cols=144  Identities=24%  Similarity=0.348  Sum_probs=117.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++.+.+.+ ...++++||+++++|.+.+.....   ...++..+..++.|++.++.++|   +++++|+||+|.|++++
T Consensus        64 ~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~  136 (260)
T cd05073          64 VKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEG---SKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVS  136 (260)
T ss_pred             ceEEEEEcC-CCeEEEEEeCCCCcHHHHHHhCCc---cccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEc
Confidence            456677766 778999999999999999865422   45677888889999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..++++|||.+...............++..|+|||.+....++.++|+||||+++ +++++ |+.||.+.+
T Consensus       137 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l-~~l~t~g~~p~~~~~  208 (260)
T cd05073         137 ASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL-MEIVTYGRIPYPGMS  208 (260)
T ss_pred             CCCcEEECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHH-HHHHhcCCCCCCCCC
Confidence            999999999998765543222211222345679999999888899999999999999 99998 999998754

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.94  E-value=1.9e-27  Score=166.57  Aligned_cols=142  Identities=23%  Similarity=0.351  Sum_probs=117.1

Q ss_pred             CeEEEEEe-cCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe
Q 031436            1 MRLIGCCL-ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~   79 (159)
                      +++++++. .++..++++||+++++|.+.+.....   ..+++.....++.|++.++.++|   +++++|+||+|.||++
T Consensus        62 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~  135 (256)
T cd05082          62 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLV  135 (256)
T ss_pred             eeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEE
Confidence            35677654 45678999999999999998865432   34778888899999999999999   8999999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCC
Q 031436           80 QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDW  153 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~  153 (159)
                      +.+..++++|||++........    ....+..|+|||.+.+..++.++|+||||+++ |++++ |+.||...+.
T Consensus       136 ~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~-~~l~~~g~~p~~~~~~  205 (256)
T cd05082         136 SEDNVAKVSDFGLTKEASSTQD----TGKLPVKWTAPEALREKKFSTKSDVWSFGILL-WEIYSFGRVPYPRIPL  205 (256)
T ss_pred             cCCCcEEecCCccceeccccCC----CCccceeecCHHHHccCCCCchhhhHHHHHHH-HHHHhCCCCCCCCCCH
Confidence            9999999999998775433221    12345679999999888899999999999999 99997 9999977654

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.94  E-value=2.4e-27  Score=176.24  Aligned_cols=144  Identities=23%  Similarity=0.314  Sum_probs=126.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++.+......+++||||+.+|.+.+.+....     ...+.....+..|++++++|+|   ++.++|||||++|++++
T Consensus       118 vkl~~v~~t~~~lylV~eya~~ge~~~yl~~~g-----r~~e~~ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~  189 (596)
T KOG0586|consen  118 VKLFSVIETEATLYLVMEYASGGELFDYLVKHG-----RMKEKEARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLD  189 (596)
T ss_pred             eeeeeeeeecceeEEEEEeccCchhHHHHHhcc-----cchhhhhhhhhHHHHHHHHHHh---hcceeccccchhhcccc
Confidence            588999998999999999999999999998763     3455777788999999999999   99999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCC-CCCcceEeccccccCcceecccccccCCCcc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC-NEKCDVYSFDGSRDSGHLTGRAWYRSEDWKP  155 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~-~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~~  155 (159)
                      .+.++||+|||++..+...  ....+..|++.|.|||+..+.++ .+++|+||+|+++ |.+++|..||++.+.+.
T Consensus       190 ~~mnikIaDfgfS~~~~~~--~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvl-y~LV~GsLPFDG~~lk~  262 (596)
T KOG0586|consen  190 ENMNIKIADFGFSTFFDYG--LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVL-YALVEGSLPFDGQNLKE  262 (596)
T ss_pred             cccceeeeccccceeeccc--ccccccCCCCCccChHhhcCcccCCcceehhhhhhhh-eeeeecccccCCccccc
Confidence            9999999999999877533  23456789999999999998887 5889999999999 99999999999987653

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.94  E-value=2.7e-27  Score=168.01  Aligned_cols=148  Identities=25%  Similarity=0.380  Sum_probs=119.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCC------------CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ------------PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV   68 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~   68 (159)
                      |++++++..+...+++|||+++++|.+.+.....            .....+++.....++.|++.++.|+|   +++++
T Consensus        70 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~  146 (283)
T cd05090          70 VCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFV  146 (283)
T ss_pred             eeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCee
Confidence            4678888888999999999999999998753211            01134677888899999999999999   89999


Q ss_pred             EecCCCCCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-ccc
Q 031436           69 FRNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRA  146 (159)
Q Consensus        69 h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~  146 (159)
                      |+|++|.|++++.+..++++|||++........ .......++..|+|||.+.+..++.++|+||||+++ ++|++ |..
T Consensus       147 H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il-~el~~~g~~  225 (283)
T cd05090         147 HKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVL-WEIFSFGLQ  225 (283)
T ss_pred             hhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHH-HHHHcCCCC
Confidence            999999999999999999999998876543221 111222345679999999888899999999999999 99998 999


Q ss_pred             ccccCC
Q 031436          147 WYRSED  152 (159)
Q Consensus       147 p~~~~~  152 (159)
                      ||.+.+
T Consensus       226 p~~~~~  231 (283)
T cd05090         226 PYYGFS  231 (283)
T ss_pred             CCCCCC
Confidence            987643

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.94  E-value=1.1e-27  Score=172.08  Aligned_cols=142  Identities=21%  Similarity=0.331  Sum_probs=117.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++..++..+++|||+. ++|.+.+....    ..++...+..++.|++.|+.|||   +++++||||+|.||+++
T Consensus        67 v~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~  138 (309)
T cd07872          67 VTLHDIVHTDKSLTLVFEYLD-KDLKQYMDDCG----NIMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLIN  138 (309)
T ss_pred             ceEEEEEeeCCeEEEEEeCCC-CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEC
Confidence            568899998899999999996 58888776532    34677888889999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.++++|||.+......... .....++..|+|||.+.+ ..++.++|+||+|+++ ++|++|+.||.+.+
T Consensus       139 ~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il-~el~tg~~pf~~~~  209 (309)
T cd07872         139 ERGELKLADFGLARAKSVPTKT-YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIF-FEMASGRPLFPGST  209 (309)
T ss_pred             CCCCEEECccccceecCCCccc-cccccccccccCCHHHhCCCCCCcHHHHHHHHHHH-HHHHhCCCCCCCCC
Confidence            9999999999987654332221 112346778999998865 4578999999999999 99999999997754

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.94  E-value=2.3e-27  Score=166.84  Aligned_cols=144  Identities=27%  Similarity=0.325  Sum_probs=116.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+. ....+++|||+++|+|.+.+.....   ..+++.....++.|++.++.++|   +.+++|+|++|.||+++
T Consensus        64 ~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~  136 (262)
T cd05071          64 VQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVG  136 (262)
T ss_pred             ceEEEEEC-CCCcEEEEEcCCCCcHHHHHhhccc---cCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEc
Confidence            35666664 4568999999999999998865321   45678888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..++++|||.+...............++..|++||...+..++.++|+||||+++ |++++ |+.||.+.+
T Consensus       137 ~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l-~ellt~g~~p~~~~~  208 (262)
T cd05071         137 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL-TELTTKGRVPYPGMV  208 (262)
T ss_pred             CCCcEEeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHH-HHHHcCCCCCCCCCC
Confidence            999999999998865543322111122345679999999888899999999999999 99999 889997654

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.94  E-value=1.8e-27  Score=170.67  Aligned_cols=149  Identities=22%  Similarity=0.331  Sum_probs=120.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCC-----------CCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQP-----------NFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVF   69 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-----------~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h   69 (159)
                      +++++.+...+..+++|||+.+|+|.+.+...+..           ....+++..+..++.|++.|+.|||   +++++|
T Consensus        84 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~givH  160 (304)
T cd05101          84 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIH  160 (304)
T ss_pred             hheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---HCCeee
Confidence            46788999889999999999999999988754321           1134677788899999999999999   899999


Q ss_pred             ecCCCCCEEecCCCceEEEecCCCcccCCCccee-eeeecccccccCccccccCCCCCCcceEeccccccCccee-cccc
Q 031436           70 RNVKPSNILFQEQSVAKLFDFSYSESIPEGETRI-RGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAW  147 (159)
Q Consensus        70 ~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p  147 (159)
                      +||+|.||+++.+..++++|||.+.......... .....++..|+|||.+.+..++.++|+||||+++ |++++ |..|
T Consensus       161 ~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~el~~~g~~p  239 (304)
T cd05101         161 RDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM-WEIFTLGGSP  239 (304)
T ss_pred             cccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHH-HHHHcCCCCC
Confidence            9999999999999999999999887654322211 1122345679999999888899999999999999 99988 7888


Q ss_pred             cccCCC
Q 031436          148 YRSEDW  153 (159)
Q Consensus       148 ~~~~~~  153 (159)
                      |.+.+.
T Consensus       240 ~~~~~~  245 (304)
T cd05101         240 YPGIPV  245 (304)
T ss_pred             cccCCH
Confidence            876543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=3e-28  Score=171.41  Aligned_cols=135  Identities=24%  Similarity=0.371  Sum_probs=114.9

Q ss_pred             CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEe
Q 031436           10 TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFD   89 (159)
Q Consensus        10 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d   89 (159)
                      -+..|+|+|+|+ -+|.+.++.+     +.++...+..+++|+++|++|+|   +.+++||||||.|++++.+-.+|++|
T Consensus        98 f~DvYiV~elMe-tDL~~iik~~-----~~L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~D  168 (359)
T KOG0660|consen   98 FNDVYLVFELME-TDLHQIIKSQ-----QDLTDDHAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKICD  168 (359)
T ss_pred             cceeEEehhHHh-hHHHHHHHcC-----ccccHHHHHHHHHHHHHhcchhh---cccccccccchhheeeccCCCEEecc
Confidence            356899999995 5998888764     44888999999999999999999   89999999999999999998899999


Q ss_pred             cCCCcccCCCcc-eeeeeecccccccCccccc-cCCCCCCcceEeccccccCcceecccccccCCCc
Q 031436           90 FSYSESIPEGET-RIRGRVMGTFGYLPPEYIA-TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWK  154 (159)
Q Consensus        90 ~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~-~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~  154 (159)
                      ||+++...+... ...+.+..|..|+|||.+. ...|+...||||+||++ .||++|++.|+|.+.-
T Consensus       169 FGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~-AEmL~gkplFpG~d~v  234 (359)
T KOG0660|consen  169 FGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCIL-AEMLTGKPLFPGKDYV  234 (359)
T ss_pred             ccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHH-HHHHcCCCCCCCCchH
Confidence            999988754311 1123456788899999875 56799999999999999 9999999999998753

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.94  E-value=1.9e-27  Score=167.33  Aligned_cols=143  Identities=24%  Similarity=0.405  Sum_probs=121.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+.+..++++||+++++|.+.+...     ..++...+..++.|++.++.++|   +++++|+|++|+||+++
T Consensus        69 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~  140 (267)
T cd06628          69 VQYLGSSLDADHLNIFLEYVPGGSVAALLNNY-----GAFEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVD  140 (267)
T ss_pred             eeEEEEEEeCCccEEEEEecCCCCHHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEc
Confidence            46788898889999999999999999988654     45778888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcc-----eeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGET-----RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~-----~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||.+.....+..     .......++..|+|||.+.+..++.++|+||+|+++ +++++|+.||...+
T Consensus       141 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il-~~l~~g~~p~~~~~  216 (267)
T cd06628         141 NKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLV-VEMLTGKHPFPDCT  216 (267)
T ss_pred             CCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHH-HHHhhCCCCCCCcc
Confidence            999999999998776542211     111223467789999999888899999999999999 99999999997653

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.94  E-value=2.1e-27  Score=172.69  Aligned_cols=147  Identities=24%  Similarity=0.427  Sum_probs=118.2

Q ss_pred             CeEEEEEec-CCCceEEEEecCCCChHHHhhCCCCC--------------------------------------------
Q 031436            1 MRLIGCCLE-TENPVLVFEYVEYGTLADRIYHPRQP--------------------------------------------   35 (159)
Q Consensus         1 v~l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~--------------------------------------------   35 (159)
                      |+++++|.. +...++++||+++++|.+.+......                                            
T Consensus        74 v~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (337)
T cd05054          74 VNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSL  153 (337)
T ss_pred             hheeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcch
Confidence            356777764 45678999999999999887643210                                            


Q ss_pred             ------------CCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecCCCcccCCCcce-
Q 031436           36 ------------NFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR-  102 (159)
Q Consensus        36 ------------~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-  102 (159)
                                  ...++++..+..++.|++.|+.|+|   +++++|||+||.||+++.+..++++|||++..+...... 
T Consensus       154 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~  230 (337)
T cd05054         154 SDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV  230 (337)
T ss_pred             hhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchh
Confidence                        0125788889999999999999999   899999999999999999999999999998765433221 


Q ss_pred             eeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccC
Q 031436          103 IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSE  151 (159)
Q Consensus       103 ~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~  151 (159)
                      ......++..|+|||.+.+..++.++|+|||||++ +++++ |..||.+.
T Consensus       231 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l-~el~t~g~~p~~~~  279 (337)
T cd05054         231 RKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLL-WEIFSLGASPYPGV  279 (337)
T ss_pred             hccCCCCCccccCcHHhcCCCCCccccHHHHHHHH-HHHHHcCCCCCCCC
Confidence            11223446679999999999999999999999999 99997 99999764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.94  E-value=2.8e-27  Score=167.86  Aligned_cols=147  Identities=29%  Similarity=0.408  Sum_probs=120.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCC----------CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEe
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ----------PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFR   70 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~----------~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~   70 (159)
                      +++++++.+++..++++||+++++|.+++.....          .....+++..+..++.|++.|+.|||   +.+++|+
T Consensus        70 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~  146 (280)
T cd05092          70 VRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHR  146 (280)
T ss_pred             ceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecc
Confidence            4678889888899999999999999998865421          01134778889999999999999999   8999999


Q ss_pred             cCCCCCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-ccccc
Q 031436           71 NVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWY  148 (159)
Q Consensus        71 ~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~  148 (159)
                      |++|+||+++.+..++++|||++........ .......++..|+|||.+.+..++.++|+||||+++ |++++ |+.||
T Consensus       147 dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~el~~~g~~p~  225 (280)
T cd05092         147 DLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVL-WEIFTYGKQPW  225 (280)
T ss_pred             cccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHH-HHHHcCCCCCC
Confidence            9999999999999999999998765433221 111222345679999999988899999999999999 99998 89998


Q ss_pred             ccC
Q 031436          149 RSE  151 (159)
Q Consensus       149 ~~~  151 (159)
                      ...
T Consensus       226 ~~~  228 (280)
T cd05092         226 YQL  228 (280)
T ss_pred             ccC
Confidence            654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.94  E-value=6.9e-28  Score=180.73  Aligned_cols=133  Identities=20%  Similarity=0.334  Sum_probs=107.4

Q ss_pred             CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCC-ceEEEec
Q 031436           12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQS-VAKLFDF   90 (159)
Q Consensus        12 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~-~~~l~d~   90 (159)
                      .++++|||++ +++.+.+..... ....+++..+..++.|++.||.|||   +.+++||||||+||+++.+. .+|++||
T Consensus       141 ~l~lvmE~~~-~~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~DF  215 (440)
T PTZ00036        141 FLNVVMEFIP-QTVHKYMKHYAR-NNHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCDF  215 (440)
T ss_pred             EEEEEEecCC-ccHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeeecc
Confidence            3568999996 578776653211 1156788889999999999999999   89999999999999998664 6999999


Q ss_pred             CCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCC
Q 031436           91 SYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      |++.........  ....++..|+|||.+.+. .++.++|+||+||++ |+|++|.+||.+.+
T Consensus       216 Gla~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil-~elltG~~pf~~~~  275 (440)
T PTZ00036        216 GSAKNLLAGQRS--VSYICSRFYRAPELMLGATNYTTHIDLWSLGCII-AEMILGYPIFSGQS  275 (440)
T ss_pred             ccchhccCCCCc--ccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHH-HHHHhCCCCCCCCC
Confidence            998766433221  224578889999998764 689999999999999 99999999998754

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.94  E-value=1.7e-27  Score=171.05  Aligned_cols=149  Identities=23%  Similarity=0.337  Sum_probs=120.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCC-----------CCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQP-----------NFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVF   69 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-----------~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h   69 (159)
                      ++++++|..++..++++||+++|+|.+++...+..           ....+++.++..++.|++.|++|+|   +++++|
T Consensus        87 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H  163 (307)
T cd05098          87 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIH  163 (307)
T ss_pred             eeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCccc
Confidence            46788999999999999999999999998754211           1134778888999999999999999   899999


Q ss_pred             ecCCCCCEEecCCCceEEEecCCCcccCCCcce-eeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccc
Q 031436           70 RNVKPSNILFQEQSVAKLFDFSYSESIPEGETR-IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAW  147 (159)
Q Consensus        70 ~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p  147 (159)
                      +|++|.||+++.+..++++|||.+......... .......+..|+|||.+.+..++.++|+||+|+++ |+|++ |..|
T Consensus       164 ~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l-~el~~~g~~p  242 (307)
T cd05098         164 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL-WEIFTLGGSP  242 (307)
T ss_pred             ccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHH-HHHHcCCCCC
Confidence            999999999999999999999987655432211 11112234579999999888899999999999999 99998 8899


Q ss_pred             cccCCC
Q 031436          148 YRSEDW  153 (159)
Q Consensus       148 ~~~~~~  153 (159)
                      |.+.+.
T Consensus       243 ~~~~~~  248 (307)
T cd05098         243 YPGVPV  248 (307)
T ss_pred             CCcCCH
Confidence            876543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.94  E-value=2.8e-27  Score=167.67  Aligned_cols=142  Identities=24%  Similarity=0.368  Sum_probs=116.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      ++++++|.. ...++++||+++|+|.+.+....    ..+++.....++.|++.|+.|+|   +++++|+||+|+||+++
T Consensus        72 ~~~~~~~~~-~~~~l~~~~~~~g~l~~~l~~~~----~~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~  143 (279)
T cd05109          72 CRLLGICLT-STVQLVTQLMPYGCLLDYVRENK----DRIGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVK  143 (279)
T ss_pred             ceEEEEEcC-CCcEEEEEcCCCCCHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEc
Confidence            356777764 55789999999999999886532    45788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCccee-eeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRI-RGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~  151 (159)
                      .+..++++|||++.......... ......+..|++||...+..++.++|+||||+++ |++++ |..||...
T Consensus       144 ~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l-~el~t~g~~p~~~~  215 (279)
T cd05109         144 SPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTV-WELMTFGAKPYDGI  215 (279)
T ss_pred             CCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHH-HHHHcCCCCCCCCC
Confidence            88899999999887664322211 1112235679999999888899999999999999 99887 99999764

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.94  E-value=5e-27  Score=167.41  Aligned_cols=143  Identities=20%  Similarity=0.254  Sum_probs=117.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+..++..+++|||+++++|...+....    ..+++..+..++.|++.++.+||   +.+++|+|++|.||+++
T Consensus        72 ~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~  144 (292)
T cd06644          72 VKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELD----RGLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLT  144 (292)
T ss_pred             eeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEc
Confidence            467888888899999999999999988765432    45788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccc-----cCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA-----TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~-----~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.++++|||.+......... .....++..|+|||.+.     ...++.++|+||||+++ |+|++|+.||...+
T Consensus       145 ~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il-~el~~g~~p~~~~~  219 (292)
T cd06644         145 LDGDIKLADFGVSAKNVKTLQR-RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITL-IEMAQIEPPHHELN  219 (292)
T ss_pred             CCCCEEEccCccceeccccccc-cceecCCccccCceeeccccccCCCCCchhhhHhHHHHH-HHHhcCCCCCcccc
Confidence            9999999999987654322211 12335678899999884     34468899999999999 99999999996643

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.94  E-value=2.8e-27  Score=167.58  Aligned_cols=148  Identities=26%  Similarity=0.355  Sum_probs=119.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCC--CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ--PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      +++++++.+....+++|||+++++|.+.+...+.  .....+++..+..++.|++.++.|||   +++++|+||+|+||+
T Consensus        72 ~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil  148 (277)
T cd05036          72 VRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCL  148 (277)
T ss_pred             eeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchheEE
Confidence            4678888888899999999999999998875432  12235788888999999999999999   899999999999999


Q ss_pred             ecCCC---ceEEEecCCCcccCCCcce-eeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           79 FQEQS---VAKLFDFSYSESIPEGETR-IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        79 ~~~~~---~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      ++.+.   .++++|||++......... .......+..|+|||.+.+..++.++|+||||+++ ++|++ |+.||++.+
T Consensus       149 ~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il-~el~~~g~~pf~~~~  226 (277)
T cd05036         149 LTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLL-WEIFSLGYMPYPGRT  226 (277)
T ss_pred             EeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHH-HHHHcCCCCCCCCCC
Confidence            97643   5899999988765322211 11122234679999999888899999999999999 99886 999998654

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=5e-28  Score=170.34  Aligned_cols=145  Identities=20%  Similarity=0.298  Sum_probs=126.9

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      -+..+|+..+.+++|.||.+||+|.-....+     ..++++....+..+|..++.|||   ++|++.||||..|+|++.
T Consensus       315 glhscfqtesrlffvieyv~ggdlmfhmqrq-----rklpeeharfys~ei~lal~flh---~rgiiyrdlkldnvllda  386 (593)
T KOG0695|consen  315 GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDA  386 (593)
T ss_pred             ehhhhhcccceEEEEEEEecCcceeeehhhh-----hcCcHHHhhhhhHHHHHHHHHHh---hcCeeeeeccccceEEcc
Confidence            3455677788999999999999998666544     56899999999999999999999   999999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCCccc
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWKPA  156 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~~~  156 (159)
                      .+++|+.|+|+++....+.. .++++.|++.|.|||.+.+..|..++|+|++|+++ +||+.|+.||.-..++.+
T Consensus       387 eghikltdygmcke~l~~gd-~tstfcgtpnyiapeilrgeeygfsvdwwalgvlm-femmagrspfdivgm~n~  459 (593)
T KOG0695|consen  387 EGHIKLTDYGMCKEGLGPGD-TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLM-FEMMAGRSPFDIVGMDNP  459 (593)
T ss_pred             CCceeecccchhhcCCCCCc-ccccccCCCcccchhhhcccccCceehHHHHHHHH-HHHHcCCCCcceecCCCc
Confidence            99999999999886554432 34678999999999999999999999999999999 999999999976655544

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.94  E-value=1.9e-27  Score=167.43  Aligned_cols=141  Identities=25%  Similarity=0.343  Sum_probs=118.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+..++..++++||+++++|.+.+...     ..+++.++..++.|++.++.|+|   +.+++|+|++|.||+++
T Consensus        69 i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~  140 (267)
T cd06645          69 VAYFGSYLRRDKLWICMEFCGGGSLQDIYHVT-----GPLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLT  140 (267)
T ss_pred             eeEEEEEEeCCEEEEEEeccCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEC
Confidence            46788888889999999999999999988654     45788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccc---cCCCCCCcceEeccccccCcceecccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA---TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~---~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .+..++++|||++........ ......++..|+|||.+.   ...++.++|+||+|+++ |++++|..||...
T Consensus       141 ~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il-~~l~~~~~p~~~~  212 (267)
T cd06645         141 DNGHVKLADFGVSAQITATIA-KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITA-IELAELQPPMFDL  212 (267)
T ss_pred             CCCCEEECcceeeeEccCccc-ccccccCcccccChhhhccccCCCCCchhhhHHHHHHH-HHHhcCCCCcccc
Confidence            999999999998765533221 122345778899999874   44578999999999999 9999999998543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.94  E-value=3.7e-27  Score=165.55  Aligned_cols=141  Identities=23%  Similarity=0.352  Sum_probs=121.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+.+++..++++||+++++|.+.+...     ..++...+..++.|++.++.++|   +++++|+|++|.||+++
T Consensus        56 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~  127 (262)
T cd05572          56 VKLYRTFKDKKYIYMLMEYCLGGELWTILRDR-----GLFDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLD  127 (262)
T ss_pred             eeeeeeEEcCCccEEEEecCCCCcHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEc
Confidence            46778888889999999999999999988654     34788888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||.+.......  ......++..|++||.+.+..++.++|+||+|+++ |++++|..||...+
T Consensus       128 ~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il-~~l~~g~~p~~~~~  196 (262)
T cd05572         128 SNGYVKLVDFGFAKKLKSGQ--KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILL-YELLTGRPPFGEDD  196 (262)
T ss_pred             CCCCEEEeeCCcccccCccc--ccccccCCcCccChhHhcCCCCCChhhhhhhHHHH-HHHHhCCCCcCCCC
Confidence            99999999999887665432  11223467789999999888899999999999999 99999999998765

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.94  E-value=2.5e-27  Score=166.31  Aligned_cols=143  Identities=25%  Similarity=0.348  Sum_probs=116.7

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++++.+. .+..+++|||+++++|.+.+.....   ..+++.....++.|++.++.|||   +.+++|+|++|.||+++.
T Consensus        65 ~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~  137 (260)
T cd05070          65 QLYAVVS-EEPIYIVTEYMSKGSLLDFLKDGEG---RALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGD  137 (260)
T ss_pred             EEEeEEC-CCCcEEEEEecCCCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeC
Confidence            4566664 4678999999999999998865322   45788889999999999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      +..++++|||.+...............++..|+|||...+..++.++|+||||+++ |++++ |..||.+.+
T Consensus       138 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~~l~~~g~~p~~~~~  208 (260)
T cd05070         138 GLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL-TELVTKGRVPYPGMN  208 (260)
T ss_pred             CceEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHH-HHHHhcCCCCCCCCC
Confidence            99999999998876543322211112345679999999888899999999999999 99998 899997654

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.94  E-value=2.7e-27  Score=167.58  Aligned_cols=138  Identities=22%  Similarity=0.341  Sum_probs=113.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++++|.+++..++||||+++|+|...+...+    ..+++.....++.|++.|+.|||   +++++|+||+|.||+++
T Consensus        79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~Nill~  151 (274)
T cd05076          79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEK----GRVPVAWKITVAQQLASALSYLE---DKNLVHGNVCAKNILLA  151 (274)
T ss_pred             eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---cCCccCCCCCcccEEEe
Confidence            578999999999999999999999988886532    45778888999999999999999   89999999999999997


Q ss_pred             CCC-------ceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcc-eecccccccC
Q 031436           81 EQS-------VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGH-LTGRAWYRSE  151 (159)
Q Consensus        81 ~~~-------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~-~~g~~p~~~~  151 (159)
                      +.+       .+++.|||.+........     ..++..|+|||.+.+ ..++.++|+||||+++ |++ ++|+.||...
T Consensus       152 ~~~~~~~~~~~~kl~d~g~~~~~~~~~~-----~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l-~el~~~g~~p~~~~  225 (274)
T cd05076         152 RLGLAEGTSPFIKLSDPGVSFTALSREE-----RVERIPWIAPECVPGGNSLSTAADKWSFGTTL-LEICFDGEVPLKER  225 (274)
T ss_pred             ccCcccCccceeeecCCccccccccccc-----cccCCcccCchhhcCCCCCCcHHHHHHHHHHH-HHHHhCCCCCcccc
Confidence            532       479999997654432211     235677999998865 5689999999999999 887 5799998764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.94  E-value=3.2e-27  Score=166.61  Aligned_cols=146  Identities=18%  Similarity=0.288  Sum_probs=114.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++.|.+....+++|||+++|+|.+.+...... ....+...+..++.|++.|+.|+|   +.+++|+|++|.||+++
T Consensus        58 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~  133 (268)
T cd05086          58 LQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWH-RRNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLT  133 (268)
T ss_pred             hheEEEecCCCccEEEEecCCCCcHHHHHHhhhcc-cccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEEc
Confidence            46889999889999999999999999988754221 134566677789999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCc-ceeeeeecccccccCcccccc-------CCCCCCcceEeccccccCccee-cccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYLPPEYIAT-------GDCNEKCDVYSFDGSRDSGHLT-GRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~ape~~~~-------~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~  151 (159)
                      .+..++++|||++....... ........++..|+|||.+..       ..++.++|+||||+++ |+|++ +..||...
T Consensus       134 ~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l-~el~~~~~~p~~~~  212 (268)
T cd05086         134 SDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTL-WELFENAAQPYSHL  212 (268)
T ss_pred             CCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHH-HHHHhCCCCCCCCC
Confidence            99999999999865432211 111122346778999998742       2457899999999999 99986 57788654

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.94  E-value=4e-27  Score=165.78  Aligned_cols=143  Identities=24%  Similarity=0.324  Sum_probs=119.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+.+++..++++||+++++|.+.+....    ..+++..+..++.|++.|+.+||   +++++|+|++|.||+++
T Consensus        68 ~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~  140 (266)
T cd05033          68 IRLEGVVTKSRPVMIITEYMENGSLDKFLREND----GKFTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVN  140 (266)
T ss_pred             ceEeEEEecCCceEEEEEcCCCCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEc
Confidence            467888888899999999999999999886542    35788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceee-eeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIR-GRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~-~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~  151 (159)
                      .+..++++|||++........... ....++..|+|||.+.+..++.++|+||||+++ +++++ |..||...
T Consensus       141 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l-~~l~~~g~~p~~~~  212 (266)
T cd05033         141 SNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVM-WEVMSYGERPYWDM  212 (266)
T ss_pred             CCCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHH-HHHHccCCCCCCCC
Confidence            999999999998876642221111 112234679999999988999999999999999 88887 99998643

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.94  E-value=1.4e-27  Score=175.13  Aligned_cols=128  Identities=23%  Similarity=0.324  Sum_probs=107.9

Q ss_pred             CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEec
Q 031436           11 ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF   90 (159)
Q Consensus        11 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~   90 (159)
                      ...++||||+. +++.+.+.       ..++...+..++.|++.|+.|||   +++++||||||+||+++.+..+|++||
T Consensus       102 ~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Df  170 (364)
T cd07875         102 QDVYIVMELMD-ANLCQVIQ-------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDF  170 (364)
T ss_pred             CeEEEEEeCCC-CCHHHHHH-------hcCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEeC
Confidence            35789999996 57877663       23667778889999999999999   899999999999999999999999999


Q ss_pred             CCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           91 SYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      |++........  .....++..|+|||.+.+..++.++|+||+||++ |+|++|+.||.+.+
T Consensus       171 G~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il-~ell~g~~pf~~~~  229 (364)
T cd07875         171 GLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM-GEMIKGGVLFPGTD  229 (364)
T ss_pred             CCccccCCCCc--ccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHH-HHHHhCCCCCCCCC
Confidence            99875533221  1234578889999999999999999999999999 99999999998754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.94  E-value=9.4e-28  Score=175.49  Aligned_cols=136  Identities=26%  Similarity=0.362  Sum_probs=110.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++++||+++|+|.+..         ...+..+..++.|++.|+.|||   +++++||||+|+||+++
T Consensus       135 v~~~~~~~~~~~~~lv~e~~~~~~L~~~~---------~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~  202 (353)
T PLN00034        135 VKCHDMFDHNGEIQVLLEFMDGGSLEGTH---------IADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLIN  202 (353)
T ss_pred             ceeeeEeccCCeEEEEEecCCCCcccccc---------cCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEc
Confidence            46788999899999999999999985422         2345667789999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-----CCCCCCcceEeccccccCcceeccccccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-----GDCNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-----~~~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      .+..+|++|||++........ ......++..|+|||.+..     ...+.++|+|||||++ |+|++|+.||..
T Consensus       203 ~~~~~kL~DfG~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil-~el~~g~~pf~~  275 (353)
T PLN00034        203 SAKNVKIADFGVSRILAQTMD-PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSI-LEFYLGRFPFGV  275 (353)
T ss_pred             CCCCEEEcccccceecccccc-cccccccCccccCccccccccccCcCCCcchhHHHHHHHH-HHHHhCCCCCCC
Confidence            999999999998876533221 1123457889999998743     2345689999999999 999999999974

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.94  E-value=6e-27  Score=179.88  Aligned_cols=149  Identities=23%  Similarity=0.320  Sum_probs=127.4

Q ss_pred             CeEEEEEec-----CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC
Q 031436            1 MRLIGCCLE-----TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS   75 (159)
Q Consensus         1 v~l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~   75 (159)
                      +.++|++..     ++.+|||||||.+||..|+++...+   ..+.++.+.-++++++.|+.+||   .+.++|||+|-.
T Consensus        79 ~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g---~rl~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~  152 (953)
T KOG0587|consen   79 ATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKG---NRLKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQ  152 (953)
T ss_pred             ceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcc---cchhhHHHHHHHHHHHHHHHHHh---hcceeeecccCc
Confidence            356777753     5689999999999999999988763   67889999999999999999999   899999999999


Q ss_pred             CEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-----CCCCCcceEeccccccCcceeccccccc
Q 031436           76 NILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-----DCNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        76 nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-----~~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      |||+..++.+|+.|||.+..+..-. ....+..|++.|||||++...     .|+..+|+||+|++. .||..|.+|+-.
T Consensus       153 NiLLT~e~~VKLvDFGvSaQldsT~-grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITa-IEladG~PPl~D  230 (953)
T KOG0587|consen  153 NVLLTENAEVKLVDFGVSAQLDSTV-GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITA-IEMAEGAPPLCD  230 (953)
T ss_pred             eEEEeccCcEEEeeeeeeeeeeccc-ccccCcCCCcccccceeeecccCCCCCcccccchhhcccee-ehhcCCCCCccC
Confidence            9999999999999999998775433 234567899999999998643     467889999999999 999999999987


Q ss_pred             CCCcccc
Q 031436          151 EDWKPAV  157 (159)
Q Consensus       151 ~~~~~~~  157 (159)
                      +.-.+.+
T Consensus       231 mHPmraL  237 (953)
T KOG0587|consen  231 MHPMRAL  237 (953)
T ss_pred             cchhhhh
Confidence            7655544

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.94  E-value=2e-27  Score=166.69  Aligned_cols=145  Identities=30%  Similarity=0.398  Sum_probs=120.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.++...++++||+++++|.+.+.....   ..++...+..++.|++.++.++|   +++++|+|++|.||+++
T Consensus        64 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~---~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~  137 (261)
T cd05034          64 VQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEG---KKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVG  137 (261)
T ss_pred             eeeeeeeecCCceEEEEeccCCCCHHHHHhcccc---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEc
Confidence            3677888888899999999999999998865422   45788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..++++|||.+................+..|+|||.+.+..++.++|+||+|+++ +++++ |+.||.+.+
T Consensus       138 ~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il-~~l~t~g~~p~~~~~  209 (261)
T cd05034         138 ENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILL-TEIVTYGRVPYPGMT  209 (261)
T ss_pred             CCCCEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHH-HHHHhCCCCCCCCCC
Confidence            999999999998776543221111112235679999999988899999999999999 99998 999997654

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.94  E-value=5.1e-27  Score=165.35  Aligned_cols=144  Identities=23%  Similarity=0.285  Sum_probs=119.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..+++|||+++++|.+.+....    ..++..++..++.|++.++.++|   +.+++|+|++|.|++++
T Consensus        68 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~  140 (267)
T cd05066          68 IHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHD----GQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVN  140 (267)
T ss_pred             ceEEEEEecCCccEEEEEcCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEEC
Confidence            468889988899999999999999999886532    35778888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeee--eecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRG--RVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~--~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..++++|||.+............  ....+..|++||.+.+..++.++|+||||+++ +++++ |..||...+
T Consensus       141 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l-~ell~~g~~p~~~~~  214 (267)
T cd05066         141 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVM-WEVMSYGERPYWEMS  214 (267)
T ss_pred             CCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHH-HHHhcCCCCCcccCC
Confidence            9999999999988766443322111  11123569999999888899999999999999 88775 999986643

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.94  E-value=2.9e-28  Score=170.05  Aligned_cols=141  Identities=23%  Similarity=0.345  Sum_probs=115.5

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      .|+..|+++.++|+|||-|.||+|.+++...     +.+.+.+...+..+|+.||++||   .+||.|||+||+|||-.+
T Consensus       140 qLiefFEdd~~FYLVfEKm~GGplLshI~~~-----~~F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~  211 (463)
T KOG0607|consen  140 QLIEFFEDDTRFYLVFEKMRGGPLLSHIQKR-----KHFNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCES  211 (463)
T ss_pred             HHHHHhcccceEEEEEecccCchHHHHHHHh-----hhccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecC
Confidence            4677889999999999999999999998765     56888889999999999999999   999999999999999854


Q ss_pred             C---CceEEEecCCCcccCCCcce------eeeeecccccccCccccc---c--CCCCCCcceEeccccccCcceecccc
Q 031436           82 Q---SVAKLFDFSYSESIPEGETR------IRGRVMGTFGYLPPEYIA---T--GDCNEKCDVYSFDGSRDSGHLTGRAW  147 (159)
Q Consensus        82 ~---~~~~l~d~~~~~~~~~~~~~------~~~~~~~~~~~~ape~~~---~--~~~~~~~DvwS~g~~~~~~~~~g~~p  147 (159)
                      .   ..+|++||.+...+..+...      ...+..|+..|||||+..   +  ..|+.++|.||+|+++ |.|++|.+|
T Consensus       212 pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIl-YImLsGYpP  290 (463)
T KOG0607|consen  212 PNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVIL-YIMLSGYPP  290 (463)
T ss_pred             CCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHH-HHHHhCCCC
Confidence            3   34799999876544322211      112345778899999863   2  2478999999999999 999999999


Q ss_pred             cccC
Q 031436          148 YRSE  151 (159)
Q Consensus       148 ~~~~  151 (159)
                      |.+.
T Consensus       291 FvG~  294 (463)
T KOG0607|consen  291 FVGH  294 (463)
T ss_pred             ccCc
Confidence            9886

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.94  E-value=2.9e-27  Score=165.44  Aligned_cols=144  Identities=22%  Similarity=0.342  Sum_probs=122.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+.+.+++++||+++++|.+.+.....   ..+++..+..++.|++.++.++|   +.+++|+|++|.||+++
T Consensus        62 ~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~  135 (256)
T cd08221          62 IAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKG---QLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLT  135 (256)
T ss_pred             eEEEeEEecCCeEEEEEEecCCCcHHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEe
Confidence            4678899998999999999999999998875422   45788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..+|++|||.+........ ......++..|+|||.+.+..++.++|+||||+++ +++++|..||...+
T Consensus       136 ~~~~~kl~d~~~~~~~~~~~~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~-~~l~~g~~~~~~~~  205 (256)
T cd08221         136 KAGLIKLGDFGISKILGSEYS-MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVL-YELLTLKRTFDATN  205 (256)
T ss_pred             CCCCEEECcCcceEEcccccc-cccccCCCccccCHhhcCCCCCCCcchhHHHHHHH-HHHHHCCCCCCCCC
Confidence            999999999998766543331 12234567889999999888899999999999999 99999999997643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.94  E-value=2.9e-27  Score=165.20  Aligned_cols=144  Identities=24%  Similarity=0.350  Sum_probs=117.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      ++++++|.+.+..++++||+++++|.+.+....    ..+++.....++.|++.++.|||   +++++|+|++|.||+++
T Consensus        56 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~  128 (252)
T cd05084          56 VRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG----PRLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVT  128 (252)
T ss_pred             ceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEc
Confidence            467889999999999999999999999886432    35778888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceee-eeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIR-GRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~-~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..++++|||.+........... .....+..|+|||.+.+..++.++|+||+|+++ |++++ |..||...+
T Consensus       129 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il-~e~~~~~~~p~~~~~  201 (252)
T cd05084         129 EKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILL-WEAFSLGAVPYANLS  201 (252)
T ss_pred             CCCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHH-HHHHhCCCCCccccC
Confidence            999999999998765432211100 111224569999999888899999999999999 99887 889986543

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.94  E-value=5.2e-27  Score=166.28  Aligned_cols=144  Identities=22%  Similarity=0.357  Sum_probs=119.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      ++++++|.. ...++++||+++|+|.+.+....    ..+++..+..++.|++.|+.|||   +++++|+|++|.||+++
T Consensus        72 ~~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~  143 (279)
T cd05057          72 VRLLGICLS-SQVQLITQLMPLGCLLDYVRNHK----DNIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVK  143 (279)
T ss_pred             ceEEEEEec-CceEEEEecCCCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEc
Confidence            467888876 78899999999999999987543    34788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceee-eeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIR-GRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~-~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~  153 (159)
                      .+..++++|||.+........... .....+..|++||......++.++|+||||+++ +++++ |+.||.+...
T Consensus       144 ~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l-~el~~~g~~p~~~~~~  217 (279)
T cd05057         144 TPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTV-WELMTFGAKPYEGIPA  217 (279)
T ss_pred             CCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHH-HHHhcCCCCCCCCCCH
Confidence            989999999998876543322111 111224579999999888899999999999999 99998 9999987543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.94  E-value=3.8e-27  Score=165.45  Aligned_cols=143  Identities=25%  Similarity=0.322  Sum_probs=116.1

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++++++. .+..+++|||+.+++|.+.+.....   ..+++..+..++.|++.|+.|||   +.+++|+|++|.|+++++
T Consensus        65 ~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~  137 (260)
T cd05069          65 PLYAVVS-EEPIYIVTEFMGKGSLLDFLKEGDG---KYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGD  137 (260)
T ss_pred             eEEEEEc-CCCcEEEEEcCCCCCHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcC
Confidence            4566664 4678999999999999998865321   44678888899999999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      +..++++|||.+...............++..|+|||...+..++.++|+||||+++ |++++ |+.||.+..
T Consensus       138 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l-~el~t~g~~p~~~~~  208 (260)
T cd05069         138 NLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL-TELVTKGRVPYPGMV  208 (260)
T ss_pred             CCeEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHH-HHHHhCCCCCCCCCC
Confidence            99999999998865533222111112345679999999888899999999999999 99998 899997653

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.94  E-value=4.9e-27  Score=164.79  Aligned_cols=143  Identities=28%  Similarity=0.405  Sum_probs=117.2

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++++++ .++..++++||+++++|.+.+.....   ..++..+...++.|++.++.+||   +.+++|+|++|.|++++.
T Consensus        65 ~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~---~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~  137 (260)
T cd05067          65 RLYAVV-TQEPIYIITEYMENGSLVDFLKTPEG---IKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSE  137 (260)
T ss_pred             eEEEEE-ccCCcEEEEEcCCCCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcC
Confidence            456665 45678999999999999998865432   45788888899999999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      +..++++|||.+...............++..|+|||.+....++.++|+||||+++ +++++ |+.||.+.+
T Consensus       138 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l-~el~~~g~~p~~~~~  208 (260)
T cd05067         138 TLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL-TEIVTYGRIPYPGMT  208 (260)
T ss_pred             CCCEEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHH-HHHHhCCCCCCCCCC
Confidence            99999999998876543222211222345679999999888899999999999999 99998 999997654

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.94  E-value=3.4e-27  Score=165.13  Aligned_cols=144  Identities=18%  Similarity=0.287  Sum_probs=118.6

Q ss_pred             eEEEEEec-CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            2 RLIGCCLE-TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         2 ~l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      ++++.+.. ++.+++++||+++++|.+.+.....   ..+++.++..++.|++.++.++|   +.+++|+|++|+||+++
T Consensus        63 ~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~---~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~  136 (257)
T cd08223          63 AYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKG---KLLPENQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLT  136 (257)
T ss_pred             eeeeeecCCCCEEEEEecccCCCcHHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEe
Confidence            45555543 4457899999999999998875322   45788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+..++++|||.+........ ......++..|+|||.+.+..++.++|+||+|+++ +++++|+.||...+.
T Consensus       137 ~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il-~~l~~g~~~~~~~~~  207 (257)
T cd08223         137 RTNIIKVGDLGIARVLENQCD-MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCV-YEMATLKHAFNAKDM  207 (257)
T ss_pred             cCCcEEEecccceEEecccCC-ccccccCCcCccChhHhcCCCCCchhhhHHHHHHH-HHHHcCCCCCCCCCH
Confidence            999999999998766543222 12233567789999999988899999999999999 999999999987553

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.94  E-value=4.6e-27  Score=165.78  Aligned_cols=143  Identities=20%  Similarity=0.284  Sum_probs=117.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+ +..+++|||+++|+|.+.+....    ..+++..+..++.|++.++.++|   +.+++|+|++|.||+++
T Consensus        70 ~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~  141 (270)
T cd05056          70 VKLIGVITE-NPVWIVMELAPLGELRSYLQVNK----YSLDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVS  141 (270)
T ss_pred             hceeEEEcC-CCcEEEEEcCCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEe
Confidence            467777765 66789999999999999986532    35788888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..++++|||++................+..|+|||.+....++.++|+||||+++ +++++ |+.||...+
T Consensus       142 ~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~el~~~g~~pf~~~~  213 (270)
T cd05056         142 SPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM-WEILMLGVKPFQGVK  213 (270)
T ss_pred             cCCCeEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHH-HHHHHcCCCCCCCCC
Confidence            999999999998776544322222222334679999999888899999999999999 88775 999997654

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=3.3e-27  Score=167.31  Aligned_cols=143  Identities=19%  Similarity=0.253  Sum_probs=119.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+..+...+++|||+++++|.+.+....    ..+++..+..++.|++.++.|+|   +++++|+|++|+||+++
T Consensus        65 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~  137 (280)
T cd06611          65 VGLYEAYFYENKLWILIEFCDGGALDSIMLELE----RGLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLT  137 (280)
T ss_pred             eEEEEEEecCCeEEEEeeccCCCcHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEC
Confidence            468889999999999999999999999886532    45888999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccc-----cCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA-----TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~-----~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||.+......... .....++..|++||.+.     ...++.++|+||||+++ |++++|+.||...+
T Consensus       138 ~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il-~~l~~g~~p~~~~~  212 (280)
T cd06611         138 LDGDVKLADFGVSAKNKSTLQK-RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITL-IELAQMEPPHHELN  212 (280)
T ss_pred             CCCCEEEccCccchhhcccccc-cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHH-HHHHhCCCCcccCC
Confidence            9999999999987654332221 12234677899999874     34578899999999999 99999999997654

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.94  E-value=3.7e-27  Score=167.96  Aligned_cols=148  Identities=24%  Similarity=0.352  Sum_probs=120.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCC-------------------CCCccchhhHHHHHHHHHHHHHHhhh
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQP-------------------NFEPVTCSLRLKIAMEIAYGIAYLHV   61 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-------------------~~~~~~~~~~~~~~~~i~~~l~~lh~   61 (159)
                      |++++.|.+++..++++||+.+++|.+.+...+..                   ....+++..+..++.|++.++.+|| 
T Consensus        66 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-  144 (290)
T cd05045          66 IKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA-  144 (290)
T ss_pred             eeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH-
Confidence            57889999999999999999999999987643211                   1134677888999999999999999 


Q ss_pred             cCCCCeEEecCCCCCEEecCCCceEEEecCCCcccCCCcce-eeeeecccccccCccccccCCCCCCcceEeccccccCc
Q 031436           62 AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR-IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSG  140 (159)
Q Consensus        62 ~~~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~  140 (159)
                        +.+++|+|++|.||+++.+..++++|||++......... ......++..|+|||...+..++.++|+||||+++ ++
T Consensus       145 --~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l-~e  221 (290)
T cd05045         145 --EMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL-WE  221 (290)
T ss_pred             --HCCeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHH-HH
Confidence              899999999999999999999999999988655332211 11222345679999999888899999999999999 99


Q ss_pred             cee-cccccccCC
Q 031436          141 HLT-GRAWYRSED  152 (159)
Q Consensus       141 ~~~-g~~p~~~~~  152 (159)
                      |++ |..||++.+
T Consensus       222 l~t~g~~p~~~~~  234 (290)
T cd05045         222 IVTLGGNPYPGIA  234 (290)
T ss_pred             HHhcCCCCCCCCC
Confidence            998 999997654

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.94  E-value=7.8e-27  Score=166.77  Aligned_cols=147  Identities=26%  Similarity=0.409  Sum_probs=118.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCC------CCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQP------NFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      +++++++.+++..+++|||+++++|.+.+......      ....+++..+..++.|++.|+.+||   +.+++|+|++|
T Consensus        82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dlkp  158 (296)
T cd05095          82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDLAT  158 (296)
T ss_pred             ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCh
Confidence            46788998889999999999999999988654321      1134667788999999999999999   89999999999


Q ss_pred             CCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee--cccccccC
Q 031436           75 SNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT--GRAWYRSE  151 (159)
Q Consensus        75 ~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~--g~~p~~~~  151 (159)
                      .||+++.+..++++|||++........ ........+..|++||...+..++.++|+||||+++ |++++  |..||...
T Consensus       159 ~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l-~el~~~~~~~p~~~~  237 (296)
T cd05095         159 RNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTL-WEILTLCKEQPYSQL  237 (296)
T ss_pred             heEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHH-HHHHHhCCCCCcccc
Confidence            999999999999999998875533221 111222345679999998888899999999999999 99998  67888654

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.94  E-value=4.5e-27  Score=165.57  Aligned_cols=144  Identities=22%  Similarity=0.287  Sum_probs=118.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++.+++.+.+..+++|||+++++|.+.+....    ..+++.....++.|++.|+.++|   +.+++|+|++|.||+++
T Consensus        69 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~  141 (268)
T cd05063          69 IRLEGVVTKFKPAMIITEYMENGALDKYLRDHD----GEFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVN  141 (268)
T ss_pred             eEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEc
Confidence            467888998899999999999999999886532    35788888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceee--eeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIR--GRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~--~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..++++|||++...........  .....+..|+|||.+.+..++.++|+||||+++ |++++ |+.||...+
T Consensus       142 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il-~ell~~g~~p~~~~~  215 (268)
T cd05063         142 SNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVM-WEVMSFGERPYWDMS  215 (268)
T ss_pred             CCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHH-HHHHhCCCCCCCcCC
Confidence            999999999998775543222111  111223469999999888899999999999999 99887 999996543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.94  E-value=3.9e-27  Score=168.99  Aligned_cols=143  Identities=23%  Similarity=0.289  Sum_probs=118.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+..++..++++||+++++|.+.+...     ..+++.....++.|++.|+.|+|   +++++|+|++|.||+++
T Consensus        64 ~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~  135 (305)
T cd05609          64 VSMFCSFETKRHLCMVMEYVEGGDCATLLKNI-----GALPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLIT  135 (305)
T ss_pred             eeeEEEEecCCEEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEEC
Confidence            46788888888999999999999999998654     35788888889999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCc--------------ceeeeeecccccccCccccccCCCCCCcceEeccccccCcceeccc
Q 031436           81 EQSVAKLFDFSYSESIPEGE--------------TRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRA  146 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~--------------~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~  146 (159)
                      .++.++++|||.++......              ........++..|+|||.+....++.++|+||||+++ |++++|..
T Consensus       136 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl-~el~~g~~  214 (305)
T cd05609         136 SMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIIL-YEFLVGCV  214 (305)
T ss_pred             CCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHH-HHHHhCCC
Confidence            99999999999875311000              0001122456789999999888899999999999999 99999999


Q ss_pred             ccccCC
Q 031436          147 WYRSED  152 (159)
Q Consensus       147 p~~~~~  152 (159)
                      ||.+.+
T Consensus       215 pf~~~~  220 (305)
T cd05609         215 PFFGDT  220 (305)
T ss_pred             CCCCCC
Confidence            997654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.94  E-value=1.5e-27  Score=174.49  Aligned_cols=138  Identities=22%  Similarity=0.306  Sum_probs=113.5

Q ss_pred             CeEEEEEecC------CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCLET------ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~~------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      |++++++...      ...+++|||+. +++.+.+.       ..++...+..++.|++.|+.|||   +++++||||||
T Consensus        79 v~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~-------~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp  147 (355)
T cd07874          79 ISLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ-------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP  147 (355)
T ss_pred             hceeeeeeccccccccceeEEEhhhhc-ccHHHHHh-------hcCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCh
Confidence            3566766543      34689999996 57777663       23677788889999999999999   89999999999


Q ss_pred             CCEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           75 SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        75 ~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +||+++.+..+|++|||++........  .....++..|+|||.+.+..++.++|+||||+++ |+|++|+.||.+.+
T Consensus       148 ~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il-~el~~g~~pf~~~~  222 (355)
T cd07874         148 SNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM-GEMVRHKILFPGRD  222 (355)
T ss_pred             HHEEECCCCCEEEeeCcccccCCCccc--cCCccccCCccCHHHHcCCCCCchhhHHHHHHHH-HHHHhCCCCCCCCC
Confidence            999999999999999999875533221  1234578899999999998999999999999999 99999999998765

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.94  E-value=3.9e-27  Score=170.99  Aligned_cols=149  Identities=22%  Similarity=0.311  Sum_probs=120.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCC-----------CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ-----------PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVF   69 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-----------~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h   69 (159)
                      |++++.|.+++..++++||+++|+|.+.+.....           .....+++..+..++.|++.|+.|||   +++++|
T Consensus        81 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~givH  157 (334)
T cd05100          81 INLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---SQKCIH  157 (334)
T ss_pred             eeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCeec
Confidence            4678899998999999999999999998865321           11234677888899999999999999   899999


Q ss_pred             ecCCCCCEEecCCCceEEEecCCCcccCCCccee-eeeecccccccCccccccCCCCCCcceEeccccccCccee-cccc
Q 031436           70 RNVKPSNILFQEQSVAKLFDFSYSESIPEGETRI-RGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAW  147 (159)
Q Consensus        70 ~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p  147 (159)
                      +|++|.||+++.+..++++|||++.......... .....++..|+|||.+.+..++.++|+||||+++ |+|++ |..|
T Consensus       158 ~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~el~~~g~~p  236 (334)
T cd05100         158 RDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLL-WEIFTLGGSP  236 (334)
T ss_pred             cccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHH-HHHHhcCCCC
Confidence            9999999999999999999999887554322111 1112234569999999988899999999999999 99998 8899


Q ss_pred             cccCCC
Q 031436          148 YRSEDW  153 (159)
Q Consensus       148 ~~~~~~  153 (159)
                      |.+.+.
T Consensus       237 ~~~~~~  242 (334)
T cd05100         237 YPGIPV  242 (334)
T ss_pred             CCCCCH
Confidence            877543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.94  E-value=4.5e-27  Score=164.46  Aligned_cols=148  Identities=30%  Similarity=0.429  Sum_probs=122.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCC----CCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCC
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQP----NFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSN   76 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~n   76 (159)
                      +++++++..+...++++||+++++|.+.+......    ....+++..+..++.|++.|+.+||   +++++|+|++|.|
T Consensus        59 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~n  135 (262)
T cd00192          59 VRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARN  135 (262)
T ss_pred             heeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcce
Confidence            46788888888999999999999999998764211    1256889999999999999999999   8999999999999


Q ss_pred             EEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           77 ILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        77 il~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      |+++.+..++++|||.+........ .......++..|+|||......++.++|+||+|+++ +++++ |..||...+
T Consensus       136 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~~g~~p~~~~~  212 (262)
T cd00192         136 CLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLL-WEIFTLGATPYPGLS  212 (262)
T ss_pred             EEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHH-HHHHhcCCCCCCCCC
Confidence            9999999999999998876644321 111223456789999999888899999999999999 99988 699998764

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.94  E-value=3.1e-27  Score=165.13  Aligned_cols=143  Identities=27%  Similarity=0.413  Sum_probs=122.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+..+...++++||+++++|.+.+....    ..+++..+..++.|++.++.+||   +.+++|+|++|.||+++
T Consensus        61 ~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~----~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~  133 (256)
T cd06612          61 VKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITN----KTLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLN  133 (256)
T ss_pred             eeeeeeeecCCcEEEEEecCCCCcHHHHHHhCc----cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEC
Confidence            467888988899999999999999999886432    45788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..+++.|||.+......... .....++..|++||.+.+..++.++|+||||+++ ++|++|+.||...+
T Consensus       134 ~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il-~~l~~g~~p~~~~~  203 (256)
T cd06612         134 EEGQAKLADFGVSGQLTDTMAK-RNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITA-IEMAEGKPPYSDIH  203 (256)
T ss_pred             CCCcEEEcccccchhcccCccc-cccccCCccccCHHHHhcCCCCchhhHHHHHHHH-HHHHhCCCCCCCcc
Confidence            9999999999988766443221 1223467789999999888899999999999999 99999999997654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.94  E-value=6.2e-27  Score=165.14  Aligned_cols=148  Identities=26%  Similarity=0.396  Sum_probs=117.6

Q ss_pred             CeEEEEEecC------CCceEEEEecCCCChHHHhhCCC-CCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCC
Q 031436            1 MRLIGCCLET------ENPVLVFEYVEYGTLADRIYHPR-QPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK   73 (159)
Q Consensus         1 v~l~~~~~~~------~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~   73 (159)
                      +++++.|.+.      ...++++||+++|+|.+.+...+ ......+++..+..++.|++.|+.|||   +++++|+|+|
T Consensus        63 v~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk  139 (272)
T cd05075          63 MRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLA  139 (272)
T ss_pred             ceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccc
Confidence            4677777532      24689999999999988764322 122345788889999999999999999   8999999999


Q ss_pred             CCCEEecCCCceEEEecCCCcccCCCccee-eeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccC
Q 031436           74 PSNILFQEQSVAKLFDFSYSESIPEGETRI-RGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSE  151 (159)
Q Consensus        74 ~~nil~~~~~~~~l~d~~~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~  151 (159)
                      |+||+++.+..++++|||++.......... ......+..|++||...+..++.++|+||||+++ |++++ |+.||.+.
T Consensus       140 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il-~el~~~g~~p~~~~  218 (272)
T cd05075         140 ARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTM-WEIATRGQTPYPGV  218 (272)
T ss_pred             hhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHH-HHHHcCCCCCCCCC
Confidence            999999999999999999987654332211 1122346679999999988899999999999999 99988 89999765


Q ss_pred             C
Q 031436          152 D  152 (159)
Q Consensus       152 ~  152 (159)
                      +
T Consensus       219 ~  219 (272)
T cd05075         219 E  219 (272)
T ss_pred             C
Confidence            3

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.94  E-value=7.3e-27  Score=164.68  Aligned_cols=148  Identities=24%  Similarity=0.393  Sum_probs=117.9

Q ss_pred             CeEEEEEecCCC------ceEEEEecCCCChHHHhhCCCC-CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCC
Q 031436            1 MRLIGCCLETEN------PVLVFEYVEYGTLADRIYHPRQ-PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK   73 (159)
Q Consensus         1 v~l~~~~~~~~~------~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~   73 (159)
                      +++++++.+...      .++++||+++|+|...+...+. .....+++..+..++.|++.|+.|+|   +++++|+|++
T Consensus        64 v~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlk  140 (273)
T cd05035          64 MKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLA  140 (273)
T ss_pred             eeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccc
Confidence            467777765444      7899999999999988754321 12245788889999999999999999   8999999999


Q ss_pred             CCCEEecCCCceEEEecCCCcccCCCccee-eeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccC
Q 031436           74 PSNILFQEQSVAKLFDFSYSESIPEGETRI-RGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSE  151 (159)
Q Consensus        74 ~~nil~~~~~~~~l~d~~~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~  151 (159)
                      |+||+++++..++++|||.+.......... ......+..|+|||.+.+..++.++|+||||+++ |++++ |..||.+.
T Consensus       141 p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il-~el~~~g~~p~~~~  219 (273)
T cd05035         141 ARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTM-WEIATRGQTPYPGV  219 (273)
T ss_pred             hheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHH-HHHHhCCCCCCCCC
Confidence            999999999999999999887654332111 1112235679999999888899999999999999 99998 89999764


Q ss_pred             C
Q 031436          152 D  152 (159)
Q Consensus       152 ~  152 (159)
                      +
T Consensus       220 ~  220 (273)
T cd05035         220 E  220 (273)
T ss_pred             C
Confidence            4

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.94  E-value=4.4e-27  Score=165.30  Aligned_cols=146  Identities=21%  Similarity=0.315  Sum_probs=121.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+.+++..++++||+++++|.+.+..... ....++..++..++.+++.++.+||   +.+++|+|++|+||+++
T Consensus        65 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~  140 (267)
T cd08224          65 IKYLASFIENNELNIVLELADAGDLSRMIKHFKK-QKRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFIT  140 (267)
T ss_pred             eeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcc-cCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEEC
Confidence            3567888888899999999999999998865322 1145788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.++++|||.+......... .....++..|+|||.+.+..++.++|+||||+++ +++++|+.||...+
T Consensus       141 ~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il-~~l~~g~~p~~~~~  210 (267)
T cd08224         141 ATGVVKLGDLGLGRFFSSKTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL-YEMAALQSPFYGDK  210 (267)
T ss_pred             CCCcEEEeccceeeeccCCCcc-cceecCCccccCHHHhccCCCCchhcHHHHHHHH-HHHHHCCCCcccCC
Confidence            9999999999987655432211 1223467789999999888899999999999999 99999999996543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.94  E-value=5.5e-27  Score=166.48  Aligned_cols=141  Identities=27%  Similarity=0.439  Sum_probs=115.5

Q ss_pred             CeEEEEEecC--CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLET--ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      ++++++|...  ...+++|||+++++|.+.+..      ..+++..+..++.|++.|+.+||   +++++|+||+|.||+
T Consensus        69 ~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~------~~l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nil  139 (283)
T cd05080          69 VKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPK------HKLNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVL  139 (283)
T ss_pred             eeEEEEEecCCCceEEEEecCCCCCCHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEE
Confidence            3567777653  357899999999999998864      34788999999999999999999   899999999999999


Q ss_pred             ecCCCceEEEecCCCcccCCCcce--eeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           79 FQEQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        79 ~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      ++.+..++++|||++.........  ......++..|++||.+.+..++.++|+||||+++ ++|++|..||...
T Consensus       140 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l-~el~tg~~p~~~~  213 (283)
T cd05080         140 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTL-YELLTHCDSKQSP  213 (283)
T ss_pred             EcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHH-HHHHhCCCCCCCC
Confidence            999999999999988765432211  11112345569999999888899999999999999 9999999998653

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.94  E-value=2.9e-27  Score=168.42  Aligned_cols=149  Identities=23%  Similarity=0.347  Sum_probs=119.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCC-----CCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQP-----NFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS   75 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~   75 (159)
                      +++++++.+++..+++|||+++|+|.+.+......     .....+...+..++.|++.|+.|||   +++++|+|++|+
T Consensus        72 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dikp~  148 (288)
T cd05061          72 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAAR  148 (288)
T ss_pred             eeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCCChh
Confidence            46788998889999999999999999998753211     1123455677889999999999999   899999999999


Q ss_pred             CEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCC
Q 031436           76 NILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDW  153 (159)
Q Consensus        76 nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~  153 (159)
                      ||+++.+..++++|||++........ .......++..|+|||.+.+..++.++|+||||+++ |++++ |..||.+.+.
T Consensus       149 nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l-~el~~~~~~p~~~~~~  227 (288)
T cd05061         149 NCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL-WEITSLAEQPYQGLSN  227 (288)
T ss_pred             eEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHH-HHHHhCCCCCCCCCCH
Confidence            99999999999999998775433221 111222345679999999888899999999999999 99998 7889876543

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.94  E-value=7.5e-27  Score=166.61  Aligned_cols=147  Identities=26%  Similarity=0.376  Sum_probs=120.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCC------CCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPN------FEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~------~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      ++++++|..++..++++|++++++|.+.+.......      ...+++..+..++.|++.|+.|||   +.+++|+|++|
T Consensus        82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH---~~~i~H~dlkp  158 (296)
T cd05051          82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE---SLNFVHRDLAT  158 (296)
T ss_pred             eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH---HcCccccccch
Confidence            467888988899999999999999999887543211      136788899999999999999999   89999999999


Q ss_pred             CCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee--cccccccC
Q 031436           75 SNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT--GRAWYRSE  151 (159)
Q Consensus        75 ~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~--g~~p~~~~  151 (159)
                      .||+++.+..++++|||.+........ .......++..|+|||.+.+..++.++|+||||+++ |++++  +..||...
T Consensus       159 ~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l-~el~~~~~~~p~~~~  237 (296)
T cd05051         159 RNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTL-WEILTLCREQPYEHL  237 (296)
T ss_pred             hceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHH-HHHHhcCCCCCCCCc
Confidence            999999999999999998775533221 112233456689999999888899999999999999 99887  67777654

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.94  E-value=1.1e-27  Score=171.05  Aligned_cols=140  Identities=21%  Similarity=0.390  Sum_probs=117.7

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++++.+..++..++++||+++++|.+.+..      ..+++..+..++.|++.++.|+|   +.+++|+||+|.||+++.
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~------~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~  153 (292)
T cd06658          83 DMYNSYLVGDELWVVMEFLEGGALTDIVTH------TRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTS  153 (292)
T ss_pred             HHHHheecCCeEEEEEeCCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcC
Confidence            345667778889999999999999887743      34678888999999999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +..++++|||++......... .....++..|+|||...+..++.++|+||||+++ +++++|+.||...+
T Consensus       154 ~~~~kL~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil-~el~~g~~p~~~~~  222 (292)
T cd06658         154 DGRIKLSDFGFCAQVSKEVPK-RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMV-IEMIDGEPPYFNEP  222 (292)
T ss_pred             CCCEEEccCcchhhccccccc-CceeecCccccCHHHHccCCCCchhhHHHHHHHH-HHHHhCCCCCCCCC
Confidence            999999999987654332221 1224567889999999888899999999999999 99999999997654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.94  E-value=3.3e-27  Score=167.21  Aligned_cols=141  Identities=24%  Similarity=0.375  Sum_probs=120.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..++++||+++++|.+.+..      .+++......++.|++.++.++|   +++++|+||+|.||+++
T Consensus        65 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~------~~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~  135 (277)
T cd06640          65 TKYYGSYLKGTKLWIIMEYLGGGSALDLLRA------GPFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLS  135 (277)
T ss_pred             eeEEEEEEECCEEEEEEecCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEc
Confidence            4678889988999999999999999998854      34677888889999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||++......... .....++..|+|||.+.+..++.++|+||||+++ |++++|..||...+
T Consensus       136 ~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il-~el~tg~~p~~~~~  205 (277)
T cd06640         136 EQGDVKLADFGVAGQLTDTQIK-RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITA-IELAKGEPPNSDMH  205 (277)
T ss_pred             CCCCEEEcccccceeccCCccc-cccccCcccccCHhHhccCCCccHHHHHHHHHHH-HHHHHCCCCCCCcC
Confidence            9999999999988765433221 1223467789999999888899999999999999 99999999997654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.94  E-value=4.2e-27  Score=169.41  Aligned_cols=146  Identities=23%  Similarity=0.324  Sum_probs=112.9

Q ss_pred             CeEEEEEec--CCCceEEEEecCCCChHHHhhCCCC----CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCLE--TENPVLVFEYVEYGTLADRIYHPRQ----PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      |++++++..  +...++++||+. ++|.+.+.....    .....+++..+..++.|++.|+.|||   +.+++||||||
T Consensus        61 v~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp  136 (317)
T cd07867          61 IALQKVFLSHSDRKVWLLFDYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKP  136 (317)
T ss_pred             eeEEEEEeccCCCeEEEEEeeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCH
Confidence            456777743  456789999996 588877653211    11235778888899999999999999   89999999999


Q ss_pred             CCEEe----cCCCceEEEecCCCcccCCCcce--eeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccc
Q 031436           75 SNILF----QEQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAW  147 (159)
Q Consensus        75 ~nil~----~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p  147 (159)
                      +||++    +.++.+|++|||++.........  ......++..|+|||.+.+. .++.++|+||+|+++ |+|++|++|
T Consensus       137 ~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il-~el~tg~~~  215 (317)
T cd07867         137 ANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIF-AELLTSEPI  215 (317)
T ss_pred             HHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHH-HHHHhCCCC
Confidence            99999    44568999999998765432211  11234567889999998764 578999999999999 999999999


Q ss_pred             cccC
Q 031436          148 YRSE  151 (159)
Q Consensus       148 ~~~~  151 (159)
                      |...
T Consensus       216 f~~~  219 (317)
T cd07867         216 FHCR  219 (317)
T ss_pred             cccc
Confidence            9754

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.94  E-value=3.5e-27  Score=167.05  Aligned_cols=144  Identities=22%  Similarity=0.363  Sum_probs=121.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++..++..++++||+++++|.+.+.....   ..+++..+..++.|++.++.++|   +++++|+||+|.||+++
T Consensus        56 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~  129 (277)
T cd05577          56 VSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGE---PGFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLD  129 (277)
T ss_pred             eeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCc---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEC
Confidence            4567888888899999999999999998865432   35788888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.++++|||.+........  .....++..|++||.+.+..++.++|+||+|+++ +++++|+.||...+.
T Consensus       130 ~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il-~~l~~g~~p~~~~~~  199 (277)
T cd05577         130 DHGNVRISDLGLAVELKGGKK--IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTL-YEMIAGRSPFRQRKE  199 (277)
T ss_pred             CCCCEEEccCcchhhhccCCc--cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHH-HHHhhCCCCCCCCcc
Confidence            999999999998765433211  1123456789999999888899999999999999 999999999976543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=4.9e-27  Score=164.66  Aligned_cols=143  Identities=25%  Similarity=0.354  Sum_probs=120.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+.+++.++++|||+++++|.+.+...+    ..++...+..++.|++.++.|||   +++++|+|++|.||+++
T Consensus        63 ~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~  135 (262)
T cd06613          63 VAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTR----GPLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLT  135 (262)
T ss_pred             hceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEEC
Confidence            467888888899999999999999999886542    35778888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC---CCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG---DCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~---~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||.+......... .....++..|+|||.....   .++.++|+||||+++ ++|++|+.||...+
T Consensus       136 ~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l-~~~~tg~~p~~~~~  208 (262)
T cd06613         136 EDGDVKLADFGVSAQLTATIAK-RKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITA-IELAELQPPMFDLH  208 (262)
T ss_pred             CCCCEEECccccchhhhhhhhc-cccccCCccccCchhhcccccCCcCchhhhHHHHHHH-HHHHhCCCCCCCCC
Confidence            9999999999987655432211 1223567789999998776   788999999999999 99999999997654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.94  E-value=1.5e-27  Score=165.57  Aligned_cols=137  Identities=23%  Similarity=0.258  Sum_probs=115.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+....+++|||+++|+|.+.+...     ..+++..+..++.|++.|+.|+|   +++++|+|++|+|++++
T Consensus        48 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~  119 (237)
T cd05576          48 VCLHKYIVSEDSVFLVLQHAEGGKLWSHISKF-----LNIPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLD  119 (237)
T ss_pred             eehhhheecCCeEEEEEecCCCCCHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEc
Confidence            35667778888899999999999999988653     34788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceeccccccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      .+..+++.|||.+........    ....+..|+|||...+..++.++|+||+|+++ |++++|+.|+..
T Consensus       120 ~~~~~~l~df~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il-~el~~g~~~~~~  184 (237)
T cd05576         120 DRGHIQLTYFSRWSEVEDSCD----GEAVENMYCAPEVGGISEETEACDWWSLGAIL-FELLTGKTLVEC  184 (237)
T ss_pred             CCCCEEEecccchhccccccc----cCCcCccccCCcccCCCCCCchhhHHHHHHHH-HHHHHCcchhhc
Confidence            999999999997654432211    12345669999999888899999999999999 999999987654

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.94  E-value=3.8e-27  Score=168.56  Aligned_cols=141  Identities=21%  Similarity=0.400  Sum_probs=120.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+..+...++++||+++++|.+.+..      ..+++.++..++.|++.++.+||   +.+++|+||+|.||+++
T Consensus        79 v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~------~~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~  149 (296)
T cd06655          79 VNFLDSFLVGDELFVVMEYLAGGSLTDVVTE------TCMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLG  149 (296)
T ss_pred             eeeeeeEecCceEEEEEEecCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEC
Confidence            4678888888999999999999999988753      34788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||++......... .....++..|+|||.+.+..++.++|+||||+++ |++++|+.||...+
T Consensus       150 ~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil-~~lltg~~pf~~~~  219 (296)
T cd06655         150 MDGSVKLTDFGFCAQITPEQSK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMA-IEMVEGEPPYLNEN  219 (296)
T ss_pred             CCCCEEEccCccchhccccccc-CCCcCCCccccCcchhcCCCCCchhhHHHHHHHH-HHHHhCCCCCCCCC
Confidence            9999999999987655432211 1223467789999999888899999999999999 99999999997754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.94  E-value=3.2e-27  Score=166.28  Aligned_cols=141  Identities=26%  Similarity=0.346  Sum_probs=117.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++..++..++++||+++++|.+.+...     ..+++..+..++.|++.++.|||   +.+++|+|++|.||+++
T Consensus        69 i~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~  140 (267)
T cd06646          69 VAYFGSYLSREKLWICMEYCGGGSLQDIYHVT-----GPLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLT  140 (267)
T ss_pred             eeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEC
Confidence            46788888888999999999999999988643     45788888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccc---cCCCCCCcceEeccccccCcceecccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA---TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~---~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .++.++++|||++........ ......++..|+|||.+.   ...++.++|+||+|+++ ++|++|..||...
T Consensus       141 ~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il-~el~~g~~p~~~~  212 (267)
T cd06646         141 DNGDVKLADFGVAAKITATIA-KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITA-IELAELQPPMFDL  212 (267)
T ss_pred             CCCCEEECcCccceeeccccc-ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHH-HHHHhCCCCcccc
Confidence            999999999998876532221 112235678899999874   34578899999999999 9999999998544

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.94  E-value=2e-26  Score=163.69  Aligned_cols=140  Identities=23%  Similarity=0.372  Sum_probs=114.2

Q ss_pred             CeEEEEEecC--CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLET--ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      +++.+++...  ...+++|||+++++|.+.+....    ..+++..+..++.|++.++.|+|   +++++|+|++|.||+
T Consensus        69 ~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~----~~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil  141 (284)
T cd05079          69 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNK----NKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVL  141 (284)
T ss_pred             eeeeeEEecCCCCceEEEEEccCCCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEE
Confidence            3567777664  56789999999999999885432    35788888999999999999999   899999999999999


Q ss_pred             ecCCCceEEEecCCCcccCCCcce--eeeeecccccccCccccccCCCCCCcceEeccccccCcceeccccc
Q 031436           79 FQEQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWY  148 (159)
Q Consensus        79 ~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~  148 (159)
                      ++.+..++++|||++.........  ......++..|+|||.+.+..++.++|+||||+++ |+++++..|.
T Consensus       142 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il-~ellt~~~~~  212 (284)
T cd05079         142 VESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTL-YELLTYCDSE  212 (284)
T ss_pred             EcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhh-hhhhcCCCCC
Confidence            999999999999988765433221  11223456679999999888899999999999999 9999976654

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.94  E-value=1.3e-26  Score=163.36  Aligned_cols=144  Identities=22%  Similarity=0.292  Sum_probs=117.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++.+++.++...++++||+++++|.+++....    ..+++.....++.|++.|+.+||   +++++|+|++|.||+++
T Consensus        68 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~  140 (269)
T cd05065          68 IHLEGVVTKSRPVMIITEFMENGALDSFLRQND----GQFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVN  140 (269)
T ss_pred             ceEEEEECCCCceEEEEecCCCCcHHHHHhhCC----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEc
Confidence            467888888889999999999999999886532    35788888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCccee--eeeec--ccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRI--RGRVM--GTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~--~~~~~--~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..+++.|||.+..........  .....  .+..|++||.+.+..++.++|+||+|+++ +++++ |..||...+
T Consensus       141 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l-~e~l~~g~~p~~~~~  216 (269)
T cd05065         141 SNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVM-WEVMSYGERPYWDMS  216 (269)
T ss_pred             CCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHH-HHHhcCCCCCCCCCC
Confidence            99999999999876543322111  11111  13469999999888899999999999999 88775 999986543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.94  E-value=2.2e-27  Score=177.11  Aligned_cols=138  Identities=26%  Similarity=0.386  Sum_probs=116.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe-
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF-   79 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~-   79 (159)
                      |++.+++.++.+.|+|||.+.++-+.+.+...+      ........|+.+++.++.|||   ++|++||||+|.|||+ 
T Consensus       379 v~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~------~~~~e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~  449 (612)
T KOG0603|consen  379 VKSHDVYEDGKEIYLVMELLDGGELLRRIRSKP------EFCSEASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLD  449 (612)
T ss_pred             eeecceecCCceeeeeehhccccHHHHHHHhcc------hhHHHHHHHHHHHHHHHHHHH---hcCeeecCCChhheeec
Confidence            456788889999999999999988888776532      223666789999999999999   9999999999999999 


Q ss_pred             cCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           80 QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +...+++++|||..+.....  ..  ...-+..|.|||++...+++.++||||+|+++ |+|++|+.||....
T Consensus       450 ~~~g~lrltyFG~a~~~~~~--~~--tp~~t~~y~APEvl~~~~yt~acD~WSLGvlL-y~ML~G~tp~~~~P  517 (612)
T KOG0603|consen  450 GSAGHLRLTYFGFWSELERS--CD--TPALTLQYVAPEVLAIQEYTEACDWWSLGVLL-YEMLTGRTLFAAHP  517 (612)
T ss_pred             CCCCcEEEEEechhhhCchh--hc--ccchhhcccChhhhccCCCCcchhhHHHHHHH-HHHHhCCCccccCC
Confidence            57788999999988766443  11  12357789999999999999999999999999 99999999998754

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.94  E-value=6.7e-27  Score=166.56  Aligned_cols=141  Identities=23%  Similarity=0.312  Sum_probs=116.9

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++++++..++..++++||+++++|.+.+...     ..++...+..++.|++.++.+||   +.+++|+||+|+||+++.
T Consensus        69 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~  140 (290)
T cd05613          69 TLHYAFQTDTKLHLILDYINGGELFTHLSQR-----ERFKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDS  140 (290)
T ss_pred             ceeeEeecCCeEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECC
Confidence            4667788888889999999999999988654     34678888888999999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccccC--CCCCCcceEeccccccCcceecccccccC
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG--DCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~--~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      +..++++|||.+...............++..|+|||.+...  .++.++|+||||+++ |++++|..||...
T Consensus       141 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l-~~ll~g~~p~~~~  211 (290)
T cd05613         141 NGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLM-YELLTGASPFTVD  211 (290)
T ss_pred             CCCEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHH-HHHhcCCCCCCcC
Confidence            99999999998766533222212233467889999998753  467899999999999 9999999999754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.94  E-value=8.5e-27  Score=163.33  Aligned_cols=142  Identities=28%  Similarity=0.431  Sum_probs=116.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++. ++..++++||+++|+|.+.+...     ..+++..+..++.|++.++.+||   ..+++|+||+|.|++++
T Consensus        59 v~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~  129 (257)
T cd05060          59 VRLIGVCK-GEPLMLVMELAPLGPLLKYLKKR-----REIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLV  129 (257)
T ss_pred             eeEEEEEc-CCceEEEEEeCCCCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEc
Confidence            45677765 46789999999999999998654     35788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceee--eeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIR--GRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~--~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..++++|||.+...........  ....++..|+|||...+..++.++|+||||+++ |++++ |..||...+
T Consensus       130 ~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~~~~~~g~~p~~~~~  203 (257)
T cd05060         130 NRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTL-WEAFSYGAKPYGEMK  203 (257)
T ss_pred             CCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHH-HHHHcCCCCCcccCC
Confidence            999999999998876543332111  111224569999999888899999999999999 99997 999997654

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.94  E-value=5.2e-27  Score=166.52  Aligned_cols=142  Identities=25%  Similarity=0.352  Sum_probs=118.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++..++..++++||++++++.......     ..+++..+..++.|++.++.+||   +.+++|+|++|.||+++
T Consensus        63 ~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~  134 (286)
T cd07847          63 VNLIEVFRRKRKLHLVFEYCDHTVLNELEKNP-----RGVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILIT  134 (286)
T ss_pred             eeeeeEEeeCCEEEEEEeccCccHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEc
Confidence            46788898888999999999987777665432     35788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.++++|||.+......... .....++..|+|||.+.+ ..++.++|+||||+++ +++++|+.||.+.+
T Consensus       135 ~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~-~~l~~g~~p~~~~~  205 (286)
T cd07847         135 KQGQIKLCDFGFARILTGPGDD-YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVF-AELLTGQPLWPGKS  205 (286)
T ss_pred             CCCcEEECccccceecCCCccc-ccCcccccccCCHHHHhCCCCcCchhhhHHHHHHH-HHHHhCCCCCCCCC
Confidence            9999999999988766443211 112245678999999876 4578999999999999 99999999997654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=4.2e-27  Score=178.91  Aligned_cols=144  Identities=15%  Similarity=0.150  Sum_probs=115.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+.+..++++|++. +++.+.+..................++.|++.||.|||   +++++||||||.||+++
T Consensus       226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH---~~gIiHrDLKP~NILl~  301 (501)
T PHA03210        226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIHRDIKLENIFLN  301 (501)
T ss_pred             CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEC
Confidence            578899999999999999995 58877765432111122335567789999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceeccc-ccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRA-WYR  149 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~-p~~  149 (159)
                      .++.+||+|||++..+............++..|+|||.+.+..++.++|+|||||++ |+|++|.. |+.
T Consensus       302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil-~ell~~~~~p~~  370 (501)
T PHA03210        302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLIL-LDMLSHDFCPIG  370 (501)
T ss_pred             CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHH-HHHHHCCCCCcc
Confidence            999999999999876644332222234678999999999999999999999999999 99999874 443

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.94  E-value=5.2e-27  Score=164.18  Aligned_cols=144  Identities=25%  Similarity=0.410  Sum_probs=118.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++......++++||+++++|.+.+....    ..++++.+..++.|++.++.++|   +.+++|+|++|.||+++
T Consensus        62 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~  134 (256)
T cd05112          62 VQLYGVCTERSPICLVFEFMEHGCLSDYLRAQR----GKFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVG  134 (256)
T ss_pred             eeEEEEEccCCceEEEEEcCCCCcHHHHHHhCc----cCCCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEc
Confidence            467888888889999999999999998886532    34678888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..++++|||.+................+..|+|||.+.+..++.++|+||+|+++ |++++ |..||...+
T Consensus       135 ~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l-~el~~~g~~p~~~~~  206 (256)
T cd05112         135 ENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLM-WEVFSEGKTPYENRS  206 (256)
T ss_pred             CCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHH-HHHHcCCCCCCCcCC
Confidence            999999999998765543221111112245679999999888899999999999999 99987 999997653

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.94  E-value=2.8e-27  Score=169.26  Aligned_cols=141  Identities=23%  Similarity=0.392  Sum_probs=120.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.|..++..++++||+++++|.+.+..      ..+++..+..++.|++.++.+||   +.+++|+||+|.||+++
T Consensus        79 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~------~~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~  149 (297)
T cd06656          79 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLG  149 (297)
T ss_pred             eeEEEEEecCCEEEEeecccCCCCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEC
Confidence            4678899988999999999999999998854      34677888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.++++|||.+......... .....++..|++||.+.+..++.++|+||||+++ |++++|..||.+.+
T Consensus       150 ~~~~~~l~Dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil-~~l~tg~~pf~~~~  219 (297)
T cd06656         150 MDGSVKLTDFGFCAQITPEQSK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMA-IEMVEGEPPYLNEN  219 (297)
T ss_pred             CCCCEEECcCccceEccCCccC-cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHH-HHHHhCCCCCCCCC
Confidence            9999999999987654332211 1223467789999999988899999999999999 99999999997754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.94  E-value=2e-27  Score=170.04  Aligned_cols=139  Identities=22%  Similarity=0.371  Sum_probs=118.5

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++++.+..++..++++||+++++|.+.+..      ..+++..+..++.|++.++.++|   +.+++|+|++|.||+++.
T Consensus        82 ~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~  152 (297)
T cd06659          82 EMYKSYLVGEELWVLMEFLQGGALTDIVSQ------TRLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTL  152 (297)
T ss_pred             hhhhheeeCCeEEEEEecCCCCCHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEcc
Confidence            567778888899999999999999887743      34778889999999999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      +..++++|||++......... .....++..|+|||.+.+..++.++|+||||+++ ++|++|+.||...
T Consensus       153 ~~~~kL~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il-~el~~g~~p~~~~  220 (297)
T cd06659         153 DGRVKLSDFGFCAQISKDVPK-RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMV-IEMVDGEPPYFSD  220 (297)
T ss_pred             CCcEEEeechhHhhccccccc-ccceecCccccCHHHHccCCCCchhhHHHHHHHH-HHHHhCCCCCCCC
Confidence            999999999987654332221 1224577889999999888899999999999999 9999999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.94  E-value=8.9e-27  Score=165.34  Aligned_cols=148  Identities=17%  Similarity=0.282  Sum_probs=119.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCC-----------CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ-----------PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVF   69 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-----------~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h   69 (159)
                      |++++++.+.+..++++||+.+++|.+++.....           .....++...+..++.|++.|+.|+|   +.+++|
T Consensus        71 v~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H  147 (283)
T cd05091          71 VCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHVVH  147 (283)
T ss_pred             CeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HcCccc
Confidence            5788999998999999999999999988752110           01134677788899999999999999   899999


Q ss_pred             ecCCCCCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccc
Q 031436           70 RNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAW  147 (159)
Q Consensus        70 ~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p  147 (159)
                      +|+||.||+++++..+|++|||++........ .......++..|+|||.+.+..++.++|+||+|+++ ++|++ |..|
T Consensus       148 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l-~el~~~g~~p  226 (283)
T cd05091         148 KDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVL-WEVFSYGLQP  226 (283)
T ss_pred             cccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHH-HHHHcCCCCC
Confidence            99999999999988999999998776543221 111222345689999999888899999999999999 99998 8889


Q ss_pred             cccCC
Q 031436          148 YRSED  152 (159)
Q Consensus       148 ~~~~~  152 (159)
                      |.+.+
T Consensus       227 ~~~~~  231 (283)
T cd05091         227 YCGYS  231 (283)
T ss_pred             CCCCC
Confidence            87643

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.94  E-value=4.8e-27  Score=165.68  Aligned_cols=144  Identities=24%  Similarity=0.346  Sum_probs=116.1

Q ss_pred             CeEEEEEecC------CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCLET------ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~~------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      +++++.|...      ...++++||+.+++|.+.+.....   ..+++..+..++.|++.++.|||   +++++|+|++|
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~---~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~  139 (272)
T cd06637          66 ATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG---NTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKG  139 (272)
T ss_pred             eeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCH
Confidence            3567777642      347899999999999998875322   45788888899999999999999   89999999999


Q ss_pred             CCEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccc-----cCCCCCCcceEeccccccCcceecccccc
Q 031436           75 SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA-----TGDCNEKCDVYSFDGSRDSGHLTGRAWYR  149 (159)
Q Consensus        75 ~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~-----~~~~~~~~DvwS~g~~~~~~~~~g~~p~~  149 (159)
                      .||+++.+..++++|||++........ ......++..|+|||.+.     ...++.++|+||+|+++ |++++|..||.
T Consensus       140 ~nili~~~~~~~l~Dfg~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l-~el~~g~~p~~  217 (272)
T cd06637         140 QNVLLTENAEVKLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITA-IEMAEGAPPLC  217 (272)
T ss_pred             HHEEECCCCCEEEccCCCceecccccc-cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHH-HHHHhCCCCcc
Confidence            999999999999999998765432211 122345778899999986     33578899999999999 99999999996


Q ss_pred             cCC
Q 031436          150 SED  152 (159)
Q Consensus       150 ~~~  152 (159)
                      ..+
T Consensus       218 ~~~  220 (272)
T cd06637         218 DMH  220 (272)
T ss_pred             ccC
Confidence            543

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.94  E-value=5.8e-27  Score=166.14  Aligned_cols=134  Identities=27%  Similarity=0.386  Sum_probs=115.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+..++..++++||+++++|...         ..+++..+..++.|++.|+.|+|   +.+++|+||+|.||+++
T Consensus        62 v~~~~~~~~~~~~~lv~e~~~~~~l~~~---------~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~  129 (279)
T cd06619          62 IGFYGAFFVENRISICTEFMDGGSLDVY---------RKIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVN  129 (279)
T ss_pred             eeEEEEEEECCEEEEEEecCCCCChHHh---------hcCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEEC
Confidence            4678899999999999999999888543         23567777889999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceeccccccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      .+..++++|||++........   ....++..|+|||.+.+..++.++|+||||+++ |++++|+.||..
T Consensus       130 ~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l-~~l~~g~~pf~~  195 (279)
T cd06619         130 TRGQVKLCDFGVSTQLVNSIA---KTYVGTNAYMAPERISGEQYGIHSDVWSLGISF-MELALGRFPYPQ  195 (279)
T ss_pred             CCCCEEEeeCCcceecccccc---cCCCCChhhcCceeecCCCCCCcchHHHHHHHH-HHHHhCCCCchh
Confidence            999999999998876543221   223577889999999988999999999999999 999999999964

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.94  E-value=4.1e-27  Score=165.55  Aligned_cols=143  Identities=24%  Similarity=0.413  Sum_probs=120.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++.++|.+++..++++||+++++|.+.+...     ..+++..+..++.|++.++.++|   +.+++|+||+|.||+++
T Consensus        65 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~  136 (265)
T cd06631          65 VQYLGTCLDDNTISIFMEFVPGGSISSILNRF-----GPLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLM  136 (265)
T ss_pred             eeEeeEeecCCeEEEEEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEEC
Confidence            46788898889999999999999999988653     34678888889999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCc-----ceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGE-----TRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~-----~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||.+.......     ........++..|+|||...+..++.++|+||+|+++ +++++|+.||...+
T Consensus       137 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~-~~l~~g~~p~~~~~  212 (265)
T cd06631         137 PNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTV-FEMATGKPPLASMD  212 (265)
T ss_pred             CCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHH-HHHHhCCCccccCC
Confidence            99999999999876543211     1111223467789999999888899999999999999 99999999997644

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.94  E-value=8.4e-27  Score=163.56  Aligned_cols=139  Identities=22%  Similarity=0.391  Sum_probs=114.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++.+..+...+++|||+.+|+|.+.+...+    ..+++.....++.|++.|+.|||   +++++|||++|.||+++
T Consensus        62 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~  134 (258)
T cd05078          62 VLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNK----NLINISWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLI  134 (258)
T ss_pred             hheeeEEEeCCCcEEEEecCCCCcHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEe
Confidence            467888988889999999999999999987543    35678888899999999999999   89999999999999997


Q ss_pred             CCCc--------eEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceec-cccccc
Q 031436           81 EQSV--------AKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTG-RAWYRS  150 (159)
Q Consensus        81 ~~~~--------~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g-~~p~~~  150 (159)
                      .+..        ++++|||.+.......     ...++..|+|||.+.+. .++.++|+||||+++ |++++| ..|+..
T Consensus       135 ~~~~~~~~~~~~~~l~d~g~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l-~~l~~g~~~~~~~  208 (258)
T cd05078         135 REEDRKTGNPPFIKLSDPGISITVLPKE-----ILLERIPWVPPECIENPQNLSLAADKWSFGTTL-WEIFSGGDKPLSA  208 (258)
T ss_pred             cccccccCCCceEEecccccccccCCch-----hccccCCccCchhccCCCCCCchhhHHHHHHHH-HHHHcCCCCChhh
Confidence            6643        6899999876543221     23466789999998764 578999999999999 999998 467655


Q ss_pred             CC
Q 031436          151 ED  152 (159)
Q Consensus       151 ~~  152 (159)
                      .+
T Consensus       209 ~~  210 (258)
T cd05078         209 LD  210 (258)
T ss_pred             cc
Confidence            44

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.94  E-value=6.8e-27  Score=164.50  Aligned_cols=142  Identities=25%  Similarity=0.320  Sum_probs=115.7

Q ss_pred             CeEEEEEecC--CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLET--ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      +++++++.+.  ..+++++||+++++|.+.+...     ..++......++.|++.++.++|   +++++|+||+|+||+
T Consensus        67 ~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil  138 (265)
T cd06652          67 VQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSY-----GALTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANIL  138 (265)
T ss_pred             eeEEeEeccCCCceEEEEEEecCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEE
Confidence            3567777653  4577999999999999988653     34677788899999999999999   899999999999999


Q ss_pred             ecCCCceEEEecCCCcccCCCcc--eeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           79 FQEQSVAKLFDFSYSESIPEGET--RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        79 ~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      ++.+..++++|||.+........  .......++..|+|||.+.+..++.++|+||||+++ |++++|+.||...
T Consensus       139 ~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il-~el~~g~~p~~~~  212 (265)
T cd06652         139 RDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTV-VEMLTEKPPWAEF  212 (265)
T ss_pred             ecCCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHH-HHHhhCCCCCCcc
Confidence            99999999999998765432111  111123467789999999888899999999999999 9999999999754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.94  E-value=8.4e-27  Score=163.22  Aligned_cols=138  Identities=24%  Similarity=0.390  Sum_probs=115.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+.. ...++++||+++|+|.+++....    ..++...+..++.|++.|+.|||   +++++|+||+|.||+++
T Consensus        64 ~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~  135 (259)
T cd05037          64 VKLYGVCVR-DENIMVEEYVKFGPLDVFLHREK----NNVSLHWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVA  135 (259)
T ss_pred             hheeeEEec-CCcEEEEEcCCCCcHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEe
Confidence            467888887 77899999999999999887542    25778888999999999999999   89999999999999998


Q ss_pred             CCC-------ceEEEecCCCcccCCCcceeeeeecccccccCccccccC--CCCCCcceEeccccccCccee-ccccccc
Q 031436           81 EQS-------VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG--DCNEKCDVYSFDGSRDSGHLT-GRAWYRS  150 (159)
Q Consensus        81 ~~~-------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~--~~~~~~DvwS~g~~~~~~~~~-g~~p~~~  150 (159)
                      .+.       .++++|||.+.......     ...++..|+|||.+.+.  .++.++|+||||+++ +++++ |..||..
T Consensus       136 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~-~~l~~~~~~p~~~  209 (259)
T cd05037         136 RYGLNEGYVPFIKLSDPGIPITVLSRE-----ERVERIPWIAPECIRNGQASLTIAADKWSFGTTL-LEICSNGEEPLST  209 (259)
T ss_pred             cCccccCCceeEEeCCCCccccccccc-----ccccCCCccChhhhcCCCCCcchhhHHHHHHHHH-HHHHhCCCCCccc
Confidence            776       79999999887654321     12345679999998776  789999999999999 99988 5788866


Q ss_pred             CC
Q 031436          151 ED  152 (159)
Q Consensus       151 ~~  152 (159)
                      .+
T Consensus       210 ~~  211 (259)
T cd05037         210 LS  211 (259)
T ss_pred             CC
Confidence            53

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.94  E-value=4.4e-27  Score=165.49  Aligned_cols=145  Identities=20%  Similarity=0.302  Sum_probs=120.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+.+..++++||+++++|.+.+..... ....++...+..++.|++.|+.|||   +++++|+||+|+||+++
T Consensus        65 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~  140 (267)
T cd08228          65 IKYLDSFIEDNELNIVLELADAGDLSQMIKYFKK-QKRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFIT  140 (267)
T ss_pred             eeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhh-ccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEc
Confidence            4577888888899999999999999988764321 1145778888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .+..++++|||.+......... .....++..|+|||.+.+..++.++|+||+|+++ +++++|+.||...
T Consensus       141 ~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l-~el~~g~~p~~~~  209 (267)
T cd08228         141 ATGVVKLGDLGLGRFFSSKTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL-YEMAALQSPFYGD  209 (267)
T ss_pred             CCCCEEECccccceeccchhHH-HhcCCCCccccChhhhccCCCCchhhHHHHHHHH-HHHhcCCCCCccc
Confidence            9999999999987665432221 1123467789999999888899999999999999 9999999998654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.94  E-value=1e-26  Score=163.17  Aligned_cols=143  Identities=24%  Similarity=0.376  Sum_probs=113.4

Q ss_pred             CeEEEEEe-cCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe
Q 031436            1 MRLIGCCL-ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~   79 (159)
                      |++++.+. .++..++++||+.+|+|.+++....    ..........++.|++.|+.|+|   +.+++|+|++|.||++
T Consensus        59 v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili  131 (262)
T cd05058          59 LSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSET----HNPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCML  131 (262)
T ss_pred             ceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEE
Confidence            46778775 4556889999999999999986532    23456667888999999999999   8999999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCccee---eeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccC
Q 031436           80 QEQSVAKLFDFSYSESIPEGETRI---RGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSE  151 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~~---~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~  151 (159)
                      +.+..++++|||.+..........   .....++..|+|||.+.+..++.++|+||||+++ |++++ |.+||...
T Consensus       132 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~el~~~~~~~~~~~  206 (262)
T cd05058         132 DESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL-WELMTRGAPPYPDV  206 (262)
T ss_pred             cCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHH-HHHHcCCCCCCCCC
Confidence            999999999999876543221110   0112345679999999888899999999999999 99998 56777654

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.94  E-value=7.2e-27  Score=164.55  Aligned_cols=147  Identities=27%  Similarity=0.414  Sum_probs=119.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCC--CCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQP--NFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      ++++++|..+...++++||+++++|.+.+......  ....+++..+..++.|++.++.|+|   +++++|+|++|.||+
T Consensus        62 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil  138 (269)
T cd05044          62 VKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAARNCL  138 (269)
T ss_pred             eeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCChheEE
Confidence            46788998888999999999999999988643211  1234677888899999999999999   899999999999999


Q ss_pred             ecCCC-----ceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccC
Q 031436           79 FQEQS-----VAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSE  151 (159)
Q Consensus        79 ~~~~~-----~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~  151 (159)
                      ++.+.     .++++|||++........ ........+..|+|||.+.+..++.++|+||||+++ |+|++ |+.||...
T Consensus       139 ~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il-~ellt~g~~p~~~~  217 (269)
T cd05044         139 VSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLM-WEILTLGQQPYPAL  217 (269)
T ss_pred             EecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHH-HHHHHcCCCCCccc
Confidence            98776     799999998865543221 111122345679999999988899999999999999 99997 99999754

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=5.3e-27  Score=176.27  Aligned_cols=138  Identities=18%  Similarity=0.167  Sum_probs=115.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++..++..++++|++. ++|.+.+....    ..+++..+..++.|++.||.|||   +++++||||||.||+++
T Consensus       223 v~l~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~  294 (461)
T PHA03211        223 LALLDVRVVGGLTCLVLPKYR-SDLYTYLGARL----RPLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVN  294 (461)
T ss_pred             CcEEEEEEECCEEEEEEEccC-CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEEC
Confidence            578899999999999999995 68888875432    45889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcce-eeeeecccccccCccccccCCCCCCcceEeccccccCcceecccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETR-IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAW  147 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p  147 (159)
                      .+..++|+|||++......... ......++..|+|||.+.+..++.++|+|||||++ |++++|..|
T Consensus       295 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL-~El~~g~~~  361 (461)
T PHA03211        295 GPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVI-FEAAVHTAS  361 (461)
T ss_pred             CCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHH-HHHHHcCCC
Confidence            9999999999998755332211 11224578899999999999999999999999999 999887643

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.94  E-value=9.4e-27  Score=171.65  Aligned_cols=140  Identities=25%  Similarity=0.362  Sum_probs=120.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |.|...|+...+.++|||-+. |+....+-....   .++++...+.++.||+.||+|||   .++|+|+||||+|+|+.
T Consensus       626 V~le~M~ET~ervFVVMEKl~-GDMLEMILSsEk---gRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLa  698 (888)
T KOG4236|consen  626 VNLECMFETPERVFVVMEKLH-GDMLEMILSSEK---GRLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLA  698 (888)
T ss_pred             eEEEEeecCCceEEEEehhhc-chHHHHHHHhhc---ccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeec
Confidence            467778888999999999995 577666544322   67889888999999999999999   99999999999999996


Q ss_pred             CC---CceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceeccccccc
Q 031436           81 EQ---SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        81 ~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      ..   ..+|++|||+++.++....+.  ...|++.|+|||++..+.|+..-|+||+|+++ |.=++|.+||.-
T Consensus       699 s~~~FPQvKlCDFGfARiIgEksFRr--sVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIi-YVsLSGTFPFNE  768 (888)
T KOG4236|consen  699 SASPFPQVKLCDFGFARIIGEKSFRR--SVVGTPAYLAPEVLRNKGYNRSLDMWSVGVII-YVSLSGTFPFNE  768 (888)
T ss_pred             cCCCCCceeeccccceeecchhhhhh--hhcCCccccCHHHHhhccccccccceeeeEEE-EEEecccccCCC
Confidence            43   578999999999887654432  35799999999999999999999999999999 999999999964

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.94  E-value=1e-26  Score=162.76  Aligned_cols=143  Identities=25%  Similarity=0.396  Sum_probs=119.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++.+.. ...++++||+++++|.+.+.....   ..+++..+..++.|++.|+.++|   +++++|+|++|.||+++
T Consensus        59 v~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~  131 (257)
T cd05040          59 IRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDAL---GHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLA  131 (257)
T ss_pred             cceeEEEcC-CeEEEEEEecCCCcHHHHHHhccc---ccCcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEe
Confidence            456777777 888999999999999998876431   35788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcce--eeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~  151 (159)
                      .+..+|++|||.+.........  ......++..|++||.+.+..++.++|+||||+++ ++|++ |+.||...
T Consensus       132 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l-~el~t~g~~p~~~~  204 (257)
T cd05040         132 SDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTL-WEMFTYGEEPWAGL  204 (257)
T ss_pred             cCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHH-HHHHhCCCCCCCCC
Confidence            9999999999988766443221  11123356679999999888899999999999999 99998 99998643

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.94  E-value=4.4e-27  Score=165.46  Aligned_cols=146  Identities=21%  Similarity=0.310  Sum_probs=121.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+.+++..++++||+++++|.+.+..... ....+++.....++.|++.++.|||   +++++|+||+|+||+++
T Consensus        65 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~  140 (267)
T cd08229          65 IKYYASFIEDNELNIVLELADAGDLSRMIKHFKK-QKRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFIT  140 (267)
T ss_pred             hhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEc
Confidence            3567788888899999999999999998864321 1145788888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||.+......... .....++..|+|||.+.+..++.++|+||||+++ +++++|..||.+.+
T Consensus       141 ~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il-~~l~~g~~p~~~~~  210 (267)
T cd08229         141 ATGVVKLGDLGLGRFFSSKTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL-YEMAALQSPFYGDK  210 (267)
T ss_pred             CCCCEEECcchhhhccccCCcc-cccccCCcCccCHHHhcCCCccchhhHHHHHHHH-HHHHhCCCCccccc
Confidence            9999999999987655432221 1223467889999999888899999999999999 99999999997543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.94  E-value=1.4e-26  Score=161.56  Aligned_cols=143  Identities=24%  Similarity=0.393  Sum_probs=117.9

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++++++.+.+..++++||+++++|.+.+....    ..++...+..++.+++.++.++|   +++++|+|++|.||+++.
T Consensus        56 ~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~----~~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~  128 (251)
T cd05041          56 KLIGVCVQKQPIYIVMELVPGGSLLTFLRKKK----NRLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGE  128 (251)
T ss_pred             EEEEEEecCCCeEEEEEcCCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcC
Confidence            57788888899999999999999999886532    34678888899999999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceee-eeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           82 QSVAKLFDFSYSESIPEGETRIR-GRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~-~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      +..++++|||.+........... .....+..|+|||.+.+..++.++|+||+|+++ +++++ |..||.+.+
T Consensus       129 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~-~~l~t~~~~p~~~~~  200 (251)
T cd05041         129 NNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILL-WETFSLGDTPYPGMS  200 (251)
T ss_pred             CCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHH-HHHHhccCCCCccCC
Confidence            99999999998765532221111 112234569999999888899999999999999 99998 889987653

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.94  E-value=1.9e-27  Score=179.60  Aligned_cols=144  Identities=24%  Similarity=0.399  Sum_probs=124.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |||||+..+ ....+|+|.++.|+|.+.+.....   ..+.....-.|+.||+.|+.||.   .++++||||..+|+++.
T Consensus       174 iRLyGvVl~-qp~mMV~ELaplGSLldrLrka~~---~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNllla  246 (1039)
T KOG0199|consen  174 IRLYGVVLD-QPAMMVFELAPLGSLLDRLRKAKK---AILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLA  246 (1039)
T ss_pred             eEEeeeecc-chhhHHhhhcccchHHHHHhhccc---cceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheec
Confidence            689999987 788899999999999999987432   45677777889999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCccee--eeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRI--RGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      ....+||+|||+.+.+..+...-  .....-+..|.|||.+....|+.++|+|+|||+| |||++ |..||.+-.
T Consensus       247 sprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTi-WEMFtyGEePW~G~~  320 (1039)
T KOG0199|consen  247 SPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTI-WEMFTYGEEPWVGCR  320 (1039)
T ss_pred             ccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhH-HhhhccCCCCCCCCC
Confidence            88899999999999887765432  2333446679999999999999999999999999 88888 789997753

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=3.9e-27  Score=172.51  Aligned_cols=139  Identities=20%  Similarity=0.245  Sum_probs=115.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++++|++. ++|.+.+....    ..+++..+..++.|++.|+.|||   +.+++||||||.||+++
T Consensus       120 v~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~  191 (357)
T PHA03209        120 IRMKDTLVSGAITCMVLPHYS-SDLYTYLTKRS----RPLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFIN  191 (357)
T ss_pred             cChhheEEeCCeeEEEEEccC-CcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEC
Confidence            567888998899999999995 68888876432    46788999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceec-cccccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTG-RAWYRS  150 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g-~~p~~~  150 (159)
                      .+..++++|||.+........  .....++..|+|||.+.+..++.++|+||||+++ |+|+++ +.+|..
T Consensus       192 ~~~~~kl~DfG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl-~ell~~~~~~f~~  259 (357)
T PHA03209        192 DVDQVCIGDLGAAQFPVVAPA--FLGLAGTVETNAPEVLARDKYNSKADIWSAGIVL-FEMLAYPSTIFED  259 (357)
T ss_pred             CCCCEEEecCccccccccCcc--cccccccccccCCeecCCCCCCchhhHHHHHHHH-HHHHHcCCccccC
Confidence            999999999998764322211  1223578889999999998999999999999999 888874 455554

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.94  E-value=1e-26  Score=164.34  Aligned_cols=147  Identities=24%  Similarity=0.364  Sum_probs=119.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCC----CCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCC
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQP----NFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSN   76 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~n   76 (159)
                      |++++.+.+.+..+++|||+++|+|.+.+......    ....+++..+..++.|++.++.|||   +++++|+|++|+|
T Consensus        71 v~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~N  147 (275)
T cd05046          71 VRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVHRDLAARN  147 (275)
T ss_pred             eeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh---hcCcccCcCccce
Confidence            46788888888999999999999999988754311    1125788999999999999999999   8999999999999


Q ss_pred             EEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccC
Q 031436           77 ILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSE  151 (159)
Q Consensus        77 il~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~  151 (159)
                      ++++.+..+++.|++++...............++..|++||.+.+..++.++|+||||+++ +++++ |..||...
T Consensus       148 ili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l-~~l~~~~~~p~~~~  222 (275)
T cd05046         148 CLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLM-WEVFTQGELPFYGL  222 (275)
T ss_pred             EEEeCCCcEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHH-HHHHhCCCCCcccc
Confidence            9999999999999998765432221111122345679999999888889999999999999 99988 78888654

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.94  E-value=1.2e-26  Score=172.09  Aligned_cols=108  Identities=22%  Similarity=0.323  Sum_probs=89.2

Q ss_pred             cchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccc
Q 031436           40 VTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEY  118 (159)
Q Consensus        40 ~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~  118 (159)
                      +++..+..++.|++.|+.|||   +.+++|+|++|.||+++....++++|||++........ .......++..|+|||.
T Consensus       236 l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~  312 (401)
T cd05107         236 LSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPES  312 (401)
T ss_pred             CCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHH
Confidence            556677889999999999999   89999999999999999999999999999875432221 11122345678999999


Q ss_pred             cccCCCCCCcceEeccccccCccee-cccccccC
Q 031436          119 IATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSE  151 (159)
Q Consensus       119 ~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~  151 (159)
                      +.+..++.++|+||||+++ +++++ |..||...
T Consensus       313 ~~~~~~~~~~DvwslGvil-~e~l~~g~~P~~~~  345 (401)
T cd05107         313 IFNNLYTTLSDVWSFGILL-WEIFTLGGTPYPEL  345 (401)
T ss_pred             hcCCCCCcHhHHHHHHHHH-HHHHHcCCCCCCCC
Confidence            9888899999999999999 99997 88898754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.94  E-value=5.4e-27  Score=167.60  Aligned_cols=129  Identities=12%  Similarity=0.123  Sum_probs=104.7

Q ss_pred             eEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecCCC
Q 031436           14 VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS   93 (159)
Q Consensus        14 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~~~   93 (159)
                      ++++|++. .++.+.+...     ...+...+..++.|++.|+.|+|   +.+++||||||+||+++.+..++++|||++
T Consensus       103 ~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~iiHrDiKp~Nill~~~~~~~l~DFGla  173 (294)
T PHA02882        103 FILLEKLV-ENTKEIFKRI-----KCKNKKLIKNIMKDMLTTLEYIH---EHGISHGDIKPENIMVDGNNRGYIIDYGIA  173 (294)
T ss_pred             EEEEehhc-cCHHHHHHhh-----ccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCcEEEEEcCCc
Confidence            57778774 4776666543     22456778889999999999999   899999999999999999899999999998


Q ss_pred             cccCCCcc------eeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           94 ESIPEGET------RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        94 ~~~~~~~~------~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .....+..      .......++..|+|||...+..++.++|+||||+++ ++|++|+.||.+..
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l-~el~~g~~P~~~~~  237 (294)
T PHA02882        174 SHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCM-LKWAGIKLPWKGFG  237 (294)
T ss_pred             eeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHH-HHHHhCCCCCCccc
Confidence            76532211      111223578899999999999999999999999999 99999999998763

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=8.2e-27  Score=164.81  Aligned_cols=141  Identities=24%  Similarity=0.350  Sum_probs=120.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++.+.+.++..+++++||+++++|.+.+..      .++++..+..++.|++.++.++|   +.+++|+|++|.|++++
T Consensus        62 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~------~~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~  132 (274)
T cd06609          62 TKYYGSFLKGSKLWIIMEYCGGGSCLDLLKP------GKLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLS  132 (274)
T ss_pred             eeeeEEEEECCeEEEEEEeeCCCcHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEC
Confidence            4577888888899999999999999998864      25788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.++++|||.+........ ......++..|++||.+.+..++.++|+||||+++ |++++|+.||...+
T Consensus       133 ~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il-~~l~tg~~p~~~~~  202 (274)
T cd06609         133 EEGDVKLADFGVSGQLTSTMS-KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITA-IELAKGEPPLSDLH  202 (274)
T ss_pred             CCCCEEEcccccceeeccccc-ccccccCCccccChhhhccCCCCchhhHHHHHHHH-HHHHhCCCCcccCc
Confidence            999999999998876643321 12233567789999999988899999999999999 99999999997643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.94  E-value=6.9e-27  Score=167.39  Aligned_cols=142  Identities=21%  Similarity=0.341  Sum_probs=117.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..++++||+. ++|.+.+....    ..++...+..++.|++.|+.+||   +.+++|+||+|.||+++
T Consensus        67 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~----~~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~  138 (301)
T cd07873          67 VTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCG----NSINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLIN  138 (301)
T ss_pred             ceEEEEEecCCeEEEEEeccc-cCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEEC
Confidence            468899998899999999996 69988876532    35678888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||.+.......... ....++..|+|||.+.+. .++.++|+||+|+++ |+|++|++||.+.+
T Consensus       139 ~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l-~el~tg~~~f~~~~  209 (301)
T cd07873         139 ERGELKLADFGLARAKSIPTKTY-SNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIF-YEMSTGRPLFPGST  209 (301)
T ss_pred             CCCcEEECcCcchhccCCCCCcc-cccceeecccCcHHHhCCCCCccHHHHHHHHHHH-HHHHhCCCCCCCCC
Confidence            99999999999876543322111 122457789999988654 478899999999999 99999999998654

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.94  E-value=1.6e-26  Score=165.14  Aligned_cols=147  Identities=27%  Similarity=0.420  Sum_probs=117.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCC-------CCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCC
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQP-------NFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK   73 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~   73 (159)
                      +++++.+..++..+++|||+.+++|.+.+......       ....+++.....++.|++.|+.|||   +.+++|+|++
T Consensus        80 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlk  156 (295)
T cd05097          80 IRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLA  156 (295)
T ss_pred             CeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH---hcCeeccccC
Confidence            46789999999999999999999999988543210       1123567788899999999999999   8999999999


Q ss_pred             CCCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee--ccccccc
Q 031436           74 PSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT--GRAWYRS  150 (159)
Q Consensus        74 ~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~--g~~p~~~  150 (159)
                      |.|++++.+..+|++|||++........ .......++..|+|||...+..++.++|+||||+++ +++++  +..||..
T Consensus       157 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l-~el~~~~~~~p~~~  235 (295)
T cd05097         157 TRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTL-WEMFTLCKEQPYSL  235 (295)
T ss_pred             hhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHH-HHHHHcCCCCCCcc
Confidence            9999999998999999998765433221 111222346679999999888899999999999999 99987  6677765


Q ss_pred             C
Q 031436          151 E  151 (159)
Q Consensus       151 ~  151 (159)
                      .
T Consensus       236 ~  236 (295)
T cd05097         236 L  236 (295)
T ss_pred             c
Confidence            4

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=7.2e-27  Score=165.27  Aligned_cols=142  Identities=23%  Similarity=0.378  Sum_probs=119.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++..+...++++||+++++|.+.+..      ..+++..+..++.|++.++.++|   +.+++|+|++|+||+++
T Consensus        65 i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~------~~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~  135 (277)
T cd06917          65 TKYYGSYLKGPRLWIIMEYAEGGSVRTLMKA------GPIAEKYISVIIREVLVALKYIH---KVGVIHRDIKAANILVT  135 (277)
T ss_pred             eeEeeeeeeCCEEEEEEecCCCCcHHHHHHc------cCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEc
Confidence            4678888888899999999999999988753      25778889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.++++|||.+......... .....++..|+|||.+.+ ..++.++|+||||+++ |++++|+.||...+.
T Consensus       136 ~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l-~~ll~g~~p~~~~~~  207 (277)
T cd06917         136 NTGNVKLCDFGVAALLNQNSSK-RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITI-YEMATGNPPYSDVDA  207 (277)
T ss_pred             CCCCEEEccCCceeecCCCccc-cccccCCcceeCHHHhccCCccccchhHHHHHHHH-HHHHhCCCCCCCCCh
Confidence            9999999999987766443322 223357788999998865 4578999999999999 999999999977644

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1e-27  Score=178.52  Aligned_cols=137  Identities=27%  Similarity=0.391  Sum_probs=118.2

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ..-|++......|+|||||- |+-.|.+...+    +++.+.++..++.+.+.||.|||   +.+.||||+|.-|||++.
T Consensus        90 eYkgCyLre~TaWLVMEYCl-GSAsDlleVhk----KplqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse  161 (948)
T KOG0577|consen   90 EYKGCYLREHTAWLVMEYCL-GSASDLLEVHK----KPLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSE  161 (948)
T ss_pred             cccceeeccchHHHHHHHHh-ccHHHHHHHHh----ccchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecC
Confidence            34577888888899999995 69999888765    68899999999999999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccc---cCCCCCCcceEeccccccCcceecccccccCC
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA---TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~---~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+.+|++|||.+....     ....+.|+++|||||++.   ...|+.++||||+|++. .|+...++|+=.++
T Consensus       162 ~g~VKLaDFGSAsi~~-----PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITC-IELAERkPPlFnMN  229 (948)
T KOG0577|consen  162 PGLVKLADFGSASIMA-----PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC-IELAERKPPLFNMN  229 (948)
T ss_pred             CCeeeeccccchhhcC-----chhcccCCccccchhHheeccccccCCccceeeccchh-hhhhhcCCCccCch
Confidence            9999999999765432     123578999999999986   35699999999999999 99999999875544

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.94  E-value=1.7e-26  Score=164.36  Aligned_cols=141  Identities=21%  Similarity=0.390  Sum_probs=119.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+..++..++++||+++++|.+.+..      ..++...+..++.|++.++.++|   +.+++|+||+|.||+++
T Consensus        79 v~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~------~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~  149 (285)
T cd06648          79 VEMYSSYLVGDELWVVMEFLEGGALTDIVTH------TRMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLT  149 (285)
T ss_pred             heEEEEEEcCCeEEEEEeccCCCCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEc
Confidence            4678888888999999999999999998865      34677888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||.+......... .....++..|+|||.+.+..++.++|+||||+++ +++++|..||...+
T Consensus       150 ~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l-~ell~g~~p~~~~~  219 (285)
T cd06648         150 SDGRVKLSDFGFCAQVSKEVPR-RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMV-IEMVDGEPPYFNEP  219 (285)
T ss_pred             CCCcEEEcccccchhhccCCcc-cccccCCccccCHHHhcCCCCCCcccHHHHHHHH-HHHHhCCCCCcCCC
Confidence            9999999999976654332221 1223567889999999888899999999999999 99999999986543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.94  E-value=8.5e-29  Score=168.76  Aligned_cols=146  Identities=22%  Similarity=0.293  Sum_probs=115.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++|.+...+.-|+.||.|. -|+..+.+.--.-....+++....++..-.+.||.||-.  ...++|||+||.|||++
T Consensus       126 VkfyGa~F~EGdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILld  202 (361)
T KOG1006|consen  126 VKFYGALFSEGDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLD  202 (361)
T ss_pred             HHHhhhhhcCCceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEe
Confidence            578899999999999999995 587665543100011456777677777777899999985  67899999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc--CCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT--GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~--~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ..+.+|++|||.+..+..+..+  +.-.|...|||||-+..  ..|+.++|+||+|+++ +|++||..||++.+
T Consensus       203 r~G~vKLCDFGIcGqLv~SiAk--T~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL-~EvAtG~fPyr~w~  273 (361)
T KOG1006|consen  203 RHGDVKLCDFGICGQLVDSIAK--TVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITL-YEVATGNFPYRKWD  273 (361)
T ss_pred             cCCCEeeecccchHhHHHHHHh--hhccCCccccChhccCCccCCcchhhhhhhhcceE-eeeecCCCCcchHH
Confidence            9999999999998766544322  22357778999999853  4589999999999999 99999999998764

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.94  E-value=9e-27  Score=164.14  Aligned_cols=145  Identities=23%  Similarity=0.340  Sum_probs=121.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCC-CCeEEecCCCCCEEe
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS-RPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~-~~~~h~~l~~~nil~   79 (159)
                      +++++.+.+++..++++||+++++|.+.+..... ....++...+..++.|++.++.++|   + .+++|+|++|.||++
T Consensus        72 ~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh---~~~~i~H~dl~~~nil~  147 (269)
T cd08528          72 VRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKE-KKQRFTEERIWNIFVQMVLALRYLH---KEKRIVHRDLTPNNIML  147 (269)
T ss_pred             eeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHhc---cCCceeecCCCHHHEEE
Confidence            4678889999999999999999999987753211 1145788888999999999999999   5 679999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           80 QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +.+..++++|||.+.......  ......++..|++||.+.+..++.++|+||||+++ |++++|+.||...+
T Consensus       148 ~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll-~~l~~g~~p~~~~~  217 (269)
T cd08528         148 GEDDKVTITDFGLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCIL-YQMCTLQPPFYSTN  217 (269)
T ss_pred             CCCCcEEEecccceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHH-HHHHhCCCcccccC
Confidence            999999999999877654332  22234567889999999888899999999999999 99999999997654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.94  E-value=6.7e-27  Score=170.31  Aligned_cols=128  Identities=21%  Similarity=0.353  Sum_probs=108.9

Q ss_pred             CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEec
Q 031436           11 ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF   90 (159)
Q Consensus        11 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~   90 (159)
                      ...++++|++ +++|.+.+..      ..++...+..++.|++.|+.|||   +.+++||||+|.||+++.+..+|++||
T Consensus        93 ~~~~~~~~~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Df  162 (343)
T cd07878          93 NEVYLVTNLM-GADLNNIVKC------QKLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDF  162 (343)
T ss_pred             CcEEEEeecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcCC
Confidence            3468999998 7899887753      35788899999999999999999   899999999999999999999999999


Q ss_pred             CCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCCC
Q 031436           91 SYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      |++.......    ....++..|+|||.+.+ ..++.++|+||+|+++ |+|++|+.||.+.+.
T Consensus       163 g~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il-~el~~g~~pf~~~~~  221 (343)
T cd07878         163 GLARQADDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM-AELLKGKALFPGNDY  221 (343)
T ss_pred             ccceecCCCc----CCccccccccCchHhcCCccCCchhhhHhHHHHH-HHHHHCCCCCCCCCH
Confidence            9887654322    22357888999999876 4689999999999999 999999999987653

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.93  E-value=6.7e-27  Score=165.55  Aligned_cols=140  Identities=26%  Similarity=0.388  Sum_probs=118.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+..++..++|+||+++++|.+.+..      ..+++..+..++.|++.++.|+|   +++++|+|++|.||+++
T Consensus        65 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~  135 (277)
T cd06642          65 TRYYGSYLKGTKLWIIMEYLGGGSALDLLKP------GPLEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLS  135 (277)
T ss_pred             HhhhcccccCCceEEEEEccCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEe
Confidence            3567788888899999999999999988753      34678888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .++.+++.|||++......... .....++..|+|||.+.+..++.++|+||||+++ +++++|+.||...
T Consensus       136 ~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il-~el~tg~~p~~~~  204 (277)
T cd06642         136 EQGDVKLADFGVAGQLTDTQIK-RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITA-IELAKGEPPNSDL  204 (277)
T ss_pred             CCCCEEEccccccccccCcchh-hhcccCcccccCHHHhCcCCCchhhhHHHHHHHH-HHHHhCCCCCccc
Confidence            9999999999988765432211 1223467789999999888899999999999999 9999999998653

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.93  E-value=2e-26  Score=162.27  Aligned_cols=142  Identities=27%  Similarity=0.359  Sum_probs=116.1

Q ss_pred             eEEEEEec--CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe
Q 031436            2 RLIGCCLE--TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF   79 (159)
Q Consensus         2 ~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~   79 (159)
                      ++++++.+  +..+++++||+++++|.+.+...     ..++......++.|++.++.+||   +++++|+|++|.||++
T Consensus        68 ~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~  139 (266)
T cd06651          68 QYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAY-----GALTESVTRKYTRQILEGMSYLH---SNMIVHRDIKGANILR  139 (266)
T ss_pred             eEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEE
Confidence            56677765  35678999999999999988653     34677888889999999999999   8999999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcc--eeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           80 QEQSVAKLFDFSYSESIPEGET--RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +.+..++++|||++........  .......++..|+|||.+.+..++.++|+||+|+++ +++++|+.||...+
T Consensus       140 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~-~el~~g~~pf~~~~  213 (266)
T cd06651         140 DSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTV-VEMLTEKPPWAEYE  213 (266)
T ss_pred             CCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHH-HHHHHCCCCccccc
Confidence            9999999999998765432111  111123467789999999988899999999999999 99999999997553

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.93  E-value=2.3e-26  Score=160.90  Aligned_cols=141  Identities=26%  Similarity=0.390  Sum_probs=115.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+ +..+++|||+.+++|.+.+.....   ..+++..+..++.|++.++.++|   +++++|+|++|.|++++
T Consensus        62 ~~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~  134 (254)
T cd05083          62 VRLLGVILH-NGLYIVMELMSKGNLVNFLRTRGR---ALVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVS  134 (254)
T ss_pred             CeEEEEEcC-CCcEEEEECCCCCCHHHHHHhcCc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEc
Confidence            456777765 457999999999999998865421   35778888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~  153 (159)
                      .+..++++|||.+........    ....+..|+|||.+.+..++.++|+||||+++ +++++ |+.||...+.
T Consensus       135 ~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l-~el~~~g~~p~~~~~~  203 (254)
T cd05083         135 EDGVAKVSDFGLARVGSMGVD----NSKLPVKWTAPEALKHKKFSSKSDVWSYGVLL-WEVFSYGRAPYPKMSL  203 (254)
T ss_pred             CCCcEEECCCccceeccccCC----CCCCCceecCHHHhccCCcCchhhHHHHHHHH-HHHHhCCCCCCccCCH
Confidence            999999999998765432111    12235679999999888899999999999999 99987 9999976643

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.93  E-value=3.1e-26  Score=161.63  Aligned_cols=143  Identities=22%  Similarity=0.342  Sum_probs=119.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++..++..++++||+++++|.+.+...     ..++...+..++.|++.++.++|   +.+++|+|++|.||+++
T Consensus        71 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~  142 (272)
T cd06629          71 VQYLGFETTEEYLSIFLEYVPGGSIGSCLRTY-----GRFEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVD  142 (272)
T ss_pred             ceEEEEeccCCceEEEEecCCCCcHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEc
Confidence            46788999889999999999999999988654     45778888889999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCC--CCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGD--CNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~--~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||.+........ .......++..|+|||.+....  ++.++|+||+|+++ +++++|..||...+
T Consensus       143 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l-~~l~~g~~p~~~~~  216 (272)
T cd06629         143 ADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVV-LEMFAGRRPWSDEE  216 (272)
T ss_pred             CCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHH-HHHHhCCCCCcCcc
Confidence            999999999998765432211 1122334677899999987654  78999999999999 99999999997543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.93  E-value=1.3e-26  Score=164.36  Aligned_cols=143  Identities=24%  Similarity=0.375  Sum_probs=114.4

Q ss_pred             eEEEEEec------CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC
Q 031436            2 RLIGCCLE------TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS   75 (159)
Q Consensus         2 ~l~~~~~~------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~   75 (159)
                      ++++.+..      ++..+++|||+.+|+|.+.+...+.   ..+++..+..++.|++.++.|||   +.+++|+|++|+
T Consensus        77 ~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~  150 (282)
T cd06636          77 TYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG---NALKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQ  150 (282)
T ss_pred             EEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccC---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHH
Confidence            45666642      3567899999999999998875432   34677778889999999999999   899999999999


Q ss_pred             CEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccc-----cCCCCCCcceEeccccccCcceeccccccc
Q 031436           76 NILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA-----TGDCNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        76 nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~-----~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      ||+++.+..++++|||.+......... .....++..|+|||.+.     ...++.++|+||||+++ |+|++|..||..
T Consensus       151 nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l-~el~~g~~p~~~  228 (282)
T cd06636         151 NVLLTENAEVKLVDFGVSAQLDRTVGR-RNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITA-IEMAEGAPPLCD  228 (282)
T ss_pred             HEEECCCCCEEEeeCcchhhhhccccC-CCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHH-HHHHhCCCCccc
Confidence            999999999999999987654322111 12235677899999875     34578899999999999 999999999965


Q ss_pred             CC
Q 031436          151 ED  152 (159)
Q Consensus       151 ~~  152 (159)
                      .+
T Consensus       229 ~~  230 (282)
T cd06636         229 MH  230 (282)
T ss_pred             cC
Confidence            43

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.93  E-value=8.2e-27  Score=185.07  Aligned_cols=148  Identities=21%  Similarity=0.358  Sum_probs=114.9

Q ss_pred             CeEEEEEec--CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcC----CCCeEEecCCC
Q 031436            1 MRLIGCCLE--TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF----SRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~----~~~~~h~~l~~   74 (159)
                      |+++++|.+  ...+|+||||+.+|+|.+.+..... ....+++..+..++.||+.||.|||+..    ..+++|+||||
T Consensus        75 Vrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~-~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKP  153 (1021)
T PTZ00266         75 VRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYK-MFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKP  153 (1021)
T ss_pred             CeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcH
Confidence            567887754  3468899999999999998864321 1145888999999999999999999321    04599999999


Q ss_pred             CCEEecC-----------------CCceEEEecCCCcccCCCcceeeeeecccccccCcccccc--CCCCCCcceEeccc
Q 031436           75 SNILFQE-----------------QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT--GDCNEKCDVYSFDG  135 (159)
Q Consensus        75 ~nil~~~-----------------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~--~~~~~~~DvwS~g~  135 (159)
                      .||+++.                 ...+||+|||++........  .....+++.|+|||.+.+  ..++.++|||||||
T Consensus       154 eNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~--~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~  231 (1021)
T PTZ00266        154 QNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESM--AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGC  231 (1021)
T ss_pred             HHeEeecCccccccccccccccCCCCceEEccCCcccccccccc--ccccCCCccccCHHHHhccCCCCCchhHHHHHHH
Confidence            9999954                 23489999999876533221  123457889999999864  45789999999999


Q ss_pred             cccCcceecccccccCC
Q 031436          136 SRDSGHLTGRAWYRSED  152 (159)
Q Consensus       136 ~~~~~~~~g~~p~~~~~  152 (159)
                      ++ |+|++|+.||...+
T Consensus       232 IL-YELLTGk~PF~~~~  247 (1021)
T PTZ00266        232 II-YELCSGKTPFHKAN  247 (1021)
T ss_pred             HH-HHHHHCCCCCCcCC
Confidence            99 99999999997543

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.93  E-value=1.4e-26  Score=164.32  Aligned_cols=142  Identities=23%  Similarity=0.391  Sum_probs=118.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..++|+||+ +++|.+.+....    ..+++..+..++.|++.++.+||   +.+++|+|++|.||+++
T Consensus        62 ~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~  133 (286)
T cd07832          62 VKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEE----RPLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLIS  133 (286)
T ss_pred             cceeeEEecCCeeEEEeccc-CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEc
Confidence            46788888889999999999 999999886543    45788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .+..++++|||.+...............++..|+|||.+.+. .++.++|+||+|+++ +++++|.+||.+.
T Consensus       134 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l-~~l~tg~~~~~~~  204 (286)
T cd07832         134 ADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIF-AELLNGSPLFPGE  204 (286)
T ss_pred             CCCcEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHH-HHHHcCCcCcCCC
Confidence            999999999998776544322112223567789999998654 468999999999999 9999999888764

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.93  E-value=2.2e-26  Score=160.99  Aligned_cols=144  Identities=22%  Similarity=0.299  Sum_probs=120.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+.+.+..++++||+++++|.+.+.....   ..+++..+..++.|++.++.++|   +++++|+|++|.||+++
T Consensus        62 ~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~  135 (256)
T cd08218          62 VQYQESFEENGNLYIVMDYCEGGDLYKKINAQRG---VLFPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLT  135 (256)
T ss_pred             eeeEeeecCCCeEEEEEecCCCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEc
Confidence            3577888888999999999999999998865322   34678888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||.+......... .....++..|+|||.+.+..++.++|+||||+++ +++++|+.||...+
T Consensus       136 ~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~-~~l~~g~~~~~~~~  205 (256)
T cd08218         136 KDGTIKLGDFGIARVLNSTVEL-ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVL-YEMCTLKHAFEAGN  205 (256)
T ss_pred             CCCCEEEeeccceeecCcchhh-hhhccCCccccCHHHhCCCCCCCccchhHHHHHH-HHHHcCCCCccCCC
Confidence            9999999999987665432221 1123467789999999888899999999999999 99999999986543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.93  E-value=2.1e-26  Score=161.16  Aligned_cols=141  Identities=26%  Similarity=0.403  Sum_probs=119.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+.+.+..++++||+++++|.+.+.....   ..+++..+..++.|++.++.|+|   +++++|+||+|.||+++
T Consensus        63 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~  136 (256)
T cd05039          63 VQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGR---AVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVS  136 (256)
T ss_pred             eeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEe
Confidence            4678888888899999999999999998865432   35788999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .++.++++|||.+........    ....+..|+|||.+....++.++|+||||+++ +++++ |..||...+
T Consensus       137 ~~~~~~l~d~g~~~~~~~~~~----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il-~~l~~~g~~p~~~~~  204 (256)
T cd05039         137 EDLVAKVSDFGLAKEASQGQD----SGKLPVKWTAPEALREKKFSTKSDVWSFGILL-WEIYSFGRVPYPRIP  204 (256)
T ss_pred             CCCCEEEcccccccccccccc----cCCCcccccCchhhcCCcCCcHHHHHHHHHHH-HHHHhcCCCCCCCCC
Confidence            999999999998876633221    12345679999999888899999999999999 88886 999987654

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.93  E-value=1.4e-26  Score=164.39  Aligned_cols=143  Identities=20%  Similarity=0.312  Sum_probs=117.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..++++||++ ++|.+.+.....  ...++...+..++.|++.|+.|||   +.+++|+|++|+||+++
T Consensus        62 ~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~  135 (285)
T cd07861          62 VCLQDVLMQESRLYLIFEFLS-MDLKKYLDSLPK--GQYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLID  135 (285)
T ss_pred             eeeEEEEeeCCeEEEEEecCC-CCHHHHHhcCCC--CCcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEc
Confidence            468899999999999999997 688887754321  145788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .++.++++|||++........ ......++..|+|||.+.+. .++.++|+||+|+++ +++++|+.||.+.
T Consensus       136 ~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il-~~l~tg~~~~~~~  205 (285)
T cd07861         136 NKGVIKLADFGLARAFGIPVR-VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIF-AEMATKKPLFHGD  205 (285)
T ss_pred             CCCcEEECcccceeecCCCcc-cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHH-HHHHHCCCCCCCC
Confidence            999999999998765432221 11223457789999988654 478899999999999 9999999999754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.93  E-value=1.2e-26  Score=164.81  Aligned_cols=141  Identities=28%  Similarity=0.426  Sum_probs=119.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+...+.+++++||+++++|.+.+...     +.+++..+..++.+++.++.|||+  ..+++|+|++|.|++++
T Consensus        66 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~  138 (284)
T cd06620          66 VSFYGAFLNENNICMCMEFMDCGSLDRIYKKG-----GPIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVN  138 (284)
T ss_pred             ceEeeeEecCCEEEEEEecCCCCCHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEEC
Confidence            46788999889999999999999998887653     457888889999999999999993  25899999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||++.......   .....++..|+|||.+.+..++.++|+||||+++ +++++|+.||...+
T Consensus       139 ~~~~~~l~d~gl~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l-~~l~tg~~p~~~~~  206 (284)
T cd06620         139 SRGQIKLCDFGVSGELINSI---ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISI-IELALGKFPFAFSN  206 (284)
T ss_pred             CCCcEEEccCCcccchhhhc---cCccccCcccCCHHHHccCCCCccchHHHHHHHH-HHHHhCCCCCcccc
Confidence            99999999999876442221   1234578889999999888899999999999999 99999999998643

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.93  E-value=2.2e-26  Score=163.12  Aligned_cols=142  Identities=26%  Similarity=0.369  Sum_probs=116.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCC-CeEEecCCCCCEEe
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR-PIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~-~~~h~~l~~~nil~   79 (159)
                      |++++.+..++.+++++||++ |+|.+.+......+ ..+++..+..++.|++.|+.|||   ++ +++|+|++|.||++
T Consensus        63 v~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~  137 (283)
T cd06617          63 VTFYGALFREGDVWICMEVMD-TSLDKFYKKVYDKG-LTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLI  137 (283)
T ss_pred             eeeeEEEecCCcEEEEhhhhc-ccHHHHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEE
Confidence            568899999999999999996 68888776532222 56889999999999999999999   76 89999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc----CCCCCCcceEeccccccCcceeccccccc
Q 031436           80 QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT----GDCNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~----~~~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      +.+..+|++|||.+........  .....++..|+|||.+.+    ..++.++|+||||+++ |++++|+.||..
T Consensus       138 ~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l-~~l~~g~~p~~~  209 (283)
T cd06617         138 NRNGQVKLCDFGISGYLVDSVA--KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITM-IELATGRFPYDS  209 (283)
T ss_pred             CCCCCEEEeecccccccccccc--cccccCCccccChhhcCCcccccccCccccchhhHHHH-HHHHhCCCCCCc
Confidence            9999999999998776543211  112346778999998865    4468899999999999 999999999964

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.93  E-value=1.3e-26  Score=165.57  Aligned_cols=142  Identities=23%  Similarity=0.378  Sum_probs=119.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.|..++..++++||+++++|.+.+..      ..++...+..++.|++.++.+||   +++++|+|++|+|++++
T Consensus        79 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~------~~l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~  149 (293)
T cd06647          79 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLG  149 (293)
T ss_pred             eehhheeeeCCcEEEEEecCCCCcHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEc
Confidence            3567788888899999999999999998854      24677788889999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+..++++|||++......... .....++..|++||.+....++.++|+||||+++ +++++|+.||...+.
T Consensus       150 ~~~~~kL~dfg~~~~~~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll-~~ll~g~~pf~~~~~  220 (293)
T cd06647         150 MDGSVKLTDFGFCAQITPEQSK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMA-IEMVEGEPPYLNENP  220 (293)
T ss_pred             CCCCEEEccCcceecccccccc-cccccCChhhcCchhhccCCCCchhhHHHHHHHH-HHHHhCCCCCCCCCh
Confidence            9999999999987654432221 1223467789999999888899999999999999 999999999987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.93  E-value=1.3e-26  Score=166.73  Aligned_cols=144  Identities=20%  Similarity=0.291  Sum_probs=117.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..+++|||+++++|.+.+.....   ..+++.....++.|++.|+.|||   +.+++|+|++|+||+++
T Consensus        62 ~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~  135 (314)
T cd08216          62 LPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFP---EGLPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLS  135 (314)
T ss_pred             hhhhheeecCCeEEEEEeccCCCCHHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEe
Confidence            3567888888899999999999999998875422   35778888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcc------eeeeeecccccccCcccccc--CCCCCCcceEeccccccCcceecccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGET------RIRGRVMGTFGYLPPEYIAT--GDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~------~~~~~~~~~~~~~ape~~~~--~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .++.+++.||+.+........      .......++..|+|||.+..  ..++.++|+||||+++ +++++|+.||...
T Consensus       136 ~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il-~el~~g~~pf~~~  213 (314)
T cd08216         136 GDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITA-CELANGHVPFKDM  213 (314)
T ss_pred             cCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHH-HHHHhCCCCCCCC
Confidence            999999999997754432111      01112235567999999865  3578999999999999 9999999999754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.93  E-value=1.1e-26  Score=163.44  Aligned_cols=144  Identities=21%  Similarity=0.419  Sum_probs=120.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++++||+++++|.+.+...     .++++.....++.|++.|+.+||   +++++|+||+|.||+++
T Consensus        66 v~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~  137 (268)
T cd06630          66 IRMLGATCEDSHFNLFVEWMAGGSVSHLLSKY-----GAFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLID  137 (268)
T ss_pred             ehhhceeccCCeEEEEEeccCCCcHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEc
Confidence            46778888889999999999999999988653     45778888999999999999999   89999999999999998


Q ss_pred             CCC-ceEEEecCCCcccCCCcce---eeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQS-VAKLFDFSYSESIPEGETR---IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~-~~~l~d~~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+. .++++|||.+.........   ......++..|+|||.+.+..++.++|+||+|+++ +++++|..||...+.
T Consensus       138 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l-~~l~~g~~p~~~~~~  213 (268)
T cd06630         138 STGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVI-IEMATAKPPWNAEKH  213 (268)
T ss_pred             CCCCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHH-HHHHhCCCCCCCCCC
Confidence            665 5899999987665433211   11223467789999999888899999999999999 999999999976554

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.93  E-value=2.8e-26  Score=162.92  Aligned_cols=146  Identities=25%  Similarity=0.326  Sum_probs=115.8

Q ss_pred             CeEEEEEe-----cCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC
Q 031436            1 MRLIGCCL-----ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS   75 (159)
Q Consensus         1 v~l~~~~~-----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~   75 (159)
                      +++++++.     .++.++++|||+++++|.+.+..... ....+++..+..++.|++.++.|||   +.+++|+|++|.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~  153 (286)
T cd06638          78 VKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLK-RGERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKGN  153 (286)
T ss_pred             eeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhc-cCccccHHHHHHHHHHHHHHHHHHH---hCCccccCCCHH
Confidence            35677764     34568999999999999987753211 1145778888899999999999999   899999999999


Q ss_pred             CEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-----CCCCCCcceEeccccccCcceeccccccc
Q 031436           76 NILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-----GDCNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        76 nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-----~~~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      ||+++.+..++++|||++......... .....++..|+|||.+..     ..++.++|+||+|+++ +++++|+.||..
T Consensus       154 nili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~-~el~~g~~p~~~  231 (286)
T cd06638         154 NILLTTEGGVKLVDFGVSAQLTSTRLR-RNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITA-IELGDGDPPLAD  231 (286)
T ss_pred             hEEECCCCCEEEccCCceeecccCCCc-cccccCCCcccChhhhchhhhccccccchhhhhhHHHHH-HHHhcCCCCCCC
Confidence            999999999999999987665432221 122357788999998753     4578899999999999 999999999875


Q ss_pred             CC
Q 031436          151 ED  152 (159)
Q Consensus       151 ~~  152 (159)
                      .+
T Consensus       232 ~~  233 (286)
T cd06638         232 LH  233 (286)
T ss_pred             Cc
Confidence            53

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.93  E-value=2e-26  Score=164.14  Aligned_cols=142  Identities=21%  Similarity=0.327  Sum_probs=116.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.++...++|+||+. ++|.+.+....    ..+++..+..++.|++.|+.|||   +++++|+||+|+||+++
T Consensus        66 ~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~----~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~  137 (291)
T cd07844          66 VTLHDIIHTKKTLTLVFEYLD-TDLKQYMDDCG----GGLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLIS  137 (291)
T ss_pred             eeEEEEEecCCeEEEEEecCC-CCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEc
Confidence            467888998899999999997 59988876542    35788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.++++|||.+.......... ....++..|+|||.+.+ ..++.++|+||+|+++ ++|++|+.||.+.+
T Consensus       138 ~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il-~~l~~g~~~~~~~~  208 (291)
T cd07844         138 ERGELKLADFGLARAKSVPSKTY-SNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIF-YEMATGRPLFPGST  208 (291)
T ss_pred             CCCCEEECccccccccCCCCccc-cccccccccCCcHHhhcCcccCcHHHHHHHHHHH-HHHHhCCCCCCCCc
Confidence            99999999999876543222111 11234677999999875 4578999999999999 99999999997654

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.93  E-value=1.6e-26  Score=164.23  Aligned_cols=142  Identities=25%  Similarity=0.349  Sum_probs=116.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++..++..++++||+.++.+.......     ..++...+..++.|++.++.+||   ..+++|+|++|.||+++
T Consensus        63 ~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~  134 (288)
T cd07833          63 VNLKEAFRRKGRLYLVFEYVERTLLELLEASP-----GGLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVS  134 (288)
T ss_pred             eehhheEEECCEEEEEEecCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEC
Confidence            35678888888899999999876565444332     34788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .+..++++|||.+...............++..|+|||.+.+. .++.++|+||||+++ +++++|+.||.+.
T Consensus       135 ~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l-~~l~~g~~~~~~~  205 (288)
T cd07833         135 ESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIM-AELLDGEPLFPGD  205 (288)
T ss_pred             CCCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHH-HHHHhCCCCCCCC
Confidence            999999999998776654332122234567789999999887 789999999999999 9999999999754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.93  E-value=1.2e-26  Score=166.47  Aligned_cols=143  Identities=24%  Similarity=0.374  Sum_probs=116.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      ++++|.|.+ ...++++||+++|+|.+.+....    ..++...+..++.|++.|+.|||   +++++|+|++|.||+++
T Consensus        72 v~~~~~~~~-~~~~~v~e~~~~g~l~~~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~  143 (303)
T cd05110          72 VRLLGVCLS-PTIQLVTQLMPHGCLLDYVHEHK----DNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVK  143 (303)
T ss_pred             ccEEEEEcC-CCceeeehhcCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHh---hcCeeccccccceeeec
Confidence            467888865 45678999999999999886532    35678888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCccee-eeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRI-RGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..+|++|||.+.......... .....++..|+|||.+.+..++.++|+||||+++ |++++ |..||.+..
T Consensus       144 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l-~el~t~g~~p~~~~~  216 (303)
T cd05110         144 SPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTI-WELMTFGGKPYDGIP  216 (303)
T ss_pred             CCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHH-HHHHhCCCCCCCCCC
Confidence            88899999999887654322211 1112235679999999888899999999999999 99886 899997654

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.93  E-value=1.6e-26  Score=164.50  Aligned_cols=142  Identities=26%  Similarity=0.339  Sum_probs=117.8

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++++.+..+...++++||+++|+|.+.+...     ..+++..+..++.|++.++.+||   +.+++|+|++|.||+++.
T Consensus        69 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~  140 (288)
T cd05583          69 TLHYAFQTDTKLHLILDYVNGGELFTHLYQR-----EHFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDS  140 (288)
T ss_pred             hhheeeecCCEEEEEEecCCCCcHHHHHhhc-----CCcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECC
Confidence            4566777788899999999999999887643     34778888889999999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCC--CCCCcceEeccccccCcceecccccccCC
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD--CNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~--~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +..++++|||++...............++..|++||...+..  .+.++|+||||+++ +++++|..||...+
T Consensus       141 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il-~el~tg~~p~~~~~  212 (288)
T cd05583         141 EGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLT-FELLTGASPFTVDG  212 (288)
T ss_pred             CCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHH-HHHHhCCCCcccCc
Confidence            999999999987765443322222345678899999987655  78899999999999 99999999996543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.93  E-value=1.6e-26  Score=164.21  Aligned_cols=145  Identities=24%  Similarity=0.380  Sum_probs=117.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+..++.+++++||+++++|.+.+....  ....+++..+..++.|++.++.|||+  +.+++|+||+|+||+++
T Consensus        62 ~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~  137 (286)
T cd06622          62 VDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGV--ATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVN  137 (286)
T ss_pred             HhhhhheecCCeEEEEEeecCCCCHHHHHHhcc--ccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEEC
Confidence            356777888889999999999999988876531  12468889999999999999999993  25899999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCC------CCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD------CNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~------~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+..++++|||.+........   ....++..|+|||.+.+..      ++.++|+||+|+++ +++++|+.||...+.
T Consensus       138 ~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il-~~l~~g~~pf~~~~~  212 (286)
T cd06622         138 GNGQVKLCDFGVSGNLVASLA---KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSI-LEMALGRYPYPPETY  212 (286)
T ss_pred             CCCCEEEeecCCcccccCCcc---ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHH-HHHHhCCCCCCCcch
Confidence            999999999998765533221   1224567899999986543      47899999999999 999999999976543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.93  E-value=7.6e-27  Score=171.52  Aligned_cols=141  Identities=21%  Similarity=0.235  Sum_probs=120.7

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      +++-.|.+.+++|+|+|-+. .+|..+++..+..  -.+....+..|+.|+..||++|-   .++++|.||||.|||+..
T Consensus       498 rl~r~F~hknHLClVFE~Ls-lNLRevLKKyG~n--vGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE  571 (752)
T KOG0670|consen  498 RLFRHFKHKNHLCLVFEPLS-LNLREVLKKYGRN--VGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNE  571 (752)
T ss_pred             HHHHHhhhcceeEEEehhhh-chHHHHHHHhCcc--cceeehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEecc
Confidence            45567788999999999994 7999999875432  34777888899999999999999   899999999999999986


Q ss_pred             C-CceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           82 Q-SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        82 ~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      . ..+||+|||.+.....+..   +.+.-+.+|.|||++.|.+|+...|+||+||++ ||+.||+..|+|..
T Consensus       572 ~k~iLKLCDfGSA~~~~enei---tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctL-YElYtGkIlFpG~T  639 (752)
T KOG0670|consen  572 SKNILKLCDFGSASFASENEI---TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTL-YELYTGKILFPGRT  639 (752)
T ss_pred             CcceeeeccCccccccccccc---cHHHHHHhccCcceeecCcccCCccceeeceee-EEeeccceecCCCC
Confidence            5 4689999998877765443   234567889999999999999999999999999 99999999999864

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.93  E-value=3.6e-26  Score=162.86  Aligned_cols=146  Identities=23%  Similarity=0.289  Sum_probs=116.0

Q ss_pred             CeEEEEEecC-----CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC
Q 031436            1 MRLIGCCLET-----ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS   75 (159)
Q Consensus         1 v~l~~~~~~~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~   75 (159)
                      ++++++|...     +.+++++||+++++|.+.+..... ....+++..+..++.|++.++.+||   +.+++|+|++|.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~  157 (291)
T cd06639          82 VKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLI-CGQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKGN  157 (291)
T ss_pred             EEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhh-cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHH
Confidence            3567777643     357999999999999988764221 1145788889999999999999999   899999999999


Q ss_pred             CEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-----CCCCCcceEeccccccCcceeccccccc
Q 031436           76 NILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-----DCNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        76 nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-----~~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      ||+++.+..++++|||.+.......... ....++..|+|||.+...     .++.++|+||||+++ |++++|+.||..
T Consensus       158 nili~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~-~el~~g~~p~~~  235 (291)
T cd06639         158 NILLTTEGGVKLVDFGVSAQLTSTRLRR-NTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITA-IELGDGDPPLFD  235 (291)
T ss_pred             HEEEcCCCCEEEeecccchhcccccccc-cCccCCccccChhhhcCCCCcccccCCccchHHHHHHH-HHHhhCCCCCCC
Confidence            9999999999999999877654322211 123467789999987543     368999999999999 999999999976


Q ss_pred             CC
Q 031436          151 ED  152 (159)
Q Consensus       151 ~~  152 (159)
                      .+
T Consensus       236 ~~  237 (291)
T cd06639         236 MH  237 (291)
T ss_pred             Cc
Confidence            54

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.93  E-value=2.3e-26  Score=163.68  Aligned_cols=147  Identities=29%  Similarity=0.458  Sum_probs=118.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCC-----------------CCCCccchhhHHHHHHHHHHHHHHhhhcC
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ-----------------PNFEPVTCSLRLKIAMEIAYGIAYLHVAF   63 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-----------------~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   63 (159)
                      ++++++|.++...++++||+++|+|.+.+.....                 .+...+++..+..++.|++.++.++|   
T Consensus        71 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---  147 (288)
T cd05050          71 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---  147 (288)
T ss_pred             heEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---
Confidence            4678899998999999999999999998864321                 11134677888899999999999999   


Q ss_pred             CCCeEEecCCCCCEEecCCCceEEEecCCCcccCCCcce-eeeeecccccccCccccccCCCCCCcceEeccccccCcce
Q 031436           64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR-IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHL  142 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~  142 (159)
                      .++++|+|++|.||+++.+..++++|||.+......... .......+..|+|||...+..++.++|+||||+++ |+|+
T Consensus       148 ~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il-~el~  226 (288)
T cd05050         148 ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVL-WEIF  226 (288)
T ss_pred             hCCeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHH-HHHH
Confidence            899999999999999999999999999987654332211 11122345679999999888899999999999999 9998


Q ss_pred             e-cccccccC
Q 031436          143 T-GRAWYRSE  151 (159)
Q Consensus       143 ~-g~~p~~~~  151 (159)
                      + |..||.+.
T Consensus       227 ~~~~~p~~~~  236 (288)
T cd05050         227 SYGMQPYYGM  236 (288)
T ss_pred             hCCCCCCCCC
Confidence            7 88888544

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.93  E-value=6.4e-27  Score=163.83  Aligned_cols=141  Identities=30%  Similarity=0.469  Sum_probs=121.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+.+..+++||++.+++|.+.+...     ..++...+..++.|++.++.+||   +.+++|+||+|.||+++
T Consensus        61 ~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~  132 (260)
T PF00069_consen   61 VQILDVFQDDNYLYIVMEYCPGGSLQDYLQKN-----KPLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPENILLD  132 (260)
T ss_dssp             CHEEEEEEESSEEEEEEEEETTEBHHHHHHHH-----SSBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEES
T ss_pred             cccccccccccccccccccccccccccccccc-----ccccccccccccccccccccccc---ccccccccccccccccc
Confidence            45788888889999999999988999988732     56789999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccc-cCCCCCCcceEeccccccCcceecccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA-TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~-~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .+..++++|||.+........ ......++..|+|||... +..++.++|+||+|+++ ++|++|..||...
T Consensus       133 ~~~~~~l~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il-~~l~~~~~p~~~~  202 (260)
T PF00069_consen  133 ENGEVKLIDFGSSVKLSENNE-NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIIL-YELLTGKLPFEES  202 (260)
T ss_dssp             TTSEEEESSGTTTEESTSTTS-EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHH-HHHHHSSSSSTTS
T ss_pred             ccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccc-ccccccccccccc
Confidence            999999999998865322221 222345678899999998 78899999999999999 9999999999876

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.93  E-value=2.7e-26  Score=161.00  Aligned_cols=142  Identities=25%  Similarity=0.416  Sum_probs=122.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCC-CCeEEecCCCCCEEe
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS-RPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~-~~~~h~~l~~~nil~   79 (159)
                      +++++.+..++.+++++||+++++|.+.+...     ..++...+..++.|++.++.++|   + .+++|+|++|.||++
T Consensus        62 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~  133 (264)
T cd06623          62 VKCYGAFYKEGEISIVLEYMDGGSLADLLKKV-----GKIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLI  133 (264)
T ss_pred             eeEEEEEccCCeEEEEEEecCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEE
Confidence            46788888889999999999999999998654     45788899999999999999999   8 999999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           80 QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +.+..++++|||.+.......... ....++..|+|||...+..++.++|+||||+++ |++++|+.||...+
T Consensus       134 ~~~~~~~l~df~~~~~~~~~~~~~-~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il-~~l~tg~~p~~~~~  204 (264)
T cd06623         134 NSKGEVKIADFGISKVLENTLDQC-NTFVGTVTYMSPERIQGESYSYAADIWSLGLTL-LECALGKFPFLPPG  204 (264)
T ss_pred             CCCCCEEEccCccceecccCCCcc-cceeecccccCHhhhCCCCCCchhhHHHHHHHH-HHHHhCCCCCcccc
Confidence            999999999999887664433221 123467789999999888899999999999999 99999999997764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.93  E-value=3e-26  Score=160.87  Aligned_cols=142  Identities=27%  Similarity=0.431  Sum_probs=118.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+...+..++++||+++++|.+.+...     ..+++.....++.|++.++.+||   +.+++|+||+|.||+++
T Consensus        62 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~  133 (264)
T cd06626          62 VKYYGVEVHREKVYIFMEYCSGGTLEELLEHG-----RILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLD  133 (264)
T ss_pred             hheeeeEecCCEEEEEEecCCCCcHHHHHhhc-----CCCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEC
Confidence            35778888888999999999999999988653     34677888889999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceee---eeecccccccCccccccCC---CCCCcceEeccccccCcceecccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIR---GRVMGTFGYLPPEYIATGD---CNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~---~~~~~~~~~~ape~~~~~~---~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .+..++++|||.+...........   ....++..|++||.+.+..   ++.++|+||||+++ +++++|..||...
T Consensus       134 ~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il-~~l~~g~~pf~~~  209 (264)
T cd06626         134 HNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVV-LEMATGKRPWSEL  209 (264)
T ss_pred             CCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHH-HHHHhCCCCccCC
Confidence            999999999998776543322111   1234567899999998766   88999999999999 9999999999754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.93  E-value=6.2e-26  Score=160.77  Aligned_cols=148  Identities=21%  Similarity=0.377  Sum_probs=119.6

Q ss_pred             CeEEEEEec-CCCceEEEEecCCCChHHHhhCCCCC---CCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCC
Q 031436            1 MRLIGCCLE-TENPVLVFEYVEYGTLADRIYHPRQP---NFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSN   76 (159)
Q Consensus         1 v~l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~n   76 (159)
                      +++++++.+ +...++++||+++++|.+.+......   ....++...+..++.|++.|+.|||   +.+++|+|++|.|
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~n  147 (280)
T cd05043          71 LPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARN  147 (280)
T ss_pred             CeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhh
Confidence            467787766 46788999999999999988653221   1245788889999999999999999   8999999999999


Q ss_pred             EEecCCCceEEEecCCCcccCCCccee-eeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           77 ILFQEQSVAKLFDFSYSESIPEGETRI-RGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        77 il~~~~~~~~l~d~~~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      ++++.+..+|++|||+++......... .....++..|+|||.+.+..++.++|+||||+++ +++++ |+.||...+
T Consensus       148 il~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l-~el~~~g~~p~~~~~  224 (280)
T cd05043         148 CVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLL-WELMTLGQTPYVEID  224 (280)
T ss_pred             EEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHH-HHHhcCCCCCcCcCC
Confidence            999999999999999987654332211 1122345679999999888899999999999999 99998 999997643

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.93  E-value=4e-26  Score=159.50  Aligned_cols=145  Identities=29%  Similarity=0.450  Sum_probs=120.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+.+++..+++|||+++++|.+.+.....   ..+++.....++.|++.++.+||   +.+++|+|++|.||+++
T Consensus        64 ~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~  137 (258)
T smart00219       64 VKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRP---KELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVG  137 (258)
T ss_pred             heEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhh---ccCCHHHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEc
Confidence            4678889888999999999999999998875431   22788999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..++++|||.+...............++..|++||.+.+..++.++|+||+|+++ +++++ |+.||...+
T Consensus       138 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~-~~l~~~g~~p~~~~~  209 (258)
T smart00219      138 ENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLL-WEIFTLGESPYPGMS  209 (258)
T ss_pred             cCCeEEEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHH-HHHHhCCCCCCCCCC
Confidence            999999999998876544322111112356789999999888899999999999999 99987 889987643

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.93  E-value=2.6e-26  Score=160.55  Aligned_cols=141  Identities=25%  Similarity=0.350  Sum_probs=119.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+..++..++++||+++++|.+.+...     ..+++.....++.|++.++.+||   +.+++|+|++|.||+++
T Consensus        65 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~  136 (258)
T cd06632          65 VQYLGTEREEDNLYIFLELVPGGSLAKLLKKY-----GSFPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVD  136 (258)
T ss_pred             hheeeeEecCCeEEEEEEecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEC
Confidence            46788888889999999999999999988653     34778888889999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCC-CCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD-CNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..+|++|||.+.......  ......++..|++||.+.... ++.++|+||||+++ +++++|+.||...+
T Consensus       137 ~~~~~kl~d~~~~~~~~~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l-~~l~~g~~pf~~~~  206 (258)
T cd06632         137 TNGVVKLADFGMAKQVVEFS--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTV-LEMATGKPPWSQLE  206 (258)
T ss_pred             CCCCEEEccCccceeccccc--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHH-HHHHhCCCCcccCc
Confidence            99999999999876654332  112334677899999987766 89999999999999 99999999996543

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.93  E-value=3.9e-26  Score=168.50  Aligned_cols=140  Identities=19%  Similarity=0.273  Sum_probs=115.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+|+++-..++.+|+||||-+ -+|.+.+.....    ..+.-.+..+..|++.++.++|   ..|++|.||||.|.|+.
T Consensus       423 IqL~DYEv~d~~lYmvmE~Gd-~DL~kiL~k~~~----~~~~~~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlV  494 (677)
T KOG0596|consen  423 IQLYDYEVTDGYLYMVMECGD-IDLNKILKKKKS----IDPDWFLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLV  494 (677)
T ss_pred             EEEeeeeccCceEEEEeeccc-ccHHHHHHhccC----CCchHHHHHHHHHHHHHHHHHH---HhceeecCCCcccEEEE
Confidence            467777778899999999995 599998876432    2222367889999999999999   99999999999999985


Q ss_pred             CCCceEEEecCCCcccCCCcce-eeeeecccccccCccccccCC-----------CCCCcceEeccccccCcceeccccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETR-IRGRVMGTFGYLPPEYIATGD-----------CNEKCDVYSFDGSRDSGHLTGRAWY  148 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~-----------~~~~~DvwS~g~~~~~~~~~g~~p~  148 (159)
                      + +.+|++|||.+..+..+... ......||..||+||.+..+.           .++++||||+||++ |+|+.|++||
T Consensus       495 k-G~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCIL-YqMvYgktPf  572 (677)
T KOG0596|consen  495 K-GRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCIL-YQMVYGKTPF  572 (677)
T ss_pred             e-eeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHH-HHHHhcCCch
Confidence            5 67999999999988765532 334567999999999985432           56899999999999 9999999999


Q ss_pred             cc
Q 031436          149 RS  150 (159)
Q Consensus       149 ~~  150 (159)
                      ..
T Consensus       573 ~~  574 (677)
T KOG0596|consen  573 GQ  574 (677)
T ss_pred             HH
Confidence            64

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=5.1e-26  Score=160.05  Aligned_cols=142  Identities=27%  Similarity=0.351  Sum_probs=116.3

Q ss_pred             CeEEEEEecC--CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLET--ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      +++++.+.+.  +.+++++||+++++|.+.+...     ..++......++.|++.++.+||   +++++|+|++|.||+
T Consensus        67 ~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-----~~l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~  138 (264)
T cd06653          67 VQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAY-----GALTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANIL  138 (264)
T ss_pred             ceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEE
Confidence            3567777653  4578999999999999988653     34678888899999999999999   899999999999999


Q ss_pred             ecCCCceEEEecCCCcccCCCcc--eeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           79 FQEQSVAKLFDFSYSESIPEGET--RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        79 ~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      ++.+..++++|||++........  .......++..|+|||.+.+..++.++|+||||+++ +++++|+.||...
T Consensus       139 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~g~~p~~~~  212 (264)
T cd06653         139 RDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTV-VEMLTEKPPWAEY  212 (264)
T ss_pred             EcCCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHH-HHHHhCCCCCCcc
Confidence            99999999999998875532111  111123467789999999888899999999999999 9999999999754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.93  E-value=1.4e-25  Score=158.90  Aligned_cols=144  Identities=23%  Similarity=0.383  Sum_probs=118.0

Q ss_pred             CeEEEEEec--CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLE--TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      +++++++..  +...++++||+++++|.+.+....    ..+++..+..++.|++.|+.+||   +++++|+|++|.||+
T Consensus        69 ~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~----~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil  141 (284)
T cd05038          69 VKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHR----DQINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNIL  141 (284)
T ss_pred             heEEeeeecCCCCceEEEEecCCCCCHHHHHHhCc----cccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEE
Confidence            356777766  557899999999999999986542    35788889999999999999999   899999999999999


Q ss_pred             ecCCCceEEEecCCCcccCCCcce--eeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           79 FQEQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        79 ~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ++.+..++++|||.+.........  ......++..|++||...+..++.++|+||||+++ +++++|+.|+....
T Consensus       142 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l-~el~tg~~p~~~~~  216 (284)
T cd05038         142 VESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTL-YELFTYGDPSQSPP  216 (284)
T ss_pred             EcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhh-heeeccCCCccccc
Confidence            999999999999988766532211  11112334569999999888899999999999999 99999999986643

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.93  E-value=1.5e-26  Score=162.22  Aligned_cols=142  Identities=27%  Similarity=0.359  Sum_probs=118.2

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++++.+..++..++++||+++++|.+.+...     ..+++..+..++.|++.++.++|   +.+++|+|++|+||+++.
T Consensus        57 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~  128 (265)
T cd05579          57 KLYYSFQGKKNLYLVMEYLPGGDLASLLENV-----GSLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDS  128 (265)
T ss_pred             HHHHheecCcEEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcC
Confidence            3456677788899999999999999988754     35788889999999999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcc-------eeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           82 QSVAKLFDFSYSESIPEGET-------RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~-------~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +..++++|||++........       .......++..|++||.......+.++|+||||+++ +++++|+.||...+
T Consensus       129 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~-~~l~~g~~p~~~~~  205 (265)
T cd05579         129 NGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCIL-YEFLVGIPPFHGET  205 (265)
T ss_pred             CCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHH-HHHHhCCCCCCCCC
Confidence            99999999998765433211       011223456789999999888899999999999999 99999999997654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.93  E-value=2.9e-26  Score=163.76  Aligned_cols=141  Identities=21%  Similarity=0.376  Sum_probs=119.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+..++..++++||+++++|.+.+..      ..+++..+..++.|++.++.++|   +.+++|+|++|.||+++
T Consensus        80 v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~------~~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~  150 (292)
T cd06657          80 VEMYNSYLVGDELWVVMEFLEGGALTDIVTH------TRMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLT  150 (292)
T ss_pred             hheeeEEEeCCEEEEEEecCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEC
Confidence            3567888888999999999999999887643      34678888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||++......... .....++..|++||.+.+..++.++|+||+|+++ +++++|..||.+.+
T Consensus       151 ~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil-~el~tg~~p~~~~~  220 (292)
T cd06657         151 HDGRVKLSDFGFCAQVSKEVPR-RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMV-IEMVDGEPPYFNEP  220 (292)
T ss_pred             CCCCEEEcccccceeccccccc-ccccccCccccCHHHhcCCCCCchhhHHHHHHHH-HHHHhCCCCCCCCC
Confidence            9999999999987655432221 1223567789999999888889999999999999 99999999997654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.93  E-value=2.9e-26  Score=164.85  Aligned_cols=149  Identities=24%  Similarity=0.325  Sum_probs=118.4

Q ss_pred             CeEEEEEecC--CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLET--ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      +++++++.+.  ...++|+||+. +++.+.+..........++...+..++.|++.|+.|||   +.+++|+||+|+||+
T Consensus        65 ~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil  140 (316)
T cd07842          65 VSLVEVFLEHADKSVYLLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKPANIL  140 (316)
T ss_pred             cceEEEEeCCCCceEEEEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEE
Confidence            4678888877  77899999996 57877765433222246788889999999999999999   899999999999999


Q ss_pred             ecC----CCceEEEecCCCcccCCCcc--eeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccC
Q 031436           79 FQE----QSVAKLFDFSYSESIPEGET--RIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        79 ~~~----~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      ++.    ++.+|++|||++........  .......++..|+|||.+.+. .++.++|+||||+++ +++++|+.||.+.
T Consensus       141 ~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l-~~l~~~~~~~~~~  219 (316)
T cd07842         141 VMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIF-AELLTLEPIFKGR  219 (316)
T ss_pred             EcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHH-HHHHhcCCCCcCC
Confidence            998    88999999998776543221  111123457789999988764 578999999999999 9999999999876


Q ss_pred             CCc
Q 031436          152 DWK  154 (159)
Q Consensus       152 ~~~  154 (159)
                      +.+
T Consensus       220 ~~~  222 (316)
T cd07842         220 EAK  222 (316)
T ss_pred             ccc
Confidence            544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.93  E-value=4.2e-26  Score=159.45  Aligned_cols=143  Identities=23%  Similarity=0.328  Sum_probs=119.3

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++++.+..++..++++||+++++|.+.+.....   ..+++..+..++.|++.++.++|   +++++|+|++|.||+++.
T Consensus        63 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~  136 (256)
T cd08220          63 EYYENFLEDKALMIVMEYAPGGTLAEYIQKRCN---SLLDEDTILHFFVQILLALHHVH---TKLILHRDLKTQNILLDK  136 (256)
T ss_pred             heeeeEecCCEEEEEEecCCCCCHHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcC
Confidence            467777788889999999999999998865432   45788888999999999999999   899999999999999985


Q ss_pred             C-CceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           82 Q-SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        82 ~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      + ..++++|||.+.........  ....++..|+|||.+.+..++.++|+||||+++ +++++|+.||...+.
T Consensus       137 ~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l-~~l~~~~~~~~~~~~  206 (256)
T cd08220         137 HKMVVKIGDFGISKILSSKSKA--YTVVGTPCYISPELCEGKPYNQKSDIWALGCVL-YELASLKRAFEAANL  206 (256)
T ss_pred             CCCEEEEccCCCceecCCCccc--cccccCCcccCchhccCCCCCcccchHHHHHHH-HHHHhCCCCcccCch
Confidence            5 45799999988766443221  123467789999999888899999999999999 999999999977653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.93  E-value=3.7e-26  Score=160.54  Aligned_cols=147  Identities=26%  Similarity=0.375  Sum_probs=121.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+..++..++++|++++++|.+.+.....  ...+++..+..++.|++.++.+||   +.+++|+|++|.||+++
T Consensus        62 ~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~  136 (267)
T cd06610          62 VKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYP--RGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLG  136 (267)
T ss_pred             EEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEc
Confidence            3567888888999999999999999999865321  135788888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcce---eeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETR---IRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+..++++|||.+.........   ......++..|++||.+... .++.++|+||||+++ ++|++|+.||...+.
T Consensus       137 ~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~-~~l~~g~~p~~~~~~  212 (267)
T cd06610         137 EDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITA-IELATGAAPYSKYPP  212 (267)
T ss_pred             CCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHH-HHHHhCCCCccccCh
Confidence            9999999999987665443221   11233467789999998766 789999999999999 999999999976543

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.93  E-value=1.4e-26  Score=162.64  Aligned_cols=139  Identities=30%  Similarity=0.462  Sum_probs=118.8

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCC-CCeEEecCCCCCEEec
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS-RPIVFRNVKPSNILFQ   80 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~-~~~~h~~l~~~nil~~   80 (159)
                      ++++.+..++..++++||+.+++|.+.+....    ..++...+..++.|++.++.++|   + .+++|+||+|.||+++
T Consensus        63 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~  135 (265)
T cd06605          63 GFYGAFYNNGDISICMEYMDGGSLDKILKEVQ----GRIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKPSNILVN  135 (265)
T ss_pred             hhheeeecCCEEEEEEEecCCCcHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCHHHEEEC
Confidence            45678888889999999999899999886542    45778888899999999999999   7 9999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .++.++++|||.+.........   ...++..|++||.+.+..++.++|+||||+++ +++++|+.||...
T Consensus       136 ~~~~~~l~d~g~~~~~~~~~~~---~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l-~~l~~g~~p~~~~  202 (265)
T cd06605         136 SRGQIKLCDFGVSGQLVNSLAK---TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSL-IELATGRFPYPPE  202 (265)
T ss_pred             CCCCEEEeecccchhhHHHHhh---cccCChhccCHHHHcCCCCCchhhHHHHHHHH-HHHHhCCCCCCcc
Confidence            9999999999987654322111   14567789999999888999999999999999 9999999999765

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.93  E-value=6.2e-26  Score=161.80  Aligned_cols=146  Identities=18%  Similarity=0.273  Sum_probs=115.2

Q ss_pred             CeEEEEEecCCC-----ceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC
Q 031436            1 MRLIGCCLETEN-----PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS   75 (159)
Q Consensus         1 v~l~~~~~~~~~-----~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~   75 (159)
                      +++++++...+.     .++++||+++ +|.+.+..........+++..+..++.|++.|+.|||   +.+++|+|++|.
T Consensus        64 ~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~  139 (295)
T cd07837          64 VRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQ  139 (295)
T ss_pred             cceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChH
Confidence            356777766554     7999999974 8888876543322356788999999999999999999   899999999999


Q ss_pred             CEEecC-CCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCC
Q 031436           76 NILFQE-QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        76 nil~~~-~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ||+++. +..++++|||.+.......... ....++..|+|||.+.+ ..++.++|+||||+++ |+|++|..||.+.+
T Consensus       140 nil~~~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l-~~l~~g~~~~~~~~  216 (295)
T cd07837         140 NLLVDKQKGLLKIADLGLGRAFSIPVKSY-THEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIF-AEMSRKQPLFPGDS  216 (295)
T ss_pred             HEEEecCCCeEEEeecccceecCCCcccc-CCcccccCCCChHHhhCCCCCCchHHHHHHHHHH-HHHHcCCCCCCCCC
Confidence            999998 7889999999877553322111 11234677999998865 4578999999999999 99999999997653

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.93  E-value=4.9e-26  Score=162.19  Aligned_cols=141  Identities=21%  Similarity=0.298  Sum_probs=114.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++.+++..+...++++||+. +++.+.+....    ..+++..+..++.|++.|+.|||   +.+++|+||+|+||+++
T Consensus        66 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~  137 (291)
T cd07870          66 VLLHDIIHTKETLTFVFEYMH-TDLAQYMIQHP----GGLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLIS  137 (291)
T ss_pred             eEEEEEEecCCeEEEEEeccc-CCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEc
Confidence            457888888889999999995 68877665432    34667778889999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .++.++++|||++.......... ....++..|+|||.+.+. .++.++|+||||+++ +++++|+.||.+.
T Consensus       138 ~~~~~~l~Dfg~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l-~~l~~g~~~f~~~  207 (291)
T cd07870         138 YLGELKLADFGLARAKSIPSQTY-SSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIF-IEMLQGQPAFPGV  207 (291)
T ss_pred             CCCcEEEeccccccccCCCCCCC-CCccccccccCCceeecCCCCCcHHHHHHHHHHH-HHHHhCCCCCCCc
Confidence            99999999999876543322111 122457789999998764 478899999999999 9999999999754

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.93  E-value=7e-26  Score=160.45  Aligned_cols=140  Identities=23%  Similarity=0.319  Sum_probs=115.7

Q ss_pred             CeEEEEEecC--CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLET--ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      +++++++.++  +.+++++||+. +++.+.+....    ..+++..+..++.|++.|+.+||   +.+++|+|++|.||+
T Consensus        61 ~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~----~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~  132 (282)
T cd07831          61 LRLIEVLFDRKTGRLALVFELMD-MNLYELIKGRK----RPLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENIL  132 (282)
T ss_pred             cceEEEEecCCCCcEEEEEecCC-ccHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEE
Confidence            4678888877  88999999996 58888776532    45788899999999999999999   899999999999999


Q ss_pred             ecCCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCC
Q 031436           79 FQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        79 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ++. +.++++|||.+.........  ....++..|+|||.+.. ..++.++|+||+|+++ ++|++|..||++.+
T Consensus       133 l~~-~~~kl~dfg~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l-~el~~~~~p~~~~~  203 (282)
T cd07831         133 IKD-DILKLADFGSCRGIYSKPPY--TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVF-FEILSLFPLFPGTN  203 (282)
T ss_pred             EcC-CCeEEEecccccccccCCCc--CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHH-HHHHcCCcCCCCCC
Confidence            999 99999999988765432221  12346778999997644 4578899999999999 99999999998764

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=5.4e-26  Score=160.23  Aligned_cols=145  Identities=25%  Similarity=0.351  Sum_probs=116.1

Q ss_pred             CeEEEEEecCC------CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCLETE------NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~~~------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      +++++.+....      .+++++||+++++|.+.+..... ....++...+..++.|++.|+.|||   +.+++|+|++|
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p  141 (275)
T cd06608          66 ATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRK-KGKRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKG  141 (275)
T ss_pred             heEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCH
Confidence            46778886544      37999999999999988765321 1146788889999999999999999   89999999999


Q ss_pred             CCEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-----CCCCCCcceEeccccccCcceecccccc
Q 031436           75 SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-----GDCNEKCDVYSFDGSRDSGHLTGRAWYR  149 (159)
Q Consensus        75 ~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-----~~~~~~~DvwS~g~~~~~~~~~g~~p~~  149 (159)
                      .||+++.+..++++|||.+......... .....++..|+|||.+..     ..++.++|+||+|+++ +++++|+.||.
T Consensus       142 ~ni~~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il-~~l~~g~~p~~  219 (275)
T cd06608         142 QNILLTKNAEVKLVDFGVSAQLDSTLGR-RNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITA-IELADGKPPLC  219 (275)
T ss_pred             HHEEEccCCeEEECCCccceecccchhh-hcCccccccccCHhHhcccccccCCccccccHHHhHHHH-HHHHhCCCCcc
Confidence            9999999999999999987655432221 122346778999998753     3467889999999999 99999999997


Q ss_pred             cC
Q 031436          150 SE  151 (159)
Q Consensus       150 ~~  151 (159)
                      ..
T Consensus       220 ~~  221 (275)
T cd06608         220 DM  221 (275)
T ss_pred             cc
Confidence            54

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.93  E-value=9.7e-26  Score=156.74  Aligned_cols=140  Identities=26%  Similarity=0.435  Sum_probs=121.4

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++++.+..++..++++||+++++|.+.+....    ..+++..+..++.|++.++.++|   ..+++|+|++|.||+++.
T Consensus        61 ~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~  133 (253)
T cd05122          61 KYYGSYLKKDELWIVMEFCSGGSLKDLLKSTN----QTLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTS  133 (253)
T ss_pred             EEEEEEecCCeEEEEEecCCCCcHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEcc
Confidence            57788888889999999999999999886542    45788889999999999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      +..++++|||.+........  .....++..|++||.+.+..++.++|+||||+++ +++++|+.||...
T Consensus       134 ~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il-~~l~~g~~p~~~~  200 (253)
T cd05122         134 DGEVKLIDFGLSAQLSDTKA--RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITA-IELAEGKPPYSEL  200 (253)
T ss_pred             CCeEEEeecccccccccccc--ccceecCCcccCHHHHcCCCCCccccHHHHHHHH-HHHHhCCCCCCCC
Confidence            99999999998776644321  2234567889999999888899999999999999 9999999999876

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.93  E-value=2.6e-26  Score=160.86  Aligned_cols=140  Identities=26%  Similarity=0.359  Sum_probs=119.0

Q ss_pred             EEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCC
Q 031436            3 LIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQ   82 (159)
Q Consensus         3 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~   82 (159)
                      +++.+.++...++++||+.+++|.+.+...     ..+++..+..++.|++.++.+||   +++++|+||+|.||+++.+
T Consensus        65 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~  136 (258)
T cd05578          65 LWYSFQDEENMYLVVDLLLGGDLRYHLSQK-----VKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQ  136 (258)
T ss_pred             HHHhhcCCCeEEEEEeCCCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCC
Confidence            345667778899999999999999988653     35778889999999999999999   8999999999999999999


Q ss_pred             CceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           83 SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        83 ~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      ..++++|||.+........  .....++..|++||.+.+..++.++|+||+|+++ |++++|..||...+.
T Consensus       137 ~~~~l~d~~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l-~~l~~g~~p~~~~~~  204 (258)
T cd05578         137 GHVHITDFNIATKVTPDTL--TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTA-YECLRGKRPYRGHSR  204 (258)
T ss_pred             CCEEEeecccccccCCCcc--ccccCCChhhcCHHHHcccCCCCcccchhhHHHH-HHHHhCCCCCCCCCc
Confidence            9999999998766543321  1223467789999999888899999999999999 999999999987663

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.93  E-value=7e-26  Score=159.60  Aligned_cols=142  Identities=24%  Similarity=0.356  Sum_probs=115.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCcc--chhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPV--TCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      |++++++..++..++++||+++++|.+.+....    ..+  +...+..++.|++.|+.|||   +++++|+|++|.||+
T Consensus        68 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil  140 (268)
T cd06624          68 VQYLGSDSENGFFKIFMEQVPGGSLSALLRSKW----GPLKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVL  140 (268)
T ss_pred             eeeeeeeccCCEEEEEEecCCCCCHHHHHHHhc----ccCCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEE
Confidence            467888998899999999999999999886532    223  66777888999999999999   899999999999999


Q ss_pred             ecC-CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCC--CCCCcceEeccccccCcceecccccccC
Q 031436           79 FQE-QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD--CNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        79 ~~~-~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~--~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      ++. ...++++|||.+........ ......++..|+|||.+....  ++.++|+||||+++ +++++|+.||...
T Consensus       141 ~~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl-~~l~~g~~p~~~~  214 (268)
T cd06624         141 VNTYSGVVKISDFGTSKRLAGINP-CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTI-VEMATGKPPFIEL  214 (268)
T ss_pred             EcCCCCeEEEecchhheecccCCC-ccccCCCCccccChhhhccccccCCchhhhHHHHHHH-HHHHhCCCCCccc
Confidence            976 56899999998765533221 112234678899999986543  78999999999999 9999999999654

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.93  E-value=7.4e-26  Score=160.90  Aligned_cols=143  Identities=26%  Similarity=0.414  Sum_probs=121.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+...+..++++||+++++|.+.+....    ..++...+..++.|++.++.++|   +.+++|+|++|.||+++
T Consensus        78 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~  150 (286)
T cd06614          78 VDYYDSYLVGDELWVVMEYMDGGSLTDIITQNF----VRMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLS  150 (286)
T ss_pred             eEEEEEEEECCEEEEEEeccCCCcHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEc
Confidence            467888888899999999999999999987642    36788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.++++|||.+......... .....++..|++||.+.+..++.++|+||||+++ |++++|+.||...+
T Consensus       151 ~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil-~~l~~g~~p~~~~~  220 (286)
T cd06614         151 KDGSVKLADFGFAAQLTKEKSK-RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMC-IEMAEGEPPYLREP  220 (286)
T ss_pred             CCCCEEECccchhhhhccchhh-hccccCCcccCCHhHhcCCCCCCccccHHHHHHH-HHHHhCCCCCCCCC
Confidence            9999999999987654332211 1223456789999999888899999999999999 99999999987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.93  E-value=4.6e-27  Score=163.49  Aligned_cols=140  Identities=24%  Similarity=0.315  Sum_probs=118.0

Q ss_pred             CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCC----Cce
Q 031436           10 TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQ----SVA   85 (159)
Q Consensus        10 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~----~~~   85 (159)
                      +...++++||.++ +|.+.++-.+....+.++...++++++|++.|+.|||   ++=++||||||.||++..+    +++
T Consensus       100 d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~V  175 (438)
T KOG0666|consen  100 DKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRV  175 (438)
T ss_pred             CceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCcceEEEeccCCccCee
Confidence            6788999999987 9999888766555577888999999999999999999   7889999999999999765    899


Q ss_pred             EEEecCCCcccCCCccee--eeeecccccccCccccccCC-CCCCcceEeccccccCcceecccccccCCCc
Q 031436           86 KLFDFSYSESIPEGETRI--RGRVMGTFGYLPPEYIATGD-CNEKCDVYSFDGSRDSGHLTGRAWYRSEDWK  154 (159)
Q Consensus        86 ~l~d~~~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~-~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~  154 (159)
                      |++|+|+++.+.+.....  .....-|+.|+|||.+.+.. |+++.|+|++||+. .||++-++.|.+.+-+
T Consensus       176 KIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIf-aElLtl~PlF~g~E~k  246 (438)
T KOG0666|consen  176 KIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIF-AELLTLEPLFKGREEK  246 (438)
T ss_pred             EeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHH-HHHHccCccccchhhh
Confidence            999999998765543221  12345578899999999875 89999999999998 9999999999886543

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.93  E-value=8.2e-26  Score=160.46  Aligned_cols=141  Identities=26%  Similarity=0.382  Sum_probs=113.0

Q ss_pred             CeEEEEEec--CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLE--TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      |++.+++..  +...++++||+++++|.+.+...+    ..+++..+..++.|++.|+.|||   +++++|+|++|.||+
T Consensus        68 v~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nil  140 (284)
T cd05081          68 VKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHR----ERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNIL  140 (284)
T ss_pred             eEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcC----cCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEE
Confidence            456776643  346789999999999999886532    34788888899999999999999   899999999999999


Q ss_pred             ecCCCceEEEecCCCcccCCCccee--eeeecccccccCccccccCCCCCCcceEeccccccCcceecccccc
Q 031436           79 FQEQSVAKLFDFSYSESIPEGETRI--RGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYR  149 (159)
Q Consensus        79 ~~~~~~~~l~d~~~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~  149 (159)
                      ++.+..++++|||++..........  ......+..|+|||.+.+..++.++|+||||+++ ++++++..++.
T Consensus       141 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~el~~~~~~~~  212 (284)
T cd05081         141 VESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVL-YELFTYSDKSC  212 (284)
T ss_pred             ECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHH-HHHhhcCCcCC
Confidence            9999999999999887654332211  1111234468999999888899999999999999 99999876654

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.93  E-value=1.1e-25  Score=159.47  Aligned_cols=141  Identities=24%  Similarity=0.375  Sum_probs=119.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+..+...++++||+.+++|.+.+..      ..++...+..++.|++.++.+||   +.+++|+|++|.||+++
T Consensus        65 v~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~------~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~  135 (277)
T cd06641          65 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEP------GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLS  135 (277)
T ss_pred             eEEEEEEEeCCeEEEEEEeCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEEC
Confidence            4678889988999999999999999988753      34678888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.++++|||++........ ......++..|++||.+.+..++.++|+||||+++ +++++|..||...+
T Consensus       136 ~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l-~~l~~g~~p~~~~~  205 (277)
T cd06641         136 EHGEVKLADFGVAGQLTDTQI-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITA-IELAKGEPPHSELH  205 (277)
T ss_pred             CCCCEEEeecccceecccchh-hhccccCCccccChhhhccCCCCchhhHHHHHHHH-HHHHcCCCCCCccc
Confidence            999999999998765543221 11223467789999999888889999999999999 99999999997543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.93  E-value=4.8e-26  Score=161.94  Aligned_cols=145  Identities=23%  Similarity=0.295  Sum_probs=114.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++..++..++++||+. +++.+............+++..+..++.|++.|++|+|+  ..+++|+||+|.||+++
T Consensus        66 v~~~~~~~~~~~~~~~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~  142 (288)
T cd06616          66 VKFYGALFREGDCWICMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLD  142 (288)
T ss_pred             eeeeeEEecCCcEEEEEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEc
Confidence            468888888889999999995 576654321100011467888899999999999999993  35899999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC---CCCCCcceEeccccccCcceecccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG---DCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~---~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .+..++++|||++.........  ....++..|+|||.+.+.   .++.++|+||+|+++ +++++|+.||...
T Consensus       143 ~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il-~el~~g~~p~~~~  213 (288)
T cd06616         143 RNGNIKLCDFGISGQLVDSIAK--TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITL-YEVATGKFPYPKW  213 (288)
T ss_pred             cCCcEEEeecchhHHhccCCcc--ccccCccCccCHHHhccccccCCcchhhhhHHHHHH-HHHHhCCCCchhc
Confidence            9999999999988655433221  122467789999998766   689999999999999 9999999999754

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.93  E-value=1.8e-26  Score=163.89  Aligned_cols=141  Identities=26%  Similarity=0.399  Sum_probs=115.5

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++++++..++..++++||+++++|.......     ..+++..+..++.|++.++.|||   +.+++|+|++|.||+++.
T Consensus        64 ~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~  135 (286)
T cd07846          64 NLIEVFRRKKRLYLVFEFVDHTVLDDLEKYP-----NGLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQ  135 (286)
T ss_pred             hHHHhcccCCeEEEEEecCCccHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECC
Confidence            4567788888899999999988887765432     34788899999999999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCC
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +..++++|||++......... .....++..|+|||.+.+. .++.++|+||||+++ +++++|++||.+.+
T Consensus       136 ~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l-~el~~g~~~~~~~~  205 (286)
T cd07846         136 SGVVKLCDFGFARTLAAPGEV-YTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLV-TEMLTGEPLFPGDS  205 (286)
T ss_pred             CCcEEEEeeeeeeeccCCccc-cCcccceeeccCcHHhccccccCchHhHHHHHHHH-HHHHcCCCCCCCCc
Confidence            999999999987765433221 1223467789999998653 478899999999999 99999999997543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.93  E-value=1.4e-25  Score=161.14  Aligned_cols=138  Identities=27%  Similarity=0.400  Sum_probs=115.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++.++|.+++..++++||+. |++.+.+....    ..+++..+..++.|++.++.|||   +.+++|+|++|.||+++
T Consensus        78 v~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~~~----~~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~  149 (307)
T cd06607          78 IEYKGCYLREHTAWLVMEYCL-GSASDILEVHK----KPLQEVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLT  149 (307)
T ss_pred             EEEEEEEEeCCeEEEEHHhhC-CCHHHHHHHcc----cCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEC
Confidence            467889999899999999996 68877765432    35788888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccc---cCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA---TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~---~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||++.......     ...++..|+|||.+.   ...++.++|+||||+++ |++++|+.||...+
T Consensus       150 ~~~~~kL~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il-~el~tg~~p~~~~~  218 (307)
T cd06607         150 EPGTVKLADFGSASLVSPAN-----SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC-IELAERKPPLFNMN  218 (307)
T ss_pred             CCCCEEEeecCcceecCCCC-----CccCCccccCceeeeccCCCCCCcccchHHHHHHH-HHHHcCCCCCCCcc
Confidence            99999999999876543221     234677899999874   35588999999999999 99999999987654

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.93  E-value=1.9e-25  Score=158.48  Aligned_cols=142  Identities=24%  Similarity=0.351  Sum_probs=118.2

Q ss_pred             CeEEEEEecCCC-----ceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC
Q 031436            1 MRLIGCCLETEN-----PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS   75 (159)
Q Consensus         1 v~l~~~~~~~~~-----~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~   75 (159)
                      +++++++.....     .++++||+. ++|.+.+.....   ..+++..+..++.|++.|+.+||   +.+++|+|++|.
T Consensus        64 ~~~~~~~~~~~~~~~~~~~l~~e~~~-~~l~~~l~~~~~---~~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~  136 (287)
T cd07838          64 VRLLDVCHGPRTDRELKLTLVFEHVD-QDLATYLSKCPK---PGLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQ  136 (287)
T ss_pred             ceEEEEEeeccCCCCceeEEEehhcc-cCHHHHHHHccC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChh
Confidence            467888877666     899999996 589888765422   35788999999999999999999   899999999999


Q ss_pred             CEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           76 NILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        76 nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      |++++.+..++++|||.+.........  ....++..|+|||.+.+..++.++|+||||+++ ++|++|++||.+..
T Consensus       137 nili~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l-~~l~~~~~~~~~~~  210 (287)
T cd07838         137 NILVTSDGQVKIADFGLARIYSFEMAL--TSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIF-AELFRRRPLFRGTS  210 (287)
T ss_pred             hEEEccCCCEEEeccCcceeccCCccc--ccccccccccChHHhccCCCCCcchhhhHHHHH-HHHHhCCCcccCCC
Confidence            999999999999999987665433221  112356779999999988899999999999999 99999999998654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.93  E-value=1.6e-25  Score=181.56  Aligned_cols=135  Identities=27%  Similarity=0.419  Sum_probs=112.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++|+|.+++..++||||+++|+|.+.++        .+++.....++.|++.|++|+|..++.+++|||+||.||+++
T Consensus       746 v~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~--------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~  817 (968)
T PLN00113        746 VKLIGLCRSEKGAYLIHEYIEGKNLSEVLR--------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIID  817 (968)
T ss_pred             ceEEEEEEcCCCCEEEEeCCCCCcHHHHHh--------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEEC
Confidence            689999999999999999999999999984        367788889999999999999955456899999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceeccccccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      .+...++. ++........     ....++..|+|||.+.+..++.++||||||+++ ||+++|+.||..
T Consensus       818 ~~~~~~~~-~~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl-~el~tg~~p~~~  880 (968)
T PLN00113        818 GKDEPHLR-LSLPGLLCTD-----TKCFISSAYVAPETRETKDITEKSDIYGFGLIL-IELLTGKSPADA  880 (968)
T ss_pred             CCCceEEE-eccccccccC-----CCccccccccCcccccCCCCCcccchhhHHHHH-HHHHhCCCCCCc
Confidence            87766654 4433222111     112467889999999998999999999999999 999999999854

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.92  E-value=7.5e-26  Score=163.93  Aligned_cols=145  Identities=21%  Similarity=0.247  Sum_probs=115.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++++|..++..++++||+.++++.+.+.....   ..+++..+..++.|++.||.|||   +++++|||+||+||+++
T Consensus        62 v~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~  135 (328)
T cd08226          62 MTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFP---EGMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILIS  135 (328)
T ss_pred             ceEeeeEecCCceEEEEecccCCCHHHHHHhhcc---cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEe
Confidence            5788999999999999999999999998865422   35778888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCccee------eeeecccccccCccccccC--CCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRI------RGRVMGTFGYLPPEYIATG--DCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~------~~~~~~~~~~~ape~~~~~--~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+++.||+............      .....++..|++||.+.+.  .++.++|+||+|+++ +++++|+.||....
T Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l-~el~~g~~p~~~~~  214 (328)
T cd08226         136 GDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITA-CELATGRVPFQDML  214 (328)
T ss_pred             CCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHH-HHHHhCCCCCCCcC
Confidence            99999999986432221111000      0111234569999998763  478999999999999 99999999997654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.92  E-value=9.6e-26  Score=164.36  Aligned_cols=148  Identities=22%  Similarity=0.380  Sum_probs=115.2

Q ss_pred             CeEEEEEec-CCCceEEEEecCCCChHHHhhCCCCC--------------------------------------------
Q 031436            1 MRLIGCCLE-TENPVLVFEYVEYGTLADRIYHPRQP--------------------------------------------   35 (159)
Q Consensus         1 v~l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~--------------------------------------------   35 (159)
                      |+++++|.. ++..+++|||+++|+|.+.+...+..                                            
T Consensus        74 v~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (343)
T cd05103          74 VNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFV  153 (343)
T ss_pred             hhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhcccccccccccccccc
Confidence            356676654 45678999999999999987643210                                            


Q ss_pred             ------------------CCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecCCCcccC
Q 031436           36 ------------------NFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIP   97 (159)
Q Consensus        36 ------------------~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~~~~   97 (159)
                                        ....++......++.|++.|+.|+|   +++++|+||||.||+++.+..++++|||++....
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~  230 (343)
T cd05103         154 EEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIY  230 (343)
T ss_pred             CCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccc
Confidence                              0123567777889999999999999   8999999999999999999999999999887653


Q ss_pred             CCcce-eeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           98 EGETR-IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        98 ~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      ..... ......++..|+|||.+.+..++.++|+||||+++ +++++ |..||....
T Consensus       231 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~el~~~g~~p~~~~~  286 (343)
T cd05103         231 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL-WEIFSLGASPYPGVK  286 (343)
T ss_pred             cCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHH-HHHHHCCCCCCCCcc
Confidence            32211 11122345679999999888899999999999999 99886 999997653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.92  E-value=5.4e-26  Score=162.39  Aligned_cols=142  Identities=23%  Similarity=0.270  Sum_probs=117.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+.+.+++|+||+ +++|.+.+....    ..+++..+..++.|++.|+.+||   +.+++|+||+|.||+++
T Consensus        65 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~----~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~  136 (298)
T cd07841          65 IGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKS----IVLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIA  136 (298)
T ss_pred             hhhhheeecCCEEEEEEccc-CCCHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEc
Confidence            45678888888899999999 889999886532    25788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.++++|||++......... .....++..|+|||.+.+ ..++.++|+||||+++ +++++|.+||.+.+
T Consensus       137 ~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il-~e~~~g~~~~~~~~  207 (298)
T cd07841         137 SDGVLKLADFGLARSFGSPNRK-MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIF-AELLLRVPFLPGDS  207 (298)
T ss_pred             CCCCEEEccceeeeeccCCCcc-ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHH-HHHHcCCccccCCc
Confidence            9999999999988765433221 112234667999998854 4578999999999999 99999988887654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.92  E-value=2.8e-26  Score=162.80  Aligned_cols=137  Identities=20%  Similarity=0.274  Sum_probs=111.7

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++++++.+.+..++++||+. ++|.+.+....    ..+++..+..++.|++.|+.|||   +.+++|+|++|.||+++.
T Consensus        63 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~  134 (284)
T cd07839          63 RLYDVLHSDKKLTLVFEYCD-QDLKKYFDSCN----GDIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINK  134 (284)
T ss_pred             eHHHHhccCCceEEEEecCC-CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcC
Confidence            45667777888999999996 58888775432    45788999999999999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCC-CCCCcceEeccccccCcceeccccc
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD-CNEKCDVYSFDGSRDSGHLTGRAWY  148 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~DvwS~g~~~~~~~~~g~~p~  148 (159)
                      +..++++|||.+......... .....++..|+|||.+.+.. ++.++|+||+|+++ ++|++|..|+
T Consensus       135 ~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il-~~l~tg~~p~  200 (284)
T cd07839         135 NGELKLADFGLARAFGIPVRC-YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIF-AELANAGRPL  200 (284)
T ss_pred             CCcEEECccchhhccCCCCCC-cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHH-HHHHhcCCCC
Confidence            999999999987654332211 12234577899999987654 68999999999999 9999988774

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.92  E-value=5e-26  Score=169.64  Aligned_cols=138  Identities=25%  Similarity=0.382  Sum_probs=117.8

Q ss_pred             CeEEEEEecCCC--ceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLETEN--PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~~~--~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      ||++.++.+..+  .-+|.|.++.|+|..+.++.+     .+....++.|++||+.||.|||+. .-.++|||||=+||+
T Consensus       104 irfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~-----~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIF  177 (632)
T KOG0584|consen  104 IRFYDSWVDTDNKTINFITELFTSGTLREYRKKHR-----RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIF  177 (632)
T ss_pred             eeeeeheecCCCceeeeeeecccCCcHHHHHHHhc-----cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEE
Confidence            678888887665  558899999999999998774     467778999999999999999965 457999999999999


Q ss_pred             ecCC-CceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccc
Q 031436           79 FQEQ-SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYR  149 (159)
Q Consensus        79 ~~~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~  149 (159)
                      +..+ +.+||+|+|++........+   ...||+.+||||+.. ..|+..+||||||+++ +||+|+..||.
T Consensus       178 inG~~G~VKIGDLGLAtl~r~s~ak---svIGTPEFMAPEmYE-E~YnE~VDVYaFGMCm-LEMvT~eYPYs  244 (632)
T KOG0584|consen  178 VNGNLGEVKIGDLGLATLLRKSHAK---SVIGTPEFMAPEMYE-ENYNELVDVYAFGMCM-LEMVTSEYPYS  244 (632)
T ss_pred             EcCCcCceeecchhHHHHhhccccc---eeccCccccChHHHh-hhcchhhhhhhhhHHH-HHHHhccCChh
Confidence            9754 79999999998765443332   257999999999885 6699999999999999 99999999995

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.92  E-value=2.7e-25  Score=160.35  Aligned_cols=138  Identities=27%  Similarity=0.398  Sum_probs=115.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++++||+. |++.+.+....    .++++..+..++.|++.++.+||   +++++|+||+|.||+++
T Consensus        88 v~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~~~----~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~  159 (317)
T cd06635          88 IEYKGCYLREHTAWLVMEYCL-GSASDLLEVHK----KPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLT  159 (317)
T ss_pred             EEEEEEEeeCCeEEEEEeCCC-CCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEEC
Confidence            467889998899999999996 58877765432    45788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccc---cCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA---TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~---~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.++++|||++......     ....++..|+|||.+.   ...++.++|+||||+++ +++++|..||...+
T Consensus       160 ~~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil-~el~~g~~p~~~~~  228 (317)
T cd06635         160 EPGQVKLADFGSASIASPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC-IELAERKPPLFNMN  228 (317)
T ss_pred             CCCCEEEecCCCccccCCc-----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHH-HHHHhCCCCCCCcc
Confidence            9999999999986544321     1234677899999874   35688999999999999 99999999986643

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.92  E-value=1.7e-25  Score=159.55  Aligned_cols=141  Identities=21%  Similarity=0.316  Sum_probs=116.1

Q ss_pred             eEEEEEecC--CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe
Q 031436            2 RLIGCCLET--ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF   79 (159)
Q Consensus         2 ~l~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~   79 (159)
                      ++++++..+  +..++++||+. ++|.+.+....    ..+++.....++.|++.|+.|||   +.+++|+||+|+||++
T Consensus        68 ~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili  139 (293)
T cd07843          68 TVKEVVVGSNLDKIYMVMEYVE-HDLKSLMETMK----QPFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLL  139 (293)
T ss_pred             EEEEEEEecCCCcEEEEehhcC-cCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEE
Confidence            567777766  78999999996 59988886532    35788999999999999999999   8999999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCC-CCCCcceEeccccccCcceecccccccCC
Q 031436           80 QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD-CNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +.++.++++|||.+.......... ....++..|+|||.+.+.. ++.++|+||+|+++ +++++|..||...+
T Consensus       140 ~~~~~~~l~d~g~~~~~~~~~~~~-~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l-~~l~~g~~~f~~~~  211 (293)
T cd07843         140 NNRGILKICDFGLAREYGSPLKPY-TQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIF-AELLTKKPLFPGKS  211 (293)
T ss_pred             CCCCcEEEeecCceeeccCCcccc-ccccccccccCchhhcCCccccchhhHHHHHHHH-HHHHhCCCCCCCCC
Confidence            999999999999887665432211 1234577899999987654 68999999999999 99999999997643

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.92  E-value=1.9e-25  Score=163.38  Aligned_cols=138  Identities=22%  Similarity=0.321  Sum_probs=113.2

Q ss_pred             CeEEEEEecC------CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCLET------ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~~------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      +++++++...      ...++++||+. ++|.+.+..       .++...+..++.|++.|+.+||   +.+++|+||+|
T Consensus        78 v~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-------~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp  146 (353)
T cd07850          78 IGLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQM-------DLDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP  146 (353)
T ss_pred             cceeeeeccCCCccccCcEEEEEeccC-CCHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCH
Confidence            3566666533      35689999995 588887743       2677788889999999999999   89999999999


Q ss_pred             CCEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           75 SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        75 ~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .||+++.++.++++|||.+........  .....++..|+|||.+.+..++.++|+||+|+++ ++|++|+.||.+.+
T Consensus       147 ~Nil~~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l-~~l~~g~~pf~~~~  221 (353)
T cd07850         147 SNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM-GEMIRGTVLFPGTD  221 (353)
T ss_pred             HHEEECCCCCEEEccCccceeCCCCCC--CCCCcccccccCHHHHhCCCCCCchhhHhHHHHH-HHHHHCCCCCCCCC
Confidence            999999999999999998876533221  1223467789999999999999999999999999 99999999997654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.92  E-value=5.9e-26  Score=158.78  Aligned_cols=145  Identities=25%  Similarity=0.351  Sum_probs=120.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+.+++..++++||+++++|.+.+.....   ..+++.....++.|++.++.++|   +.+++|+|++|.||+++
T Consensus        62 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~  135 (257)
T cd08225          62 VTFFASFQENGRLFIVMEYCDGGDLMKRINRQRG---VLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLS  135 (257)
T ss_pred             hhhhheeccCCeEEEEEecCCCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEc
Confidence            3567788888899999999999999998865432   35688889999999999999999   89999999999999998


Q ss_pred             CCC-ceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQS-VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~-~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+. .++++|||.+......... .....++..|+|||...+..++.++|+||||+++ +++++|..||...+.
T Consensus       136 ~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il-~~l~~g~~p~~~~~~  207 (257)
T cd08225         136 KNGMVAKLGDFGIARQLNDSMEL-AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVL-YELCTLKHPFEGNNL  207 (257)
T ss_pred             CCCCeEEecccccchhccCCccc-ccccCCCccccCHHHHcCCCCCchhhHHHHHHHH-HHHHhCCCCCCCccH
Confidence            774 5699999987765433221 1223467789999999888899999999999999 999999999976543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.92  E-value=3e-26  Score=175.90  Aligned_cols=135  Identities=24%  Similarity=0.259  Sum_probs=108.7

Q ss_pred             CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecC
Q 031436           12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFS   91 (159)
Q Consensus        12 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~   91 (159)
                      +.+|.||||.+|+|.|++.....   ..+++.+++.++.|+++|+.+||.. .-.+||||||.+|+|++.++..||+|||
T Consensus       116 EvllLmEyC~gg~Lvd~mn~Rlq---~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFG  191 (738)
T KOG1989|consen  116 EVLLLMEYCKGGSLVDFMNTRLQ---TRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFG  191 (738)
T ss_pred             EEEeehhhccCCcHHHHHHHHHh---ccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccc
Confidence            45688999999999999974322   4599999999999999999999944 4459999999999999999999999999


Q ss_pred             CCcccCCCccee--------eeeecccccccCccccc---cCCCCCCcceEeccccccCcceecccccccC
Q 031436           92 YSESIPEGETRI--------RGRVMGTFGYLPPEYIA---TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        92 ~~~~~~~~~~~~--------~~~~~~~~~~~ape~~~---~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .+..........        .....-|+-|+|||++.   +.+.+.|+|||++||++ |-|.....||+..
T Consensus       192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclL-YkLCy~t~PFe~s  261 (738)
T KOG1989|consen  192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLL-YKLCYFTTPFEES  261 (738)
T ss_pred             ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHH-HHHHHhCCCcCcC
Confidence            865443322100        01111256799999984   66789999999999999 9999999999875

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.92  E-value=1.2e-25  Score=159.62  Aligned_cols=143  Identities=20%  Similarity=0.328  Sum_probs=116.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..++++||+. ++|.+.+.....   ..+++..+..++.|++.|+.|||   +.+++|+|++|.||+++
T Consensus        62 ~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~  134 (284)
T cd07860          62 VKLLDVIHTENKLYLVFEFLH-QDLKKFMDASPL---SGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLIN  134 (284)
T ss_pred             cchhhhcccCCcEEEEeeccc-cCHHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEC
Confidence            456778888889999999995 688887765332   45788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCC-CCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD-CNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||.+......... .....++..|+|||...+.. ++.++|+||||+++ |++++|+.||.+.+
T Consensus       135 ~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il-~~l~tg~~p~~~~~  205 (284)
T cd07860         135 TEGAIKLADFGLARAFGVPVRT-YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIF-AEMVTRRALFPGDS  205 (284)
T ss_pred             CCCCEEEeeccchhhcccCccc-cccccccccccCCeEEecCCCCCcHHHHHHHHHHH-HHHHHCCCCCCCCC
Confidence            9999999999987655332211 11223567799999887654 58899999999999 99999999997653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.92  E-value=3.6e-25  Score=157.92  Aligned_cols=143  Identities=22%  Similarity=0.320  Sum_probs=113.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++..++..++|+||+. ++|.+.+.....   ...+...+..++.|++.|+.+||   +++++|+||+|.||+++
T Consensus        64 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~  136 (294)
T PLN00009         64 VRLQDVVHSEKRLYLVFEYLD-LDLKKHMDSSPD---FAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLID  136 (294)
T ss_pred             eeEEEEEecCCeEEEEEeccc-ccHHHHHHhCCC---CCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEE
Confidence            467889999999999999995 588887754321   33567777889999999999999   89999999999999998


Q ss_pred             C-CCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCC
Q 031436           81 E-QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~-~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      . +..+|++|||.+.......... ....++..|+|||.+.+. .++.++|+||+|+++ |++++|..||.+.+
T Consensus       137 ~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~-~~l~tg~~pf~~~~  208 (294)
T PLN00009        137 RRTNALKLADFGLARAFGIPVRTF-THEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIF-AEMVNQKPLFPGDS  208 (294)
T ss_pred             CCCCEEEEcccccccccCCCcccc-ccCceeecccCHHHHhCCCCCCcHHHHHHHHHHH-HHHHhCCCCCCCCC
Confidence            5 4578999999886543321111 122356789999988664 578999999999999 99999999997643

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.92  E-value=2.2e-25  Score=158.66  Aligned_cols=143  Identities=29%  Similarity=0.397  Sum_probs=117.0

Q ss_pred             CeEEEEEec--CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLE--TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      ++++++|..  .+.++++|||+++++|.+.+..... ....++...+..++.|++.++.|+|   +.+++|+|++|.||+
T Consensus        62 v~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil  137 (287)
T cd06621          62 VKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKK-RGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNIL  137 (287)
T ss_pred             eeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEE
Confidence            456777754  3468999999999999887654221 1245778888899999999999999   899999999999999


Q ss_pred             ecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           79 FQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        79 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      ++.+..++++|||++........   ....++..|++||.+.+..++.++|+||+|+++ |+|++|..||...
T Consensus       138 ~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il-~~l~~g~~p~~~~  206 (287)
T cd06621         138 LTRKGQVKLCDFGVSGELVNSLA---GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTL-LEVAQNRFPFPPE  206 (287)
T ss_pred             EecCCeEEEeecccccccccccc---ccccCCccccCHHHhcCCCCCchhhHHHHHHHH-HHHHhCCCCCCcc
Confidence            99999999999998765433221   123456789999999888999999999999999 9999999999876

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.92  E-value=6e-25  Score=158.31  Aligned_cols=138  Identities=27%  Similarity=0.402  Sum_probs=115.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.++...++++||+. |++.+.+....    .++++..+..++.|++.++.|||   +++++|+|++|.||+++
T Consensus        84 v~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~----~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~  155 (313)
T cd06633          84 IEYKGCYLKEHTAWLVMEYCL-GSASDLLEVHK----KPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLT  155 (313)
T ss_pred             ccEEEEEEeCCEEEEEEecCC-CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEEC
Confidence            467889999899999999995 68888775432    45788888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccc---cCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA---TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~---~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||++......     ....++..|+|||.+.   ...++.++|+||||+++ +++++|..||...+
T Consensus       156 ~~~~~kL~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil-~el~~g~~p~~~~~  224 (313)
T cd06633         156 EPGQVKLADFGSASKSSPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC-IELAERKPPLFNMN  224 (313)
T ss_pred             CCCCEEEeecCCCcccCCC-----CCccccccccChhhccccCCCCCCchhhHHHHHHHH-HHHHhCCCCCCCCC
Confidence            9999999999987543221     1235677899999974   35688899999999999 99999999987654

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.92  E-value=4e-25  Score=158.50  Aligned_cols=143  Identities=23%  Similarity=0.321  Sum_probs=113.3

Q ss_pred             CeEEEEEecCC--------CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecC
Q 031436            1 MRLIGCCLETE--------NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNV   72 (159)
Q Consensus         1 v~l~~~~~~~~--------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l   72 (159)
                      ++++++|...+        ..++++||+. +++.+.+....    ..+++..+..++.|++.|+.|||   +.+++|+|+
T Consensus        74 v~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl  145 (310)
T cd07865          74 VNLIEICRTKATPYNRYKGSFYLVFEFCE-HDLAGLLSNKN----VKFTLSEIKKVMKMLLNGLYYIH---RNKILHRDM  145 (310)
T ss_pred             cceEEEEecccccccCCCceEEEEEcCCC-cCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCC
Confidence            45677776543        3489999996 58888775432    35788999999999999999999   899999999


Q ss_pred             CCCCEEecCCCceEEEecCCCcccCCCcce---eeeeecccccccCccccccCC-CCCCcceEeccccccCcceeccccc
Q 031436           73 KPSNILFQEQSVAKLFDFSYSESIPEGETR---IRGRVMGTFGYLPPEYIATGD-CNEKCDVYSFDGSRDSGHLTGRAWY  148 (159)
Q Consensus        73 ~~~nil~~~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~-~~~~~DvwS~g~~~~~~~~~g~~p~  148 (159)
                      +|+||+++.+..++++|||.+.........   ......++..|+|||.+.+.. ++.++|+||||+++ |++++|+.||
T Consensus       146 ~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l-~el~t~~~~~  224 (310)
T cd07865         146 KAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIM-AEMWTRSPIM  224 (310)
T ss_pred             CHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHH-HHHHhCCCCC
Confidence            999999999999999999988655432211   111234567799999887654 68899999999999 9999999999


Q ss_pred             ccCC
Q 031436          149 RSED  152 (159)
Q Consensus       149 ~~~~  152 (159)
                      .+.+
T Consensus       225 ~~~~  228 (310)
T cd07865         225 QGNT  228 (310)
T ss_pred             CCCC
Confidence            7654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.92  E-value=3.2e-25  Score=159.34  Aligned_cols=143  Identities=20%  Similarity=0.296  Sum_probs=115.1

Q ss_pred             CeEEEEEecC--CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLET--ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      +++++++.+.  +..++++||+. ++|.+.+....    ..+++..+..++.|++.++.+||   +.+++|+||+|.||+
T Consensus        69 ~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~----~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil  140 (309)
T cd07845          69 VELKEVVVGKHLDSIFLVMEYCE-QDLASLLDNMP----TPFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLL  140 (309)
T ss_pred             cceEEEEecCCCCeEEEEEecCC-CCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEE
Confidence            3567777654  45799999996 58888876532    45788899999999999999999   899999999999999


Q ss_pred             ecCCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCCC
Q 031436           79 FQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        79 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      ++.++.++++|||.+.......... .....+..|+|||.+.+ ..++.++|+||+|+++ |++++|+.||...+.
T Consensus       141 ~~~~~~~kL~dfg~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il-~el~~g~~~f~~~~~  214 (309)
T cd07845         141 LTDKGCLKIADFGLARTYGLPAKPM-TPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCIL-AELLAHKPLLPGKSE  214 (309)
T ss_pred             ECCCCCEEECccceeeecCCccCCC-CcccccccccChhhhcCCCCcCchHHHHHHHHHH-HHHHhCCCCCCCCCH
Confidence            9999999999999887654332111 11234667999999875 4578999999999999 999999999976543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.92  E-value=2.2e-25  Score=158.13  Aligned_cols=143  Identities=21%  Similarity=0.333  Sum_probs=116.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..++++||+. ++|.+.+.....   ..+++..+..++.|++.++.+||   +.+++|+|++|.||+++
T Consensus        61 v~~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~~---~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~  133 (283)
T cd07835          61 VRLLDVVHSENKLYLVFEFLD-LDLKKYMDSSPL---TGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLID  133 (283)
T ss_pred             cCHhheeccCCeEEEEEeccC-cCHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEc
Confidence            456778888899999999995 699888865432   35788999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||.+.......... ....++..|+|||.+.+. .++.++|+||||+++ |++++|+.||...+
T Consensus       134 ~~~~~~l~df~~~~~~~~~~~~~-~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l-~~l~~g~~pf~~~~  204 (283)
T cd07835         134 REGALKLADFGLARAFGVPVRTY-THEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIF-AEMVNRRPLFPGDS  204 (283)
T ss_pred             CCCcEEEeecccccccCCCcccc-CccccccCCCCCceeecCcccCcHHHHHHHHHHH-HHHHhCCCCCCCCC
Confidence            99999999999876543322111 112346789999988664 468899999999999 99999999997543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.92  E-value=5.9e-25  Score=153.41  Aligned_cols=145  Identities=26%  Similarity=0.397  Sum_probs=121.9

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++.+.+..++..++++|++++++|.+.+..... ....++......++.+++.++.+||   +.+++|+|++|.|++++.
T Consensus        63 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~  138 (258)
T cd08215          63 KYYESFEEKGKLCIVMEYADGGDLSQKIKKQKK-EGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTS  138 (258)
T ss_pred             heEEEEecCCEEEEEEEecCCCcHHHHHHHhhc-cCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcC
Confidence            467778888899999999999999998876421 1256888999999999999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +..++++|||.+........ ......++..|+|||...+..++.++|+||+|+++ +++++|+.||...+
T Consensus       139 ~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~-~~l~~g~~p~~~~~  207 (258)
T cd08215         139 NGLVKLGDFGISKVLSSTVD-LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVL-YELCTLKHPFEGEN  207 (258)
T ss_pred             CCcEEECCccceeecccCcc-eecceeeeecccChhHhccCCCCccccHHHHHHHH-HHHHcCCCCCCCCc
Confidence            99999999998766544321 22234567789999999888899999999999999 99999999997654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.92  E-value=2.5e-25  Score=157.72  Aligned_cols=141  Identities=23%  Similarity=0.352  Sum_probs=116.3

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++++++.+++..+++|||+ +|+|.+.+.....   ..+++..+..++.|++.++.+||   +++++|+|++|.||+++.
T Consensus        62 ~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~  134 (283)
T cd07830          62 KLKEVFRENDELYFVFEYM-EGNLYQLMKDRKG---KPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSG  134 (283)
T ss_pred             hHHHHhhcCCcEEEEEecC-CCCHHHHHHhccc---ccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcC
Confidence            3456677788899999999 7899988865431   45788999999999999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccc-cCCCCCCcceEeccccccCcceecccccccCC
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA-TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~-~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +..++++|||.+.........  ....++..|+|||.+. ...++.++|+||||+++ +++++|+.||+..+
T Consensus       135 ~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l-~el~~g~~~~~~~~  203 (283)
T cd07830         135 PEVVKIADFGLAREIRSRPPY--TDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIM-AELYTLRPLFPGSS  203 (283)
T ss_pred             CCCEEEeecccceeccCCCCc--CCCCCcccccCceeeecCcCcCCccchhhHHHHH-HHHHhCCCccCCCC
Confidence            999999999987655432221  1234677899999875 44578999999999999 99999999997654

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.92  E-value=8.3e-26  Score=159.72  Aligned_cols=142  Identities=26%  Similarity=0.401  Sum_probs=119.2

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++++++.+++..+++||++++++|.+.+...     ..+++..+..++.|++.++.+||   +.+++|+|++|.||+++.
T Consensus        66 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~  137 (280)
T cd05581          66 KLYYTFQDEENLYFVLEYAPNGELLQYIRKY-----GSLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDK  137 (280)
T ss_pred             hHHHHhcCCceEEEEEcCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECC
Confidence            3455667778899999999999999988654     36888999999999999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcc-------------------eeeeeecccccccCccccccCCCCCCcceEeccccccCcce
Q 031436           82 QSVAKLFDFSYSESIPEGET-------------------RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHL  142 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~-------------------~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~  142 (159)
                      +..++++|||.+........                   .......++..|++||......++.++|+||+|+++ ++++
T Consensus       138 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l-~~l~  216 (280)
T cd05581         138 DMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCII-YQML  216 (280)
T ss_pred             CCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHH-HHHH
Confidence            99999999998765543221                   111233456789999998888899999999999999 9999


Q ss_pred             ecccccccCC
Q 031436          143 TGRAWYRSED  152 (159)
Q Consensus       143 ~g~~p~~~~~  152 (159)
                      +|..||...+
T Consensus       217 ~g~~p~~~~~  226 (280)
T cd05581         217 TGKPPFRGSN  226 (280)
T ss_pred             hCCCCCCCcc
Confidence            9999998654

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.92  E-value=3.1e-25  Score=157.34  Aligned_cols=143  Identities=24%  Similarity=0.349  Sum_probs=116.3

Q ss_pred             CeEEEEEecC--CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLET--ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      +++++++...  +..++++||++ ++|.+.+....    ..+++.....++.|++.|+.+||   +.+++|+|++|.||+
T Consensus        61 ~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil  132 (287)
T cd07840          61 VRLKEIVTSKGKGSIYMVFEYMD-HDLTGLLDSPE----VKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNIL  132 (287)
T ss_pred             eeheeeEecCCCCcEEEEecccc-ccHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeE
Confidence            3567788776  78999999996 58888876532    45788889999999999999999   899999999999999


Q ss_pred             ecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCC
Q 031436           79 FQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        79 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ++.++.++++|||.+...............++..|+|||.+.+. .++.++|+||||+++ +++++|+.||...+
T Consensus       133 ~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l-~el~t~~~p~~~~~  206 (287)
T cd07840         133 INNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCIL-AELFLGKPIFQGST  206 (287)
T ss_pred             EcCCCCEEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHH-HHHHhCCCCCCCCC
Confidence            99999999999998776544321111122346779999987653 578999999999999 99999999997654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.92  E-value=2.3e-25  Score=150.42  Aligned_cols=140  Identities=21%  Similarity=0.300  Sum_probs=112.3

Q ss_pred             CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCC--eEEecCCCCCEEecCCCceEEE
Q 031436           11 ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRP--IVFRNVKPSNILFQEQSVAKLF   88 (159)
Q Consensus        11 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~--~~h~~l~~~nil~~~~~~~~l~   88 (159)
                      ...|+++.|...|+|.+.+...+. .+..+++.+++.++.++++|++++|   +..  ..|||+||.||+++..+.+++.
T Consensus        96 ~~~yll~Pyy~~Gsl~d~i~~~k~-kg~~~sE~~iL~if~gic~gL~~lH---~~~~~yAH~DiKP~NILls~~~~~vl~  171 (302)
T KOG2345|consen   96 HEAYLLLPYYKRGSLLDEIERLKI-KGNFVSEAQILWIFLGICRGLEALH---EKEPPYAHRDIKPANILLSDSGLPVLM  171 (302)
T ss_pred             eeEEEEeehhccccHHHHHHHHhh-cCCccCHHHHHHHHHHHHHHHHHHh---ccCCcccccCCCcceeEecCCCceEEE
Confidence            357899999999999998876543 2256899999999999999999999   776  9999999999999999999999


Q ss_pred             ecCCCcccCCCc----ce---e-eeeecccccccCcccccc---CCCCCCcceEeccccccCcceecccccccCCCcc
Q 031436           89 DFSYSESIPEGE----TR---I-RGRVMGTFGYLPPEYIAT---GDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWKP  155 (159)
Q Consensus        89 d~~~~~~~~~~~----~~---~-~~~~~~~~~~~ape~~~~---~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~~  155 (159)
                      |||.........    ..   . .....++..|+|||.+.-   ...+.++||||+||++ |.++.|..||+....++
T Consensus       172 D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtL-Ya~mf~~sPfe~~~~~G  248 (302)
T KOG2345|consen  172 DLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTL-YAMMFGESPFERIYQQG  248 (302)
T ss_pred             eccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHH-HHHHHcCCcchHHhhcC
Confidence            999865433110    00   0 012235788999998853   4568999999999999 99999999998765544

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.92  E-value=3.2e-25  Score=154.52  Aligned_cols=140  Identities=29%  Similarity=0.387  Sum_probs=118.2

Q ss_pred             EEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCC
Q 031436            3 LIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQ   82 (159)
Q Consensus         3 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~   82 (159)
                      +++.+..++..+++||++++++|.+.+...     ..+++.....++.|++.++.++|   +++++|+|++|.||+++.+
T Consensus        58 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~  129 (250)
T cd05123          58 LHYAFQTEEKLYLVLEYAPGGELFSHLSKE-----GRFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDAD  129 (250)
T ss_pred             HHHHeecCCeeEEEEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCC
Confidence            345677788899999999999999988654     35788888999999999999999   8999999999999999999


Q ss_pred             CceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           83 SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        83 ~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ..++++|||.+......... .....++..|++||...+...+.++|+||||+++ +++++|+.||...+
T Consensus       130 ~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~-~~l~~g~~p~~~~~  197 (250)
T cd05123         130 GHIKLTDFGLAKELSSEGSR-TNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLL-YEMLTGKPPFYAED  197 (250)
T ss_pred             CcEEEeecCcceecccCCCc-ccCCcCCccccChHHhCCCCCCchhhHHHHHHHH-HHHHHCCCCCCCCC
Confidence            99999999987665433211 1223467789999999888889999999999999 99999999997665

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.92  E-value=2.6e-25  Score=158.94  Aligned_cols=139  Identities=25%  Similarity=0.424  Sum_probs=113.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCC-CCeEEecCCCCCEEe
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS-RPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~-~~~~h~~l~~~nil~   79 (159)
                      ++++++|.+++..++++||+. +++.+.+....    ..+++..+..++.|++.++.|||   + .+++|+||+|.||++
T Consensus        77 ~~~~~~~~~~~~~~~v~e~~~-~~l~~l~~~~~----~~l~~~~~~~i~~~i~~~l~~lH---~~~~i~H~dl~p~nill  148 (296)
T cd06618          77 VKCYGYFITDSDVFICMELMS-TCLDKLLKRIQ----GPIPEDILGKMTVAIVKALHYLK---EKHGVIHRDVKPSNILL  148 (296)
T ss_pred             HhhheeeecCCeEEEEeeccC-cCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hhCCEecCCCcHHHEEE
Confidence            356788999999999999995 57777765432    35788888899999999999999   6 589999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCC----CCCCcceEeccccccCcceeccccccc
Q 031436           80 QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD----CNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~----~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      +.+..++++|||.+.........  ....++..|+|||.+.+..    ++.++|+||||+++ |++++|+.||..
T Consensus       149 ~~~~~~kL~dfg~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il-~el~~g~~p~~~  220 (296)
T cd06618         149 DASGNVKLCDFGISGRLVDSKAK--TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISL-VELATGQFPYKN  220 (296)
T ss_pred             cCCCCEEECccccchhccCCCcc--cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHH-HHHHhCCCCCCc
Confidence            99999999999987655332211  1223567899999987553    78899999999999 999999999965

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.91  E-value=5.9e-25  Score=155.94  Aligned_cols=145  Identities=20%  Similarity=0.312  Sum_probs=118.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++.+.+.+..++++||++ ++|.+.+.....  ...+++..+..++.|++.++.++|   +.+++|+|++|.||+++
T Consensus        61 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~  134 (284)
T cd07836          61 VRLHDVIHTENKLMLVFEYMD-KDLKKYMDTHGV--RGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLIN  134 (284)
T ss_pred             eeeeeeEeeCCcEEEEEecCC-ccHHHHHHhcCC--CCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEC
Confidence            467889999999999999997 588887764321  145788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+..++++|||.+......... .....++..|++||.+.+. .++.++|+||+|+++ +++++|+.||.+.+.
T Consensus       135 ~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l-~~l~~g~~~~~~~~~  206 (284)
T cd07836         135 KRGELKLADFGLARAFGIPVNT-FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIM-AEMITGRPLFPGTNN  206 (284)
T ss_pred             CCCcEEEeecchhhhhcCCccc-cccccccccccChHHhcCCCCCCcHHHHHHHHHHH-HHHHhCCCCCCCCCc
Confidence            9999999999987654332211 1122456779999988654 568899999999999 999999999987654

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.91  E-value=5.3e-25  Score=154.31  Aligned_cols=149  Identities=19%  Similarity=0.286  Sum_probs=120.0

Q ss_pred             CeEEEEEec--CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcC--CCCeEEecCCCCC
Q 031436            1 MRLIGCCLE--TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF--SRPIVFRNVKPSN   76 (159)
Q Consensus         1 v~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--~~~~~h~~l~~~n   76 (159)
                      +++++.+..  +...++++||+++++|.+.+..... ....+++..+..++.|++.++.++|...  +.+++|+|++|.|
T Consensus        62 ~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~n  140 (265)
T cd08217          62 VRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKK-ERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPAN  140 (265)
T ss_pred             ceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHH
Confidence            355666643  4457899999999999998865422 1256788899999999999999999332  4679999999999


Q ss_pred             EEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           77 ILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        77 il~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      |+++.+..++++|||.+......... .....++..|++||.+.+..++.++|+||||+++ +++++|+.||...+
T Consensus       141 ili~~~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il-~~l~~g~~p~~~~~  214 (265)
T cd08217         141 IFLDANNNVKLGDFGLAKILGHDSSF-AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLI-YELCALSPPFTARN  214 (265)
T ss_pred             EEEecCCCEEEecccccccccCCccc-ccccccCCCccChhhhcCCCCCchhHHHHHHHHH-HHHHHCCCcccCcC
Confidence            99999999999999988766443321 1223567889999999888899999999999999 99999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=1e-24  Score=152.05  Aligned_cols=142  Identities=27%  Similarity=0.438  Sum_probs=120.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..++++||+++++|.+.+...     ..+++..+..++.|++.++.++|   +.+++|+|++|.||+++
T Consensus        62 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-----~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~  133 (254)
T cd06627          62 VKYIGSIETSDSLYIILEYAENGSLRQIIKKF-----GPFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTT  133 (254)
T ss_pred             cEEEEEEEeCCEEEEEEecCCCCcHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEC
Confidence            35677888888899999999999999988654     45788888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..+++.|||.+......... .....++..|+|||...+..++.++|+||+|+++ +++++|..||...+
T Consensus       134 ~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l-~~l~~g~~p~~~~~  203 (254)
T cd06627         134 KDGVVKLADFGVATKLNDVSKD-DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTV-IELLTGNPPYYDLN  203 (254)
T ss_pred             CCCCEEEeccccceecCCCccc-ccccccchhhcCHhhhcCCCCCcchhHHHHHHHH-HHHHhCCCCCCCcc
Confidence            9999999999988766443321 1223467789999999887889999999999999 99999999997543

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.91  E-value=1.1e-24  Score=156.52  Aligned_cols=137  Identities=27%  Similarity=0.406  Sum_probs=113.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++.+++..+...++++||+. |++.+.+....    ..++...+..++.|++.++.++|   +++++|+||+|.||+++
T Consensus        78 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~----~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~  149 (308)
T cd06634          78 IQYRGCYLREHTAWLVMEYCL-GSASDLLEVHK----KPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLS  149 (308)
T ss_pred             ccEEEEEEcCCeeEEEEEccC-CCHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEEC
Confidence            467888888889999999996 68877765432    45778888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccc---cCCCCCCcceEeccccccCcceecccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA---TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~---~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .++.++++|||++.......     ...++..|+|||.+.   ...++.++|+||||+++ +++++|..||...
T Consensus       150 ~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il-~el~~g~~p~~~~  217 (308)
T cd06634         150 EPGLVKLGDFGSASIMAPAN-----XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC-IELAERKPPLFNM  217 (308)
T ss_pred             CCCcEEECCcccceeecCcc-----cccCCccccCHHHHhhcccCCCCcccchHHHHHHH-HHHHcCCCCCccc
Confidence            99999999999876543221     234677899999874   34578899999999999 9999999998654

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.91  E-value=2.5e-25  Score=157.62  Aligned_cols=141  Identities=23%  Similarity=0.337  Sum_probs=116.5

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++++.+..++..++++||+. +++.+.+....    ..+++..+..++.|++.++.+||   +.+++|+|++|.||+++.
T Consensus        62 ~~~~~~~~~~~~~~v~e~~~-~~l~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~  133 (283)
T cd05118          62 KLLDVFRHKGDLYLVFEFMD-TDLYKLIKDRQ----RGLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINT  133 (283)
T ss_pred             hHHHhhccCCCEEEEEeccC-CCHHHHHHhhc----ccCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECC
Confidence            45667777888999999996 58888776532    46788889999999999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCC
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +..++++|||.+......... .....++..|+|||.+.+. .++.++|+||+|+++ +++++|+.||++.+
T Consensus       134 ~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l-~~l~tg~~~~~~~~  203 (283)
T cd05118         134 EGVLKLADFGLARSFGSPVRP-YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIF-AELLSRRPLFPGKS  203 (283)
T ss_pred             CCcEEEeeeeeeEecCCCccc-ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHH-HHHHhCCCCCCCCC
Confidence            999999999987665443211 1123456779999998776 689999999999999 99999999997655

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.91  E-value=2.6e-25  Score=161.46  Aligned_cols=134  Identities=21%  Similarity=0.350  Sum_probs=110.3

Q ss_pred             CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEe
Q 031436           10 TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFD   89 (159)
Q Consensus        10 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d   89 (159)
                      ....++++||+. ++|.+.+...     ..+++..+..++.|++.|+.|||   +++++|+|++|+||+++.++.++++|
T Consensus        80 ~~~~~lv~e~~~-~~l~~~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~d  150 (334)
T cd07855          80 FKDVYVVMDLME-SDLHHIIHSD-----QPLTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGD  150 (334)
T ss_pred             CceEEEEEehhh-hhHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEecc
Confidence            346789999995 6898887543     45788999999999999999999   89999999999999999999999999


Q ss_pred             cCCCcccCCCccee---eeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCCC
Q 031436           90 FSYSESIPEGETRI---RGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        90 ~~~~~~~~~~~~~~---~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      ||.+..........   .....++..|+|||.+.+ ..++.++|+||||+++ |+|++|+.||.+.+.
T Consensus       151 fg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l-~el~~g~~pf~~~~~  217 (334)
T cd07855         151 FGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIF-AEMLGRRQLFPGKNY  217 (334)
T ss_pred             cccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHH-HHHHcCCCccCCCCh
Confidence            99886654322111   122356778999998765 4588999999999999 999999999987653

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.91  E-value=2.5e-25  Score=155.42  Aligned_cols=144  Identities=20%  Similarity=0.304  Sum_probs=119.2

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++.+++.++...++++||+++++|.+.+..... ....+++..+..++.|++.|+.++|   +.+++|+|++|.||+++.
T Consensus        63 ~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~  138 (256)
T cd08530          63 SYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKK-KRKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVA  138 (256)
T ss_pred             hhhhhhccCCEEEEEehhcCCCCHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEec
Confidence            345666777889999999999999988765321 1145778888899999999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      +..++++|||.+........   ....++..|++||.+.+..++.++|+||+|+++ +++++|+.||...+.
T Consensus       139 ~~~~kl~d~g~~~~~~~~~~---~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~-~~l~~g~~p~~~~~~  206 (256)
T cd08530         139 NDLVKIGDLGISKVLKKNMA---KTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLL-YEMATFAPPFEARSM  206 (256)
T ss_pred             CCcEEEeeccchhhhccCCc---ccccCCccccCHHHHCCCCCCchhhHHHHHHHH-HHHHhCCCCCCCCCH
Confidence            99999999998766544311   123467789999999988899999999999999 999999999977653

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.91  E-value=6.8e-25  Score=156.92  Aligned_cols=132  Identities=23%  Similarity=0.301  Sum_probs=107.1

Q ss_pred             CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecC
Q 031436           12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFS   91 (159)
Q Consensus        12 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~   91 (159)
                      .+++++||+++ ++.+.+....    ..++...+..++.|++.|+.|||   +.+++|+|++|.||+++.+..+|++|||
T Consensus        90 ~~~lv~e~~~~-~l~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~kl~dfg  161 (302)
T cd07864          90 AFYLVFEYMDH-DLMGLLESGL----VHFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKLADFG  161 (302)
T ss_pred             cEEEEEcccCc-cHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCcEEeCccc
Confidence            78999999975 7877775431    45788999999999999999999   8999999999999999999999999999


Q ss_pred             CCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCC
Q 031436           92 YSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+................+..|++||.+.+. .++.++|+||+|+++ +++++|+.||...+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~-~el~~g~~~~~~~~  222 (302)
T cd07864         162 LARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCIL-GELFTKKPIFQANQ  222 (302)
T ss_pred             ccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHH-HHHHhCCCCCCCCC
Confidence            8876543322111112346679999987653 478999999999999 99999999997654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.91  E-value=2e-25  Score=177.77  Aligned_cols=131  Identities=18%  Similarity=0.097  Sum_probs=101.5

Q ss_pred             CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCC-------
Q 031436           11 ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQS-------   83 (159)
Q Consensus        11 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~-------   83 (159)
                      ..++.++|++ +++|.+.+....    ..++..+++.++.|++.|+.|||   +++++||||||+|||++..+       
T Consensus        53 ~~~~~~~e~~-~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH---~~gIvHrDlKP~NiLl~~~~~~k~~d~  124 (793)
T PLN00181         53 DSIVRALECE-DVSLRQWLDNPD----RSVDAFECFHVFRQIVEIVNAAH---SQGIVVHNVRPSCFVMSSFNHVSFIES  124 (793)
T ss_pred             chhhhhhccC-CccHHHHHhccc----ccccHHHHHHHHHHHHHHHHHHH---hCCeeeccCCchhEEEcccCcEEEeec
Confidence            4567889988 569999986432    45888999999999999999999   99999999999999996533       


Q ss_pred             ------------ceEEEecCCCcccCCCc---------------ceeeeeecccccccCccccccCCCCCCcceEecccc
Q 031436           84 ------------VAKLFDFSYSESIPEGE---------------TRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGS  136 (159)
Q Consensus        84 ------------~~~l~d~~~~~~~~~~~---------------~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~  136 (159)
                                  .+|++|||+++......               ........+++.|+|||.+.+..++.++|||||||+
T Consensus       125 ~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGvi  204 (793)
T PLN00181        125 ASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVL  204 (793)
T ss_pred             cccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHH
Confidence                        45566666554321000               000011346778999999999999999999999999


Q ss_pred             ccCcceeccccccc
Q 031436          137 RDSGHLTGRAWYRS  150 (159)
Q Consensus       137 ~~~~~~~g~~p~~~  150 (159)
                      + |||++|.+|+..
T Consensus       205 L-~ELl~~~~~~~~  217 (793)
T PLN00181        205 L-FELFCPVSSREE  217 (793)
T ss_pred             H-HHHhhCCCchhh
Confidence            9 999999888764

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.91  E-value=5.4e-25  Score=160.04  Aligned_cols=130  Identities=21%  Similarity=0.346  Sum_probs=108.8

Q ss_pred             CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecC
Q 031436           12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFS   91 (159)
Q Consensus        12 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~   91 (159)
                      ..++++||+. ++|.+.+...     ..+++..+..++.|++.|+.+||   +++++|+|++|.||+++.+..++++|||
T Consensus        83 ~~~lv~e~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg  153 (337)
T cd07858          83 DVYIVYELMD-TDLHQIIRSS-----QTLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFG  153 (337)
T ss_pred             cEEEEEeCCC-CCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCc
Confidence            4799999995 6898887653     45888999999999999999999   8999999999999999999999999999


Q ss_pred             CCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCC
Q 031436           92 YSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ++........ ......++..|+|||.+.. ..++.++|+||||+++ +++++|+.||.+.+
T Consensus       154 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il-~~l~~g~~pf~~~~  213 (337)
T cd07858         154 LARTTSEKGD-FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIF-AELLGRKPLFPGKD  213 (337)
T ss_pred             cccccCCCcc-cccccccccCccChHHHhcCCCCCCcccHHHHHHHH-HHHHcCCCCCCCCC
Confidence            8876543221 1122346778999998764 4589999999999999 99999999998765

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.91  E-value=3.1e-25  Score=160.66  Aligned_cols=141  Identities=25%  Similarity=0.369  Sum_probs=115.3

Q ss_pred             EEEEEecCC-----CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCE
Q 031436            3 LIGCCLETE-----NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNI   77 (159)
Q Consensus         3 l~~~~~~~~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~ni   77 (159)
                      +.+++....     ..++++||+. ++|.+.+...     ..+++..+..++.|++.++.+||   +.+++|+|++|.||
T Consensus        64 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~-----~~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~ni  134 (330)
T cd07834          64 LLDILRPPSPEDFNDVYIVTELME-TDLHKVIKSP-----QPLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNI  134 (330)
T ss_pred             hhhhhcccCcccccceEEEecchh-hhHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHE
Confidence            345555443     7899999996 5888888653     36788889999999999999999   89999999999999


Q ss_pred             EecCCCceEEEecCCCcccCCCcc--eeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCCC
Q 031436           78 LFQEQSVAKLFDFSYSESIPEGET--RIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        78 l~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      +++.++.++++|||.+........  .......++..|+|||.+.+. .++.++|+||+|+++ +++++|+.||.+.+.
T Consensus       135 li~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il-~~l~~g~~pf~~~~~  212 (330)
T cd07834         135 LVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIF-AELLTRKPLFPGRDY  212 (330)
T ss_pred             EEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHH-HHHHcCCCCcCCCCH
Confidence            999999999999998876544321  111223467789999999887 789999999999999 999999999987653

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.91  E-value=5.3e-26  Score=174.26  Aligned_cols=142  Identities=23%  Similarity=0.363  Sum_probs=121.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +||+|+|..+. +.||.+|++.|+|.++++..+    ..+.....+.|..||+.|+.|||   +++++||||..+|+|+.
T Consensus       761 ~RLLgvc~~s~-~qlvtq~mP~G~LlDyvr~hr----~~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVk  832 (1177)
T KOG1025|consen  761 LRLLGVCMLST-LQLVTQLMPLGCLLDYVREHR----DNIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVK  832 (1177)
T ss_pred             HHHhhhcccch-HHHHHHhcccchHHHHHHHhh----ccccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeec
Confidence            57889998744 889999999999999998765    46778889999999999999999   99999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCccee-eeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRI-RGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~  151 (159)
                      .-..+|+.|||+++.+..+...- .....-++.|+|-|.+....|+.++|||||||++ ||++| |..||.+.
T Consensus       833 sP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVti-WElmTFGa~Py~gi  904 (1177)
T KOG1025|consen  833 SPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTI-WELMTFGAKPYDGI  904 (1177)
T ss_pred             CCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhH-HHHHhcCCCccCCC
Confidence            99999999999988765543321 1223346789999999999999999999999999 66665 99999875

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.91  E-value=2.5e-24  Score=151.93  Aligned_cols=148  Identities=21%  Similarity=0.349  Sum_probs=114.2

Q ss_pred             CeEEEEEecCC------CceEEEEecCCCChHHHhhCCC-CCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCC
Q 031436            1 MRLIGCCLETE------NPVLVFEYVEYGTLADRIYHPR-QPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK   73 (159)
Q Consensus         1 v~l~~~~~~~~------~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~   73 (159)
                      +++++++....      ..++++||+.+|+|.+.+...+ ..+...++......++.|++.|+.|+|   +++++|+|++
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dik  140 (273)
T cd05074          64 IKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLA  140 (273)
T ss_pred             ceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccc
Confidence            45677765432      2368899999999988764322 112234678888999999999999999   8999999999


Q ss_pred             CCCEEecCCCceEEEecCCCcccCCCcce-eeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccC
Q 031436           74 PSNILFQEQSVAKLFDFSYSESIPEGETR-IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSE  151 (159)
Q Consensus        74 ~~nil~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~  151 (159)
                      |.||+++.+..++++|||.+......... ......++..|++||.+....++.++|+||||+++ |++++ |+.||.+.
T Consensus       141 p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il-~el~~~g~~p~~~~  219 (273)
T cd05074         141 ARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTM-WEIMTRGQTPYAGV  219 (273)
T ss_pred             hhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHH-HHHhhCCCCCCCCC
Confidence            99999999999999999987765432211 11122345678999999888899999999999999 99998 89998765


Q ss_pred             C
Q 031436          152 D  152 (159)
Q Consensus       152 ~  152 (159)
                      +
T Consensus       220 ~  220 (273)
T cd05074         220 E  220 (273)
T ss_pred             C
Confidence            4

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.91  E-value=8.7e-25  Score=158.71  Aligned_cols=142  Identities=21%  Similarity=0.289  Sum_probs=116.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++..++..+++|||+. |+|.+.+...     ..++......++.|++.++.+||   +.+++|+||+|.||+++
T Consensus        83 v~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~-----~~~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~~nill~  153 (335)
T PTZ00024         83 MGLVDVYVEGDFINLVMDIMA-SDLKKVVDRK-----IRLTESQVKCILLQILNGLNVLH---KWYFMHRDLSPANIFIN  153 (335)
T ss_pred             eeeeEEEecCCcEEEEEeccc-cCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHeEEC
Confidence            467888888899999999996 6999888643     45788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCc-------------ceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceeccc
Q 031436           81 EQSVAKLFDFSYSESIPEGE-------------TRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRA  146 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~-------------~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~  146 (159)
                      .+..++++|||.+.......             ........++..|+|||.+.+. .++.++|+||+|+++ +++++|+.
T Consensus       154 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l-~el~tg~~  232 (335)
T PTZ00024        154 SKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIF-AELLTGKP  232 (335)
T ss_pred             CCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHH-HHHHhCCC
Confidence            99999999999876554110             0001112346679999998764 468999999999999 99999999


Q ss_pred             ccccCC
Q 031436          147 WYRSED  152 (159)
Q Consensus       147 p~~~~~  152 (159)
                      ||.+.+
T Consensus       233 p~~~~~  238 (335)
T PTZ00024        233 LFPGEN  238 (335)
T ss_pred             CCCCCC
Confidence            998654

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.91  E-value=4.9e-25  Score=160.14  Aligned_cols=131  Identities=21%  Similarity=0.325  Sum_probs=107.1

Q ss_pred             CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEec
Q 031436           11 ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF   90 (159)
Q Consensus        11 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~   90 (159)
                      ...++++||+. +++.+.+..      ..+++..+..++.|++.|+.+||   +.+++|+||+|.||+++.+..++++||
T Consensus        81 ~~~~lv~e~~~-~~l~~~~~~------~~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~df  150 (336)
T cd07849          81 NDVYIVQELME-TDLYKLIKT------QHLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDF  150 (336)
T ss_pred             ceEEEEehhcc-cCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECcc
Confidence            35789999996 588877743      45788889999999999999999   899999999999999999999999999


Q ss_pred             CCCcccCCCcce--eeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCC
Q 031436           91 SYSESIPEGETR--IRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        91 ~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      |++.........  ......++..|+|||.+.+ ..++.++|+||+|+++ ++|++|+.||.+.+
T Consensus       151 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil-~el~~G~~~f~~~~  214 (336)
T cd07849         151 GLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCIL-AEMLSNRPLFPGKD  214 (336)
T ss_pred             cceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHH-HHHHhCCCCCCCCC
Confidence            987654332211  1112346778999998755 4688999999999999 99999999997654

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.91  E-value=1.4e-24  Score=157.76  Aligned_cols=140  Identities=25%  Similarity=0.372  Sum_probs=112.4

Q ss_pred             CeEEEEEec--CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLE--TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      ++++++|..  +..+++++||+. ++|.+.+...      .+.+.....++.|++.++.+||   +.+++|+|++|.||+
T Consensus        70 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nil  139 (337)
T cd07852          70 VKLLNVIKAENDKDIYLVFEYME-TDLHAVIRAN------ILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNIL  139 (337)
T ss_pred             cceeeeeccCCCceEEEEecccc-cCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEE
Confidence            466777754  335799999996 5998877542      4567777889999999999999   899999999999999


Q ss_pred             ecCCCceEEEecCCCcccCCCcce----eeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccC
Q 031436           79 FQEQSVAKLFDFSYSESIPEGETR----IRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        79 ~~~~~~~~l~d~~~~~~~~~~~~~----~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      ++.++.++++|||.+.........    ......++..|+|||.+.+ ..++.++|+||||+++ |++++|+.||.+.
T Consensus       140 l~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l-~el~tg~~pf~~~  216 (337)
T cd07852         140 LNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCIL-GEMLLGKPLFPGT  216 (337)
T ss_pred             EcCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHH-HHHHhCCCCCCCC
Confidence            999999999999988765432211    1123456778999998765 4578999999999999 9999999999754

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.91  E-value=1.8e-24  Score=150.85  Aligned_cols=143  Identities=28%  Similarity=0.386  Sum_probs=120.7

Q ss_pred             CeEEEEEecC--CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLET--ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      +++++.+.+.  +..++++|++++++|.+.+...     ..+++..+..++.|++.++.+||   +.+++|+|++|.||+
T Consensus        62 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~  133 (260)
T cd06606          62 VRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKF-----GKLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANIL  133 (260)
T ss_pred             eeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEE
Confidence            3567777777  7889999999999999988654     36788888999999999999999   899999999999999


Q ss_pred             ecCCCceEEEecCCCcccCCCcce-eeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           79 FQEQSVAKLFDFSYSESIPEGETR-IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        79 ~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ++.+..++++|||.+......... ......++..|++||......++.++|+||||+++ +++++|..||...+
T Consensus       134 i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il-~~l~~g~~p~~~~~  207 (260)
T cd06606         134 VDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTV-IEMATGKPPWSELG  207 (260)
T ss_pred             EcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHH-HHHHhCCCCCCCCC
Confidence            999999999999987766543320 11223467789999999888899999999999999 99999999997765

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.90  E-value=1.1e-24  Score=154.26  Aligned_cols=141  Identities=25%  Similarity=0.387  Sum_probs=116.7

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++++++...+..++++||+. ++|.+.+....    ..+++..+..++.|++.++.+||   +.+++|+|++|.||+++.
T Consensus        62 ~~~~~~~~~~~~~~v~e~~~-~~l~~~i~~~~----~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~  133 (282)
T cd07829          62 KLLDVIHTERKLYLVFEYCD-MDLKKYLDKRP----GPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINR  133 (282)
T ss_pred             HHHhhhhcCCceEEEecCcC-cCHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcC
Confidence            45667777788999999997 59999887542    35788899999999999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCC
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +..++++|||.+......... ......+..|+|||.+.+. .++.++|+||||+++ +++++|+.||.+.+
T Consensus       134 ~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l-~~l~~~~~~~~~~~  203 (282)
T cd07829         134 DGVLKLADFGLARAFGIPLRT-YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIF-AEMITGKPLFPGDS  203 (282)
T ss_pred             CCCEEEecCCcccccCCCccc-cCccccCcCcCChHHhcCCcCCCccccHHHHHHHH-HHHHhCCCCCCCcc
Confidence            999999999987765433211 1122346679999998766 789999999999999 99999999997764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.90  E-value=2e-24  Score=156.69  Aligned_cols=132  Identities=23%  Similarity=0.350  Sum_probs=108.3

Q ss_pred             CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEec
Q 031436           11 ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF   90 (159)
Q Consensus        11 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~   90 (159)
                      ...++++|++. ++|.+.+...     ..+++..+..++.|++.|+.|||   +.+++|+|++|.||+++.++.++++||
T Consensus        79 ~~~~~~~e~~~-~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Df  149 (332)
T cd07857          79 NELYLYEELME-ADLHQIIRSG-----QPLTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDF  149 (332)
T ss_pred             CcEEEEEeccc-CCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcC
Confidence            34678899985 6898888643     45788899999999999999999   899999999999999999999999999


Q ss_pred             CCCcccCCCcce---eeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCC
Q 031436           91 SYSESIPEGETR---IRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        91 ~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      |.+.........   ......++..|+|||.+.+ ..++.++|+||+|+++ +++++|+.||.+.+
T Consensus       150 g~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l-~~l~~g~~pf~~~~  214 (332)
T cd07857         150 GLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCIL-AELLGRKPVFKGKD  214 (332)
T ss_pred             CCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHH-HHHHhCCcCCCCCC
Confidence            988765432211   1122356788999998765 4689999999999999 99999999997654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.90  E-value=6.6e-25  Score=153.93  Aligned_cols=142  Identities=19%  Similarity=0.291  Sum_probs=115.0

Q ss_pred             EEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCC
Q 031436            3 LIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQ   82 (159)
Q Consensus         3 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~   82 (159)
                      +++.+.+.+..++++||+++++|.+.+..... ....+++..+..++.|++.++.++|   +.+++|+|++|.|++++. 
T Consensus        67 ~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-  141 (260)
T cd08222          67 FHASFLERDAFCIITEYCEGRDLDCKLEELKH-TGKTLSENQVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-  141 (260)
T ss_pred             HHHHHhcCCceEEEEEeCCCCCHHHHHHHHhh-cccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-
Confidence            44566677788999999999999988764321 1146888999999999999999999   899999999999999975 


Q ss_pred             CceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           83 SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        83 ~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      ..++++|||.+........ ......++..|+|||...+..++.++|+||||+++ +++++|..||...
T Consensus       142 ~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~-~~l~~~~~~~~~~  208 (260)
T cd08222         142 NLLKIGDFGVSRLLMGSCD-LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCIL-YEMCCLAHAFEGQ  208 (260)
T ss_pred             CCEeecccCceeecCCCcc-cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHH-HHHHhCCCCCCCc
Confidence            4589999998765543222 11223467789999999888889999999999999 9999999998653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.90  E-value=4e-24  Score=155.95  Aligned_cols=136  Identities=24%  Similarity=0.346  Sum_probs=109.8

Q ss_pred             eEEEEEecC------CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC
Q 031436            2 RLIGCCLET------ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS   75 (159)
Q Consensus         2 ~l~~~~~~~------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~   75 (159)
                      ++.+++...      +..+++++++ +++|.+.+..      ..+++..+..++.|++.|+.|+|   +.+++|+|++|.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~  149 (345)
T cd07877          80 GLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPS  149 (345)
T ss_pred             ceeeeeeecccccccccEEEEehhc-ccCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChH
Confidence            455555432      3467888887 7899887753      34778888999999999999999   899999999999


Q ss_pred             CEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCC
Q 031436           76 NILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        76 nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ||+++.++.++++|||++.......    ....++..|+|||.+.+ ..++.++|+||+|+++ +++++|+.||...+
T Consensus       150 NIll~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il-~el~~g~~pf~~~~  222 (345)
T cd07877         150 NLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM-AELLTGRTLFPGTD  222 (345)
T ss_pred             HEEEcCCCCEEEecccccccccccc----cccccCCCccCHHHHhCccCCCchhhHHHHHHHH-HHHHhCCCCCCCCC
Confidence            9999999999999999876543221    12346778999998866 4678999999999999 99999999997643

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.90  E-value=3.6e-24  Score=155.25  Aligned_cols=137  Identities=24%  Similarity=0.333  Sum_probs=112.0

Q ss_pred             CeEEEEEec-CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe
Q 031436            1 MRLIGCCLE-TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~   79 (159)
                      |++.++|.. ++..++++||+ +++|.+.+..      .+++......++.|++.++.+||   +.+++|+|++|.|+++
T Consensus        72 v~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~------~~~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili  141 (328)
T cd07856          72 ISLSDIFISPLEDIYFVTELL-GTDLHRLLTS------RPLEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNILI  141 (328)
T ss_pred             eeEeeeEecCCCcEEEEeehh-ccCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeE
Confidence            456777765 56788999999 5689887753      34667777789999999999999   8999999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCC
Q 031436           80 QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +.+..++++|||.+.......    ....++..|+|||.+.+ ..++.++|+||+|+++ +++++|+.||++.+
T Consensus       142 ~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il-~el~tg~~~f~~~~  210 (328)
T cd07856         142 NENCDLKICDFGLARIQDPQM----TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIF-AEMLEGKPLFPGKD  210 (328)
T ss_pred             CCCCCEEeCccccccccCCCc----CCCcccccccCceeeeccCCcCcHHHHHHHHHHH-HHHHhCCCCCCCCC
Confidence            999999999999876543211    12345677999998765 5689999999999999 99999999997754

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.90  E-value=7.3e-25  Score=152.57  Aligned_cols=128  Identities=24%  Similarity=0.332  Sum_probs=108.5

Q ss_pred             CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecC
Q 031436           12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFS   91 (159)
Q Consensus        12 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~   91 (159)
                      ..++|||+|. .+|...+..       .+.=..+..+..|+++|++++|   +.+++||||||.||++..+..+|+.|||
T Consensus        95 e~y~v~e~m~-~nl~~vi~~-------elDH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~dfg  163 (369)
T KOG0665|consen   95 EVYLVMELMD-ANLCQVILM-------ELDHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDFG  163 (369)
T ss_pred             hHHHHHHhhh-hHHHHHHHH-------hcchHHHHHHHHHHHHHHHHHH---hcceeecccCcccceecchhheeeccch
Confidence            5689999995 599887752       1334567789999999999999   9999999999999999999999999999


Q ss_pred             CCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           92 YSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      +++.-...  -..+....+.+|.|||++.+..+...+||||+||.+ -||++|+-.|+|.+.
T Consensus       164 ~ar~e~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~-gEli~~~Vlf~g~d~  222 (369)
T KOG0665|consen  164 LARTEDTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM-GELILGTVLFPGKDH  222 (369)
T ss_pred             hhcccCcc--cccCchhheeeccCchheeccCCcccchhhhhhhHH-HHHhhceEEecCchH
Confidence            98754332  233456678899999999999999999999999999 999999999998753

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.90  E-value=4.4e-24  Score=155.65  Aligned_cols=137  Identities=22%  Similarity=0.349  Sum_probs=112.1

Q ss_pred             CeEEEEEecCC------CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCLETE------NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~~~------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      +++++++..+.      ..++++||+ +++|.+.+..      ..+++..+..++.|++.|+.++|   +.+++|+|++|
T Consensus        77 v~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp  146 (343)
T cd07880          77 IGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKH------EKLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKP  146 (343)
T ss_pred             cceeeeecCCccccccceEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence            34566666543      348999999 7799887753      35788899999999999999999   89999999999


Q ss_pred             CCEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCC
Q 031436           75 SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        75 ~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .||+++.++.++++|||.+........    ...++..|++||.+.+ ..++.++|+||+|+++ +++++|+.||.+.+
T Consensus       147 ~Nill~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll-~~l~~g~~pf~~~~  220 (343)
T cd07880         147 GNLAVNEDCELKILDFGLARQTDSEMT----GYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIM-AEMLTGKPLFKGHD  220 (343)
T ss_pred             HHEEEcCCCCEEEeecccccccccCcc----ccccCCcccCHHHHhCCCCCCcHHHHHHHHHHH-HHHHhCCCCCCCCC
Confidence            999999999999999998775533221    2345778999999876 3578999999999999 99999999998654

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.90  E-value=3.2e-24  Score=153.89  Aligned_cols=132  Identities=22%  Similarity=0.328  Sum_probs=105.6

Q ss_pred             CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecC
Q 031436           12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFS   91 (159)
Q Consensus        12 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~   91 (159)
                      .+++++||+. +++...+....    ..+++..+..++.|++.++.|||   +.+++|+|++|.||+++.+..++++|||
T Consensus        89 ~~~lv~~~~~-~~l~~~~~~~~----~~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg  160 (311)
T cd07866          89 SVYMVTPYMD-HDLSGLLENPS----VKLTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADFG  160 (311)
T ss_pred             eEEEEEecCC-cCHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECcCc
Confidence            4689999996 47777665432    46889999999999999999999   8999999999999999999999999999


Q ss_pred             CCcccCCCccee----------eeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCC
Q 031436           92 YSESIPEGETRI----------RGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        92 ~~~~~~~~~~~~----------~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ++..........          .....++..|+|||.+.+. .++.++|+||||+++ |+|++|++||.+.+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il-~el~~g~~~~~~~~  231 (311)
T cd07866         161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVF-AEMFTRRPILQGKS  231 (311)
T ss_pred             cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHH-HHHHhCCCCCCCCC
Confidence            876543321110          0112346679999987654 578999999999999 99999999997543

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.90  E-value=7.2e-24  Score=162.83  Aligned_cols=138  Identities=24%  Similarity=0.259  Sum_probs=101.1

Q ss_pred             ecCCCceEEEEecCCCChHHHhhCCCCC---------------CCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecC
Q 031436            8 LETENPVLVFEYVEYGTLADRIYHPRQP---------------NFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNV   72 (159)
Q Consensus         8 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~---------------~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l   72 (159)
                      .++...++++||+.+++|.+.+......               .........+..++.|++.|+.|+|   +.+++||||
T Consensus       205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHRDL  281 (566)
T PLN03225        205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHRDV  281 (566)
T ss_pred             ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeCcC
Confidence            3456789999999999999988643210               0001112345578999999999999   899999999


Q ss_pred             CCCCEEecC-CCceEEEecCCCcccCCCcceeeeeecccccccCccccccC----------------------CCCCCcc
Q 031436           73 KPSNILFQE-QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG----------------------DCNEKCD  129 (159)
Q Consensus        73 ~~~nil~~~-~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~----------------------~~~~~~D  129 (159)
                      ||+|||++. +..+|++|||++...............+++.|+|||.+...                      .++.++|
T Consensus       282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D  361 (566)
T PLN03225        282 KPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD  361 (566)
T ss_pred             CHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence            999999985 56899999999875533222222345678899999965322                      2344569


Q ss_pred             eEeccccccCcceecccccc
Q 031436          130 VYSFDGSRDSGHLTGRAWYR  149 (159)
Q Consensus       130 vwS~g~~~~~~~~~g~~p~~  149 (159)
                      +||+||++ |+|+++..++.
T Consensus       362 VwSlGviL-~el~~~~~~~~  380 (566)
T PLN03225        362 IYSAGLIF-LQMAFPNLRSD  380 (566)
T ss_pred             cHHHHHHH-HHHHhCcCCCc
Confidence            99999999 99998766654

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.90  E-value=9.6e-25  Score=141.93  Aligned_cols=146  Identities=19%  Similarity=0.305  Sum_probs=123.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      ||++.+.-.++++-+|+|||. -+|..++.+.+    +.+..+.+.+++.|++.|+.++|   +.+++|||+||+|+++.
T Consensus        64 vrl~dvlhsdkkltlvfe~cd-qdlkkyfdsln----g~~d~~~~rsfmlqllrgl~fch---shnvlhrdlkpqnllin  135 (292)
T KOG0662|consen   64 VRLHDVLHSDKKLTLVFEFCD-QDLKKYFDSLN----GDLDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLIN  135 (292)
T ss_pred             eehhhhhccCceeEEeHHHhh-HHHHHHHHhcC----CcCCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCcceEEec
Confidence            567777777889999999995 59988887664    45778888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCC-CCCCcceEeccccccCccee-cccccccCCCccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD-CNEKCDVYSFDGSRDSGHLT-GRAWYRSEDWKPA  156 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~~~~  156 (159)
                      .++.+|++|||+++.++-... .-+...-+..|++|.++.+.+ |+++.|+||-||+. .|+.. |++.|++.+-.++
T Consensus       136 ~ngelkladfglarafgipvr-cysaevvtlwyrppdvlfgakly~tsidmwsagcif-aelanagrplfpg~dvddq  211 (292)
T KOG0662|consen  136 RNGELKLADFGLARAFGIPVR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIF-AELANAGRPLFPGNDVDDQ  211 (292)
T ss_pred             cCCcEEecccchhhhcCCceE-eeeceeeeeeccCcceeeeeehhccchHhhhcchHH-HHHhhcCCCCCCCCcHHHH
Confidence            999999999999998865443 233445678899999999876 79999999999998 67665 8899999876543

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.89  E-value=9.2e-24  Score=153.89  Aligned_cols=135  Identities=23%  Similarity=0.376  Sum_probs=108.3

Q ss_pred             eEEEEEecCC------CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC
Q 031436            2 RLIGCCLETE------NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS   75 (159)
Q Consensus         2 ~l~~~~~~~~------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~   75 (159)
                      ++++++....      ..++++||+. .++.+...       ..+++..+..++.|++.|+.+||   +.+++|+|++|.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~  146 (342)
T cd07879          78 GLLDVFTSAVSGDEFQDFYLVMPYMQ-TDLQKIMG-------HPLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPG  146 (342)
T ss_pred             chhheecccccCCCCceEEEEecccc-cCHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHH
Confidence            4556665432      4589999995 47766542       34778888899999999999999   899999999999


Q ss_pred             CEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCC
Q 031436           76 NILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        76 nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ||+++.++.++++|||++.......    ....++..|+|||.+.+ ..++.++|+||||+++ ++|++|+.||.+.+
T Consensus       147 NIll~~~~~~kL~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil-~el~~g~~pf~~~~  219 (342)
T cd07879         147 NLAVNEDCELKILDFGLARHADAEM----TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIM-AEMLTGKTLFKGKD  219 (342)
T ss_pred             HEEECCCCCEEEeeCCCCcCCCCCC----CCceeeecccChhhhcCccccCchHHHHHHHHHH-HHHHhCCCCCCCCC
Confidence            9999999999999999876543221    12245677999999876 4588999999999999 99999999998765

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.89  E-value=3.9e-24  Score=155.91  Aligned_cols=127  Identities=24%  Similarity=0.351  Sum_probs=107.3

Q ss_pred             CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecC
Q 031436           12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFS   91 (159)
Q Consensus        12 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~   91 (159)
                      ..++++||+ +++|.+.+..      .++++..+..++.|++.++.++|   +.+++|+|++|.||+++.+..++++|||
T Consensus        94 ~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~dfg  163 (343)
T cd07851          94 DVYLVTHLM-GADLNNIVKC------QKLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFG  163 (343)
T ss_pred             cEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEcccc
Confidence            478999999 6799888854      35788899999999999999999   8999999999999999999999999999


Q ss_pred             CCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCCC
Q 031436           92 YSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+.......    ....++..|+|||.+.+ ..++.++|+||+|+++ +++++|+.||.+.+.
T Consensus       164 ~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l-~elltg~~pf~~~~~  221 (343)
T cd07851         164 LARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM-AELLTGKTLFPGSDH  221 (343)
T ss_pred             ccccccccc----cCCcccccccCHHHHhCCCCCCchHhHHHHHHHH-HHHHhCCCCCCCCCh
Confidence            877654321    12245677999999865 3678999999999999 999999999976543

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=1e-22  Score=148.07  Aligned_cols=148  Identities=25%  Similarity=0.358  Sum_probs=118.9

Q ss_pred             CeEEEEEe-cCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe
Q 031436            1 MRLIGCCL-ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~   79 (159)
                      |++++++. +...+|-|+|||+|.+|.-.++..     +.+++.+..+++.||+.+|.||-.- +-.|+|-||||-|||+
T Consensus       530 VKlYDyfslDtdsFCTVLEYceGNDLDFYLKQh-----klmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILL  603 (775)
T KOG1151|consen  530 VKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQH-----KLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILL  603 (775)
T ss_pred             eeeeeeeeeccccceeeeeecCCCchhHHHHhh-----hhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEE
Confidence            67888886 456788999999998997777654     5688899999999999999999843 5679999999999999


Q ss_pred             cCC---CceEEEecCCCcccCCCc------ceeeeeecccccccCccccc-c---CCCCCCcceEeccccccCcceeccc
Q 031436           80 QEQ---SVAKLFDFSYSESIPEGE------TRIRGRVMGTFGYLPPEYIA-T---GDCNEKCDVYSFDGSRDSGHLTGRA  146 (159)
Q Consensus        80 ~~~---~~~~l~d~~~~~~~~~~~------~~~~~~~~~~~~~~ape~~~-~---~~~~~~~DvwS~g~~~~~~~~~g~~  146 (159)
                      ...   +.+|+.|||+++.+....      ...++...|+..|++||... +   .+.+.++||||+||+. |.++.|+.
T Consensus       604 v~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIF-yQClYGrK  682 (775)
T KOG1151|consen  604 VNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIF-YQCLYGRK  682 (775)
T ss_pred             ecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhh-hhhhccCC
Confidence            543   578999999998765322      22345666888899999864 3   2468999999999998 99999999


Q ss_pred             ccccCCCcc
Q 031436          147 WYRSEDWKP  155 (159)
Q Consensus       147 p~~~~~~~~  155 (159)
                      ||.....++
T Consensus       683 PFGhnqsQQ  691 (775)
T KOG1151|consen  683 PFGHNQSQQ  691 (775)
T ss_pred             CCCCchhHH
Confidence            998765444

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.89  E-value=1.2e-23  Score=153.25  Aligned_cols=135  Identities=20%  Similarity=0.329  Sum_probs=105.7

Q ss_pred             EecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC-CCce
Q 031436            7 CLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE-QSVA   85 (159)
Q Consensus         7 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~-~~~~   85 (159)
                      +.+....++++||+. ++|.+.+..      ..+++..+..++.|++.|+.|||   +.+++|+|++|.||+++. +..+
T Consensus        85 ~~~~~~~~lv~e~~~-~~L~~~~~~------~~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~~~~~~  154 (342)
T cd07854          85 LTELNSVYIVQEYME-TDLANVLEQ------GPLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINTEDLVL  154 (342)
T ss_pred             ccccceEEEEeeccc-ccHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCceE
Confidence            333456789999996 588887753      34778899999999999999999   899999999999999975 4568


Q ss_pred             EEEecCCCcccCCCccee--eeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCC
Q 031436           86 KLFDFSYSESIPEGETRI--RGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        86 ~l~d~~~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +++|||.+..........  .....++..|+|||.+.. ..++.++|+||||+++ +++++|+.||...+
T Consensus       155 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil-~el~~g~~pf~~~~  223 (342)
T cd07854         155 KIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIF-AEMLTGKPLFAGAH  223 (342)
T ss_pred             EECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHH-HHHHhCCCCCCCCC
Confidence            999999876543221111  111235677999998654 5678899999999999 99999999997543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.88  E-value=3.1e-23  Score=142.03  Aligned_cols=141  Identities=29%  Similarity=0.346  Sum_probs=117.0

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++++.+..+...++++|++.+++|.+.+.....    .++......++.+++.++.++|   +.+++|+|+++.|++++.
T Consensus        61 ~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~  133 (225)
T smart00221       61 KLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGG----KLSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGM  133 (225)
T ss_pred             hheeeeecCCceEEEEeccCCCCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcC
Confidence            466777777889999999998899998876431    1677888889999999999999   889999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCcccc-ccCCCCCCcceEeccccccCcceeccccccc
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI-ATGDCNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~-~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      +..++++|||.+...............+...|++||.. ....++.++|+||||+++ +++++|+.||..
T Consensus       134 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~-~~l~~g~~pf~~  202 (225)
T smart00221      134 DGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVIL-YELLWGPEPFSG  202 (225)
T ss_pred             CCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHH-HHHHHCCCCccc
Confidence            99999999998776654320011223456779999998 666788899999999999 999999999977

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.88  E-value=6.8e-23  Score=140.51  Aligned_cols=129  Identities=22%  Similarity=0.283  Sum_probs=100.8

Q ss_pred             ecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC--CCce
Q 031436            8 LETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE--QSVA   85 (159)
Q Consensus         8 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~--~~~~   85 (159)
                      +..+..++++||++.|+|.+-+..      ..+.+.-.+.++.|+++|+.|||   +++++|||||.+|||+..  ..++
T Consensus        92 qt~d~YvF~qE~aP~gdL~snv~~------~GigE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rv  162 (378)
T KOG1345|consen   92 QTSDAYVFVQEFAPRGDLRSNVEA------AGIGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRV  162 (378)
T ss_pred             hcCceEEEeeccCccchhhhhcCc------ccccHHHHHHHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEE
Confidence            344456688999999999876643      34667777889999999999999   999999999999999953  3589


Q ss_pred             EEEecCCCcccCCCcceeeeeecccccccCccccccC-----CCCCCcceEeccccccCcceeccccccc
Q 031436           86 KLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-----DCNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        86 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-----~~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      |++|||.+...+.-...    ......|-+||.+...     ...+.+|+|.||+++ +.+++|.+||+.
T Consensus       163 KlcDFG~t~k~g~tV~~----~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~-f~cltG~~PWQk  227 (378)
T KOG1345|consen  163 KLCDFGLTRKVGTTVKY----LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIF-FYCLTGKFPWQK  227 (378)
T ss_pred             EeeecccccccCceehh----hhhhcccCCcHHHhhccccceEecccccchheeeee-eeeecCCCcchh
Confidence            99999987655332111    1234457888876432     357889999999999 889999999984

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.88  E-value=7.1e-23  Score=157.05  Aligned_cols=146  Identities=24%  Similarity=0.269  Sum_probs=113.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      ||.+|.=.++...|+..|.|.- +|.+.++...... ....--.....+.|++.|+.+||   +.+++||||||+|||++
T Consensus       566 iRyyc~E~d~qF~YIalELC~~-sL~dlie~~~~d~-~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~  640 (903)
T KOG1027|consen  566 IRYYCSEQDRQFLYIALELCAC-SLQDLIESSGLDV-EMQSDIDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILIS  640 (903)
T ss_pred             EEEEeeccCCceEEEEehHhhh-hHHHHHhccccch-hhcccccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEE
Confidence            4667777778889999999975 9999997631100 11110233567899999999999   89999999999999997


Q ss_pred             C---C--CceEEEecCCCcccCCCcce--eeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           81 E---Q--SVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~---~--~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .   +  .+++|.|||+++.+..+...  ......|+-.|+|||.+....-+.++|++|+||+++|.+..|+-||...
T Consensus       641 ~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~  718 (903)
T KOG1027|consen  641 VPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDS  718 (903)
T ss_pred             ccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCch
Confidence            6   2  46789999999988755432  2345568889999999998888889999999999956666669999764

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.88  E-value=3.4e-23  Score=137.59  Aligned_cols=108  Identities=21%  Similarity=0.194  Sum_probs=91.5

Q ss_pred             CChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecCCCcccCCCcce
Q 031436           23 GTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR  102 (159)
Q Consensus        23 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~  102 (159)
                      |+|.+.+...+    .++++.++..++.|++.|+.|+|   +.+      ||.||+++.+..+++  ||.+.......  
T Consensus         1 GsL~~~l~~~~----~~l~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~--   63 (176)
T smart00750        1 VSLADILEVRG----RPLNEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ--   63 (176)
T ss_pred             CcHHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeecccc--
Confidence            68888886532    46899999999999999999999   666      999999999988888  88776543221  


Q ss_pred             eeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436          103 IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus       103 ~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                          ..++..|+|||.+.+..++.++||||||+++ |+|++|+.||....
T Consensus        64 ----~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il-~elltg~~p~~~~~  108 (176)
T smart00750       64 ----SRVDPYFMAPEVIQGQSYTEKADIYSLGITL-YEALDYELPYNEER  108 (176)
T ss_pred             ----CCCcccccChHHhcCCCCcchhhHHHHHHHH-HHHHhCCCCccccc
Confidence                2467889999999999999999999999999 99999999997653

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.88  E-value=1.5e-22  Score=153.05  Aligned_cols=137  Identities=20%  Similarity=0.196  Sum_probs=101.8

Q ss_pred             CCCceEEEEecCCCChHHHhhCCCCC-------------------CCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEe
Q 031436           10 TENPVLVFEYVEYGTLADRIYHPRQP-------------------NFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFR   70 (159)
Q Consensus        10 ~~~~~lv~e~~~~g~L~~~l~~~~~~-------------------~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~   70 (159)
                      .+..++|+||+++++|.+.+......                   ....+.+..+..++.|++.++.|+|   +.+++||
T Consensus       257 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHr  333 (507)
T PLN03224        257 KGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLH---RIGIVHR  333 (507)
T ss_pred             CCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence            35689999999999999988642110                   0112345667889999999999999   8999999


Q ss_pred             cCCCCCEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCC----------------------CCCc
Q 031436           71 NVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC----------------------NEKC  128 (159)
Q Consensus        71 ~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~----------------------~~~~  128 (159)
                      |+||.||+++.+..+|++|||++................++.|+|||.+.....                      ..+.
T Consensus       334 DLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~  413 (507)
T PLN03224        334 DIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLF  413 (507)
T ss_pred             CCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCcc
Confidence            999999999999999999999886543222111112234678999998754321                      1347


Q ss_pred             ceEeccccccCcceeccc-cccc
Q 031436          129 DVYSFDGSRDSGHLTGRA-WYRS  150 (159)
Q Consensus       129 DvwS~g~~~~~~~~~g~~-p~~~  150 (159)
                      |+||+||++ ++|+++.. |+..
T Consensus       414 DvwSlGvil-~em~~~~l~p~~~  435 (507)
T PLN03224        414 DSYTAGVLL-MQMCVPELRPVAN  435 (507)
T ss_pred             chhhHHHHH-HHHHhCCCCCccc
Confidence            999999999 99999874 7653

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.87  E-value=1.7e-23  Score=142.33  Aligned_cols=137  Identities=20%  Similarity=0.324  Sum_probs=114.4

Q ss_pred             CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEec
Q 031436           11 ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF   90 (159)
Q Consensus        11 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~   90 (159)
                      ..+++||.+|++ +|.-.+....    ..++..++..++.+++.|+.|+|   +..++|||+|+.|+|+++++.+|++||
T Consensus        97 ~t~ylVf~~ceh-DLaGlLsn~~----vr~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklADF  168 (376)
T KOG0669|consen   97 ATFYLVFDFCEH-DLAGLLSNRK----VRFSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLADF  168 (376)
T ss_pred             ceeeeeHHHhhh-hHHHHhcCcc----ccccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEeecc
Confidence            357999999986 8888886532    46888999999999999999999   899999999999999999999999999


Q ss_pred             CCCcccCCCcceee---eeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCCCccc
Q 031436           91 SYSESIPEGETRIR---GRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWKPA  156 (159)
Q Consensus        91 ~~~~~~~~~~~~~~---~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~~~  156 (159)
                      |+++.+........   +...-+..|++||.+.+. .|+++.|+|.-||++ -+|+++++.+++...++.
T Consensus       169 Glar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCim-aeMwtrspimqgnteqqq  237 (376)
T KOG0669|consen  169 GLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIM-AEMWTRSPIMQGNTEQQQ  237 (376)
T ss_pred             ccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHH-HHHHccCccccCChHHHH
Confidence            99977654332221   122347789999999875 689999999999999 999999999998766543

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=2.2e-24  Score=148.28  Aligned_cols=130  Identities=19%  Similarity=0.297  Sum_probs=106.4

Q ss_pred             ceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecCC
Q 031436           13 PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY   92 (159)
Q Consensus        13 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~~   92 (159)
                      +|++.|.|. .+|-..+-     +++.++.+.++-+++||++|++|||   +.+++|||+||-|+++..+-.+|++|||+
T Consensus       132 iYV~TELmQ-SDLHKIIV-----SPQ~Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGL  202 (449)
T KOG0664|consen  132 LYVLTELMQ-SDLHKIIV-----SPQALTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGL  202 (449)
T ss_pred             HHHHHHHHH-hhhhheec-----cCCCCCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEeccccc
Confidence            355666663 46655443     3367888999999999999999999   89999999999999999998899999999


Q ss_pred             CcccCCCcceeeeeecccccccCccccccCC-CCCCcceEeccccccCcceecccccccCC
Q 031436           93 SESIPEGETRIRGRVMGTFGYLPPEYIATGD-CNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ++....+.....+...-+.+|+|||.+.+.. |+...|+||+||+. -|++-.+..|...+
T Consensus       203 ARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIF-aELLgRrILFQAq~  262 (449)
T KOG0664|consen  203 ARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIF-AELLQRKILFQAAG  262 (449)
T ss_pred             ccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHH-HHHHhhhhhhhccC
Confidence            9876544444445556688999999999864 89999999999998 99999888887654

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.87  E-value=2.4e-22  Score=149.50  Aligned_cols=137  Identities=20%  Similarity=0.230  Sum_probs=117.8

Q ss_pred             CeEEEEEecCCCceEEEEecC-CCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe
Q 031436            1 MRLIGCCLETENPVLVFEYVE-YGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~   79 (159)
                      ++++..|++++.+|+++|-.- +.+|.+++...     ..+.+.+.+.+..|++.|+++||   +.+++|||+|-+|+.+
T Consensus       632 lKlLdfFEddd~yyl~te~hg~gIDLFd~IE~k-----p~m~E~eAk~IFkQV~agi~hlh---~~~ivhrdikdenviv  703 (772)
T KOG1152|consen  632 LKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFK-----PRMDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIKDENVIV  703 (772)
T ss_pred             hhhhheeecCCeeEEEecCCCCCcchhhhhhcc-----CccchHHHHHHHHHHHhcccccc---ccCceecccccccEEE
Confidence            578899999999999999753 67888888654     56888899999999999999999   9999999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCC-CCCcceEeccccccCcceecccccc
Q 031436           80 QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC-NEKCDVYSFDGSRDSGHLTGRAWYR  149 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~-~~~~DvwS~g~~~~~~~~~g~~p~~  149 (159)
                      +.++.+|++|||.+.-..+...   ..+.|+..|.|||++.|.+| ...-|+|++|+++ |.++...-||-
T Consensus       704 d~~g~~klidfgsaa~~ksgpf---d~f~gtv~~aapevl~g~~y~gk~qdiwalgill-ytivykenpyy  770 (772)
T KOG1152|consen  704 DSNGFVKLIDFGSAAYTKSGPF---DVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILL-YTIVYKENPYY  770 (772)
T ss_pred             ecCCeEEEeeccchhhhcCCCc---ceeeeeccccchhhhCCCccCCCcchhhhhhhee-eEEEeccCCCc
Confidence            9999999999997654433222   35789999999999999988 5669999999999 99988888874

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.87  E-value=6e-23  Score=141.76  Aligned_cols=138  Identities=28%  Similarity=0.401  Sum_probs=116.8

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++.+.+..+...++++|++.+++|.+.+....     .++......++.+++.++.+||   +.+++|+|++|.||+++.
T Consensus        51 ~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~  122 (244)
T smart00220       51 RLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRG-----RLSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDE  122 (244)
T ss_pred             HHHhheeeCCEEEEEEeCCCCCCHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECC
Confidence            34567777788999999999889999886542     2677888899999999999999   899999999999999999


Q ss_pred             CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceeccccccc
Q 031436           82 QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      +..++++|||.+........  .....++..|++||...+..++.++|+||+|+++ +++++|..||..
T Consensus       123 ~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l-~~l~~~~~p~~~  188 (244)
T smart00220      123 DGHVKLADFGLARQLDPGGL--LTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVIL-YELLTGKPPFPG  188 (244)
T ss_pred             CCcEEEccccceeeeccccc--cccccCCcCCCCHHHHccCCCCchhhHHHHHHHH-HHHHhCCCCCCC
Confidence            99999999998776644321  1223467789999999888889999999999999 999999999976

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.86  E-value=1.7e-22  Score=147.54  Aligned_cols=74  Identities=23%  Similarity=0.340  Sum_probs=64.6

Q ss_pred             CeEEEEEec----CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCC
Q 031436            1 MRLIGCCLE----TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSN   76 (159)
Q Consensus         1 v~l~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~n   76 (159)
                      |+|+..|.+    +.+.|+|+|++ |-+|...+++...   +.++...++.++.|++.||+|||.  .+++||.||||+|
T Consensus       145 V~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~Y---rGlpl~~VK~I~~qvL~GLdYLH~--ecgIIHTDlKPEN  218 (590)
T KOG1290|consen  145 VQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNY---RGLPLSCVKEICRQVLTGLDYLHR--ECGIIHTDLKPEN  218 (590)
T ss_pred             eeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCC---CCCcHHHHHHHHHHHHHHHHHHHH--hcCccccCCCcce
Confidence            567777765    45789999999 7799999987644   778999999999999999999997  7899999999999


Q ss_pred             EEec
Q 031436           77 ILFQ   80 (159)
Q Consensus        77 il~~   80 (159)
                      +|+-
T Consensus       219 vLl~  222 (590)
T KOG1290|consen  219 VLLC  222 (590)
T ss_pred             eeee
Confidence            9983

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.86  E-value=1.8e-22  Score=145.89  Aligned_cols=125  Identities=26%  Similarity=0.328  Sum_probs=102.9

Q ss_pred             CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhh-----cCCCCeEEecCCCCCEEecCCCceE
Q 031436           12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV-----AFSRPIVFRNVKPSNILFQEQSVAK   86 (159)
Q Consensus        12 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-----~~~~~~~h~~l~~~nil~~~~~~~~   86 (159)
                      ++|||.+|.+.|||.|++.+      ..++.+.++.++..+++||.+||.     ..+-.+.|||||..|||+.++..+-
T Consensus       283 QLwLvTdYHe~GSL~DyL~r------~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~  356 (513)
T KOG2052|consen  283 QLWLVTDYHEHGSLYDYLNR------NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC  356 (513)
T ss_pred             EEEEeeecccCCcHHHHHhh------ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEE
Confidence            58999999999999999976      468899999999999999999992     2233588999999999999999999


Q ss_pred             EEecCCCcccCCCc---ceeeeeecccccccCccccccCC----C--CCCcceEeccccccCccee
Q 031436           87 LFDFSYSESIPEGE---TRIRGRVMGTFGYLPPEYIATGD----C--NEKCDVYSFDGSRDSGHLT  143 (159)
Q Consensus        87 l~d~~~~~~~~~~~---~~~~~~~~~~~~~~ape~~~~~~----~--~~~~DvwS~g~~~~~~~~~  143 (159)
                      |+|+|++..-....   ....+...||..|||||++....    |  -..+||||||.++ ||++.
T Consensus       357 IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVl-WEiar  421 (513)
T KOG2052|consen  357 IADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVL-WEIAR  421 (513)
T ss_pred             EeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHH-HHHHH
Confidence            99999986654432   12235567999999999997542    2  2459999999999 98876

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.85  E-value=6.7e-22  Score=141.58  Aligned_cols=146  Identities=18%  Similarity=0.286  Sum_probs=117.8

Q ss_pred             EEEEEe-cCCCceEEEEecCCCChHHHhhCCCC---CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            3 LIGCCL-ETENPVLVFEYVEYGTLADRIYHPRQ---PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         3 l~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      +.|++. +...+++.+.++..|+|..++.-.++   ...+.++..+.+.++.|++.|+.|+|   +.+++|.|+..+|++
T Consensus       352 V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh---~~~ViHkDiAaRNCv  428 (563)
T KOG1024|consen  352 VLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH---NHGVIHKDIAARNCV  428 (563)
T ss_pred             eeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH---hcCcccchhhhhcce
Confidence            456664 45678889999999999999984432   23355777788999999999999999   999999999999999


Q ss_pred             ecCCCceEEEecCCCcccCCCc-ceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           79 FQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        79 ~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      +++.-.+|++|-.+++.+...+ .+.....-.+..||++|.+....|+..+|+||||+++ |||+| |+.||.--|
T Consensus       429 Idd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVll-WELmtlg~~PyaeID  503 (563)
T KOG1024|consen  429 IDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLL-WELMTLGKLPYAEID  503 (563)
T ss_pred             ehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHH-HHHHhcCCCCccccC
Confidence            9999999999988887655433 2332223357889999999999999999999999999 77766 889986543

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.85  E-value=5.6e-22  Score=144.28  Aligned_cols=131  Identities=23%  Similarity=0.301  Sum_probs=106.6

Q ss_pred             CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcC------CCCeEEecCCCCCEEecCCCc
Q 031436           11 ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF------SRPIVFRNVKPSNILFQEQSV   84 (159)
Q Consensus        11 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~------~~~~~h~~l~~~nil~~~~~~   84 (159)
                      ..++||+||.+.|+|.+.++.      ...++....+++..+++||.|||+..      +-.|+|||+|.+|+|+..+..
T Consensus       281 ~eywLVt~fh~kGsL~dyL~~------ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlT  354 (534)
T KOG3653|consen  281 MEYWLVTEFHPKGSLCDYLKA------NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLT  354 (534)
T ss_pred             cceeEEeeeccCCcHHHHHHh------ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCc
Confidence            378999999999999999976      46789999999999999999999431      236899999999999999999


Q ss_pred             eEEEecCCCcccCCCcce-eeeeecccccccCccccccCC-CC-----CCcceEeccccccCcceeccccc
Q 031436           85 AKLFDFSYSESIPEGETR-IRGRVMGTFGYLPPEYIATGD-CN-----EKCDVYSFDGSRDSGHLTGRAWY  148 (159)
Q Consensus        85 ~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~-~~-----~~~DvwS~g~~~~~~~~~g~~p~  148 (159)
                      +.|+|||++..+...... ......||..|||||++.+.. +.     .+.||||+|.++ ||+++.-.-+
T Consensus       355 ccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVL-WEi~SRC~~~  424 (534)
T KOG3653|consen  355 CCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVL-WEIASRCTDA  424 (534)
T ss_pred             EEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHH-HHHHhhcccc
Confidence            999999998876532211 112357899999999997764 22     469999999999 9999874333

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.85  E-value=4.6e-22  Score=157.58  Aligned_cols=124  Identities=26%  Similarity=0.349  Sum_probs=96.5

Q ss_pred             CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecC
Q 031436           12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFS   91 (159)
Q Consensus        12 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~   91 (159)
                      -+||-||||+.-.+.+.+.++.-    .-.......+.+||+.|+.|+|   +.|++||||||.||+++.+..+||+|||
T Consensus       670 ~LYIQMEyCE~~ll~~iI~~N~~----~~~~d~~wrLFreIlEGLaYIH---~~giIHRDLKP~NIFLd~~~~VKIGDFG  742 (1351)
T KOG1035|consen  670 ILYIQMEYCEKTLLRDIIRRNHF----NSQRDEAWRLFREILEGLAYIH---DQGIIHRDLKPRNIFLDSRNSVKIGDFG  742 (1351)
T ss_pred             EEEEEHhhhhhhHHHHHHHhccc----chhhHHHHHHHHHHHHHHHHHH---hCceeeccCCcceeEEcCCCCeeecccc
Confidence            36788999998666666655421    1134566788999999999999   8999999999999999999999999999


Q ss_pred             CCcccC-------------CCc----ceeeeeecccccccCccccccC---CCCCCcceEeccccccCccee
Q 031436           92 YSESIP-------------EGE----TRIRGRVMGTFGYLPPEYIATG---DCNEKCDVYSFDGSRDSGHLT  143 (159)
Q Consensus        92 ~~~~~~-------------~~~----~~~~~~~~~~~~~~ape~~~~~---~~~~~~DvwS~g~~~~~~~~~  143 (159)
                      ++....             ++.    ....+...||..|+|||.+.+.   .|+.|+|+||+|+++ +||+.
T Consensus       743 LAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVl-FEM~y  813 (1351)
T KOG1035|consen  743 LATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVL-FEMLY  813 (1351)
T ss_pred             cchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHH-HHHhc
Confidence            976511             000    0012345688899999998754   499999999999999 88865

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.83  E-value=7.6e-22  Score=132.66  Aligned_cols=136  Identities=20%  Similarity=0.309  Sum_probs=105.8

Q ss_pred             EEEEEec--CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            3 LIGCCLE--TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         3 l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+.+..+  ...+.+++||..+-+.....        ..++.-.+..++.|++.|++|+|   +.|+.|||+||.|++++
T Consensus        98 L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly--------~tl~d~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmId  166 (338)
T KOG0668|consen   98 LLDIVKDPESKTPSLIFEYVNNTDFKQLY--------PTLTDYDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMID  166 (338)
T ss_pred             hhhhhcCccccCchhHhhhhccccHHHHh--------hhhchhhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeec
Confidence            3444443  33567999999887777666        45777788899999999999999   99999999999999998


Q ss_pred             CC-CceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceeccccc-ccCC
Q 031436           81 EQ-SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWY-RSED  152 (159)
Q Consensus        81 ~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~-~~~~  152 (159)
                      .. ..++++|+|++........  -+....+.++..||.+.. +-|+.+-|+|||||++ ..|+..+.|| .|.+
T Consensus       167 h~~rkLrlIDWGLAEFYHp~~e--YnVRVASRyfKGPELLVdy~~YDYSLD~WS~Gcml-A~miFrkepFFhG~d  238 (338)
T KOG0668|consen  167 HELRKLRLIDWGLAEFYHPGKE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML-ASMIFRKEPFFHGHD  238 (338)
T ss_pred             hhhceeeeeecchHhhcCCCce--eeeeeehhhcCCchheeechhccccHHHHHHHHHH-HHHHhccCcccCCCC
Confidence            65 5689999999876643322  123356778899999865 5589999999999999 7777776665 5543

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.83  E-value=3.1e-21  Score=145.42  Aligned_cols=138  Identities=25%  Similarity=0.363  Sum_probs=116.7

Q ss_pred             EEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCC
Q 031436            3 LIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQ   82 (159)
Q Consensus         3 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~   82 (159)
                      .+|.+..+..+|+.||||-+|+|.+.....     .++.+.++...+++.+.|++|+|   +.+-+|||+|-.||++.+.
T Consensus        77 y~gsylr~dklwicMEycgggslQdiy~~T-----gplselqiayvcRetl~gl~ylh---s~gk~hRdiKGanilltd~  148 (829)
T KOG0576|consen   77 YFGSYLRRDKLWICMEYCGGGSLQDIYHVT-----GPLSELQIAYVCRETLQGLKYLH---SQGKIHRDIKGANILLTDE  148 (829)
T ss_pred             HHhhhhhhcCcEEEEEecCCCcccceeeec-----ccchhHHHHHHHhhhhccchhhh---cCCcccccccccceeeccc
Confidence            456666778899999999999999877554     57888999999999999999999   8999999999999999999


Q ss_pred             CceEEEecCCCcccCCCcceeeeeecccccccCccccc---cCCCCCCcceEeccccccCcceeccccccc
Q 031436           83 SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA---TGDCNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        83 ~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~---~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      +.+|++|||.+..++.-..+ ...+.|+++|||||+..   ...|+..+|+|+.|++. .|+..-++|--.
T Consensus       149 gDvklaDfgvsaqitati~K-rksfiGtpywmapEvaaverkggynqlcdiwa~gitA-iel~eLqpplfd  217 (829)
T KOG0576|consen  149 GDVKLADFGVSAQITATIAK-RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITA-IELGELQPPLFD  217 (829)
T ss_pred             CceeecccCchhhhhhhhhh-hhcccCCccccchhHHHHHhcccccccccccccccch-hhhhhcCCcccc
Confidence            99999999998877654332 23468999999999863   45699999999999998 999887776533

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.78  E-value=2e-18  Score=135.47  Aligned_cols=128  Identities=22%  Similarity=0.253  Sum_probs=103.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++...+..++||||+.+++|.+++...     ..+.+..++.++.|++.||.|||   .++++||||||+||+++
T Consensus        67 v~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~-----~~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~  138 (669)
T cd05610          67 VHLYYSLQSANNVYLVMEYLIGGDVKSLLHIY-----GYFDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLIS  138 (669)
T ss_pred             CeEEEEEEECCEEEEEEeCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEc
Confidence            46788888888999999999999999988653     35677888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCC-CCCCcceEeccccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD-CNEKCDVYSFDGSR  137 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~DvwS~g~~~  137 (159)
                      .+..++|+|||+++......... ....+++.|.+||...... -...+++|++|.-.
T Consensus       139 ~~g~vkL~DFGls~~~~~~~~~~-~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g~~~  195 (669)
T cd05610         139 NEGHIKLTDFGLSKVTLNRELNM-MDILTTPSMAKPKNDYSRTPGQVLSLISSLGFNT  195 (669)
T ss_pred             CCCCEEEEeCCCCccccCCcccc-cccccCccccCccccccCCCCceeeeeeecCcCC
Confidence            99999999999987654433222 2345778899999765443 24557888888654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.77  E-value=1.1e-18  Score=117.72  Aligned_cols=131  Identities=30%  Similarity=0.474  Sum_probs=107.2

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++++++......++++|++.+++|.+.+....    ..++......++.+++.++.++|   +.+++|+|++|.||+++.
T Consensus        55 ~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~  127 (215)
T cd00180          55 KLYGVFEDENHLYLVMEYCEGGSLKDLLKENE----GKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDS  127 (215)
T ss_pred             eEeeeeecCCeEEEEEecCCCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeC
Confidence            56777777788999999999899999886532    34678888899999999999999   889999999999999998


Q ss_pred             -CCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcc
Q 031436           82 -QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGH  141 (159)
Q Consensus        82 -~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~  141 (159)
                       ...++++||+.+........ ..........|++||..... .++.+.|+|++|+++ +++
T Consensus       128 ~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~-~~l  187 (215)
T cd00180         128 DNGKVKLADFGLSKLLTSDKS-LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVIL-YEL  187 (215)
T ss_pred             CCCcEEEecCCceEEccCCcc-hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHH-HHH
Confidence             78999999998766544321 11123456779999998776 788999999999998 766

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.77  E-value=1.4e-18  Score=125.80  Aligned_cols=143  Identities=18%  Similarity=0.191  Sum_probs=115.6

Q ss_pred             EEEEE-ecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            3 LIGCC-LETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         3 l~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++... ..+...++||+.+ |.+|.++.....   .+.++......++.|++.+|+++|   +.|++|||+||.|++++.
T Consensus        85 ~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~---~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~  157 (322)
T KOG1164|consen   85 LLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNP---PGRFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQ  157 (322)
T ss_pred             EEEeccCCCceeEEEEecc-CccHHHHHHhCC---CCCcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecC
Confidence            34444 3556779999999 889999876543   267889999999999999999999   999999999999999986


Q ss_pred             C-----CceEEEecCCCc--ccCCCcc------ee-eeeecccccccCccccccCCCCCCcceEeccccccCcceecccc
Q 031436           82 Q-----SVAKLFDFSYSE--SIPEGET------RI-RGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAW  147 (159)
Q Consensus        82 ~-----~~~~l~d~~~~~--~~~~~~~------~~-~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p  147 (159)
                      .     ..+.+.|||+++  .......      .. .....|+..|.++....+.+.+++.|+||++.++ .++..|..|
T Consensus       158 ~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l-~el~~g~LP  236 (322)
T KOG1164|consen  158 SSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYML-LELLKGSLP  236 (322)
T ss_pred             CCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHH-HHHhcCCCC
Confidence            5     358899999998  4322211      11 1235588999999999999999999999999999 999999999


Q ss_pred             cccCCC
Q 031436          148 YRSEDW  153 (159)
Q Consensus       148 ~~~~~~  153 (159)
                      |.+.+.
T Consensus       237 W~~~~~  242 (322)
T KOG1164|consen  237 WEALEM  242 (322)
T ss_pred             Cccccc
Confidence            977653

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.76  E-value=2.2e-18  Score=123.93  Aligned_cols=136  Identities=24%  Similarity=0.331  Sum_probs=106.8

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      .+.+++..++...+|+||+++-...+++..        +...++..+++.+..||.++|   .+|++|||+||.|++++.
T Consensus        99 ~~~~~~rnnd~v~ivlp~~~H~~f~~l~~~--------l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~  167 (418)
T KOG1167|consen   99 KLNGCFRNNDQVAIVLPYFEHDRFRDLYRS--------LSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNR  167 (418)
T ss_pred             cchhhhccCCeeEEEecccCccCHHHHHhc--------CCHHHHHHHHHHHHHHhhhhh---ccCccccCCCcccccccc
Confidence            456677778899999999999888887743        557788899999999999999   999999999999999986


Q ss_pred             C-CceEEEecCCCccc-----------------CC------------------Ccce--------eeeeecccccccCcc
Q 031436           82 Q-SVAKLFDFSYSESI-----------------PE------------------GETR--------IRGRVMGTFGYLPPE  117 (159)
Q Consensus        82 ~-~~~~l~d~~~~~~~-----------------~~------------------~~~~--------~~~~~~~~~~~~ape  117 (159)
                      . ..-.|.|||++...                 ..                  +..+        ..-...|++.|+|||
T Consensus       168 ~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPE  247 (418)
T KOG1167|consen  168 RTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPE  247 (418)
T ss_pred             ccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchH
Confidence            6 56688899986510                 00                  0000        001223678899999


Q ss_pred             cccc-CCCCCCcceEeccccccCcceecccccc
Q 031436          118 YIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYR  149 (159)
Q Consensus       118 ~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~  149 (159)
                      ++.. ...++++|+||.|+++ ..+++++.||=
T Consensus       248 vL~k~~~QttaiDiws~GVI~-Lslls~~~PFf  279 (418)
T KOG1167|consen  248 VLFRCPRQTTAIDIWSAGVIL-LSLLSRRYPFF  279 (418)
T ss_pred             HHhhccCcCCccceeecccee-ehhhccccccc
Confidence            9864 4568999999999999 99999988873

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.75  E-value=2.5e-18  Score=132.59  Aligned_cols=128  Identities=22%  Similarity=0.292  Sum_probs=106.7

Q ss_pred             EEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecCCCcc
Q 031436           16 VFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES   95 (159)
Q Consensus        16 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~~   95 (159)
                      .||||++ +|..++.+.     ..+...++..+..|+..|++|+|   +.|+.|||+|++|+++..++.+|++|||.+..
T Consensus       399 ~mE~~~~-Dlf~~~~~~-----~~~~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg~~~v  469 (601)
T KOG0590|consen  399 SMEYCPY-DLFSLVMSN-----GKLTPLEADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFGAASV  469 (601)
T ss_pred             hhhcccH-HHHHHHhcc-----cccchhhhhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecCccee
Confidence            3999998 999988764     34667777789999999999999   99999999999999999999999999998765


Q ss_pred             cCCCcc---eeeeeecccccccCccccccCCCCC-CcceEeccccccCcceecccccccCCC
Q 031436           96 IPEGET---RIRGRVMGTFGYLPPEYIATGDCNE-KCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        96 ~~~~~~---~~~~~~~~~~~~~ape~~~~~~~~~-~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      ......   ....-..|+..|+|||.+.+.+|.+ ..|+||.|+++ ++|.+|+.||.-..-
T Consensus       470 f~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~-~~m~~~~~~Wk~a~~  530 (601)
T KOG0590|consen  470 FRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIY-ICMILGRFPWKVAKK  530 (601)
T ss_pred             eccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceE-EEEecCCCccccccc
Confidence            443221   2234456788899999999999975 59999999999 999999999976543

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.74  E-value=4.3e-19  Score=133.18  Aligned_cols=134  Identities=23%  Similarity=0.264  Sum_probs=116.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++.-.++.+++.++++++..+|.+...+...     ..+.+.....+..+++.+++++|   +.++++||+|++||+++
T Consensus        60 v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~-----~~f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld  131 (612)
T KOG0603|consen   60 VKLHYAFQTDGKLYLILDFLRGGDLFTRLSKE-----VMFDELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLL  131 (612)
T ss_pred             eeeeeeeccccchhHhhhhcccchhhhccccC-----CchHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeec
Confidence            45667778889999999999999998877654     44677778889999999999999   99999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceeccccccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      .++++++.|||.++........     +|+..|||||+..  .....+|+||||++. +++++|..||.+
T Consensus       132 ~~Ghi~~tdfglske~v~~~~~-----cgt~eymApEI~~--gh~~a~D~ws~gvl~-felltg~~pf~~  193 (612)
T KOG0603|consen  132 LEGHIKLTDFGLSKEAVKEKIA-----CGTYEYRAPEIIN--GHLSAADWWSFGVLA-FELLTGTLPFGG  193 (612)
T ss_pred             ccCccccCCchhhhHhHhhhhc-----ccchhhhhhHhhh--ccCCcccchhhhhhH-HHHhhCCCCCch
Confidence            9999999999998876543322     6899999999987  568899999999999 999999999987

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.73  E-value=5.4e-18  Score=114.94  Aligned_cols=138  Identities=21%  Similarity=0.202  Sum_probs=112.5

Q ss_pred             EEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCC---
Q 031436            6 CCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQ---   82 (159)
Q Consensus         6 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~---   82 (159)
                      +..+.....+||+.+ |.||++++.-+.    ..++..+++-++.|++..++|+|   .++++|||+||+|.|.+-.   
T Consensus        79 y~~e~~ynvlVMdLL-GPsLEdLfnfC~----R~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~  150 (341)
T KOG1163|consen   79 YGTEKDYNVLVMDLL-GPSLEDLFNFCS----RRFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHC  150 (341)
T ss_pred             hccccccceeeeecc-CccHHHHHHHHh----hhhhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeecccccc
Confidence            445667778999999 899999987543    46888999999999999999999   8999999999999998743   


Q ss_pred             CceEEEecCCCcccCCCcce------eeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           83 SVAKLFDFSYSESIPEGETR------IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        83 ~~~~l~d~~~~~~~~~~~~~------~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ..+-++|||+++........      ......||..|.+.....+.+-+.+.|+=|+|.++ .+...|+.||++..
T Consensus       151 ~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvL-mYfnrG~LPWQglk  225 (341)
T KOG1163|consen  151 NKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVL-MYFNRGSLPWQGLK  225 (341)
T ss_pred             ceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhccee-eeeecCCCcccccc
Confidence            45778999999876543221      11234577778887777778889999999999999 99999999998864

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.71  E-value=3.2e-17  Score=117.03  Aligned_cols=145  Identities=30%  Similarity=0.489  Sum_probs=116.4

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++...+......++++|++.++++.+.+......  ..++......+..|++.++.++|   ..+++|||+||.|++++.
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~  136 (384)
T COG0515          62 KLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRK--GPLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDR  136 (384)
T ss_pred             eEEEEEecCCEEEEEEecCCCCcHHHHHHhcccc--cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecC
Confidence            4566666666679999999999999766543211  25778888999999999999999   899999999999999998


Q ss_pred             CC-ceEEEecCCCcccCCCcce-----eeeeecccccccCcccccc---CCCCCCcceEeccccccCcceecccccccCC
Q 031436           82 QS-VAKLFDFSYSESIPEGETR-----IRGRVMGTFGYLPPEYIAT---GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        82 ~~-~~~l~d~~~~~~~~~~~~~-----~~~~~~~~~~~~ape~~~~---~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .. .+++.|||.+.........     ......++..|++||.+.+   ...+...|+||+|+++ ++++.|..||....
T Consensus       137 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~-~~~~~~~~p~~~~~  215 (384)
T COG0515         137 DGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITL-YELLTGLPPFEGEK  215 (384)
T ss_pred             CCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHH-HHHHhCCCCCCCCC
Confidence            87 6999999987754433211     1234567889999999987   5788999999999999 99999999976654

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.71  E-value=2.4e-17  Score=116.24  Aligned_cols=135  Identities=19%  Similarity=0.277  Sum_probs=113.9

Q ss_pred             ecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCC-----
Q 031436            8 LETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQ-----   82 (159)
Q Consensus         8 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~-----   82 (159)
                      .++-+..+|+|.+ |.||+|++.-+.    ..++..++..++.|+...++++|   ++.+|.||+||+|.|++.-     
T Consensus        94 qeG~~NiLVidLL-GPSLEDLFD~Cg----R~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~  165 (449)
T KOG1165|consen   94 QEGKYNILVIDLL-GPSLEDLFDLCG----RRFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDA  165 (449)
T ss_pred             cccchhhhhhhhh-CcCHHHHHHHhc----CcccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCC
Confidence            3455677999999 899999997654    56888999999999999999999   9999999999999999743     


Q ss_pred             CceEEEecCCCcccCCCcce------eeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           83 SVAKLFDFSYSESIPEGETR------IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        83 ~~~~l~d~~~~~~~~~~~~~------~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      ..+.++|||+++.......+      ......|+..||+...-.+.+-+.+.|+=|+|.+. ++.+.|+.||.+.
T Consensus       166 n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvF-mYFLRGsLPWQGL  239 (449)
T KOG1165|consen  166 NVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVF-MYFLRGSLPWQGL  239 (449)
T ss_pred             ceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhh-hhhccCCCccccc
Confidence            34688999999876544322      12346788999999999999999999999999999 8899999999885

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.68  E-value=7.4e-17  Score=120.40  Aligned_cols=144  Identities=24%  Similarity=0.362  Sum_probs=115.4

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCe-EEecCCCCCEEec
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI-VFRNVKPSNILFQ   80 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~-~h~~l~~~nil~~   80 (159)
                      +|+|.+.+++..+.+.+||+.|+|.+.+....    ..+.+.+...+..+++.|+.|+|+   ..+ .|+.++..|++++
T Consensus        11 ~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~----~~~d~~F~~s~~rdi~~Gl~ylh~---s~i~~hg~l~s~nClvd   83 (484)
T KOG1023|consen   11 KFIGASVDGPEMIVIWEYCSRGSLLDILSNED----IKLDYFFILSFIRDISKGLAYLHN---SPIGYHGALKSSNCLVD   83 (484)
T ss_pred             hheeeEecCCceEEEEeeecCccHHhHHhccc----cCccHHHHHHHHHHHHHHHHHHhc---Ccceeeeeeccccceee
Confidence            68999999999999999999999999997632    457777888899999999999994   443 8999999999999


Q ss_pred             CCCceEEEecCCCcccCCC-cceeeeeecccccccCccccccCC-------CCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEG-ETRIRGRVMGTFGYLPPEYIATGD-------CNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~-~~~~~~~~~~~~~~~ape~~~~~~-------~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ..+.+|+.|||+....... .............|.|||.+.+..       .+.+.|+||||+++ +|+++.+.||+...
T Consensus        84 ~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~-~ei~~r~~~~~~~~  162 (484)
T KOG1023|consen   84 SRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIM-YEILFRSGPFDLRN  162 (484)
T ss_pred             eeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHH-HHHHhccCcccccc
Confidence            9999999999987655321 011111112345699999997641       36779999999999 99999999998754


Q ss_pred             C
Q 031436          153 W  153 (159)
Q Consensus       153 ~  153 (159)
                      .
T Consensus       163 ~  163 (484)
T KOG1023|consen  163 L  163 (484)
T ss_pred             c
Confidence            3

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.59  E-value=7.4e-15  Score=107.36  Aligned_cols=96  Identities=17%  Similarity=0.146  Sum_probs=71.9

Q ss_pred             CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecC-CCCCEEecCCCceEEEe
Q 031436           11 ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNV-KPSNILFQEQSVAKLFD   89 (159)
Q Consensus        11 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l-~~~nil~~~~~~~~l~d   89 (159)
                      +..+++|||+++++|.. ...      .  .   ...++.|++.++.++|   +.+++|||| ||.||+++.+..++++|
T Consensus        91 ~~~~LVmE~~~G~~L~~-~~~------~--~---~~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~ikLiD  155 (365)
T PRK09188         91 GKDGLVRGWTEGVPLHL-ARP------H--G---DPAWFRSAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEAAVID  155 (365)
T ss_pred             CCcEEEEEccCCCCHHH-hCc------c--c---hHHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCEEEEE
Confidence            56799999999989963 211      0  0   1357789999999999   899999999 99999998888899999


Q ss_pred             cCCCcccCCCcceee-------eeecccccccCcccccc
Q 031436           90 FSYSESIPEGETRIR-------GRVMGTFGYLPPEYIAT  121 (159)
Q Consensus        90 ~~~~~~~~~~~~~~~-------~~~~~~~~~~ape~~~~  121 (159)
                      ||+++..........       ....++..|+|||.+..
T Consensus       156 FGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        156 FQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             CccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence            999886543321100       22345667889998854

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.55  E-value=6.6e-15  Score=101.02  Aligned_cols=98  Identities=14%  Similarity=0.194  Sum_probs=73.4

Q ss_pred             CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEe
Q 031436           10 TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFD   89 (159)
Q Consensus        10 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d   89 (159)
                      .+..+++|||++|.+|.+...         .+.    ....+++.++..+|   +.+++|+|++|.|++++.++ ++++|
T Consensus       115 ~~~~~lvmEyi~G~tL~~~~~---------~~~----~~~~~i~~~l~~lH---~~gi~H~Dikp~Nili~~~g-i~liD  177 (232)
T PRK10359        115 AHTYIMLIEYIEGVELNDMPE---------ISE----DVKAKIKASIESLH---QHGMVSGDPHKGNFIVSKNG-LRIID  177 (232)
T ss_pred             cCCeEEEEEEECCccHHHhhh---------ccH----HHHHHHHHHHHHHH---HcCCccCCCChHHEEEeCCC-EEEEE
Confidence            356789999999989977631         122    24568899999999   99999999999999999888 99999


Q ss_pred             cCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccc
Q 031436           90 FSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSR  137 (159)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~  137 (159)
                      ||...........             ........++.++|+||||+++
T Consensus       178 fg~~~~~~e~~a~-------------d~~vler~y~~~~di~~lg~~~  212 (232)
T PRK10359        178 LSGKRCTAQRKAK-------------DRIDLERHYGIKNEIKDLGYYL  212 (232)
T ss_pred             CCCcccccchhhH-------------HHHHHHhHhcccccccceeEee
Confidence            9876544221110             1133444567899999999997

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.54  E-value=3.1e-15  Score=103.54  Aligned_cols=137  Identities=20%  Similarity=0.308  Sum_probs=101.7

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      .++|.|.+..++.++..||+.|+|+..+....+   -.....+.++++.++++|+.|||+. +.-+...-|....++++.
T Consensus       251 pvlgacnsppnlv~isq~mp~gslynvlhe~t~---vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmide  326 (448)
T KOG0195|consen  251 PVLGACNSPPNLVIISQYMPFGSLYNVLHEQTS---VVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDE  326 (448)
T ss_pred             hhhhhccCCCCceEeeeeccchHHHHHHhcCcc---EEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecc
Confidence            357889999999999999999999999987532   3456678889999999999999953 222334478888888887


Q ss_pred             CCceE--EEecCCCcccCCCcceeeeeecccccccCccccccCCC---CCCcceEeccccccCcceecccccccC
Q 031436           82 QSVAK--LFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC---NEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        82 ~~~~~--l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~---~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      +-..+  .+|-.++-.      .. + ....+.|++||.+...+-   -.++|+|||.+++ ||+.|...||...
T Consensus       327 dltarismad~kfsfq------e~-g-r~y~pawmspealqrkped~n~raadmwsfaill-wel~trevpfadl  392 (448)
T KOG0195|consen  327 DLTARISMADTKFSFQ------EV-G-RAYSPAWMSPEALQRKPEDLNIRAADMWSFAILL-WELNTREVPFADL  392 (448)
T ss_pred             hhhhheecccceeeee------cc-c-cccCcccCCHHHHhcCchhcchhhhhHHHHHHHH-HHhhccccccccC
Confidence            75443  344322111      11 1 134678999999976653   3679999999999 9999999999754

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.53  E-value=9.1e-15  Score=116.44  Aligned_cols=127  Identities=24%  Similarity=0.235  Sum_probs=102.7

Q ss_pred             CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC-------C
Q 031436           10 TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE-------Q   82 (159)
Q Consensus        10 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~-------~   82 (159)
                      .+.-++++||.+.|+|.+.+...     +.+.+..+..++.|++.-+++||   +.+|||+||||+|.++-.       .
T Consensus       766 ~~~S~lv~ey~~~Gtlld~~N~~-----~~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~  837 (974)
T KOG1166|consen  766 QNASVLVSEYSPYGTLLDLINTN-----KVMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDS  837 (974)
T ss_pred             CCcceeeeeccccccHHHhhccC-----CCCCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCCCcc
Confidence            34457899999999999999633     66888889999999999999999   999999999999999943       2


Q ss_pred             CceEEEecCCCcccCCC--cceeeeeecccccccCccccccCCCCCCcceEeccccccCcceeccc
Q 031436           83 SVAKLFDFSYSESIPEG--ETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRA  146 (159)
Q Consensus        83 ~~~~l~d~~~~~~~~~~--~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~  146 (159)
                      ..++|+|||.+.-+.--  ..+. .....+-.+-|+|+..|.+++.++|.+.+..++ +.|+.|+.
T Consensus       838 ~~l~lIDfG~siDm~lfp~~~~F-~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~-h~mLFG~y  901 (974)
T KOG1166|consen  838 KGLYLIDFGRSIDMKLFPDGTKF-KAVWHTDLFDCIEMREGRPWTYQIDYFGLAATV-HVMLFGKY  901 (974)
T ss_pred             cceEEEecccceeeeEcCCCcEE-eeeeccccchhHHHhcCCCCchhhhhHHHHHHH-HHHHHHHH
Confidence            35899999987654321  1111 122345567899999999999999999999999 99999863

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.52  E-value=4.2e-14  Score=95.19  Aligned_cols=75  Identities=19%  Similarity=0.257  Sum_probs=61.6

Q ss_pred             ceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHh-hhcCCCCeEEecCCCCCEEecCCCceEEEecC
Q 031436           13 PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL-HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFS   91 (159)
Q Consensus        13 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l-h~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~   91 (159)
                      .++||||++++++.......     ..++......++.|++.++.++ |   +.+++|||+||.||+++. ..++++|||
T Consensus        92 ~~iVmE~i~g~~l~~~~~~~-----~~~~~~~~~~i~~qi~~~L~~l~H---~~giiHrDlkP~NIli~~-~~v~LiDFG  162 (190)
T cd05147          92 HVLVMEFIGDDGWAAPRLKD-----APLSESKARELYLQVIQIMRILYQ---DCRLVHADLSEYNLLYHD-GKLYIIDVS  162 (190)
T ss_pred             CEEEEEEeCCCCCcchhhhc-----CCCCHHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEEC-CcEEEEEcc
Confidence            48999999877665443221     3577888899999999999998 8   789999999999999984 679999999


Q ss_pred             CCccc
Q 031436           92 YSESI   96 (159)
Q Consensus        92 ~~~~~   96 (159)
                      ++...
T Consensus       163 ~a~~~  167 (190)
T cd05147         163 QSVEH  167 (190)
T ss_pred             ccccC
Confidence            87644

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.49  E-value=1e-15  Score=113.27  Aligned_cols=123  Identities=29%  Similarity=0.401  Sum_probs=99.9

Q ss_pred             CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecC
Q 031436           12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFS   91 (159)
Q Consensus        12 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~   91 (159)
                      .+++.|++|+-.+|.+-+.+.+.  ....+...++.+..|++.+++|      ++.+|+|++|.||.+..+..+|+.|||
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~--~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFg  401 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRT--GEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFG  401 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCc--ccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhh
Confidence            47899999999999998864432  1445666777888899888876      668999999999999988889999999


Q ss_pred             CCcccCCCc-----ceeeeeecccccccCccccccCCCCCCcceEeccccccCccee
Q 031436           92 YSESIPEGE-----TRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT  143 (159)
Q Consensus        92 ~~~~~~~~~-----~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~  143 (159)
                      +........     ....+...++..||+||-+.++.|+.++|+||+|+++ +|++.
T Consensus       402 l~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil-~EL~~  457 (516)
T KOG1033|consen  402 LVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLIL-AELLI  457 (516)
T ss_pred             heeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHH-HHHHH
Confidence            876554433     1123455689999999999999999999999999999 88876

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.49  E-value=1.3e-13  Score=92.79  Aligned_cols=75  Identities=16%  Similarity=0.221  Sum_probs=61.8

Q ss_pred             ceEEEEecCCCChHHH-hhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCC-CCeEEecCCCCCEEecCCCceEEEec
Q 031436           13 PVLVFEYVEYGTLADR-IYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS-RPIVFRNVKPSNILFQEQSVAKLFDF   90 (159)
Q Consensus        13 ~~lv~e~~~~g~L~~~-l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~-~~~~h~~l~~~nil~~~~~~~~l~d~   90 (159)
                      .++||||++++++... +..      ..++......++.|++.++.++|   . .+++|+|++|.||+++ +..++++||
T Consensus        92 ~~lVmE~~~g~~~~~~~l~~------~~~~~~~~~~i~~~l~~~l~~lH---~~~givHrDlkP~NIll~-~~~~~liDF  161 (190)
T cd05145          92 NVLVMEFIGDDGSPAPRLKD------VPLEEEEAEELYEQVVEQMRRLY---QEAGLVHGDLSEYNILYH-DGKPYIIDV  161 (190)
T ss_pred             CEEEEEEecCCCchhhhhhh------ccCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCChhhEEEE-CCCEEEEEc
Confidence            4899999987755433 322      34567778889999999999999   7 9999999999999998 778999999


Q ss_pred             CCCcccC
Q 031436           91 SYSESIP   97 (159)
Q Consensus        91 ~~~~~~~   97 (159)
                      |++....
T Consensus       162 G~a~~~~  168 (190)
T cd05145         162 SQAVELD  168 (190)
T ss_pred             ccceecC
Confidence            9887654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.48  E-value=1.3e-15  Score=107.42  Aligned_cols=131  Identities=21%  Similarity=0.266  Sum_probs=85.5

Q ss_pred             ceEEEEecCCCChHHHhhCCC--CCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEec
Q 031436           13 PVLVFEYVEYGTLADRIYHPR--QPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF   90 (159)
Q Consensus        13 ~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~   90 (159)
                      .+++|+-+. ++|.+++..-.  ..........-...+..|++..++++|   +.|++|+|++|+|++++.++.+.++||
T Consensus       114 ~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh---~~GlVHgdi~~~nfll~~~G~v~Lg~F  189 (288)
T PF14531_consen  114 RFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLH---SYGLVHGDIKPENFLLDQDGGVFLGDF  189 (288)
T ss_dssp             EEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEE-TTS-EEE--G
T ss_pred             hhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHh---hcceEecccceeeEEEcCCCCEEEcCh
Confidence            467788774 58888755211  000122333444567789999999999   899999999999999999999999999


Q ss_pred             CCCcccCCCcceeeeeecccccccCcccccc--------CCCCCCcceEeccccccCcceecccccccCC
Q 031436           91 SYSESIPEGETRIRGRVMGTFGYLPPEYIAT--------GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~--------~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +.......   .... ...+..+.+||....        ..++.+.|.|++|+++ |.++++..||....
T Consensus       190 ~~~~r~g~---~~~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~l-y~lWC~~lPf~~~~  254 (288)
T PF14531_consen  190 SSLVRAGT---RYRC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITL-YSLWCGRLPFGLSS  254 (288)
T ss_dssp             GGEEETTE---EEEG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHH-HHHHHSS-STCCCG
T ss_pred             HHHeecCc---eeec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHH-HHHHHccCCCCCCC
Confidence            75443322   1111 234566888987643        2468889999999999 99999999998653

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.44  E-value=1.4e-13  Score=92.98  Aligned_cols=124  Identities=15%  Similarity=0.056  Sum_probs=84.8

Q ss_pred             CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecC-CCCCEEecCCCceEEEe
Q 031436           11 ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNV-KPSNILFQEQSVAKLFD   89 (159)
Q Consensus        11 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l-~~~nil~~~~~~~~l~d   89 (159)
                      +..+++|||+.|.+|.+....      .      ...+..|++.++.++|   +.|++|+|| +|.||+++.++.++++|
T Consensus        71 ~~~~lvmeyI~G~~L~~~~~~------~------~~~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LID  135 (218)
T PRK12274         71 DGRHLDRSYLAGAAMYQRPPR------G------DLAYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVID  135 (218)
T ss_pred             cCEEEEEeeecCccHHhhhhh------h------hHHHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEE
Confidence            446899999998888653311      1      1246788999999999   999999999 79999999888999999


Q ss_pred             cCCCcccCCCcce----e--------eeeecccccccCccccccC-CCC-CCcceEeccccccCcceeccccccc
Q 031436           90 FSYSESIPEGETR----I--------RGRVMGTFGYLPPEYIATG-DCN-EKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        90 ~~~~~~~~~~~~~----~--------~~~~~~~~~~~ape~~~~~-~~~-~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      ||++.........    .        ..-...++.++.|+-.... ..+ ...++.+.|..+ |.++|+..|+-+
T Consensus       136 FG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~-~~~~~~~~~~~~  209 (218)
T PRK12274        136 FQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPV-YRFVTRRVLHWE  209 (218)
T ss_pred             CCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchH-HHHHhccCCccc
Confidence            9998754332210    0        0001123334444432222 233 556778999999 999999877644

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.43  E-value=2.3e-14  Score=113.55  Aligned_cols=97  Identities=27%  Similarity=0.354  Sum_probs=82.7

Q ss_pred             HHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecCCCcccCCCcc--------------eeeeeecccccccCc
Q 031436           51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET--------------RIRGRVMGTFGYLPP  116 (159)
Q Consensus        51 ~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~--------------~~~~~~~~~~~~~ap  116 (159)
                      +++.+++|+|   .-+++|||+||+|.++..-++.|+.|||+++.......              .......++++|.||
T Consensus       151 dmvla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaP  227 (1205)
T KOG0606|consen  151 DMVLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAP  227 (1205)
T ss_pred             hhhHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccCh
Confidence            3467899999   89999999999999999999999999999775432211              012344689999999


Q ss_pred             cccccCCCCCCcceEeccccccCcceecccccccC
Q 031436          117 EYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus       117 e~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      |++..+.|...+|||++|+++ |+.+-|..||-+.
T Consensus       228 eVilrqgygkpvdwwamGiIl-yeFLVgcvpffGd  261 (1205)
T KOG0606|consen  228 EVILRQGYGKPVDWWAMGIIL-YEFLVGCVPFFGD  261 (1205)
T ss_pred             hhhhhhccCCCccHHHHHHHH-HHHheeeeeccCC
Confidence            999999999999999999999 9999999999886

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.39  E-value=6.5e-13  Score=96.36  Aligned_cols=130  Identities=15%  Similarity=0.161  Sum_probs=94.6

Q ss_pred             CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec--CC--Cce
Q 031436           10 TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ--EQ--SVA   85 (159)
Q Consensus        10 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~--~~--~~~   85 (159)
                      +..+|+||.-... +|...+...      ..+.....-++.|++.++.|||   +.++.|||+|.+|||+.  ++  ..+
T Consensus       315 ~~tlylvMkrY~~-tLr~yl~~~------~~s~r~~~~~laQlLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~L  384 (598)
T KOG4158|consen  315 PKTLYLVMKRYRQ-TLREYLWTR------HRSYRTGRVILAQLLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQL  384 (598)
T ss_pred             CceEEEehhcchh-hHHHHHhcC------CCchHHHHHHHHHHHHHHHHHH---HccchhhcccccceEEEecCCCCcEE
Confidence            4467899987754 888877543      2334444557899999999999   99999999999999993  33  356


Q ss_pred             EEEecCCCcccCCC-----cceeeeeecccccccCccccccCC------CCCCcceEeccccccCcceeccccccc
Q 031436           86 KLFDFSYSESIPEG-----ETRIRGRVMGTFGYLPPEYIATGD------CNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        86 ~l~d~~~~~~~~~~-----~~~~~~~~~~~~~~~ape~~~~~~------~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      .++|||.+....+.     ..+.....-|+...||||+....+      .-.|+|.|+.|.+. ||++..+-||-+
T Consensus       385 VvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~Gala-YEIfg~~NPFY~  459 (598)
T KOG4158|consen  385 VVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALA-YEIFGRSNPFYK  459 (598)
T ss_pred             EEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhH-HHHhccCCcccc
Confidence            78899976543221     111112234677789999875321      23689999999999 999999999966

>PRK10345 hypothetical protein; Provisional

Probab=99.35  E-value=5.1e-12  Score=86.16  Aligned_cols=83  Identities=19%  Similarity=0.167  Sum_probs=62.8

Q ss_pred             CeEEEEEecCC---Cce-EEEEe--cCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHH-HHhhhcCCCCeEEecCC
Q 031436            1 MRLIGCCLETE---NPV-LVFEY--VEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGI-AYLHVAFSRPIVFRNVK   73 (159)
Q Consensus         1 v~l~~~~~~~~---~~~-lv~e~--~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l-~~lh~~~~~~~~h~~l~   73 (159)
                      ++++|++.++.   ..+ +|+||  +.+|+|.+.++..      .+++.  ..++.|++.++ +|||   +.+++|||+|
T Consensus        64 vr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~------~~~e~--~~~~~~~L~~l~~yLh---~~~IvhrDlK  132 (210)
T PRK10345         64 PRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQC------RYEED--VAQLRQLLKKLKRYLL---DNRIVTMELK  132 (210)
T ss_pred             ceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHcc------cccHh--HHHHHHHHHHHHHHHH---HCCEeecCCC
Confidence            57889888753   334 78999  5578999999652      23443  35678888777 8999   9999999999


Q ss_pred             CCCEEecCC----CceEEEe-cCCCc
Q 031436           74 PSNILFQEQ----SVAKLFD-FSYSE   94 (159)
Q Consensus        74 ~~nil~~~~----~~~~l~d-~~~~~   94 (159)
                      |+||++++.    ..++++| ||...
T Consensus       133 p~NILl~~~~~~~~~~~LiDg~G~~~  158 (210)
T PRK10345        133 PQNILCQRISESEVIPVVCDNIGEST  158 (210)
T ss_pred             HHHEEEeccCCCCCcEEEEECCCCcc
Confidence            999999743    3799999 45433

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.31  E-value=1e-12  Score=101.87  Aligned_cols=148  Identities=24%  Similarity=0.339  Sum_probs=115.2

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++++...+.+..++++|+..++++.+.+...   +....+......+..|+..++.|+|.  ..++.|+|++|+|.+++.
T Consensus        85 ~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~---~~~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~  159 (601)
T KOG0590|consen   85 HMIEPSSSPRSYLLSLSYSDGGSLFSKISHP---DSTGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDE  159 (601)
T ss_pred             ccCCccCCCcccccccCcccccccccccccC---CccCCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhcc
Confidence            3455556667788999998898888777321   11245556667789999999999995  577999999999999998


Q ss_pred             CC-ceEEEecCCCcccCC-Ccc-eeeeeecc-cccccCccccccCC-CCCCcceEeccccccCcceecccccccCCCcc
Q 031436           82 QS-VAKLFDFSYSESIPE-GET-RIRGRVMG-TFGYLPPEYIATGD-CNEKCDVYSFDGSRDSGHLTGRAWYRSEDWKP  155 (159)
Q Consensus        82 ~~-~~~l~d~~~~~~~~~-~~~-~~~~~~~~-~~~~~ape~~~~~~-~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~~  155 (159)
                      .. ..++.||+++..... +.. .......| ++.|.|||...+.. ..+..|+||.|+++ ..+++|..|+.....+.
T Consensus       160 s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l-~~~~~g~~p~~~~~~~~  237 (601)
T KOG0590|consen  160 SGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVL-SAMLTGELPWDFPSRKD  237 (601)
T ss_pred             CCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccc-cccccCCCCcccccccc
Confidence            88 899999999877765 332 22334456 88999999998854 47889999999999 99999999997765543

>smart00090 RIO RIO-like kinase

Probab=99.30  E-value=1e-11  Score=86.37  Aligned_cols=77  Identities=18%  Similarity=0.183  Sum_probs=61.2

Q ss_pred             CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCC-eEEecCCCCCEEecCCCceEEEec
Q 031436           12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRP-IVFRNVKPSNILFQEQSVAKLFDF   90 (159)
Q Consensus        12 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~-~~h~~l~~~nil~~~~~~~~l~d~   90 (159)
                      ..++||||+.++++.......     ..........++.|++.++.++|   ..+ ++|+|++|.||+++ +..++++||
T Consensus       122 ~~~lV~E~~~g~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH---~~g~iiH~Dikp~NIli~-~~~i~LiDF  192 (237)
T smart00090      122 RNVLVMEFIGGDGLPAPRLKD-----VEPEEEEEFELYDDILEEMRKLY---KEGELVHGDLSEYNILVH-DGKVVIIDV  192 (237)
T ss_pred             CceEEEEEecCCccccccccc-----CCcchHHHHHHHHHHHHHHHHHH---hcCCEEeCCCChhhEEEE-CCCEEEEEC
Confidence            458999999887776543221     22344556788999999999999   899 99999999999998 778999999


Q ss_pred             CCCcccC
Q 031436           91 SYSESIP   97 (159)
Q Consensus        91 ~~~~~~~   97 (159)
                      |.+....
T Consensus       193 g~a~~~~  199 (237)
T smart00090      193 SQSVELD  199 (237)
T ss_pred             hhhhccC
Confidence            9876543

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.25  E-value=5.9e-11  Score=80.97  Aligned_cols=77  Identities=29%  Similarity=0.404  Sum_probs=64.8

Q ss_pred             EEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCce
Q 031436            6 CCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVA   85 (159)
Q Consensus         6 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~   85 (159)
                      ++...+..+++|||++|++|.+.+...     .   . ....++.+++.++.++|   ..+++|+|++|.||+++ +..+
T Consensus        67 ~~~~~~~~~lv~e~~~G~~L~~~~~~~-----~---~-~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~  133 (211)
T PRK14879         67 YFVDPENFIIVMEYIEGEPLKDLINSN-----G---M-EELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKI  133 (211)
T ss_pred             EEEeCCCCEEEEEEeCCcCHHHHHHhc-----c---H-HHHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCE
Confidence            444567788999999999999887542     1   1 56678899999999999   89999999999999998 6778


Q ss_pred             EEEecCCCcc
Q 031436           86 KLFDFSYSES   95 (159)
Q Consensus        86 ~l~d~~~~~~   95 (159)
                      +++|||.+..
T Consensus       134 ~liDf~~a~~  143 (211)
T PRK14879        134 YLIDFGLAEF  143 (211)
T ss_pred             EEEECCcccC
Confidence            9999998764

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.25  E-value=3.3e-11  Score=92.98  Aligned_cols=75  Identities=21%  Similarity=0.268  Sum_probs=63.3

Q ss_pred             EEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCc
Q 031436            5 GCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSV   84 (159)
Q Consensus         5 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~   84 (159)
                      .++.+....+++|||+++++|.+.+.             ....++.+++.++.++|   +.+++|||++|.||++ .+..
T Consensus       403 ~~~~~~~~~~lv~E~~~g~~L~~~l~-------------~~~~~~~~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~  465 (535)
T PRK09605        403 IYDVDPEEKTIVMEYIGGKDLKDVLE-------------GNPELVRKVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDR  465 (535)
T ss_pred             EEEEeCCCCEEEEEecCCCcHHHHHH-------------HHHHHHHHHHHHHHHHH---hCCCccCCCChHHEEE-ECCc
Confidence            34455667899999999999988774             23457899999999999   8999999999999999 5678


Q ss_pred             eEEEecCCCccc
Q 031436           85 AKLFDFSYSESI   96 (159)
Q Consensus        85 ~~l~d~~~~~~~   96 (159)
                      ++++|||++...
T Consensus       466 ~~liDFGla~~~  477 (535)
T PRK09605        466 LYLIDFGLGKYS  477 (535)
T ss_pred             EEEEeCcccccC
Confidence            999999988754

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.23  E-value=7.9e-11  Score=82.04  Aligned_cols=70  Identities=21%  Similarity=0.238  Sum_probs=57.4

Q ss_pred             eEEEEecCC-CChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecCC
Q 031436           14 VLVFEYVEY-GTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY   92 (159)
Q Consensus        14 ~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~~   92 (159)
                      ++++|++++ .+|.+.+...      .++..    .+.+++.++.++|   +.|++|+|++|.||+++.+..++++|||.
T Consensus       122 ~lV~e~l~G~~~L~~~l~~~------~l~~~----~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~v~LIDfg~  188 (239)
T PRK01723        122 DILIERIEGARDLVALLQEA------PLSEE----QWQAIGQLIARFH---DAGVYHADLNAHNILLDPDGKFWLIDFDR  188 (239)
T ss_pred             eEEEEecCCCCCHHHHHhcC------CCCHH----HHHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCCCEEEEECCC
Confidence            599999996 6888877532      23332    3578999999999   99999999999999999888899999997


Q ss_pred             Cccc
Q 031436           93 SESI   96 (159)
Q Consensus        93 ~~~~   96 (159)
                      +...
T Consensus       189 ~~~~  192 (239)
T PRK01723        189 GELR  192 (239)
T ss_pred             cccC
Confidence            7654

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.22  E-value=7.8e-11  Score=79.72  Aligned_cols=74  Identities=27%  Similarity=0.377  Sum_probs=61.4

Q ss_pred             EecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceE
Q 031436            7 CLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAK   86 (159)
Q Consensus         7 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~   86 (159)
                      +...+..+++|||++|++|.+.+...     ..       .++.+++.++.++|   +.+++|+|++|.|++++ +..++
T Consensus        66 ~~~~~~~~lv~e~~~g~~l~~~~~~~-----~~-------~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~  129 (199)
T TIGR03724        66 DVDPDNKTIVMEYIEGKPLKDVIEEG-----ND-------ELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLY  129 (199)
T ss_pred             EEECCCCEEEEEEECCccHHHHHhhc-----HH-------HHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEE
Confidence            33456678999999999998877432     11       57899999999999   89999999999999998 77899


Q ss_pred             EEecCCCccc
Q 031436           87 LFDFSYSESI   96 (159)
Q Consensus        87 l~d~~~~~~~   96 (159)
                      ++|||.+...
T Consensus       130 liDfg~a~~~  139 (199)
T TIGR03724       130 LIDFGLGKYS  139 (199)
T ss_pred             EEECCCCcCC
Confidence            9999987643

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.22  E-value=1.1e-12  Score=104.67  Aligned_cols=126  Identities=20%  Similarity=0.234  Sum_probs=88.3

Q ss_pred             eEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecCCC
Q 031436           14 VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS   93 (159)
Q Consensus        14 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~~~   93 (159)
                      |+|=+|..+ +|+|++.-.     .-+..-+++-++.|++.|+..+|   +.++.|+|||.+|||+..=.++.+.||...
T Consensus        97 ylvRqyvkh-nLyDRlSTR-----PFL~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsF  167 (1431)
T KOG1240|consen   97 YLVRQYVKH-NLYDRLSTR-----PFLVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASF  167 (1431)
T ss_pred             HHHHHHHhh-hhhhhhccc-----hHHHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhccccc
Confidence            455567754 888888421     23455667778999999999999   999999999999999987777889999754


Q ss_pred             cccC--CCcce----eeeeecccccccCcccccc----------CC-CCCCcceEeccccccCccee-cccccc
Q 031436           94 ESIP--EGETR----IRGRVMGTFGYLPPEYIAT----------GD-CNEKCDVYSFDGSRDSGHLT-GRAWYR  149 (159)
Q Consensus        94 ~~~~--~~~~~----~~~~~~~~~~~~ape~~~~----------~~-~~~~~DvwS~g~~~~~~~~~-g~~p~~  149 (159)
                      +...  .+...    .-.+-....-|.|||-...          .. .+++-||+|.||++ .|+++ |++||.
T Consensus       168 KPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCVi-aELf~Eg~PlF~  240 (1431)
T KOG1240|consen  168 KPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVI-AELFLEGRPLFT  240 (1431)
T ss_pred             CCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHH-HHHHhcCCCccc
Confidence            4321  11110    0011122334899997633          12 56889999999999 66555 799985

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.19  E-value=1.2e-10  Score=78.93  Aligned_cols=74  Identities=18%  Similarity=0.145  Sum_probs=60.7

Q ss_pred             CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEec
Q 031436           11 ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF   90 (159)
Q Consensus        11 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~   90 (159)
                      ...+++|||+++++|......           .....++.+++.++.++|   ..+++|+|++|.|++++.+..++++||
T Consensus       104 ~~~~lv~e~~~g~~L~~~~~~-----------~~~~~~~~~i~~~l~~lh---~~gi~H~Dl~p~Nill~~~~~~~liDf  169 (198)
T cd05144         104 NRHAVVMEYIDGVELYRVRVL-----------EDPEEVLDEILEEIVKAY---KHGIIHGDLSEFNILVDDDEKIYIIDW  169 (198)
T ss_pred             CCceEEEEEeCCcchhhcccc-----------ccHHHHHHHHHHHHHHHH---HCCCCcCCCCcccEEEcCCCcEEEEEC
Confidence            456899999999888654320           223467889999999999   899999999999999998889999999


Q ss_pred             CCCcccCC
Q 031436           91 SYSESIPE   98 (159)
Q Consensus        91 ~~~~~~~~   98 (159)
                      |.+.....
T Consensus       170 g~~~~~~~  177 (198)
T cd05144         170 PQMVSTDH  177 (198)
T ss_pred             CccccCCC
Confidence            98765543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.03  E-value=2.4e-09  Score=68.68  Aligned_cols=82  Identities=21%  Similarity=0.291  Sum_probs=63.1

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++++....++..++++||+.++++...            +......++.+++.++..+|.....+++|+|++|.|+++++
T Consensus        57 ~~~~~~~~~~~~~~v~e~~~g~~~~~~------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~  124 (155)
T cd05120          57 KVLASGESDGWSYLLMEWIEGETLDEV------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDD  124 (155)
T ss_pred             eEEEEcCCCCccEEEEEecCCeecccC------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEEC
Confidence            455666666788999999987666432            23344567889999999999432257999999999999998


Q ss_pred             CCceEEEecCCCcc
Q 031436           82 QSVAKLFDFSYSES   95 (159)
Q Consensus        82 ~~~~~l~d~~~~~~   95 (159)
                      ...+++.||+.+..
T Consensus       125 ~~~~~l~Df~~~~~  138 (155)
T cd05120         125 GKILGIIDWEYAGY  138 (155)
T ss_pred             CcEEEEEecccccC
Confidence            88899999987653

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.03  E-value=1.2e-09  Score=73.15  Aligned_cols=76  Identities=18%  Similarity=0.199  Sum_probs=58.3

Q ss_pred             CceEEEEecCCCChHH-HhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCC-CCeEEecCCCCCEEecCCCceEEEe
Q 031436           12 NPVLVFEYVEYGTLAD-RIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS-RPIVFRNVKPSNILFQEQSVAKLFD   89 (159)
Q Consensus        12 ~~~lv~e~~~~g~L~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~-~~~~h~~l~~~nil~~~~~~~~l~d   89 (159)
                      ..+++|||++++++.. .+....      . ......++.+++.++.++|   . .+++|+|++|.|++++ +..++++|
T Consensus        89 ~~~lv~e~~~g~~~~~~~l~~~~------~-~~~~~~~~~~~~~~l~~lh---~~~~ivH~Dl~p~Nili~-~~~~~liD  157 (187)
T cd05119          89 RHVLVMEFIGGDGIPAPRLKDVR------L-LEDPEELYDQILELMRKLY---REAGLVHGDLSEYNILVD-DGKVYIID  157 (187)
T ss_pred             CCEEEEEEeCCCCccChhhhhhh------h-cccHHHHHHHHHHHHHHHh---hccCcCcCCCChhhEEEE-CCcEEEEE
Confidence            5689999998855432 121110      0 1456678999999999999   7 9999999999999999 78899999


Q ss_pred             cCCCcccCC
Q 031436           90 FSYSESIPE   98 (159)
Q Consensus        90 ~~~~~~~~~   98 (159)
                      ||.+.....
T Consensus       158 fg~a~~~~~  166 (187)
T cd05119         158 VPQAVEIDH  166 (187)
T ss_pred             CcccccccC
Confidence            998765543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.01  E-value=2.6e-10  Score=81.23  Aligned_cols=132  Identities=17%  Similarity=0.237  Sum_probs=95.7

Q ss_pred             CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEec
Q 031436           11 ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF   90 (159)
Q Consensus        11 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~   90 (159)
                      .+..++.||++.|++.+++++.+. +...+....-.+|+.||..||.|||++ +-.++|+++.-+.+.+..++.+|+..-
T Consensus       145 ~rviFiteymssgs~~~fLkrt~~-~~~a~~~~~wkkw~tqIlsal~yLhs~-~PpiihgnlTc~tifiq~ngLIkig~~  222 (458)
T KOG1266|consen  145 PRVIFITEYMSSGSLKQFLKRTKK-NQKALFQKAWKKWCTQILSALSYLHSC-DPPIIHGNLTCDTIFIQHNGLIKIGSV  222 (458)
T ss_pred             cceEEEEecccchhHHHHHHHHHH-hhhhhhHHHHHHHHHHHHhhhhhhhcc-CCccccCCcchhheeecCCceEEeccc
Confidence            345788999999999999987543 225567777789999999999999976 567999999999999998887776432


Q ss_pred             CCC-cccCCC--cceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecc
Q 031436           91 SYS-ESIPEG--ETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGR  145 (159)
Q Consensus        91 ~~~-~~~~~~--~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~  145 (159)
                      .-. ....-+  ....+....+.+++.+||+-..-..+..+|||+||.+. .+|.-+.
T Consensus       223 ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcA-lemailE  279 (458)
T KOG1266|consen  223 APDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCA-LEMAILE  279 (458)
T ss_pred             CccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHH-HHHHHhe
Confidence            110 000000  01112233456778899987666778899999999887 7776654

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.98  E-value=7.5e-11  Score=93.15  Aligned_cols=83  Identities=20%  Similarity=0.269  Sum_probs=59.7

Q ss_pred             ecCCCC-CEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccc
Q 031436           70 RNVKPS-NILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAW  147 (159)
Q Consensus        70 ~~l~~~-nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p  147 (159)
                      +...|. |+++......++.+|+.+........ .......|++.|+|||.+.+..++.++|+|||||++ |||++|+.|
T Consensus       501 ~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il-~ElltG~~p  579 (669)
T cd05610         501 QKPRPHGNLYQTPKQVKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAVDWWALGVCL-FEFLTGIPP  579 (669)
T ss_pred             CCCCCCCceeECCccccccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHHHHHHHHHHH-HHHHHCCCC
Confidence            444444 44555445556677887655432221 122335689999999999999999999999999999 999999999


Q ss_pred             cccCCC
Q 031436          148 YRSEDW  153 (159)
Q Consensus       148 ~~~~~~  153 (159)
                      |.+.+.
T Consensus       580 f~~~~~  585 (669)
T cd05610         580 FNDETP  585 (669)
T ss_pred             CCCCCH
Confidence            987643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.97  E-value=2.4e-10  Score=91.34  Aligned_cols=139  Identities=22%  Similarity=0.245  Sum_probs=104.5

Q ss_pred             cCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEE
Q 031436            9 ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLF   88 (159)
Q Consensus         9 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~   88 (159)
                      ...+..++++|..+++|...+....     ....+-...+...+..+.++||   .....|++++|.+++....+..++.
T Consensus       875 ~rsP~~L~~~~~~~~~~~Skl~~~~-----~~saepaRs~i~~~vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~~l~  946 (1205)
T KOG0606|consen  875 CRSPLPLVGHYLNGGDLPSKLHNSG-----CLSAEPARSPILERVQSLESLH---SSLRKHRDLKPDSLLIAYDGHRPLT  946 (1205)
T ss_pred             CCCCcchhhHHhccCCchhhhhcCC-----CcccccccchhHHHHhhhhccc---cchhhcccccccchhhcccCCcccC
Confidence            4567889999999999998886542     2333334456777888999999   6668999999999999887777777


Q ss_pred             ecCCCcc---------------------cCCC---------cceeeeeecccccccCccccccCCCCCCcceEecccccc
Q 031436           89 DFSYSES---------------------IPEG---------ETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRD  138 (159)
Q Consensus        89 d~~~~~~---------------------~~~~---------~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~  138 (159)
                      +++....                     ....         .........++..|.+||.+.+......+|+|++|+++ 
T Consensus       947 ~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l- 1025 (1205)
T KOG0606|consen  947 DFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCL- 1025 (1205)
T ss_pred             ccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhh-
Confidence            7752111                     0000         00112334567889999999999999999999999999 


Q ss_pred             CcceecccccccCCCccc
Q 031436          139 SGHLTGRAWYRSEDWKPA  156 (159)
Q Consensus       139 ~~~~~g~~p~~~~~~~~~  156 (159)
                      ++.++|.+||..+.-++.
T Consensus      1026 ~e~l~g~pp~na~tpq~~ 1043 (1205)
T KOG0606|consen 1026 FEVLTGIPPFNAETPQQI 1043 (1205)
T ss_pred             hhhhcCCCCCCCcchhhh
Confidence            999999999998776654

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.81  E-value=2.9e-08  Score=66.99  Aligned_cols=76  Identities=13%  Similarity=0.177  Sum_probs=54.9

Q ss_pred             CCceEEEEecCCCChH-HHhhCCCCCCCCccchhhHHHHHHHHHHHHHHh-hhcCCCCeEEecCCCCCEEecCCCceEEE
Q 031436           11 ENPVLVFEYVEYGTLA-DRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL-HVAFSRPIVFRNVKPSNILFQEQSVAKLF   88 (159)
Q Consensus        11 ~~~~lv~e~~~~g~L~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l-h~~~~~~~~h~~l~~~nil~~~~~~~~l~   88 (159)
                      ..-+++|||+.+..+. ..++.      ..++......+..+++.++..+ |   ..+++|+||++.||++.. ..+.++
T Consensus        97 ~~~~lvME~Ig~~~~~~~~Lkd------~~~~~~~~~~i~~~i~~~l~~l~H---~~glVHGDLs~~NIL~~~-~~v~iI  166 (197)
T cd05146          97 KKHVLVMSFIGDDQVPAPKLKD------AKLNDEEMKNAYYQVLSMMKQLYK---ECNLVHADLSEYNMLWHD-GKVWFI  166 (197)
T ss_pred             cCCEEEEEEcCCCCccchhhhc------cccCHHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEC-CcEEEE
Confidence            4568999999654332 12222      1233344556778999999888 8   899999999999999974 568999


Q ss_pred             ecCCCccc
Q 031436           89 DFSYSESI   96 (159)
Q Consensus        89 d~~~~~~~   96 (159)
                      ||+.+...
T Consensus       167 DF~qav~~  174 (197)
T cd05146         167 DVSQSVEP  174 (197)
T ss_pred             ECCCceeC
Confidence            99976544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.74  E-value=9.9e-09  Score=77.70  Aligned_cols=143  Identities=19%  Similarity=0.209  Sum_probs=104.4

Q ss_pred             EEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHH----HHHHhhhcCCCCeEEecCCCCCEE
Q 031436            3 LIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAY----GIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         3 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~----~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      .+-.+..++..++-.|.| +.+|.+......    .-++.........+...    |+.++|   ...++|.|++|.|+.
T Consensus       183 ~~~~~e~~~~lfiqtE~~-~~sl~~~~~~~~----~~~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp~~i~  254 (524)
T KOG0601|consen  183 DSPAWEGSGILFIQTELC-GESLQSYCHTPC----NFLPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKPANIF  254 (524)
T ss_pred             cCcccccCCcceeeeccc-cchhHHhhhccc----ccCCchhhhhHHhhhhhcccccccccC---CCcccccccchhhee
Confidence            345667788899999999 467777664321    22556666677777777    999999   899999999999999


Q ss_pred             ecCC-CceEEEecCCCcccCCCcc----eeeeeecccccccCccccccCCCCCCcceEeccccccCcceec-cccccc--
Q 031436           79 FQEQ-SVAKLFDFSYSESIPEGET----RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTG-RAWYRS--  150 (159)
Q Consensus        79 ~~~~-~~~~l~d~~~~~~~~~~~~----~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g-~~p~~~--  150 (159)
                      ...+ ..+++.||++...+.....    .+.....+...|++||++.+ -++..+|++|+|.++ .+...+ +.|-.+  
T Consensus       255 ~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~-l~~~l~~~~~~~g~~  332 (524)
T KOG0601|consen  255 TTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVI-LEAILGSHLPSVGKN  332 (524)
T ss_pred             cccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhh-HhhHhhcccccCCCC
Confidence            9988 7788899998766654331    11222356677999998754 478899999999998 766666 355555  


Q ss_pred             CCCcc
Q 031436          151 EDWKP  155 (159)
Q Consensus       151 ~~~~~  155 (159)
                      ..|++
T Consensus       333 ~~W~~  337 (524)
T KOG0601|consen  333 SSWSQ  337 (524)
T ss_pred             CCccc
Confidence            45544

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.72  E-value=1.5e-08  Score=78.21  Aligned_cols=101  Identities=22%  Similarity=0.308  Sum_probs=76.3

Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecCCCcccCCCc--------ceeeeeecccccccCcccc
Q 031436           48 IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE--------TRIRGRVMGTFGYLPPEYI  119 (159)
Q Consensus        48 ~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~--------~~~~~~~~~~~~~~ape~~  119 (159)
                      -+.+++.|+.++|.  +.+++|+++.|++|.+...+.+|+..|+++.....+.        ............|.|||++
T Consensus       104 nl~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~  181 (700)
T KOG2137|consen  104 NLGNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYL  181 (700)
T ss_pred             hhhcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhh
Confidence            34566689999996  6789999999999999999999999988754433211        1111112234569999999


Q ss_pred             ccCCCCCCcceEeccccccCcce-ecccccccC
Q 031436          120 ATGDCNEKCDVYSFDGSRDSGHL-TGRAWYRSE  151 (159)
Q Consensus       120 ~~~~~~~~~DvwS~g~~~~~~~~-~g~~p~~~~  151 (159)
                      .+...+.++|++|+|+.+ |.+. .|+..+.+.
T Consensus       182 ~~~~~~~~sd~fSlG~li-~~i~~~gk~i~~a~  213 (700)
T KOG2137|consen  182 LGTTNTPASDVFSLGVLI-YTIYNGGKSIIAAN  213 (700)
T ss_pred             ccccccccccceeeeeEE-EEEecCCcchhhcc
Confidence            998889999999999999 7777 667666554

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.72  E-value=1.2e-07  Score=67.08  Aligned_cols=77  Identities=14%  Similarity=0.153  Sum_probs=60.5

Q ss_pred             CceEEEEecCCC-ChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC-------CC
Q 031436           12 NPVLVFEYVEYG-TLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE-------QS   83 (159)
Q Consensus        12 ~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~-------~~   83 (159)
                      .-++|+|++++- +|.+.+.....   ..........++.+++..+.-||   ..|++|+|+++.||+++.       +.
T Consensus       109 ~s~LVte~l~~~~sL~~~~~~~~~---~~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~~~  182 (268)
T PRK15123        109 TSFIITEDLAPTISLEDYCADWAT---NPPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPGREEDL  182 (268)
T ss_pred             eeEEEEeeCCCCccHHHHHHhhcc---cCCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccCCCCCc
Confidence            467999999864 78888753211   23344556678899999999999   999999999999999975       35


Q ss_pred             ceEEEecCCCc
Q 031436           84 VAKLFDFSYSE   94 (159)
Q Consensus        84 ~~~l~d~~~~~   94 (159)
                      .+.++||+.+.
T Consensus       183 ~~~LIDl~r~~  193 (268)
T PRK15123        183 KLSVIDLHRAQ  193 (268)
T ss_pred             eEEEEECCccc
Confidence            78899998764

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.69  E-value=1.6e-07  Score=62.30  Aligned_cols=73  Identities=26%  Similarity=0.403  Sum_probs=57.4

Q ss_pred             ecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEE
Q 031436            8 LETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKL   87 (159)
Q Consensus         8 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l   87 (159)
                      .+...-.++|||.+|-.|.+.+...+            ..++..+..-+.-||   ..+++|+||++.|+++.... +.+
T Consensus        69 vD~~~~~I~me~I~G~~lkd~l~~~~------------~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~  132 (204)
T COG3642          69 VDPDNGLIVMEYIEGELLKDALEEAR------------PDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYF  132 (204)
T ss_pred             EcCCCCEEEEEEeCChhHHHHHHhcc------------hHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEE
Confidence            44566679999999888877885431            235666666778899   99999999999999997765 888


Q ss_pred             EecCCCccc
Q 031436           88 FDFSYSESI   96 (159)
Q Consensus        88 ~d~~~~~~~   96 (159)
                      +|||++...
T Consensus       133 IDfGLg~~s  141 (204)
T COG3642         133 IDFGLGEFS  141 (204)
T ss_pred             EECCccccc
Confidence            999998743

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.69  E-value=7e-08  Score=72.88  Aligned_cols=77  Identities=17%  Similarity=0.211  Sum_probs=57.7

Q ss_pred             CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHH-HHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEe
Q 031436           11 ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAY-GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFD   89 (159)
Q Consensus        11 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~-~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d   89 (159)
                      +..+++|||++|++|.+......    ...   ....++..++. .+..+|   ..|++|+|++|.||++..++.++++|
T Consensus       231 ~~~vLvmE~i~G~~L~~~~~~~~----~~~---~~~~ia~~~~~~~l~ql~---~~g~~H~D~hPgNilv~~~g~i~liD  300 (437)
T TIGR01982       231 SERVLTMEWIDGIPLSDIAALDE----AGL---DRKALAENLARSFLNQVL---RDGFFHADLHPGNIFVLKDGKIIALD  300 (437)
T ss_pred             CCceEEEEeECCcccccHHHHHh----cCC---CHHHHHHHHHHHHHHHHH---hCCceeCCCCcccEEECCCCcEEEEe
Confidence            45689999999999988654211    111   12234455544 367788   89999999999999999989999999


Q ss_pred             cCCCcccC
Q 031436           90 FSYSESIP   97 (159)
Q Consensus        90 ~~~~~~~~   97 (159)
                      ||++..+.
T Consensus       301 fG~~~~l~  308 (437)
T TIGR01982       301 FGIVGRLS  308 (437)
T ss_pred             CCCeeECC
Confidence            99987664

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.62  E-value=5.1e-07  Score=59.94  Aligned_cols=84  Identities=23%  Similarity=0.298  Sum_probs=59.9

Q ss_pred             EecCCCceEEEEecCC-CChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCC--
Q 031436            7 CLETENPVLVFEYVEY-GTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQS--   83 (159)
Q Consensus         7 ~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~--   83 (159)
                      +.+.+.-.++|||+++ .++.+++...-.   ..........++..+...+.-||   .++++|+||...||++..++  
T Consensus        79 ~~D~~~~~i~ME~~~g~~~vk~~i~~~~~---~~~~d~~~~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~  152 (229)
T KOG3087|consen   79 FIDTYGGQIYMEFIDGASTVKDFILSTME---DESEDEGLAELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQ  152 (229)
T ss_pred             EEecCCCeEEEEeccchhHHHHHHHHHcc---CcccchhHHHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCc
Confidence            4455667899999965 477777765321   11112222567788888899999   99999999999999986543  


Q ss_pred             -ceEEEecCCCccc
Q 031436           84 -VAKLFDFSYSESI   96 (159)
Q Consensus        84 -~~~l~d~~~~~~~   96 (159)
                       .+.++|||++...
T Consensus       153 ~~~~lIdfgls~~s  166 (229)
T KOG3087|consen  153 ITPILIDFGLSSVS  166 (229)
T ss_pred             CceEEEeecchhcc
Confidence             4578999987543

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.57  E-value=3.3e-07  Score=60.24  Aligned_cols=68  Identities=26%  Similarity=0.332  Sum_probs=51.2

Q ss_pred             CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCC-----eEEecCCCCCEEecCCCce
Q 031436           11 ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRP-----IVFRNVKPSNILFQEQSVA   85 (159)
Q Consensus        11 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~-----~~h~~l~~~nil~~~~~~~   85 (159)
                      ...+++||++++.++.+.-          .   .......+++..+..||   ..+     ++|+|++|.|++++ +..+
T Consensus        64 ~~~~lv~e~i~G~~l~~~~----------~---~~~~~~~~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~  126 (170)
T cd05151          64 ETGVLITEFIEGSELLTED----------F---SDPENLEKIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRL  126 (170)
T ss_pred             CCCeEEEEecCCCcccccc----------c---cCHHHHHHHHHHHHHHh---CCCCCCceeecCCCCcCcEEEE-CCeE
Confidence            3458999999987775320          0   01234678899999999   665     59999999999998 5578


Q ss_pred             EEEecCCCcc
Q 031436           86 KLFDFSYSES   95 (159)
Q Consensus        86 ~l~d~~~~~~   95 (159)
                      +++||+.+..
T Consensus       127 ~liDf~~a~~  136 (170)
T cd05151         127 WLIDWEYAGM  136 (170)
T ss_pred             EEEecccccC
Confidence            9999987653

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.56  E-value=3.1e-07  Score=62.71  Aligned_cols=75  Identities=25%  Similarity=0.224  Sum_probs=60.3

Q ss_pred             ceEEEEecCC-CChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCC---ceEEE
Q 031436           13 PVLVFEYVEY-GTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQS---VAKLF   88 (159)
Q Consensus        13 ~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~---~~~l~   88 (159)
                      -++++|++++ -+|.+.+....     .........++.+++..+.-||   ..|++|+|+++.|||+..+.   .+.++
T Consensus        92 s~lite~l~~~~~L~~~~~~~~-----~~~~~~~~~ll~~l~~~i~~lH---~~gi~H~Dl~~~NILv~~~~~~~~~~lI  163 (206)
T PF06293_consen   92 SYLITEALPGAQDLRDLLQQWE-----QLDPSQRRELLRALARLIAKLH---DAGIYHGDLNPSNILVDPDDGQYRFYLI  163 (206)
T ss_pred             EEEEEEeCCCcccHHHHHHhhc-----ccchhhHHHHHHHHHHHHHHHH---HCcCCCCCCCcccEEEeCCCCceeEEEE
Confidence            4799999986 47888886532     1344556678899999999999   99999999999999998776   78899


Q ss_pred             ecCCCcc
Q 031436           89 DFSYSES   95 (159)
Q Consensus        89 d~~~~~~   95 (159)
                      ||+.+..
T Consensus       164 Dld~~~~  170 (206)
T PF06293_consen  164 DLDRMRF  170 (206)
T ss_pred             cchhcee
Confidence            9986554

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.53  E-value=6.4e-08  Score=73.43  Aligned_cols=136  Identities=21%  Similarity=0.193  Sum_probs=96.6

Q ss_pred             EEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCC-Cc
Q 031436            6 CCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQ-SV   84 (159)
Q Consensus         6 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~-~~   84 (159)
                      .+.+.++.++-.|||+++++.....-.     ..+.+...+.+..|++.++.++|   +..++|+|++|.||++..+ ..
T Consensus       334 ~W~~~r~~~ip~e~~~~~s~~l~~~~~-----~~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i~~~~~~  405 (524)
T KOG0601|consen  334 SWSQLRQGYIPLEFCEGGSSSLRSVTS-----QMLDEDPRLRLTAQILTALNVIH---SKLFVHLDVKPSNILISNDGFF  405 (524)
T ss_pred             CccccccccCchhhhcCcchhhhhHHH-----HhcCcchhhhhHHHHHhcccccc---chhhhcccccccceeeccchhh
Confidence            344556667889999988887665221     44667778889999999999999   8999999999999999876 67


Q ss_pred             eEEEecCCCcccCCCcceeeeeecccccc-cCccccccCCCCCCcceEeccccccCcceecc-cccccCCC
Q 031436           85 AKLFDFSYSESIPEGETRIRGRVMGTFGY-LPPEYIATGDCNEKCDVYSFDGSRDSGHLTGR-AWYRSEDW  153 (159)
Q Consensus        85 ~~l~d~~~~~~~~~~~~~~~~~~~~~~~~-~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~-~p~~~~~~  153 (159)
                      .++.|++....+......   .......| .++.......+..+.|++|||..+ .+.+++. .+..+.+|
T Consensus       406 ~~~~~~~~~t~~~~~~~~---~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~-~e~~~~~~ls~~~~~~  472 (524)
T KOG0601|consen  406 SKLGDFGCWTRLAFSSGV---FHHIDRLYPIAEILLEDYPHLSKADIFSLGLSV-DEAITGSPLSESGVQS  472 (524)
T ss_pred             hhccccccccccceeccc---ccccccccccchhhccccccccccccccccccc-cccccCcccCcccccc
Confidence            788888865432221110   01122233 245555566789999999999999 8888886 45554444

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.49  E-value=6.7e-07  Score=60.06  Aligned_cols=74  Identities=24%  Similarity=0.291  Sum_probs=47.3

Q ss_pred             CceEEEEecC--CCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHH-HHhhhcCCCCeEEecCCCCCEEecCCCceEEE
Q 031436           12 NPVLVFEYVE--YGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGI-AYLHVAFSRPIVFRNVKPSNILFQEQSVAKLF   88 (159)
Q Consensus        12 ~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l-~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~   88 (159)
                      .-.+||||+.  |..+ ..+...      .+.......+..+++..+ ..+|   ..|++|+|+++.||+++.+ .+.++
T Consensus        80 ~~~ivME~I~~~G~~~-~~l~~~------~~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-~~~iI  148 (188)
T PF01163_consen   80 RNVIVMEYIGEDGVPL-PRLKDV------DLSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-KVYII  148 (188)
T ss_dssp             TTEEEEE--EETTEEG-GCHHHC------GGGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-CEEE-
T ss_pred             CCEEEEEecCCCccch-hhHHhc------cccchhHHHHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-eEEEE
Confidence            4579999997  5444 333321      112334455667777744 4468   8999999999999999887 79999


Q ss_pred             ecCCCccc
Q 031436           89 DFSYSESI   96 (159)
Q Consensus        89 d~~~~~~~   96 (159)
                      ||+.+...
T Consensus       149 Df~qav~~  156 (188)
T PF01163_consen  149 DFGQAVDS  156 (188)
T ss_dssp             -GTTEEET
T ss_pred             ecCcceec
Confidence            99876544

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=98.39  E-value=3.9e-07  Score=70.46  Aligned_cols=126  Identities=15%  Similarity=0.079  Sum_probs=87.2

Q ss_pred             EEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCC
Q 031436            3 LIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQ   82 (159)
Q Consensus         3 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~   82 (159)
                      ++......+..|+|.|-+.  .|...++..        ....+.--+.||+.||.+||.  +++++|+++.-..+.++..
T Consensus        74 yL~t~e~~~~~ylvTErV~--Pl~~~lk~l--------~~~~v~~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~  141 (690)
T KOG1243|consen   74 YLDTTEEEGTLYLVTERVR--PLETVLKEL--------GKEEVCLGLFQILAALSFLND--DCNLVHGNVCKDSVFVNES  141 (690)
T ss_pred             hhhhhcccCceEEEeeccc--cHHHHHHHh--------HHHHHHHHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCC
Confidence            4555666778899999984  777777543        233334457999999999985  7889999999999999999


Q ss_pred             CceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceec
Q 031436           83 SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTG  144 (159)
Q Consensus        83 ~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g  144 (159)
                      +..|+++|........... ..........+..|+.+....  -..|.|-||+++ ++++.|
T Consensus       142 GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li-~el~ng  199 (690)
T KOG1243|consen  142 GEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLI-EELFNG  199 (690)
T ss_pred             CcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCccc--cchhhhhHHHHH-HHHhCc
Confidence            9999999875543322111 000011122345555543322  346999999999 999998

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.39  E-value=8.3e-07  Score=65.88  Aligned_cols=132  Identities=17%  Similarity=0.168  Sum_probs=91.7

Q ss_pred             EEEEecCCC-ChHHHhh-CCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecCC
Q 031436           15 LVFEYVEYG-TLADRIY-HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY   92 (159)
Q Consensus        15 lv~e~~~~g-~L~~~l~-~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~~   92 (159)
                      +.|..+++- .+..++. ..++++.....|+..+..++.++.+...+|   ..|..-+|++++|+|++++..+.+.|-..
T Consensus        87 flmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVdsDs  163 (637)
T COG4248          87 FLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDSDS  163 (637)
T ss_pred             EecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEcccc
Confidence            455555542 2222222 224455566788999999999999999999   89988899999999999999999887542


Q ss_pred             CcccCCCcceeeeeecccccccCccccc-----cCCCCCCcceEeccccccCcceecccccccC
Q 031436           93 SESIPEGETRIRGRVMGTFGYLPPEYIA-----TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~ape~~~-----~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      -..- .+.. ..-...+..+|++||.-.     +-.-+...|.+.+|++||.-++.|+-||++-
T Consensus       164 fqi~-~ng~-~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI  225 (637)
T COG4248         164 FQIN-ANGT-LHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGI  225 (637)
T ss_pred             eeec-cCCc-eEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence            2111 1111 111235678899999654     3345678999999999944444459999875

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.33  E-value=9.6e-07  Score=68.09  Aligned_cols=77  Identities=13%  Similarity=0.107  Sum_probs=51.4

Q ss_pred             CCceEEEEecCCCChHHHh--hCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCC----c
Q 031436           11 ENPVLVFEYVEYGTLADRI--YHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQS----V   84 (159)
Q Consensus        11 ~~~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~----~   84 (159)
                      +..++||||+.|+++.+.-  ...+ ...+.+....+..++.       .+.   ..|++|+|++|.||+++.++    .
T Consensus       234 t~~VLvmE~i~G~~l~d~~~l~~~g-~d~~~la~~~v~~~~~-------Qif---~~GffHaDpHPGNIlv~~~g~~~~~  302 (537)
T PRK04750        234 SETVMVMERMYGIPVSDVAALRAAG-TDMKLLAERGVEVFFT-------QVF---RDGFFHADMHPGNIFVSYDPPENPR  302 (537)
T ss_pred             CCceEEEeeecCccHHhHHHHHhcC-CCHHHHHHHHHHHHHH-------HHH---hCCeeeCCCChHHeEEecCCCCCCe
Confidence            4567999999999997742  2111 0111222222222223       334   68899999999999998876    8


Q ss_pred             eEEEecCCCcccCC
Q 031436           85 AKLFDFSYSESIPE   98 (159)
Q Consensus        85 ~~l~d~~~~~~~~~   98 (159)
                      ++++|||+...+..
T Consensus       303 i~llDFGivg~l~~  316 (537)
T PRK04750        303 YIALDFGIVGSLNK  316 (537)
T ss_pred             EEEEecceEEECCH
Confidence            99999998776643

>PRK09902 hypothetical protein; Provisional

Probab=98.05  E-value=3.6e-05  Score=52.52  Aligned_cols=76  Identities=18%  Similarity=0.165  Sum_probs=59.5

Q ss_pred             ceEEEEecCC-CChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCc--eEEEe
Q 031436           13 PVLVFEYVEY-GTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSV--AKLFD   89 (159)
Q Consensus        13 ~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~--~~l~d   89 (159)
                      -+||+|-+.+ -+|.+.+.....   .+.+..+...+..+++..+.-||   +.++.|+|+.+.||+++.++.  +.++|
T Consensus       100 A~LVTe~L~g~~~L~~~l~~~~~---~~~~~~~k~~il~~va~~ia~LH---~~Gv~Hgdly~khIll~~~g~~~v~lID  173 (216)
T PRK09902        100 ALLVTEDMAGFISIADWYAQHAV---SPYSDEVRQAMLKAVALAFKKMH---SVNRQHGCCYVRHIYVKTEGKAEAGFLD  173 (216)
T ss_pred             EEEEEEeCCCCccHHHHHhcCCc---CCcchHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHhheeecCCCCeeEEEEE
Confidence            4689998852 578777754321   34566667788999999999999   999999999999999975555  88999


Q ss_pred             cCCCc
Q 031436           90 FSYSE   94 (159)
Q Consensus        90 ~~~~~   94 (159)
                      |.-++
T Consensus       174 lEk~r  178 (216)
T PRK09902        174 LEKSR  178 (216)
T ss_pred             hhccc
Confidence            96544

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.97  E-value=1.8e-05  Score=54.29  Aligned_cols=66  Identities=24%  Similarity=0.312  Sum_probs=50.0

Q ss_pred             CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecC
Q 031436           12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFS   91 (159)
Q Consensus        12 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~   91 (159)
                      ..+++|||++|..|.+...         ++.    .....+...+.-+|   +.|+.|+|..|.|+++.++. ++++|++
T Consensus       117 ~~~ll~EYIeG~~l~d~~~---------i~e----~~~~ki~~~ikqlH---~~G~~HGD~hpgNFlv~~~~-i~iID~~  179 (229)
T PF06176_consen  117 SYVLLMEYIEGVELNDIED---------IDE----DLAEKIVEAIKQLH---KHGFYHGDPHPGNFLVSNNG-IRIIDTQ  179 (229)
T ss_pred             EEEEEEEEecCeecccchh---------cCH----HHHHHHHHHHHHHH---HcCCccCCCCcCcEEEECCc-EEEEECc
Confidence            3468999999977765431         111    23456677899999   99999999999999998655 8999997


Q ss_pred             CCc
Q 031436           92 YSE   94 (159)
Q Consensus        92 ~~~   94 (159)
                      ..+
T Consensus       180 ~k~  182 (229)
T PF06176_consen  180 GKR  182 (229)
T ss_pred             ccc
Confidence            543

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=97.92  E-value=9.8e-05  Score=50.42  Aligned_cols=31  Identities=19%  Similarity=0.419  Sum_probs=25.4

Q ss_pred             CCCeEEecCCCCCEEecC--CCceEEEecCCCc
Q 031436           64 SRPIVFRNVKPSNILFQE--QSVAKLFDFSYSE   94 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~--~~~~~l~d~~~~~   94 (159)
                      ...++|+|+.+.|++++.  ...+.++||+.+.
T Consensus       173 ~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~  205 (223)
T cd05154         173 RPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT  205 (223)
T ss_pred             CcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence            356899999999999988  4557899998654

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.74  E-value=0.00035  Score=47.03  Aligned_cols=86  Identities=24%  Similarity=0.291  Sum_probs=62.1

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      +++|.|-+    +.+.|+...+++......  .......++..+..++.+++..+.+++......+.-.|++++|+.++.
T Consensus        24 k~lG~CG~----~~v~E~~~~~~~~~~~~~--l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~   97 (188)
T PF12260_consen   24 KLLGSCGR----FYVVEYVGAGSLYGIYRP--LSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVND   97 (188)
T ss_pred             CeeeECCC----EEEEEeecCccccccccc--cccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeC
Confidence            57888844    678999987666432100  001123578889999999999999998442234455799999999999


Q ss_pred             CCceEEEecCCC
Q 031436           82 QSVAKLFDFSYS   93 (159)
Q Consensus        82 ~~~~~l~d~~~~   93 (159)
                      ++.+|++|....
T Consensus        98 ~~~lk~iDld~v  109 (188)
T PF12260_consen   98 DGRLKLIDLDDV  109 (188)
T ss_pred             CCcEEEEechhc
Confidence            889999999754

Proteins in this uncharacterised family are described as transmembrane proteins.

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=97.66  E-value=0.00024  Score=50.24  Aligned_cols=71  Identities=21%  Similarity=0.178  Sum_probs=51.5

Q ss_pred             CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEec
Q 031436           11 ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF   90 (159)
Q Consensus        11 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~   90 (159)
                      +.-.++||+.+|-.|...-          +..+....++..++..+...-   ..|++|+|+++-||+++.++.+.++||
T Consensus       180 nRHaVvMe~ieG~eL~~~r----------~~~en~~~il~~il~~~~~~~---~~GiVHGDlSefNIlV~~dg~~~vIDw  246 (304)
T COG0478         180 NRHAVVMEYIEGVELYRLR----------LDVENPDEILDKILEEVRKAY---RRGIVHGDLSEFNILVTEDGDIVVIDW  246 (304)
T ss_pred             ccceeeeehcccceeeccc----------CcccCHHHHHHHHHHHHHHHH---HcCccccCCchheEEEecCCCEEEEeC
Confidence            4557999999875554322          112223345666666666666   789999999999999999999999999


Q ss_pred             CCCc
Q 031436           91 SYSE   94 (159)
Q Consensus        91 ~~~~   94 (159)
                      -.+.
T Consensus       247 PQ~v  250 (304)
T COG0478         247 PQAV  250 (304)
T ss_pred             cccc
Confidence            6543

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=97.07  E-value=0.0034  Score=48.36  Aligned_cols=81  Identities=14%  Similarity=0.153  Sum_probs=62.5

Q ss_pred             cCCCceEEEEecCC-CChHHHhhCCCC----------CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCE
Q 031436            9 ETENPVLVFEYVEY-GTLADRIYHPRQ----------PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNI   77 (159)
Q Consensus         9 ~~~~~~lv~e~~~~-g~L~~~l~~~~~----------~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~ni   77 (159)
                      ++..+++|++|.++ ++|.+..-....          .+....++.....++.|+..||.++|   +.|+.=+-|.+.+|
T Consensus       348 ~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kI  424 (655)
T KOG3741|consen  348 GDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH---SSGLACKTLDLKKI  424 (655)
T ss_pred             CcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH---hcCceeecccHhHe
Confidence            35678999999884 788876543211          12245677888999999999999999   89998899999999


Q ss_pred             EecCCCceEEEecCC
Q 031436           78 LFQEQSVAKLFDFSY   92 (159)
Q Consensus        78 l~~~~~~~~l~d~~~   92 (159)
                      ++..+.++++..-|.
T Consensus       425 lv~G~~RIriS~C~i  439 (655)
T KOG3741|consen  425 LVTGKMRIRISGCGI  439 (655)
T ss_pred             EeeCcceEEEecccc
Confidence            998887777665443

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=96.97  E-value=0.00048  Score=54.06  Aligned_cols=129  Identities=21%  Similarity=0.074  Sum_probs=82.6

Q ss_pred             ecCCCceEEEEecCCC-ChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceE
Q 031436            8 LETENPVLVFEYVEYG-TLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAK   86 (159)
Q Consensus         8 ~~~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~   86 (159)
                      ......++.++++.++ +.......    +...+..-+.....+.-..++.++|   +.--+|+|    |++... ...+
T Consensus       304 ~~E~~~~i~~~i~s~~rs~~~~~~~----se~~~~~~~~~~~~r~et~~l~~l~---~~~~~~~d----~~l~s~-~~~~  371 (829)
T KOG0576|consen  304 DGEDYLWIPMRICSTGRSSALEMTV----SEIALEQYQFAYPLRKETRPLAELH---SSYKVHRD----NILGSE-EEVK  371 (829)
T ss_pred             CcccccchhhhhhcCCccccccCCh----hhHhhhhhhhhhhhhhhcccccccc---cccccCcc----cccccc-cccc
Confidence            3344567888888765 22111110    0011222223334455556788888   44446776    666544 4578


Q ss_pred             EEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           87 LFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        87 l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      ..+++....+....  ...+..++..|++||....+.+....|.||.++-. .++..|.+|..++
T Consensus       372 ~~~~~v~~~L~~~~--~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~-~~~ap~~pPr~~P  433 (829)
T KOG0576|consen  372 LLDFAVPPQLTRTM--KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSA-IQMAPGLPPRSSP  433 (829)
T ss_pred             cccccCCcccCccc--ccccCCCCCCCCCchhhcccccccCCCccCCCcch-hhcCCCCCCCCCC
Confidence            88888776665432  22345688999999999999999999999999876 7788887777653

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=96.93  E-value=0.0051  Score=43.15  Aligned_cols=76  Identities=21%  Similarity=0.237  Sum_probs=50.5

Q ss_pred             CceEEEEecCCC-ChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEec
Q 031436           12 NPVLVFEYVEYG-TLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF   90 (159)
Q Consensus        12 ~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~   90 (159)
                      +..|+|||+... .-...++.      -+....+...+..+++..+.-|-.  ..+++|+||+.=|||+. ++.+.++|+
T Consensus       140 ~nVLvMEfIg~~g~pAP~LkD------v~~e~~e~~~~~~~~v~~~~~l~~--~a~LVHgDLSEyNiL~~-~~~p~iID~  210 (268)
T COG1718         140 NNVLVMEFIGDDGLPAPRLKD------VPLELEEAEGLYEDVVEYMRRLYK--EAGLVHGDLSEYNILVH-DGEPYIIDV  210 (268)
T ss_pred             CCeEEEEeccCCCCCCCCccc------CCcCchhHHHHHHHHHHHHHHHHH--hcCcccccchhhheEEE-CCeEEEEEC
Confidence            347999999532 11112221      112222455566777777776662  48999999999999998 677999999


Q ss_pred             CCCccc
Q 031436           91 SYSESI   96 (159)
Q Consensus        91 ~~~~~~   96 (159)
                      +.+...
T Consensus       211 ~QaV~~  216 (268)
T COG1718         211 SQAVTI  216 (268)
T ss_pred             cccccc
Confidence            876544

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=96.75  E-value=0.027  Score=39.05  Aligned_cols=30  Identities=7%  Similarity=0.120  Sum_probs=25.2

Q ss_pred             CCCeEEecCCCCCEEecCCCceEEEecCCCc
Q 031436           64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSE   94 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~   94 (159)
                      ...++|+|+.|.|++++.+. +.++||+.+.
T Consensus       152 ~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       152 TSTCLHGDFQIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             CCceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence            34578999999999998877 8899998654

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=96.67  E-value=0.032  Score=38.90  Aligned_cols=31  Identities=10%  Similarity=0.129  Sum_probs=26.1

Q ss_pred             CCCeEEecCCCCCEEecCCCceEEEecCCCc
Q 031436           64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSE   94 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~   94 (159)
                      ...++|+|+.|.|++++......++|++.+.
T Consensus       162 ~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         162 DLVVTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             ceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence            3458999999999999987667899998654

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=96.65  E-value=0.004  Score=48.29  Aligned_cols=79  Identities=18%  Similarity=0.222  Sum_probs=53.5

Q ss_pred             CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHH-HHHhhhcCCCCeEEecCCCCCEEecCCCceEEE
Q 031436           10 TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYG-IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLF   88 (159)
Q Consensus        10 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~-l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~   88 (159)
                      .++..++|||+.|-.+.+...-..    .......   ++.-++.. +..+-   ..|++|.|.-|-|+++..++...+.
T Consensus       238 t~~~VLtmE~i~Gi~i~d~~~l~~----~g~d~k~---ia~~~~~~f~~q~~---~dgffHaDpHpGNi~v~~~g~i~~l  307 (517)
T COG0661         238 TTRRVLTMEWIDGIKISDIAALKS----AGIDRKE---LAELLVRAFLRQLL---RDGFFHADPHPGNILVRSDGRIVLL  307 (517)
T ss_pred             cCCcEEEEEeeCCEecccHHHHHh----cCCCHHH---HHHHHHHHHHHHHH---hcCccccCCCccceEEecCCcEEEE
Confidence            467789999999988887642211    1222222   22222221 33333   6789999999999999999999999


Q ss_pred             ecCCCcccCC
Q 031436           89 DFSYSESIPE   98 (159)
Q Consensus        89 d~~~~~~~~~   98 (159)
                      |||....+..
T Consensus       308 DfGi~g~l~~  317 (517)
T COG0661         308 DFGIVGRLDP  317 (517)
T ss_pred             cCcceecCCH
Confidence            9998766543

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=96.19  E-value=0.014  Score=43.46  Aligned_cols=71  Identities=21%  Similarity=0.162  Sum_probs=51.6

Q ss_pred             CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecC
Q 031436           12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFS   91 (159)
Q Consensus        12 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~   91 (159)
                      ..|++|++. |+++.. ++        --.+++.+.++++.+.-+.-+..  +..+-||++.-.||+++ ++.+.++||.
T Consensus       300 y~yl~~kdh-gt~is~-ik--------~~~~~e~lsff~s~~sil~~lek--kf~fehrnlt~~niLId-~GnvtLIDfk  366 (488)
T COG5072         300 YLYLHFKDH-GTPISI-IK--------ADRSEEELSFFWSCISILDILEK--KFPFEHRNLTLDNILID-EGNVTLIDFK  366 (488)
T ss_pred             EEEEEEecC-Cceeee-ee--------cccHHHHHHHHHHHHHHHhhhhh--cCCcccccccccceeee-cCceEEEEee
Confidence            456777776 566632 21        22456777788887766666653  55678999999999999 8999999998


Q ss_pred             CCcc
Q 031436           92 YSES   95 (159)
Q Consensus        92 ~~~~   95 (159)
                      +++.
T Consensus       367 lsRl  370 (488)
T COG5072         367 LSRL  370 (488)
T ss_pred             eeec
Confidence            8773

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=96.00  E-value=0.15  Score=34.76  Aligned_cols=80  Identities=28%  Similarity=0.292  Sum_probs=51.9

Q ss_pred             eEEEEEecCCCceEEEEecCC------CChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC
Q 031436            2 RLIGCCLETENPVLVFEYVEY------GTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS   75 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~------g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~   75 (159)
                      +++|..+.+--+-+|+|...+      .+|.++++..      .++. .....+.+.   .++|-   +.+++.+|++|.
T Consensus        81 r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~------~~~~-~~~~~L~~f---~~~l~---~~~Iv~~dl~~~  147 (199)
T PF10707_consen   81 RFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEG------GLTE-ELRQALDEF---KRYLL---DHHIVIRDLNPH  147 (199)
T ss_pred             cEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcC------CccH-HHHHHHHHH---HHHHH---HcCCeecCCCcc
Confidence            568888888888888887653      3465666432      2333 222333333   45566   788999999999


Q ss_pred             CEEecCCC----ceEEEe-cCCCc
Q 031436           76 NILFQEQS----VAKLFD-FSYSE   94 (159)
Q Consensus        76 nil~~~~~----~~~l~d-~~~~~   94 (159)
                      ||++....    .+.++| ||...
T Consensus       148 NIv~~~~~~~~~~lvlIDG~G~~~  171 (199)
T PF10707_consen  148 NIVVQRRDSGEFRLVLIDGLGEKE  171 (199)
T ss_pred             cEEEEecCCCceEEEEEeCCCCcc
Confidence            99996542    467777 66443

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=95.95  E-value=0.039  Score=43.04  Aligned_cols=79  Identities=19%  Similarity=0.193  Sum_probs=51.1

Q ss_pred             CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC----CCceE
Q 031436           11 ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE----QSVAK   86 (159)
Q Consensus        11 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~----~~~~~   86 (159)
                      ....|+||||.|..+.|.-.-.+    ..+....+..-+.+...  ..+-   ..|++|.|--|-||++.+    +..+.
T Consensus       275 t~RVLtME~~~G~~i~Dl~~i~~----~gi~~~~i~~~l~~~~~--~qIf---~~GffHaDPHPGNilv~~~~~~~~~iv  345 (538)
T KOG1235|consen  275 TKRVLTMEYVDGIKINDLDAIDK----RGISPHDILNKLVEAYL--EQIF---KTGFFHADPHPGNILVRPNPEGDEEIV  345 (538)
T ss_pred             cceEEEEEecCCccCCCHHHHHH----cCCCHHHHHHHHHHHHH--HHHH---hcCCccCCCCCCcEEEecCCCCCccEE
Confidence            46789999999988777532111    12333333333333322  2222   567999999999999984    34678


Q ss_pred             EEecCCCcccCC
Q 031436           87 LFDFSYSESIPE   98 (159)
Q Consensus        87 l~d~~~~~~~~~   98 (159)
                      +.|+|+...+..
T Consensus       346 llDhGl~~~is~  357 (538)
T KOG1235|consen  346 LLDHGLYAVISH  357 (538)
T ss_pred             EEcccccccccH
Confidence            889998766543

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=95.62  E-value=0.082  Score=38.69  Aligned_cols=31  Identities=13%  Similarity=0.380  Sum_probs=26.6

Q ss_pred             CCCeEEecCCCCCEEecCCCceEEEecCCCc
Q 031436           64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSE   94 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~   94 (159)
                      .-.++|+|+.+.|++++....+-++||+++.
T Consensus       197 ~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~  227 (321)
T COG3173         197 PPVLVHGDYRPGNLIIDPGRPTGVLDWELAT  227 (321)
T ss_pred             CceeeeCCcccCCEEEeCCCeeEEEeccccc
Confidence            3468999999999999988878899998754

>PLN02876 acyl-CoA dehydrogenase

Probab=95.31  E-value=0.19  Score=41.64  Aligned_cols=30  Identities=20%  Similarity=0.396  Sum_probs=22.9

Q ss_pred             CCeEEecCCCCCEEecCC-Cc-eEEEecCCCc
Q 031436           65 RPIVFRNVKPSNILFQEQ-SV-AKLFDFSYSE   94 (159)
Q Consensus        65 ~~~~h~~l~~~nil~~~~-~~-~~l~d~~~~~   94 (159)
                      ..++|+|+++.|++++.+ .. .-+.|+.++.
T Consensus       225 ~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~  256 (822)
T PLN02876        225 TGIVHGDFRIDNLVFHPTEDRVIGILDWELST  256 (822)
T ss_pred             cceEecCcccccEEEcCCCCeEEEEEeeeccc
Confidence            359999999999999753 33 4678887653

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=95.21  E-value=0.018  Score=42.41  Aligned_cols=68  Identities=15%  Similarity=0.150  Sum_probs=47.1

Q ss_pred             CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEec
Q 031436           11 ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF   90 (159)
Q Consensus        11 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~   90 (159)
                      +.-++|||++.+-+|.+.-....        .+   .+...+..-+.-|.   ..|+||+|..--||++..+..++++||
T Consensus       181 ~RH~Vvmelv~g~Pl~~v~~v~d--------~~---~ly~~lm~~Iv~la---~~GlIHgDFNEFNimv~dd~~i~vIDF  246 (465)
T KOG2268|consen  181 NRHCVVMELVDGYPLRQVRHVED--------PP---TLYDDLMGLIVRLA---NHGLIHGDFNEFNIMVKDDDKIVVIDF  246 (465)
T ss_pred             cceeeHHHhhcccceeeeeecCC--------hH---HHHHHHHHHHHHHH---HcCceecccchheeEEecCCCEEEeec
Confidence            45588999998877765442211        11   12223333344455   799999999999999998888999999


Q ss_pred             CC
Q 031436           91 SY   92 (159)
Q Consensus        91 ~~   92 (159)
                      -.
T Consensus       247 PQ  248 (465)
T KOG2268|consen  247 PQ  248 (465)
T ss_pred             hH
Confidence            53

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=94.32  E-value=0.001  Score=57.27  Aligned_cols=133  Identities=12%  Similarity=0.037  Sum_probs=88.9

Q ss_pred             CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHH-HHHHHHhhhcC--CCCeEEecCCCCCEEecCCCceEEE
Q 031436           12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEI-AYGIAYLHVAF--SRPIVFRNVKPSNILFQEQSVAKLF   88 (159)
Q Consensus        12 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i-~~~l~~lh~~~--~~~~~h~~l~~~nil~~~~~~~~l~   88 (159)
                      ..+..++++.+|.+.+.+.+..... ... -+..+....++ .....-+|+..  +..-+|+++++.|.++.-+..+++.
T Consensus      1305 ee~~r~~~~~~g~~f~iIikg~ee~-~~l-d~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~g 1382 (2724)
T KOG1826|consen 1305 EEYIRSLYVEFGKLFSIIIKGLEES-PDL-DRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLG 1382 (2724)
T ss_pred             HHHHHHHHHHHhHHHHHHHhccccC-Ccc-hhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCCccccc
Confidence            3477888999999999877643211 111 12233344444 44444444321  2235799999999999988899999


Q ss_pred             ecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceeccccc
Q 031436           89 DFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWY  148 (159)
Q Consensus        89 d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~  148 (159)
                      ++|+.+.. .+.....+...+++.|+.++.....+++.++|+|+.++.+ |....|..+|
T Consensus      1383 k~gLdKIk-np~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~l-y~rs~~n~~f 1440 (2724)
T KOG1826|consen 1383 KGGLDKIK-NPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSL-YLRSDGNAYF 1440 (2724)
T ss_pred             cccccccc-CchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHH-HHHhcccHHH
Confidence            99987722 2222223445667778888887777888889999988888 8777776665

>PRK05231 homoserine kinase; Provisional

Probab=93.36  E-value=0.076  Score=38.60  Aligned_cols=31  Identities=19%  Similarity=0.502  Sum_probs=25.8

Q ss_pred             CCCeEEecCCCCCEEecCCCceEEEecCCCc
Q 031436           64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSE   94 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~   94 (159)
                      ..+++|+|+.+.|++++.+....++||+.+.
T Consensus       186 p~~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        186 PRGVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             CcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence            4579999999999999866556899998654

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=93.31  E-value=0.11  Score=36.04  Aligned_cols=31  Identities=19%  Similarity=0.382  Sum_probs=25.5

Q ss_pred             CCCeEEecCCCCCEEecCCCceEEEecCCCc
Q 031436           64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSE   94 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~   94 (159)
                      ..+++|+|+.+.|++++......++||+.+.
T Consensus       163 ~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~  193 (235)
T cd05155         163 PPVWFHGDLAPGNLLVQDGRLSAVIDFGCLG  193 (235)
T ss_pred             CceEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence            4568999999999999876656799998653

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=93.11  E-value=0.41  Score=34.48  Aligned_cols=31  Identities=23%  Similarity=0.405  Sum_probs=26.4

Q ss_pred             CCCeEEecCCCCCEEecCC----CceEEEecCCCc
Q 031436           64 SRPIVFRNVKPSNILFQEQ----SVAKLFDFSYSE   94 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~----~~~~l~d~~~~~   94 (159)
                      ..+++|+|+.+.||+++.+    ..+.++||..+.
T Consensus       178 ~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~  212 (302)
T cd05156         178 PVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS  212 (302)
T ss_pred             CceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence            4578999999999999874    678999998764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=92.83  E-value=0.13  Score=35.90  Aligned_cols=37  Identities=19%  Similarity=0.280  Sum_probs=30.7

Q ss_pred             HHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecC
Q 031436           54 YGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFS   91 (159)
Q Consensus        54 ~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~   91 (159)
                      ..+...|+. ..+.+|+|..|+||+-++.+.+|+.|=+
T Consensus       152 ~~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~  188 (308)
T PF07387_consen  152 KDLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPV  188 (308)
T ss_pred             HHHHHhhcc-CCCeecCCCChhheeecCCCCEEecChh
Confidence            456677854 6779999999999999999999988744

The function of this family is unknown.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=92.69  E-value=0.13  Score=35.60  Aligned_cols=31  Identities=19%  Similarity=0.494  Sum_probs=26.0

Q ss_pred             CCCeEEecCCCCCEEecC-CCceEEEecCCCc
Q 031436           64 SRPIVFRNVKPSNILFQE-QSVAKLFDFSYSE   94 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~-~~~~~l~d~~~~~   94 (159)
                      ..+++|+|+.+.||+++. +..+.++||..+.
T Consensus       169 ~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~  200 (235)
T cd05157         169 PIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAG  200 (235)
T ss_pred             CEEEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence            346899999999999997 4679999997654

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=92.25  E-value=0.13  Score=43.73  Aligned_cols=119  Identities=15%  Similarity=0.135  Sum_probs=73.1

Q ss_pred             EEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC---CEEecCCCceEEE--ec
Q 031436           16 VFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS---NILFQEQSVAKLF--DF   90 (159)
Q Consensus        16 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~---nil~~~~~~~~l~--d~   90 (159)
                      ..|+|+.-++.+.+..-     ...+......+..+...|+.++|   +..+.|.-+...   +-..+........  |+
T Consensus       264 ~~~~~s~~~~~~~~q~v-----~~i~~~~~r~~~~~~~~GL~~~h---~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~  335 (1351)
T KOG1035|consen  264 LQEICSKVELRSLLQSV-----GSIPLETLRILHQKLLEGLAYLH---SLSLEHVVLSASSSKESTVDGEGVVAISLSDF  335 (1351)
T ss_pred             HHhhcCccchHHHHhhc-----cccCHHHHHHHHHHHhhhHHHHH---HhccceeEEecccccccccCccceeecchhhh
Confidence            34666666666666433     45677778889999999999999   665555555444   2233333344444  77


Q ss_pred             CCCcccCCCcceeeeeecccccccCccccccCCCC--CCcceEeccccccCcceecc
Q 031436           91 SYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN--EKCDVYSFDGSRDSGHLTGR  145 (159)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~--~~~DvwS~g~~~~~~~~~g~  145 (159)
                      +.+..........  ....+..+-++|....+...  ...|+|.+|... ..+..+.
T Consensus       336 ~ss~~l~d~~~~~--~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~-~~~~~~~  389 (1351)
T KOG1035|consen  336 DSSKPLPDNEKSF--SDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLL-LQLSQGE  389 (1351)
T ss_pred             cccccCCCcccch--hhcCccccccccccccccchhhhhhHHHHHHHHH-hhhhhcC
Confidence            7666554432211  12234456677777665544  447999999887 6666654

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=91.83  E-value=0.17  Score=36.70  Aligned_cols=31  Identities=29%  Similarity=0.609  Sum_probs=26.5

Q ss_pred             CCCeEEecCCCCCEEecCCCceEEEecCCCc
Q 031436           64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSE   94 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~   94 (159)
                      ..+++|+|+.+.|++++.+....++||+.+.
T Consensus       186 ~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       186 PRGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             CCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence            4689999999999999887766899998653

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PHA03111 Ser/Thr kinase; Provisional

Probab=91.65  E-value=0.73  Score=34.28  Aligned_cols=40  Identities=20%  Similarity=0.239  Sum_probs=25.6

Q ss_pred             hhHHHHHHHHHHHH-HHhhhcCCCCeEEecCCCCCEEecCC
Q 031436           43 SLRLKIAMEIAYGI-AYLHVAFSRPIVFRNVKPSNILFQEQ   82 (159)
Q Consensus        43 ~~~~~~~~~i~~~l-~~lh~~~~~~~~h~~l~~~nil~~~~   82 (159)
                      +-++.+..|++.-. +.-...+-..++|-||||+|||+.+.
T Consensus       279 ~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds  319 (444)
T PHA03111        279 EYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDS  319 (444)
T ss_pred             HHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecC
Confidence            34456677776543 22232223458999999999999654

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=91.39  E-value=0.17  Score=36.29  Aligned_cols=31  Identities=19%  Similarity=0.495  Sum_probs=26.0

Q ss_pred             CCCeEEecCCCCCEEecCCCceEEEecCCCc
Q 031436           64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSE   94 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~   94 (159)
                      ..+++|+|+.|.|++++.+....++||..+.
T Consensus       174 ~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~  204 (296)
T cd05153         174 PRGVIHADLFRDNVLFDGDELSGVIDFYFAC  204 (296)
T ss_pred             CCcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence            3579999999999999987667899997644

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=91.38  E-value=0.15  Score=34.77  Aligned_cols=31  Identities=19%  Similarity=0.417  Sum_probs=20.7

Q ss_pred             CCCeEEecCCCCCEEec-CCCceEEEecCCCc
Q 031436           64 SRPIVFRNVKPSNILFQ-EQSVAKLFDFSYSE   94 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~-~~~~~~l~d~~~~~   94 (159)
                      ...++|+|+.+.|++++ .+..+.++||+.+.
T Consensus       165 ~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~  196 (239)
T PF01636_consen  165 PPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG  196 (239)
T ss_dssp             CEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred             CcEEEEeccccccceeeeccceeEEEecccce
Confidence            56799999999999999 44555799997653

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=90.89  E-value=0.87  Score=32.86  Aligned_cols=29  Identities=24%  Similarity=0.449  Sum_probs=24.3

Q ss_pred             CCCeEEecCCCCCEEecCCCceEEEecCCC
Q 031436           64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYS   93 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~~~~~l~d~~~~   93 (159)
                      ..+++|+|+.+.|++++. ..+.++||+.+
T Consensus       186 ~~~liHgD~~~~Nil~~~-~~i~lIDfd~~  214 (313)
T TIGR02906       186 IRGFCHQDYAYHNILLKD-NEVYVIDFDYC  214 (313)
T ss_pred             cCceEcCCCCcccEEEeC-CcEEEEECccc
Confidence            357899999999999987 55789999854

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>TIGR02721 ycfN_thiK thiamine kinase

Probab=90.80  E-value=0.28  Score=34.48  Aligned_cols=29  Identities=24%  Similarity=0.413  Sum_probs=24.5

Q ss_pred             CCeEEecCCCCCEEecCCCceEEEecCCCc
Q 031436           65 RPIVFRNVKPSNILFQEQSVAKLFDFSYSE   94 (159)
Q Consensus        65 ~~~~h~~l~~~nil~~~~~~~~l~d~~~~~   94 (159)
                      ..++|+|+.+.|++++.+. +.++||..+.
T Consensus       146 ~~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~  174 (256)
T TIGR02721       146 LAPLHMDVHAYNLVVTPQG-LKLIDWEYAS  174 (256)
T ss_pred             CeeecCCCCcCcEEEeCCC-CEEEeccccC
Confidence            4689999999999998766 7899997654

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=89.35  E-value=0.3  Score=33.26  Aligned_cols=30  Identities=30%  Similarity=0.583  Sum_probs=20.5

Q ss_pred             CCeEEecCCCCCEEe-cCCCceEEEecCCCc
Q 031436           65 RPIVFRNVKPSNILF-QEQSVAKLFDFSYSE   94 (159)
Q Consensus        65 ~~~~h~~l~~~nil~-~~~~~~~l~d~~~~~   94 (159)
                      ..+.|.|+.+.||++ ..+..++++||..+.
T Consensus       143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~  173 (211)
T PF01633_consen  143 LVFCHNDLNPGNILINNKDGEVKLIDFEYAG  173 (211)
T ss_dssp             EEEE-S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred             ceEeeccCccccEEeccCCCeEEEecHHHHh
Confidence            467899999999999 777889999997654

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=88.70  E-value=1.5  Score=31.41  Aligned_cols=30  Identities=20%  Similarity=0.417  Sum_probs=26.2

Q ss_pred             CCeEEecCCCCCEEecCCCceEEEecCCCc
Q 031436           65 RPIVFRNVKPSNILFQEQSVAKLFDFSYSE   94 (159)
Q Consensus        65 ~~~~h~~l~~~nil~~~~~~~~l~d~~~~~   94 (159)
                      ...+|.|+.|.|++.+.++.+.++||..+.
T Consensus       153 ~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg  182 (269)
T COG0510         153 LVPCHNDLNPGNLLLTDKGGLFLIDWEYAG  182 (269)
T ss_pred             eeeecCCCCccceEEcCCCcEEEEecccCC
Confidence            458999999999999998899999997543

>PRK10271 thiK thiamine kinase; Provisional

Probab=88.55  E-value=0.57  Score=31.64  Aligned_cols=29  Identities=17%  Similarity=0.399  Sum_probs=24.4

Q ss_pred             CCeEEecCCCCCEEecCCCceEEEecCCCc
Q 031436           65 RPIVFRNVKPSNILFQEQSVAKLFDFSYSE   94 (159)
Q Consensus        65 ~~~~h~~l~~~nil~~~~~~~~l~d~~~~~   94 (159)
                      ...+|+|+-|.|+++..++ ++++|++.+.
T Consensus        77 ~~p~H~D~~~~N~~~~~~~-~~lIDwe~a~  105 (188)
T PRK10271         77 LAPLHMDVHAGNLVHSASG-LRLIDWEYAG  105 (188)
T ss_pred             eeeecCCCCCccEEEECCC-EEEEeCCccc
Confidence            3568999999999997766 8899998754

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=88.05  E-value=0.52  Score=33.78  Aligned_cols=31  Identities=23%  Similarity=0.475  Sum_probs=24.4

Q ss_pred             CCCeEEecCCCCCEEecCCCc-eEEEecCCCc
Q 031436           64 SRPIVFRNVKPSNILFQEQSV-AKLFDFSYSE   94 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~~~-~~l~d~~~~~   94 (159)
                      ...++|+|+.+.|++++.+.. ..++|++.+.
T Consensus       184 ~~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~  215 (276)
T cd05152         184 HTVLVHGDLHPGHILIDEDARVTGLIDWTEAK  215 (276)
T ss_pred             CCeeEeCCCCCCcEEEeCCCCEEEEECcHhcc
Confidence            345899999999999987444 5689998654

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=87.88  E-value=0.66  Score=31.36  Aligned_cols=32  Identities=22%  Similarity=0.305  Sum_probs=25.2

Q ss_pred             CCCeEEecCCCCCEEecCCC-----ceEEEecCCCcc
Q 031436           64 SRPIVFRNVKPSNILFQEQS-----VAKLFDFSYSES   95 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~~-----~~~l~d~~~~~~   95 (159)
                      ...++|+|+.+.|+++..+.     .+.++||..+..
T Consensus       119 ~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~  155 (196)
T smart00587      119 FNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHY  155 (196)
T ss_pred             ceEEeeCCCCccceeeccCCCCCccceEEEecccCCc
Confidence            45789999999999997543     578999986543

subfamily of choline kinases

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=87.37  E-value=2.6  Score=31.18  Aligned_cols=28  Identities=25%  Similarity=0.624  Sum_probs=24.3

Q ss_pred             eEEecCCCCCEEecCCCc-eEEEecCCCc
Q 031436           67 IVFRNVKPSNILFQEQSV-AKLFDFSYSE   94 (159)
Q Consensus        67 ~~h~~l~~~nil~~~~~~-~~l~d~~~~~   94 (159)
                      ++|+|+.+.|++++.+.. ..++||+-+.
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEccccc
Confidence            899999999999998874 7899998643

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=87.26  E-value=0.43  Score=34.63  Aligned_cols=31  Identities=16%  Similarity=0.300  Sum_probs=26.4

Q ss_pred             CCCeEEecCCCCCEEecCCCceEEEecCCCc
Q 031436           64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSE   94 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~   94 (159)
                      ..+++|+|+.+.|++++.+..+.++||..+.
T Consensus       195 ~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~  225 (309)
T TIGR02904       195 RTVLVHGKLSLSHFLYDETRGGYFINFEKAS  225 (309)
T ss_pred             ceeeeCCCCcHHhEEEcCCCCEEEEEhhhcc
Confidence            4579999999999999888788899997544

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=87.09  E-value=1.6  Score=32.64  Aligned_cols=35  Identities=26%  Similarity=0.422  Sum_probs=22.1

Q ss_pred             HHHHHHHHHHHHHHh---hhcCCCCeEEecCCCCCEEecC
Q 031436           45 RLKIAMEIAYGIAYL---HVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus        45 ~~~~~~~i~~~l~~l---h~~~~~~~~h~~l~~~nil~~~   81 (159)
                      ++.+..|++.  -|+   ...+-...+|-||||+|||+.+
T Consensus       277 vkfifLQiaL--LyikIYelp~c~nF~H~DLKPdNILiFd  314 (434)
T PF05445_consen  277 VKFIFLQIAL--LYIKIYELPCCTNFLHVDLKPDNILIFD  314 (434)
T ss_pred             HHHHHHHHHH--HHeeeecCCCcceeeecccCcCcEEEec
Confidence            4455566643  331   2211345899999999999954

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>PLN02236 choline kinase

Probab=87.03  E-value=1.7  Score=32.19  Aligned_cols=31  Identities=16%  Similarity=0.432  Sum_probs=25.5

Q ss_pred             CCCeEEecCCCCCEEecCC-CceEEEecCCCc
Q 031436           64 SRPIVFRNVKPSNILFQEQ-SVAKLFDFSYSE   94 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~-~~~~l~d~~~~~   94 (159)
                      ...++|+|+.+.||+++.. ..+.++||..+.
T Consensus       199 ~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~  230 (344)
T PLN02236        199 EIGFCHNDLQYGNIMIDEETRAITIIDYEYAS  230 (344)
T ss_pred             CceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence            3468999999999999764 579999997654

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=85.82  E-value=3  Score=31.78  Aligned_cols=71  Identities=17%  Similarity=0.190  Sum_probs=45.9

Q ss_pred             eEEEEecCCCChH--HHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecC
Q 031436           14 VLVFEYVEYGTLA--DRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFS   91 (159)
Q Consensus        14 ~lv~e~~~~g~L~--~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~   91 (159)
                      .|||+|+- .+=.  ..|+.      ..++......+-.|++.-+.-|-+  .++++|.||+-=|+|+.. +.+.++|.+
T Consensus       240 VLVM~FlG-rdgw~aPkLKd------~~ls~~ka~~~Y~~~v~~MR~lY~--~c~LVHADLSEfN~Lyhd-G~lyiIDVS  309 (520)
T KOG2270|consen  240 VLVMEFLG-RDGWAAPKLKD------ASLSTSKARELYQQCVRIMRRLYQ--KCRLVHADLSEFNLLYHD-GKLYIIDVS  309 (520)
T ss_pred             eEeeeecc-CCCCcCccccc------ccCChHHHHHHHHHHHHHHHHHHH--HhceeccchhhhhheEEC-CEEEEEEcc
Confidence            68999994 3322  22322      224444455555566665665543  688999999999999855 457788887


Q ss_pred             CCc
Q 031436           92 YSE   94 (159)
Q Consensus        92 ~~~   94 (159)
                      .+.
T Consensus       310 QSV  312 (520)
T KOG2270|consen  310 QSV  312 (520)
T ss_pred             ccc
Confidence            654

>PRK06148 hypothetical protein; Provisional

Probab=81.76  E-value=3.4  Score=35.40  Aligned_cols=31  Identities=19%  Similarity=0.348  Sum_probs=24.9

Q ss_pred             CCCeEEecCCCCCEEecCCC--c-eEEEecCCCc
Q 031436           64 SRPIVFRNVKPSNILFQEQS--V-AKLFDFSYSE   94 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~~--~-~~l~d~~~~~   94 (159)
                      ..+++|.|+.+.||+++.+.  . .-++|||-+.
T Consensus       202 p~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~  235 (1013)
T PRK06148        202 PAQVIHNDANDYNILVDADDGERISGLIDFGDAV  235 (1013)
T ss_pred             CcceECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence            46799999999999998764  3 4589998654

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=81.55  E-value=1.8  Score=31.92  Aligned_cols=29  Identities=17%  Similarity=0.441  Sum_probs=24.4

Q ss_pred             CeEEecCCCCCEEecC-CCceEEEecCCCc
Q 031436           66 PIVFRNVKPSNILFQE-QSVAKLFDFSYSE   94 (159)
Q Consensus        66 ~~~h~~l~~~nil~~~-~~~~~l~d~~~~~   94 (159)
                      .+.|.|+.+.||++++ +..++++||..+.
T Consensus       183 v~CHnDl~~~NiL~~~~~~~l~lID~EYag  212 (330)
T PLN02421        183 VFAHNDLLSGNLMLNEDEGKLYFIDFEYGS  212 (330)
T ss_pred             EEEECCCCcccEEEeCCCCcEEEEcccccC
Confidence            4789999999999974 4679999998654

>PRK06149 hypothetical protein; Provisional

Probab=80.42  E-value=3.2  Score=35.37  Aligned_cols=31  Identities=13%  Similarity=0.156  Sum_probs=24.4

Q ss_pred             CCCeEEecCCCCCEEecCCC--c---eEEEecCCCc
Q 031436           64 SRPIVFRNVKPSNILFQEQS--V---AKLFDFSYSE   94 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~~--~---~~l~d~~~~~   94 (159)
                      ..+++|.|+.+.|++++.+.  .   ..++|||-+.
T Consensus       207 ~~g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~  242 (972)
T PRK06149        207 PLQAVHLDITDDNVVGSRDADGRWQPDGVIDFGDLV  242 (972)
T ss_pred             cccccCCCCCcccEEEcCCCCCCcceeEEEEcccch
Confidence            57799999999999998642  2   4789998543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	159
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		5e-19
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		4e-18
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		1e-15
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		7e-15
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		2e-11
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		3e-11
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		1e-10
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		2e-10
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		4e-10
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		7e-10
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		7e-10
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		7e-10
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		1e-09
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		2e-09
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		5e-09
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		5e-09
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		6e-09
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		7e-09
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		2e-08
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		2e-08
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		3e-08
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		3e-08
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		3e-08
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		3e-08
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		3e-08
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		3e-08
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		3e-08
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		3e-08
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		4e-08
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		4e-08
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		4e-08
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		4e-08
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		4e-08
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		4e-08
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		5e-08
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		5e-08
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		5e-08
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		6e-08
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		6e-08
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		6e-08
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		6e-08
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		6e-08
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		7e-08
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		7e-08
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		7e-08
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		7e-08
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		7e-08
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		7e-08
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		7e-08
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		7e-08
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		7e-08
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		7e-08
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		7e-08
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		7e-08
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		7e-08
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		7e-08
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		8e-08
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		8e-08
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		8e-08
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		8e-08
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		8e-08
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		8e-08
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		8e-08
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		8e-08
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		9e-08
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		9e-08
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		9e-08
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		1e-07
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		1e-07
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		1e-07
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		1e-07
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		1e-07
2pl0_A	289	Lck Bound To Imatinib Length = 289		1e-07
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		1e-07
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		1e-07
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		1e-07
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		1e-07
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		2e-07
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		2e-07
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		2e-07
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		2e-07
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		3e-07
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		3e-07
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		3e-07
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		3e-07
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		6e-07
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		6e-07
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		6e-07
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		6e-07
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		7e-07
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		7e-07
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		8e-07
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		8e-07
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		9e-07
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		1e-06
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		1e-06
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		1e-06
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		1e-06
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		1e-06
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		1e-06
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		1e-06
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		1e-06
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		1e-06
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		1e-06
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		1e-06
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		1e-06
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		1e-06
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		2e-06
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		2e-06
4fl2_A	636	Structural And Biophysical Characterization Of The		2e-06
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		2e-06
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		2e-06
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		2e-06
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		2e-06
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		2e-06
4fl3_A	635	Structural And Biophysical Characterization Of The		2e-06
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		2e-06
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		2e-06
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		2e-06
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		2e-06
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		2e-06
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		2e-06
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		2e-06
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-06
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-06
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		2e-06
3a7f_A	303	Human Mst3 Kinase Length = 303		2e-06
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		2e-06
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		3e-06
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		3e-06
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		3e-06
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		4e-06
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		4e-06
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		4e-06
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		4e-06
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		4e-06
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		4e-06
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		4e-06
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		5e-06
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		5e-06
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		5e-06
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		6e-06
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		6e-06
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		6e-06
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		6e-06
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		6e-06
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		6e-06
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		6e-06
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		6e-06
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		6e-06
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		6e-06
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		6e-06
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		7e-06
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		7e-06
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		7e-06
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		7e-06
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		7e-06
3g51_A	325	Structural Diversity Of The Active Conformation Of		7e-06
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		8e-06
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-05
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		1e-05
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		1e-05
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		1e-05
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		1e-05
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-05
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-05
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		1e-05
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		2e-05
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-05
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-05
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		2e-05
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		2e-05
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-05
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		2e-05
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		2e-05
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		2e-05
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		2e-05
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		2e-05
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		2e-05
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		2e-05
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		2e-05
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		2e-05
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-05
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		3e-05
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		3e-05
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		3e-05
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		3e-05
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		3e-05
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		3e-05
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		3e-05
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		3e-05
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		3e-05
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		4e-05
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		4e-05
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		4e-05
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		4e-05
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		4e-05
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		4e-05
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		4e-05
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		4e-05
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		4e-05
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		4e-05
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		4e-05
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		4e-05
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		4e-05
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		4e-05
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		4e-05
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		4e-05
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		4e-05
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-05
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		5e-05
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		5e-05
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		5e-05
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		5e-05
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		5e-05
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		5e-05
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-05
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		5e-05
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		5e-05
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		5e-05
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		5e-05
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		5e-05
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		5e-05
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		5e-05
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		5e-05
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		5e-05
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		5e-05
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		5e-05
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		5e-05
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		5e-05
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		5e-05
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		5e-05
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		5e-05
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		5e-05
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		5e-05
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		5e-05
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		5e-05
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		5e-05
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		5e-05
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		5e-05
4ae6_A	343	Structure And Function Of The Human Sperm-specific		5e-05
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		5e-05
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		5e-05
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		5e-05
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		5e-05
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		5e-05
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		5e-05
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		5e-05
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		5e-05
4ae9_A	343	Structure And Function Of The Human Sperm-specific		5e-05
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		5e-05
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		5e-05
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		5e-05
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		6e-05
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		6e-05
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		6e-05
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		6e-05
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		6e-05
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		7e-05
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		7e-05
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		7e-05
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		7e-05
3a4o_X	286	Lyn Kinase Domain Length = 286		8e-05
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		8e-05
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		8e-05
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		8e-05
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		8e-05
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		8e-05
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		9e-05
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		9e-05
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		1e-04
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		1e-04
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		1e-04
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		1e-04
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		1e-04
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-04
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		1e-04
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		1e-04
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		1e-04
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		1e-04
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		1e-04
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		1e-04
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		1e-04
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		1e-04
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		1e-04
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		1e-04
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		1e-04
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		1e-04
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		1e-04
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		1e-04
1fvr_A	327	Tie2 Kinase Domain Length = 327		1e-04
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		1e-04
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		1e-04
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		1e-04
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		1e-04
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		1e-04
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		1e-04
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		1e-04
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		1e-04
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		1e-04
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-04
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		1e-04
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-04
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		1e-04
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-04
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		1e-04
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		1e-04
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		1e-04
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-04
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		1e-04
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		1e-04
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		1e-04
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		1e-04
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-04
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		1e-04
4h58_A	275	Braf In Complex With Compound 3 Length = 275		1e-04
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		1e-04
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		1e-04
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		2e-04
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		2e-04
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		2e-04
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		2e-04
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		2e-04
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		2e-04
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		2e-04
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		2e-04
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		2e-04
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		2e-04
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		2e-04
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		2e-04
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		2e-04
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		2e-04
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		2e-04
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		2e-04
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		2e-04
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		2e-04
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		2e-04
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		2e-04
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-04
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		2e-04
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		2e-04
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		2e-04
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		2e-04
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		2e-04
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		3e-04
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		3e-04
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		3e-04
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		3e-04
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		3e-04
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		3e-04
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		3e-04
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		3e-04
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		3e-04
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		3e-04
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		3e-04
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		3e-04
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		3e-04
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		3e-04
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		3e-04
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		3e-04
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		3e-04
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		3e-04
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		3e-04
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		3e-04
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		3e-04
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		3e-04
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		3e-04
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		3e-04
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		3e-04
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		3e-04
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		4e-04
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		4e-04
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		4e-04
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		4e-04
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		4e-04
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		4e-04
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		4e-04
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		4e-04
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		4e-04
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		4e-04
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		4e-04
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		4e-04
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		4e-04
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		4e-04
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		4e-04
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		4e-04
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		4e-04
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		4e-04
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		4e-04
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		4e-04
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		4e-04
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		4e-04
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		4e-04
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		4e-04
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		4e-04
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		4e-04
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		4e-04
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		4e-04
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		5e-04
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		5e-04
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		5e-04
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		5e-04
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		5e-04
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		5e-04
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		5e-04
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		5e-04
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		5e-04
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		5e-04
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		5e-04
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		5e-04
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		5e-04
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		5e-04
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		5e-04
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		5e-04
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		6e-04
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-04
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		6e-04
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		6e-04
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		6e-04
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		6e-04
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		6e-04
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		6e-04
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		6e-04
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		6e-04
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		6e-04
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-04
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-04
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		6e-04
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		6e-04
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		7e-04
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		7e-04
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		8e-04
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		8e-04
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		8e-04
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		8e-04
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		8e-04
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		8e-04
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		9e-04
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		9e-04

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 89.7 bits (221), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 53/132 (40%), Positives = 72/132 (54%), Gaps = 5/132 (3%)
Query: 3   LIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVA 62
           LIG C E    +L+++Y+E G L   +Y    P    ++   RL+I +  A G+ YLH  
Sbjct: 100 LIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTM-SMSWEQRLEICIGAARGLHYLH-- 156
Query: 63  FSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPE-GETRIRGRVMGTFGYLPPEYIAT 121
            +R I+ R+VK  NIL  E  V K+ DF  S+   E G+T +   V GT GY+ PEY   
Sbjct: 157 -TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIK 215
Query: 122 GDCNEKCDVYSF 133
           G   EK DVYSF
Sbjct: 216 GRLTEKSDVYSF 227

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 87.0 bits (214), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 52/132 (39%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 3   LIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVA 62
           LIG C E    +L+++Y+E G L   +Y    P    ++   RL+I +  A G+ YLH  
Sbjct: 100 LIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTM-SMSWEQRLEICIGAARGLHYLH-- 156
Query: 63  FSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPE-GETRIRGRVMGTFGYLPPEYIAT 121
            +R I+ R+VK  NIL  E  V K+ DF  S+   E  +T +   V GT GY+ PEY   
Sbjct: 157 -TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIK 215
Query: 122 GDCNEKCDVYSF 133
           G   EK DVYSF
Sbjct: 216 GRLTEKSDVYSF 227

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 1/133 (0%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G C+     +LV+ Y+  G++A      R  +  P+    R +IA+  A G+AYLH
Sbjct: 98  LRLRGFCMTPTERLLVYPYMANGSVAS-CLRERPESQPPLDWPKRQRIALGSARGLAYLH 156
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
                 I+ R+VK +NIL  E+  A + DF  ++ +   +  +   V GT G++ PEY++
Sbjct: 157 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLS 216
Query: 121 TGDCNEKCDVYSF 133
           TG  +EK DV+ +
Sbjct: 217 TGKSSEKTDVFGY 229

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 76.3 bits (186), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G C+     +LV+ Y+  G++A      R  +  P+    R +IA+  A G+AYLH
Sbjct: 90  LRLRGFCMTPTERLLVYPYMANGSVAS-CLRERPESQPPLDWPKRQRIALGSARGLAYLH 148
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
                 I+ R+VK +NIL  E+  A + DF  ++ +   +  +   V G  G++ PEY++
Sbjct: 149 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLS 208
Query: 121 TGDCNEKCDVYSF 133
           TG  +EK DV+ +
Sbjct: 209 TGKSSEKTDVFGY 221

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 7/134 (5%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           + L+G   + ++  LV+ Y+  G+L DR+         P++  +R KIA   A GI +LH
Sbjct: 93  VELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCKIAQGAANGINFLH 150
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPE-GETRIRGRVMGTFGYLPPEYI 119
                  + R++K +NIL  E   AK+ DF  + +  +  +T +  R++GT  Y+ PE +
Sbjct: 151 ---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL 207
Query: 120 ATGDCNEKCDVYSF 133
             G+   K D+YSF
Sbjct: 208 -RGEITPKSDIYSF 220

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 7/134 (5%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           + L+G   + ++  LV+ Y+  G+L DR+         P++  +R KIA   A GI +LH
Sbjct: 93  VELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCKIAQGAANGINFLH 150
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPE-GETRIRGRVMGTFGYLPPEYI 119
                  + R++K +NIL  E   AK+ DF  + +  +  +T +  R++GT  Y+ PE +
Sbjct: 151 ---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL 207
Query: 120 ATGDCNEKCDVYSF 133
             G+   K D+YSF
Sbjct: 208 -RGEITPKSDIYSF 220

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 7/134 (5%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           + L+G   + ++  LV+ Y+  G+L DR+         P++  +R KIA   A GI +LH
Sbjct: 87  VELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCKIAQGAANGINFLH 144
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPE-GETRIRGRVMGTFGYLPPEYI 119
                  + R++K +NIL  E   AK+ DF  + +  +  +  +  R++GT  Y+ PE +
Sbjct: 145 ---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL 201
Query: 120 ATGDCNEKCDVYSF 133
             G+   K D+YSF
Sbjct: 202 -RGEITPKSDIYSF 214

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LV EY+E  TL++ I      +  P++    +    +I  GI + H      IV R++KP
Sbjct: 88  LVMEYIEGPTLSEYI-----ESHGPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKP 139
Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC-DVYSF 133
            NIL       K+FDF  ++++ E        V+GT  Y  PE  A G+  ++C D+YS 
Sbjct: 140 QNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQ-AKGEATDECTDIYSI 198

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           +  E+ + GTL   I   R    + V   L L++  +I  G+ Y+H   S+ ++ R++KP
Sbjct: 111 IQMEFCDKGTLEQWIEKRRGEKLDKV---LALELFEQITKGVDYIH---SKKLIHRDLKP 164
Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
           SNI   +    K+ DF    S+     R R +  GT  Y+ PE I++ D  ++ D+Y+ 
Sbjct: 165 SNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSK--GTLRYMSPEQISSQDYGKEVDLYAL 221

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
Query: 1   MRLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
           ++L G CL   NPV LV EY E G+L + + H  +P     T +  +   ++ + G+AYL
Sbjct: 65  VKLYGACL---NPVCLVMEYAEGGSLYN-VLHGAEP-LPYYTAAHAMSWCLQCSQGVAYL 119
Query: 60  HVAFSRPIVFRNVKPSNILF-QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEY 118
           H    + ++ R++KP N+L     +V K+ DF  +  I    T  +    G+  ++ PE 
Sbjct: 120 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK----GSAAWMAPEV 175
Query: 119 IATGDCNEKCDVYSF 133
               + +EKCDV+S+
Sbjct: 176 FEGSNYSEKCDVFSW 190

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
Query: 1   MRLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
           ++L G CL   NPV LV EY E G+L + + H  +P     T +  +   ++ + G+AYL
Sbjct: 64  VKLYGACL---NPVCLVMEYAEGGSLYN-VLHGAEP-LPYYTAAHAMSWCLQCSQGVAYL 118
Query: 60  HVAFSRPIVFRNVKPSNILF-QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEY 118
           H    + ++ R++KP N+L     +V K+ DF  +  I    T  +    G+  ++ PE 
Sbjct: 119 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK----GSAAWMAPEV 174
Query: 119 IATGDCNEKCDVYSF 133
               + +EKCDV+S+
Sbjct: 175 FEGSNYSEKCDVFSW 189

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           +  E+ + GTL   I   R    + V   L L++  +I  G+ Y+H   S+ ++ R++KP
Sbjct: 97  IQMEFCDKGTLEQWIEKRRGEKLDKV---LALELFEQITKGVDYIH---SKKLINRDLKP 150
Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
           SNI   +    K+ DF    S+     R R +  GT  Y+ PE I++ D  ++ D+Y+ 
Sbjct: 151 SNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK--GTLRYMSPEQISSQDYGKEVDLYAL 207

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 4   IGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
           +G   +  N  +V EY+  G+L  R+ H +    E +    RL +A ++A G+ YLH   
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLY-RLLH-KSGAREQLDERRRLSMAYDVAKGMNYLH-NR 156
Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR-VMGTFGYLPPEYIATG 122
           + PIV RN+K  N+L  ++   K+ DF  S    +  T +  +   GT  ++ PE +   
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 123 DCNEKCDVYSF 133
             NEK DVYSF
Sbjct: 215 PSNEKSDVYSF 225

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 7/134 (5%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           + L+G   + ++  LV+ Y   G+L DR+         P++   R KIA   A GI +LH
Sbjct: 84  VELLGFSSDGDDLCLVYVYXPNGSLLDRL--SCLDGTPPLSWHXRCKIAQGAANGINFLH 141
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPE-GETRIRGRVMGTFGYLPPEYI 119
                  + R++K +NIL  E   AK+ DF  + +  +  +     R++GT  Y  PE +
Sbjct: 142 ---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL 198
Query: 120 ATGDCNEKCDVYSF 133
             G+   K D+YSF
Sbjct: 199 -RGEITPKSDIYSF 211

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 9/114 (7%)
Query: 9   ETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI 67
           ET++ + LV   +  G L   IYH  Q  F           A EI  G+  LH      I
Sbjct: 254 ETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF---YAAEICCGLEDLH---RERI 307
Query: 68  VFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
           V+R++KP NIL  +    ++ D   +  +PEG+T I+GRV GT GY+ PE +  
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEVVKN 359

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 4   IGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
           +G   +  N  +V EY+  G+L  R+ H +    E +    RL +A ++A G+ YLH   
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLY-RLLH-KSGAREQLDERRRLSMAYDVAKGMNYLH-NR 156
Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
           + PIV R++K  N+L  ++   K+ DF  S  +            GT  ++ PE +    
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR-LKASXFLXSKXAAGTPEWMAPEVLRDEP 215
Query: 124 CNEKCDVYSF 133
            NEK DVYSF
Sbjct: 216 SNEKSDVYSF 225

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LV   +  G L   IYH  Q  F           A EI  G+  LH      IV+R++KP
Sbjct: 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVF---YAAEICCGLEDLH---RERIVYRDLKP 314
Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
            NIL  +    ++ D   +  +PEG+T I+GRV GT GY+ PE +  
Sbjct: 315 ENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEVVKN 359

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 14/134 (10%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHP-RQPNFEPVTCSLRLKIAMEIAYGIAYL 59
           +R+ G   + +   ++ +Y+E G L   +    R PN  PV        A E+   + YL
Sbjct: 69  IRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPN--PVAKFY----AAEVCLALEYL 122
Query: 60  HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
           H   S+ I++R++KP NIL  +    K+ DF +++ +P+    +   + GT  Y+ PE +
Sbjct: 123 H---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCGTPDYIAPEVV 175
Query: 120 ATGDCNEKCDVYSF 133
           +T   N+  D +SF
Sbjct: 176 STKPYNKSIDWWSF 189

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   ++    L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 71  LRLYGYFHDSTRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 125
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 126 ---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYLPPEMIE 179
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 180 GRMHDEKVDLWSL 192

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Query: 13  PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAME-IAYGIAYLHVAFSRPIVFRN 71
           P +V EYV+  TL D I H   P        +  K A+E IA     L+ +    I+ R+
Sbjct: 91  PYIVMEYVDGVTLRD-IVHTEGP--------MTPKRAIEVIADACQALNFSHQNGIIHRD 141
Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRIR--GRVMGTFGYLPPEYIATGDCNEKCD 129
           VKP+NIL    +  K+ DF  + +I +    +     V+GT  YL PE       + + D
Sbjct: 142 VKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 130 VYSF 133
           VYS 
Sbjct: 202 VYSL 205

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Query: 13  PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAME-IAYGIAYLHVAFSRPIVFRN 71
           P +V EYV+  TL D I H   P        +  K A+E IA     L+ +    I+ R+
Sbjct: 91  PYIVMEYVDGVTLRD-IVHTEGP--------MTPKRAIEVIADACQALNFSHQNGIIHRD 141
Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRI--RGRVMGTFGYLPPEYIATGDCNEKCD 129
           VKP+NI+    +  K+ DF  + +I +    +     V+GT  YL PE       + + D
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 130 VYSF 133
           VYS 
Sbjct: 202 VYSL 205

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Query: 13  PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAME-IAYGIAYLHVAFSRPIVFRN 71
           P +V EYV+  TL D I H   P        +  K A+E IA     L+ +    I+ R+
Sbjct: 91  PYIVMEYVDGVTLRD-IVHTEGP--------MTPKRAIEVIADACQALNFSHQNGIIHRD 141
Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRI--RGRVMGTFGYLPPEYIATGDCNEKCD 129
           VKP+NI+    +  K+ DF  + +I +    +     V+GT  YL PE       + + D
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 130 VYSF 133
           VYS 
Sbjct: 202 VYSL 205

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLAD--RIYHPR-------QPNFEPVTCSLRLKIAME 51
           ++  G C+E +  ++VFEY+++G L    R + P         P  E +T S  L IA +
Sbjct: 78  VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTE-LTQSQMLHIAQQ 136
Query: 52  IAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGT 110
           IA G+ YL    S+  V R++   N L  E  + K+ DF  S  +   +  R+ G  M  
Sbjct: 137 IAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 193
Query: 111 FGYLPPEYIATGDCNEKCDVYSF 133
             ++PPE I       + DV+S 
Sbjct: 194 IRWMPPESIMYRKFTTESDVWSL 216

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Query: 13  PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAME-IAYGIAYLHVAFSRPIVFRN 71
           P +V EYV+  TL D I H   P        +  K A+E IA     L+ +    I+ R+
Sbjct: 108 PYIVMEYVDGVTLRD-IVHTEGP--------MTPKRAIEVIADACQALNFSHQNGIIHRD 158
Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRI--RGRVMGTFGYLPPEYIATGDCNEKCD 129
           VKP+NI+    +  K+ DF  + +I +    +     V+GT  YL PE       + + D
Sbjct: 159 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 218
Query: 130 VYSF 133
           VYS 
Sbjct: 219 VYSL 222

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE-----------PVTCSLRLKIA 49
           +R  G C E    ++VFEY+ +G L +R      P+ +           P+     L +A
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 50  MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVM 108
            ++A G+ YL        V R++   N L  +  V K+ DF  S  I   +  R+ GR M
Sbjct: 165 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 221
Query: 109 GTFGYLPPEYIATGDCNEKCDVYSF 133
               ++PPE I       + DV+SF
Sbjct: 222 LPIRWMPPESILYRKFTTESDVWSF 246

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Query: 13  PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAME-IAYGIAYLHVAFSRPIVFRN 71
           P +V EYV+  TL D I H   P        +  K A+E IA     L+ +    I+ R+
Sbjct: 91  PYIVMEYVDGVTLRD-IVHTEGP--------MTPKRAIEVIADACQALNFSHQNGIIHRD 141
Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRI--RGRVMGTFGYLPPEYIATGDCNEKCD 129
           VKP+NI+    +  K+ DF  + +I +    +     V+GT  YL PE       + + D
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 130 VYSF 133
           VYS 
Sbjct: 202 VYSL 205

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Query: 13  PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAME-IAYGIAYLHVAFSRPIVFRN 71
           P +V EYV+  TL D I H   P        +  K A+E IA     L+ +    I+ R+
Sbjct: 91  PYIVMEYVDGVTLRD-IVHTEGP--------MTPKRAIEVIADACQALNFSHQNGIIHRD 141
Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRI--RGRVMGTFGYLPPEYIATGDCNEKCD 129
           VKP+NI+    +  K+ DF  + +I +    +     V+GT  YL PE       + + D
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 130 VYSF 133
           VYS 
Sbjct: 202 VYSL 205

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10  TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
           T+ P+ ++ EY+E G+L D +   + P+   +T +  L +A +IA G+A++     R  +
Sbjct: 74  TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 127
Query: 69  FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
            RN++ +NIL  +    K+ DF  +  I + E   R        +  PE I  G    K 
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 187
Query: 129 DVYSF 133
           DV+SF
Sbjct: 188 DVWSF 192

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE-----------PVTCSLRLKIA 49
           +R  G C E    ++VFEY+ +G L +R      P+ +           P+     L +A
Sbjct: 77  VRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 50  MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVM 108
            ++A G+ YL        V R++   N L  +  V K+ DF  S  I   +  R+ GR M
Sbjct: 136 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 192
Query: 109 GTFGYLPPEYIATGDCNEKCDVYSF 133
               ++PPE I       + DV+SF
Sbjct: 193 LPIRWMPPESILYRKFTTESDVWSF 217

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE-----------PVTCSLRLKIA 49
           +R  G C E    ++VFEY+ +G L +R      P+ +           P+     L +A
Sbjct: 83  VRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 50  MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVM 108
            ++A G+ YL        V R++   N L  +  V K+ DF  S  I   +  R+ GR M
Sbjct: 142 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 198
Query: 109 GTFGYLPPEYIATGDCNEKCDVYSF 133
               ++PPE I       + DV+SF
Sbjct: 199 LPIRWMPPESILYRKFTTESDVWSF 223

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 75  LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSRFDEQRTATYI---TELANALSYCH 129
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 130 ---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---RDTLCGTLDYLPPEMIE 183
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 184 GRMHDEKVDLWSL 196

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 71  LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 125
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYLPPEMIE 179
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 180 GRMHDEKVDLWSL 192

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 74  LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 128
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 129 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYLPPEMIE 182
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 183 GRMHDEKVDLWSL 195

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 5   GCCLET--ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVA 62
           GCC +   ++  LV EYV  G+L D  Y PR      +  +  L  A +I  G+AYLH  
Sbjct: 83  GCCEDQGEKSLQLVMEYVPLGSLRD--YLPRHS----IGLAQLLLFAQQICEGMAYLH-- 134
Query: 63  FSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMG---TFGYLPPEYI 119
            S+  + RN+   N+L     + K+ DF  ++++PEG    R R  G    F Y  PE +
Sbjct: 135 -SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECL 192
Query: 120 ATGDCNEKCDVYSF 133
                    DV+SF
Sbjct: 193 KEYKFYYASDVWSF 206

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 76  LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 130
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 131 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEXIE 184
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 185 GRXHDEKVDLWSL 197

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 75  LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSRFDEQRTATYI---TELANALSYCH 129
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 130 ---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIE 183
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 184 GRMHDEKVDLWSL 196

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10  TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
           T+ P+ ++ EY+E G+L D +   + P+   +T +  L +A +IA G+A++     R  +
Sbjct: 78  TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 131
Query: 69  FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
            R+++ +NIL  +    K+ DF  +  I + E   R        +  PE I  G    K 
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 129 DVYSF 133
           DV+SF
Sbjct: 192 DVWSF 196

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10  TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
           T+ P+ ++ EY+E G+L D +   + P+   +T +  L +A +IA G+A++     R  +
Sbjct: 78  TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 131
Query: 69  FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
            R+++ +NIL  +    K+ DF  +  I + E   R        +  PE I  G    K 
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 129 DVYSF 133
           DV+SF
Sbjct: 192 DVWSF 196

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10  TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
           T+ P+ ++ EY+E G+L D +   + P+   +T +  L +A +IA G+A++     R  +
Sbjct: 80  TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 133
Query: 69  FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
            R+++ +NIL  +    K+ DF  +  I + E   R        +  PE I  G    K 
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 193
Query: 129 DVYSF 133
           DV+SF
Sbjct: 194 DVWSF 198

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10  TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
           T+ P+ ++ EY+E G+L D +   + P+   +T +  L +A +IA G+A++     R  +
Sbjct: 79  TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 132
Query: 69  FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
            R+++ +NIL  +    K+ DF  +  I + E   R        +  PE I  G    K 
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 129 DVYSF 133
           DV+SF
Sbjct: 193 DVWSF 197

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 72  LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 126
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 127 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RDTLCGTLDYLPPEMIE 180
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 181 GRMHDEKVDLWSL 193

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 71  LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 125
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTXLCGTLDYLPPEMIE 179
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 180 GRMHDEKVDLWSL 192

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 74  LRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYI---TELANALSYCH 128
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 129 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RDDLCGTLDYLPPEMIE 182
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 183 GRMHDEKVDLWSL 195

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 74  LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 128
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 129 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTLDYLPPEMIE 182
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 183 GRMHDEKVDLWSL 195

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 71  LRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYI---TELANALSYCH 125
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTELCGTLDYLPPEMIE 179
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 180 GRMHDEKVDLWSL 192

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 74  LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 128
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 129 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIE 182
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 183 GRMHDEKVDLWSL 195

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 14/135 (10%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           M+L     +  N  LV E  + G L D I H  +  F  V  ++ +K   ++  G+ YLH
Sbjct: 99  MKLYDFFEDKRNYYLVMECYKGGELFDEIIH--RMKFNEVDAAVIIK---QVLSGVTYLH 153
Query: 61  VAFSRPIVFRNVKPSNILFQEQ---SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPE 117
                 IV R++KP N+L + +   ++ K+ DF  S ++ E + +++ R +GT  Y+ PE
Sbjct: 154 ---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLS-AVFENQKKMKER-LGTAYYIAPE 208
Query: 118 YIATGDCNEKCDVYS 132
            +     +EKCDV+S
Sbjct: 209 -VLRKKYDEKCDVWS 222

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 70  LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 124
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 125 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIE 178
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 179 GRMHDEKVDLWSL 191

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 71  LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 125
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTLDYLPPEMIE 179
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 180 GRMHDEKVDLWSL 192

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 73  LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 127
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 128 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTLDYLPPEMIE 181
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 182 GRMHDEKVDLWSL 194

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10  TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
           T+ P+ ++ EY+E G+L D +   + P+   +T +  L +A +IA G+A++     R  +
Sbjct: 78  TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 131
Query: 69  FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
            R+++ +NIL  +    K+ DF  +  I + E   R        +  PE I  G    K 
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 129 DVYSF 133
           DV+SF
Sbjct: 192 DVWSF 196

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 68  LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 122
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 123 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIE 176
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 177 GRMHDEKVDLWSL 189

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10  TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
           T+ P+ ++ EY+E G+L D +   + P+   +T +  L +A +IA G+A++     R  +
Sbjct: 86  TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 139
Query: 69  FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
            R+++ +NIL  +    K+ DF  +  I + E   R        +  PE I  G    K 
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 199
Query: 129 DVYSF 133
           DV+SF
Sbjct: 200 DVWSF 204

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10  TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
           T+ P+ ++ EY+E G+L D +   + P+   +T +  L +A +IA G+A++     R  +
Sbjct: 87  TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 140
Query: 69  FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
            R+++ +NIL  +    K+ DF  +  I + E   R        +  PE I  G    K 
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 200
Query: 129 DVYSF 133
           DV+SF
Sbjct: 201 DVWSF 205

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 76  LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 130
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 131 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIE 184
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 185 GRMHDEKVDLWSL 197

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 75  LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 129
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 130 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIE 183
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 184 GRMHDEKVDLWSL 196

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 18/160 (11%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           + L G CL+  N  LV E+   G L   +   R P        + +  A++IA G+ YLH
Sbjct: 69  IALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPP------DILVNWAVQIARGMNYLH 122
Query: 61  VAFSRPIVFRNVKPSNILFQEQ--------SVAKLFDFSYSESIPEGETRIRGRVMGTFG 112
                PI+ R++K SNIL  ++         + K+ DF  +    E     +    G + 
Sbjct: 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR---EWHRTTKMSAAGAYA 179
Query: 113 YLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
           ++ PE I     ++  DV+S+ G      LTG   +R  D
Sbjct: 180 WMAPEVIRASMFSKGSDVWSY-GVLLWELLTGEVPFRGID 218

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 71  LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 125
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPEMIE 179
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 180 GRMHDEKVDLWSL 192

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 74  LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 128
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 129 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIE 182
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 183 GRMHDEKVDLWSL 195

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10  TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
           T+ P+ ++ EY+E G+L D +   + P+   +T +  L +A +IA G+A++     R  +
Sbjct: 84  TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 137
Query: 69  FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
            R+++ +NIL  +    K+ DF  +  I + E   R        +  PE I  G    K 
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 129 DVYSF 133
           DV+SF
Sbjct: 198 DVWSF 202

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 76  LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 130
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 131 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPEMIE 184
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 185 GRMHDEKVDLWSL 197

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 72  LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 126
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 127 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPEMIE 180
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 181 GRMHDEKVDLWSL 193

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 71  LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 125
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPEMIE 179
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 180 GRMHDEKVDLWSL 192

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 71  LRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYI---TELANALSYCH 125
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIE 179
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 180 GRMHDEKVDLWSL 192

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 52.8 bits (125), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 5   GCCLET--ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVA 62
           GCC +   ++  LV EYV  G+L D  Y PR      +  +  L  A +I  G+AYLH  
Sbjct: 83  GCCEDQGEKSLQLVMEYVPLGSLRD--YLPRHS----IGLAQLLLFAQQICEGMAYLH-- 134
Query: 63  FSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMG---TFGYLPPEYI 119
            ++  + RN+   N+L     + K+ DF  ++++PEG    R R  G    F Y  PE +
Sbjct: 135 -AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECL 192
Query: 120 ATGDCNEKCDVYSF 133
                    DV+SF
Sbjct: 193 KEYKFYYASDVWSF 206

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 52.8 bits (125), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 72  LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 126
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 127 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR---RTTLSGTLDYLPPEMIE 180
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 181 GRMHDEKVDLWSL 193

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 52.8 bits (125), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10  TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
           T+ P+ ++ EY+E G+L D +   + P+   +T +  L +A +IA G+A++     R  +
Sbjct: 78  TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 131
Query: 69  FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
            R+++ +NIL  +    K+ DF  +  I + E   R        +  PE I  G    K 
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 129 DVYSF 133
           DV+SF
Sbjct: 192 DVWSF 196

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10  TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
           T+ P+ ++ EY+E G+L D +   + P+   +T +  L +A +IA G+A++     R  +
Sbjct: 84  TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 137
Query: 69  FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
            R+++ +NIL  +    K+ DF  +  I + E   R        +  PE I  G    K 
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 129 DVYSF 133
           DV+SF
Sbjct: 198 DVWSF 202

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 88  LRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYI---TELANALSYCH 142
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 143 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIE 196
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 197 GRMHDEKVDLWSL 209

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10  TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
           T+ P+ ++ EY+E G+L D +   + P+   +T +  L +A +IA G+A++     R  +
Sbjct: 83  TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 136
Query: 69  FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
            R+++ +NIL  +    K+ DF  +  I + E   R        +  PE I  G    K 
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 196
Query: 129 DVYSF 133
           DV+SF
Sbjct: 197 DVWSF 201

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10  TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
           T+ P+ ++ EY+E G+L D +   + P+   +T +  L +A +IA G+A++     R  +
Sbjct: 73  TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 126
Query: 69  FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
            R+++ +NIL  +    K+ DF  +  I + E   R        +  PE I  G    K 
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 186
Query: 129 DVYSF 133
           DV+SF
Sbjct: 187 DVWSF 191

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 97  LRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYI---TELANALSYCH 151
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 152 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RDDLCGTLDYLPPEMIE 205
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 206 GRMHDEKVDLWSL 218

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10  TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
           T+ P+ ++ EY+E G+L D +   + P+   +T +  L +A +IA G+A++     R  +
Sbjct: 88  TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 141
Query: 69  FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
            R+++ +NIL  +    K+ DF  +  I + E   R        +  PE I  G    K 
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 201
Query: 129 DVYSF 133
           DV+SF
Sbjct: 202 DVWSF 206

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 17/146 (11%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIY------------HPRQPNFEPVTCSLRLKI 48
           ++  G C + +  ++VFEY+++G L   +              PRQ   E +  S  L I
Sbjct: 80  VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE-LGLSQMLHI 138
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRV 107
           A +IA G+ YL    S+  V R++   N L     + K+ DF  S  +   +  R+ G  
Sbjct: 139 ASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 108 MGTFGYLPPEYIATGDCNEKCDVYSF 133
           M    ++PPE I       + DV+SF
Sbjct: 196 MLPIRWMPPESIMYRKFTTESDVWSF 221

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 97  LRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYI---TELANALSYCH 151
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ DF +S   P      R  + GT  YLPPE I 
Sbjct: 152 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIE 205
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 206 GRMHDEKVDLWSL 218

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 32/161 (19%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LV E+ E G L ++I +  +  F+    +    I  +I  GI YLH      IV R++KP
Sbjct: 123 LVTEFYEGGELFEQIINRHK--FDECDAA---NIMKQILSGICYLH---KHNIVHRDIKP 174
Query: 75  SNILFQEQSV---AKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
            NIL + ++     K+ DF  S S    + ++R R +GT  Y+ PE +     NEKCDV+
Sbjct: 175 ENILLENKNSLLNIKIVDFGLS-SFFSKDYKLRDR-LGTAYYIAPE-VLKKKYNEKCDVW 231
Query: 132 S--------------FDGSRDSGHL----TGRAWYRSEDWK 154
           S              F G  D   +     G+ ++   DWK
Sbjct: 232 SCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWK 272

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 23/153 (15%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLAD--RIYHPR-----------------QPNFEPVT 41
           ++L+G C   +   L+FEY+ YG L +  R   P                   P   P++
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 42  CSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE- 100
           C+ +L IA ++A G+AYL     R  V R++   N L  E  V K+ DF  S +I   + 
Sbjct: 173 CAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY 229
Query: 101 TRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
            +  G       ++PPE I       + DV+++
Sbjct: 230 YKADGNDAIPIRWMPPESIFYNRYTTESDVWAY 262

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
           E+A  ++Y H   S+ ++ R++KP N+L       K+ DF +S   P      R  + GT
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLXGT 174
Query: 111 FGYLPPEYIATGDCNEKCDVYSF 133
             YLPPE I     +EK D++S 
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSL 197

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 5   GCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
           G  L+     ++ EY+  G+  D +   R   F+    +  LK   EI  G+ YLH   S
Sbjct: 88  GSYLKGSKLWIIMEYLGGGSALDLL---RAGPFDEFQIATMLK---EILKGLDYLH---S 138
Query: 65  RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC 124
              + R++K +N+L  EQ   KL DF  +  + + + + R   +GT  ++ PE I     
Sbjct: 139 EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK-RNTFVGTPFWMAPEVIQQSAY 197
Query: 125 NEKCDVYSF 133
           + K D++S 
Sbjct: 198 DSKADIWSL 206

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
           E+A  ++Y H   S+ ++ R++KP N+L       K+ DF +S   P      R  + GT
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGT 174
Query: 111 FGYLPPEYIATGDCNEKCDVYSF 133
             YLPPE I     +EK D++S 
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSL 197

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 15/134 (11%)
Query: 5   GCCLET--ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVA 62
           GCC +    +  LV EYV  G+L D  Y PR      +  +  L  A +I  G+AYLH  
Sbjct: 100 GCCEDAGAASLQLVMEYVPLGSLRD--YLPRHS----IGLAQLLLFAQQICEGMAYLH-- 151
Query: 63  FSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMG---TFGYLPPEYI 119
            ++  + R++   N+L     + K+ DF  ++++PEG    R R  G    F Y  PE +
Sbjct: 152 -AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-APECL 209
Query: 120 ATGDCNEKCDVYSF 133
                    DV+SF
Sbjct: 210 KEYKFYYASDVWSF 223

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 21/137 (15%)
Query: 5   GCCLET--ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVA 62
           GCC +   ++  LV EYV  G+L D  Y PR      V  +  L  A +I  G+AYLH  
Sbjct: 77  GCCEDQGEKSVQLVMEYVPLGSLRD--YLPRHC----VGLAQLLLFAQQICEGMAYLH-- 128
Query: 63  FSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG 122
            ++  + R +   N+L     + K+ DF  ++++PEG    R R  G      P +    
Sbjct: 129 -AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD----SPVFWYAP 183
Query: 123 DCNEKC------DVYSF 133
           +C ++C      DV+SF
Sbjct: 184 ECLKECKFYYASDVWSF 200

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 21/137 (15%)
Query: 5   GCCLET--ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVA 62
           GCC +   ++  LV EYV  G+L D  Y PR      V  +  L  A +I  G+AYLH  
Sbjct: 78  GCCEDQGEKSVQLVMEYVPLGSLRD--YLPRHC----VGLAQLLLFAQQICEGMAYLH-- 129
Query: 63  FSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG 122
            ++  + R +   N+L     + K+ DF  ++++PEG    R R  G      P +    
Sbjct: 130 -AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD----SPVFWYAP 184
Query: 123 DCNEKC------DVYSF 133
           +C ++C      DV+SF
Sbjct: 185 ECLKECKFYYASDVWSF 201

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 74  LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 128
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ +F +S   P      R  + GT  YLPPE I 
Sbjct: 129 ---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCGTLDYLPPEMIE 182
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 183 GRMHDEKVDLWSL 195

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +     L+ EY   GT+   +   +   F+    +  +    E+A  ++Y H
Sbjct: 73  LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 127
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ ++ R++KP N+L       K+ +F +S   P      R  + GT  YLPPE I 
Sbjct: 128 ---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCGTLDYLPPEMIE 181
Query: 121 TGDCNEKCDVYSF 133
               +EK D++S 
Sbjct: 182 GRMHDEKVDLWSL 194

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           R  G  L++    ++ EY+  G+  D +    +P   P+  +    I  EI  G+ YLH 
Sbjct: 81  RYFGSYLKSTKLWIIMEYLGGGSALDLL----KPG--PLEETYIATILREILKGLDYLH- 133
Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
             S   + R++K +N+L  EQ   KL DF  +  + + + + R   +GT  ++ PE I  
Sbjct: 134 --SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK-RNXFVGTPFWMAPEVIKQ 190
Query: 122 GDCNEKCDVYSF 133
              + K D++S 
Sbjct: 191 SAYDFKADIWSL 202

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 59  LHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM-GTFGYLPPE 117
           LH    R ++ R++KP N+L   +   K+ DF +S   P     +R R M GT  YLPPE
Sbjct: 128 LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPE 183
Query: 118 YIATGDCNEKCDVY 131
            I     +EK D++
Sbjct: 184 MIEGKTHDEKVDLW 197

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 59  LHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM-GTFGYLPPE 117
           LH    R ++ R++KP N+L   +   K+ DF +S   P     +R R M GT  YLPPE
Sbjct: 127 LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPE 182
Query: 118 YIATGDCNEKCDVY 131
            I     +EK D++
Sbjct: 183 MIEGKTHDEKVDLW 196

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +R+IG C E E+ +LV E  E G L   +   R    + +     +++  +++ G+ YL 
Sbjct: 75  VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 128
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPEY 118
                  V R++   N+L   Q  AK+ DF  S+++   E   + +  G +   +  PE 
Sbjct: 129 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPEC 185
Query: 119 IATGDCNEKCDVYSF 133
           I     + K DV+SF
Sbjct: 186 INYYKFSSKSDVWSF 200

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L G CLE     LVFE++E+G L+D +   R            L + +++  G+AYL 
Sbjct: 65  VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG----LFAAETLLGMCLDVCEGMAYLE 120
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
            A    ++ R++   N L  E  V K+ DF  +  + + +            +  PE  +
Sbjct: 121 EA---SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 177
Query: 121 TGDCNEKCDVYSF 133
               + K DV+SF
Sbjct: 178 FSRYSSKSDVWSF 190

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +R+IG C E E+ +LV E  E G L   +   R    + +     +++  +++ G+ YL 
Sbjct: 71  VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 124
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPEY 118
                  V R++   N+L   Q  AK+ DF  S+++   E   + +  G +   +  PE 
Sbjct: 125 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 181
Query: 119 IATGDCNEKCDVYSF 133
           I     + K DV+SF
Sbjct: 182 INYYKFSSKSDVWSF 196

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +R+IG C E E+ +LV E  E G L   +   R    + +     +++  +++ G+ YL 
Sbjct: 69  VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 122
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPEY 118
                  V R++   N+L   Q  AK+ DF  S+++   E   + +  G +   +  PE 
Sbjct: 123 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 179
Query: 119 IATGDCNEKCDVYSF 133
           I     + K DV+SF
Sbjct: 180 INYYKFSSKSDVWSF 194

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +R+IG C E E+ +LV E  E G L   +   R    + +     +++  +++ G+ YL 
Sbjct: 81  VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 134
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPEY 118
                  V R++   N+L   Q  AK+ DF  S+++   E   + +  G +   +  PE 
Sbjct: 135 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 191
Query: 119 IATGDCNEKCDVYSF 133
           I     + K DV+SF
Sbjct: 192 INYYKFSSKSDVWSF 206

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +R+IG C E E+ +LV E  E G L   +   R    + +     +++  +++ G+ YL 
Sbjct: 75  VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 128
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPEY 118
                  V R++   N+L   Q  AK+ DF  S+++   E   + +  G +   +  PE 
Sbjct: 129 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 185
Query: 119 IATGDCNEKCDVYSF 133
           I     + K DV+SF
Sbjct: 186 INYYKFSSKSDVWSF 200

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           + L+  C + +   LVFE+V++  L D    P   +++ V      K   +I  GI + H
Sbjct: 87  VNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQ-----KYLFQIINGIGFCH 141
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI 96
              S  I+ R++KP NIL  +  V KL DF ++ ++
Sbjct: 142 ---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTL 174

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +R+IG C E E+ +LV E  E G L   +   R    + +     +++  +++ G+ YL 
Sbjct: 89  VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 142
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPEY 118
                  V R++   N+L   Q  AK+ DF  S+++   E   + +  G +   +  PE 
Sbjct: 143 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 199
Query: 119 IATGDCNEKCDVYSF 133
           I     + K DV+SF
Sbjct: 200 INYYKFSSKSDVWSF 214

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L G CLE     LVFE++E+G L+D +   R            L + +++  G+AYL 
Sbjct: 68  VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG----LFAAETLLGMCLDVCEGMAYLE 123
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
            A    ++ R++   N L  E  V K+ DF  +  + + +            +  PE  +
Sbjct: 124 EA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 180
Query: 121 TGDCNEKCDVYSF 133
               + K DV+SF
Sbjct: 181 FSRYSSKSDVWSF 193

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +R+IG C E E+ +LV E  E G L   +   R    + +     +++  +++ G+ YL 
Sbjct: 91  VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 144
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPEY 118
                  V R++   N+L   Q  AK+ DF  S+++   E   + +  G +   +  PE 
Sbjct: 145 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 201
Query: 119 IATGDCNEKCDVYSF 133
           I     + K DV+SF
Sbjct: 202 INYYKFSSKSDVWSF 216

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +R+IG C E E+ +LV E  E G L   +   R    + +     +++  +++ G+ YL 
Sbjct: 91  VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 144
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPEY 118
                  V R++   N+L   Q  AK+ DF  S+++   E   + +  G +   +  PE 
Sbjct: 145 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 201
Query: 119 IATGDCNEKCDVYSF 133
           I     + K DV+SF
Sbjct: 202 INYYKFSSKSDVWSF 216

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L G CLE     LVFE++E+G L+D +   R            L + +++  G+AYL 
Sbjct: 63  VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG----LFAAETLLGMCLDVCEGMAYLE 118
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
            A    ++ R++   N L  E  V K+ DF  +  + + +            +  PE  +
Sbjct: 119 EA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 175
Query: 121 TGDCNEKCDVYSF 133
               + K DV+SF
Sbjct: 176 FSRYSSKSDVWSF 188

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L G CLE     LVFE++E+G L+D +   R            L + +++  G+AYL 
Sbjct: 65  VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG----LFAAETLLGMCLDVCEGMAYLE 120
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
            A    ++ R++   N L  E  V K+ DF  +  + + +            +  PE  +
Sbjct: 121 EA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 177
Query: 121 TGDCNEKCDVYSF 133
               + K DV+SF
Sbjct: 178 FSRYSSKSDVWSF 190

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L G CLE     LVFE++E+G L+D +   R            L + +++  G+AYL 
Sbjct: 85  VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG----LFAAETLLGMCLDVCEGMAYLE 140
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
            A    ++ R++   N L  E  V K+ DF  +  + + +            +  PE  +
Sbjct: 141 EA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 197
Query: 121 TGDCNEKCDVYSF 133
               + K DV+SF
Sbjct: 198 FSRYSSKSDVWSF 210

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
           +RL+G   + +  ++V E + +G L   +   R      P   P T    +++A EIA G
Sbjct: 80  VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
           +AYL+   ++  V R++   N +       K+ DF  +  I E +  R  G+ +    ++
Sbjct: 140 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 196
Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE +  G      D++SF
Sbjct: 197 APESLKDGVFTTSSDMWSF 215

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 12/144 (8%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L+ EY+  G L  ++   R+  F   T    L    EI+  + +LH    + I++R++KP
Sbjct: 98  LILEYLSGGELFMQL--EREGIFMEDTACFYL---AEISMALGHLH---QKGIIYRDLKP 149
Query: 75  SNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
            NI+   Q   KL DF    ESI +G   +     GT  Y+ PE +     N   D +S 
Sbjct: 150 ENIMLNHQGHVKLTDFGLCKESIHDGT--VTHXFCGTIEYMAPEILMRSGHNRAVDWWSL 207
Query: 134 DGSRDSGHLTGRAWYRSEDWKPAV 157
            G+     LTG   +  E+ K  +
Sbjct: 208 -GALMYDMLTGAPPFTGENRKKTI 230

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 12/144 (8%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L+ EY+  G L  ++   R+  F   T    L    EI+  + +LH    + I++R++KP
Sbjct: 98  LILEYLSGGELFMQL--EREGIFMEDTACFYL---AEISMALGHLH---QKGIIYRDLKP 149
Query: 75  SNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
            NI+   Q   KL DF    ESI +G   +     GT  Y+ PE +     N   D +S 
Sbjct: 150 ENIMLNHQGHVKLTDFGLCKESIHDGT--VTHTFCGTIEYMAPEILMRSGHNRAVDWWSL 207
Query: 134 DGSRDSGHLTGRAWYRSEDWKPAV 157
            G+     LTG   +  E+ K  +
Sbjct: 208 -GALMYDMLTGAPPFTGENRKKTI 230

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
           +RL+G   + +  ++V E + +G L   +   R      P   P T    +++A EIA G
Sbjct: 83  VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
           +AYL+   ++  V R++   N +       K+ DF  +  I E +  R  G+ +    ++
Sbjct: 143 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE +  G      D++SF
Sbjct: 200 APESLKDGVFTTSSDMWSF 218

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
           +RL+G   + +  ++V E + +G L   +   R      P   P T    +++A EIA G
Sbjct: 83  VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
           +AYL+   ++  V R++   N +       K+ DF  +  I E +  R  G+ +    ++
Sbjct: 143 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE +  G      D++SF
Sbjct: 200 APESLKDGVFTTSSDMWSF 218

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
           +RL+G   + +  ++V E + +G L   +   R      P   P T    +++A EIA G
Sbjct: 84  VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
           +AYL+   ++  V RN+   N +       K+ DF  +  I E +  R  G+ +    ++
Sbjct: 144 MAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE +  G      D++SF
Sbjct: 201 APESLKDGVFTTSSDMWSF 219

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 11/135 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +R+IG C E E+ +LV E  E G L   +   R    + +     +++  +++ G+ YL 
Sbjct: 434 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 487
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPEY 118
            +     V R++   N+L   Q  AK+ DF  S+++   E   + +  G +   +  PE 
Sbjct: 488 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 544
Query: 119 IATGDCNEKCDVYSF 133
           I     + K DV+SF
Sbjct: 545 INYYKFSSKSDVWSF 559

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 9   ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
           + E+  +V E +E G L D++   ++   +  TC L      ++   + YLH      I+
Sbjct: 85  DAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYF---YQMLLAVQYLH---ENGII 136
Query: 69  FRNVKPSNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEY---IATG 122
            R++KP N+L    +E  + K+ DF +S+ +  GET +   + GT  YL PE    + T 
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVGTA 194
Query: 123 DCNEKCDVYSF 133
             N   D +S 
Sbjct: 195 GYNRAVDCWSL 205

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
           +RL+G   + +  ++V E + +G L   +   R      P   P T    +++A EIA G
Sbjct: 83  VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
           +AYL+   ++  V RN+   N +       K+ DF  +  I E +  R  G+ +    ++
Sbjct: 143 MAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE +  G      D++SF
Sbjct: 200 APESLKDGVFTTSSDMWSF 218

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 8   LETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI 67
            + E+  +V E +E G L D++   ++   +  TC L      ++   + YLH      I
Sbjct: 223 FDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYF---YQMLLAVQYLH---ENGI 274
Query: 68  VFRNVKPSNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEY---IAT 121
           + R++KP N+L    +E  + K+ DF +S+ +  GET +   + GT  YL PE    + T
Sbjct: 275 IHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVGT 332
Query: 122 GDCNEKCDVYSF 133
              N   D +S 
Sbjct: 333 AGYNRAVDCWSL 344

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 9   ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
           + E+  +V E +E G L D++   ++   +  TC L      ++   + YLH      I+
Sbjct: 85  DAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYF---YQMLLAVQYLH---ENGII 136
Query: 69  FRNVKPSNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEY---IATG 122
            R++KP N+L    +E  + K+ DF +S+ +  GET +   + GT  YL PE    + T 
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVGTA 194
Query: 123 DCNEKCDVYSF 133
             N   D +S 
Sbjct: 195 GYNRAVDCWSL 205

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 9   ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
           + E+  +V E +E G L D++   ++   +  TC L      ++   + YLH      I+
Sbjct: 91  DAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYF---YQMLLAVQYLH---ENGII 142
Query: 69  FRNVKPSNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEY---IATG 122
            R++KP N+L    +E  + K+ DF +S+ +  GET +   + GT  YL PE    + T 
Sbjct: 143 HRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVGTA 200
Query: 123 DCNEKCDVYSF 133
             N   D +S 
Sbjct: 201 GYNRAVDCWSL 211

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 11/135 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +R+IG C E E+ +LV E  E G L   +   R    + +     +++  +++ G+ YL 
Sbjct: 433 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 486
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPEY 118
            +     V R++   N+L   Q  AK+ DF  S+++   E   + +  G +   +  PE 
Sbjct: 487 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 543
Query: 119 IATGDCNEKCDVYSF 133
           I     + K DV+SF
Sbjct: 544 INYYKFSSKSDVWSF 558

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 9   ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
           + E+  +V E +E G L D++   ++   +  TC L      ++   + YLH      I+
Sbjct: 84  DAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYF---YQMLLAVQYLH---ENGII 135
Query: 69  FRNVKPSNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEY---IATG 122
            R++KP N+L    +E  + K+ DF +S+ +  GET +   + GT  YL PE    + T 
Sbjct: 136 HRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVGTA 193
Query: 123 DCNEKCDVYSF 133
             N   D +S 
Sbjct: 194 GYNRAVDCWSL 204

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 9   ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
           + E+  +V E +E G L D++   ++   +  TC L      ++   + YLH      I+
Sbjct: 85  DAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYF---YQMLLAVQYLH---ENGII 136
Query: 69  FRNVKPSNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEY---IATG 122
            R++KP N+L    +E  + K+ DF +S+ +  GET +   + GT  YL PE    + T 
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVGTA 194
Query: 123 DCNEKCDVYSF 133
             N   D +S 
Sbjct: 195 GYNRAVDCWSL 205

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 8   LETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI 67
            + E+  +V E +E G L D++   ++   +  TC L      ++   + YLH      I
Sbjct: 209 FDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYF---YQMLLAVQYLH---ENGI 260
Query: 68  VFRNVKPSNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEY---IAT 121
           + R++KP N+L    +E  + K+ DF +S+ +  GET +   + GT  YL PE    + T
Sbjct: 261 IHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVGT 318
Query: 122 GDCNEKCDVYSF 133
              N   D +S 
Sbjct: 319 AGYNRAVDCWSL 330

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
           +RL+G   + +  +++ E +  G L   +   R      P   P + S  +++A EIA G
Sbjct: 85  VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
           +AYL+   +   V R++   N +  E    K+ DF  +  I E +  R  G+ +    ++
Sbjct: 145 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 201
Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE +  G      DV+SF
Sbjct: 202 SPESLKDGVFTTYSDVWSF 220

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 47  KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSV---AKLFDFSYSESIPEGETRI 103
           +I  ++  GI Y+H      IV R++KP NIL + +      K+ DF  S    +  T++
Sbjct: 125 RIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ-NTKM 180
Query: 104 RGRVMGTFGYLPPEYIATGDCNEKCDVYS 132
           + R+ GT  Y+ PE +  G  +EKCDV+S
Sbjct: 181 KDRI-GTAYYIAPE-VLRGTYDEKCDVWS 207

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
           +RL+G   + +  +++ E +  G L   +   R      P   P + S  +++A EIA G
Sbjct: 76  VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 135
Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
           +AYL+   +   V R++   N +  E    K+ DF  +  I E +  R  G+ +    ++
Sbjct: 136 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 192
Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE +  G      DV+SF
Sbjct: 193 SPESLKDGVFTTYSDVWSF 211

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+G C       +V EY+ YG L D +   R+ N E VT  + L +A +I+  + YL 
Sbjct: 91  VQLLGVCTLEPPFYIVTEYMPYGNLLDYL---RECNREEVTAVVLLYMATQISSAMEYLE 147
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + R++   N L  E  V K+ DF  S  +                +  PE +A
Sbjct: 148 ---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 204
Query: 121 TGDCNEKCDVYSF 133
               + K DV++F
Sbjct: 205 YNTFSIKSDVWAF 217

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 5   GCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
           G  L+     ++ EY+  G+  D +    +P   P+  +    I  EI  G+ YLH   S
Sbjct: 72  GSYLKDTKLWIIMEYLGGGSALDLL----EPG--PLDETQIATILREILKGLDYLH---S 122
Query: 65  RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC 124
              + R++K +N+L  E    KL DF  +  + + + + R   +GT  ++ PE I     
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNTFVGTPFWMAPEVIKQSAY 181
Query: 125 NEKCDVYSF 133
           + K D++S 
Sbjct: 182 DSKADIWSL 190

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 5   GCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
           G  L+     ++ EY+  G+  D +    +P   P+  +    I  EI  G+ YLH   S
Sbjct: 72  GSYLKDTKLWIIMEYLGGGSALDLL----EPG--PLDETQIATILREILKGLDYLH---S 122
Query: 65  RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC 124
              + R++K +N+L  E    KL DF  +  + + + + R   +GT  ++ PE I     
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNXFVGTPFWMAPEVIKQSAY 181
Query: 125 NEKCDVYSF 133
           + K D++S 
Sbjct: 182 DSKADIWSL 190

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 47  KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSV---AKLFDFSYSESIPEGETRI 103
           +I  ++  GI Y+H      IV R++KP NIL + +      K+ DF  S    +  T++
Sbjct: 125 RIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKM 180
Query: 104 RGRVMGTFGYLPPEYIATGDCNEKCDVYS 132
           + R+ GT  Y+ PE +  G  +EKCDV+S
Sbjct: 181 KDRI-GTAYYIAPE-VLRGTYDEKCDVWS 207

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 5   GCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
           G  L+     ++ EY+  G+  D +    +P   P+  +    I  EI  G+ YLH   S
Sbjct: 87  GSYLKDTKLWIIMEYLGGGSALDLL----EPG--PLDETQIATILREILKGLDYLH---S 137
Query: 65  RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC 124
              + R++K +N+L  E    KL DF  +  + + + + R   +GT  ++ PE I     
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNXFVGTPFWMAPEVIKQSAY 196
Query: 125 NEKCDVYSF 133
           + K D++S 
Sbjct: 197 DSKADIWSL 205

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 47  KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSV---AKLFDFSYSESIPEGETRI 103
           +I  ++  GI Y+H      IV R++KP NIL + +      K+ DF  S    +  T++
Sbjct: 125 RIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKM 180
Query: 104 RGRVMGTFGYLPPEYIATGDCNEKCDVYS 132
           + R+ GT  Y+ PE +  G  +EKCDV+S
Sbjct: 181 KDRI-GTAYYIAPE-VLRGTYDEKCDVWS 207

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 14/135 (10%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           M+L     +  N  LV E    G L D I   RQ  F  V  ++ +K   ++  G  YLH
Sbjct: 67  MKLYEFFEDKRNYYLVMEVYRGGELFDEII-LRQK-FSEVDAAVIMK---QVLSGTTYLH 121
Query: 61  VAFSRPIVFRNVKPSNILFQEQS---VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPE 117
                 IV R++KP N+L + +S   + K+ DF  S     G  +++ R +GT  Y+ PE
Sbjct: 122 ---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-GKMKER-LGTAYYIAPE 176
Query: 118 YIATGDCNEKCDVYS 132
            +     +EKCDV+S
Sbjct: 177 -VLRKKYDEKCDVWS 190

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 10/124 (8%)
Query: 12  NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
           N  +V E  E G L +RI    Q   + ++     ++  ++   +AY H   S+ +V ++
Sbjct: 94  NMYIVMETCEGGELLERIVSA-QARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKD 149
Query: 72  VKPSNILFQE---QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
           +KP NILFQ+    S  K+ DF  +E     E        GT  Y+ PE +   D   KC
Sbjct: 150 LKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNA--AGTALYMAPE-VFKRDVTFKC 206
Query: 129 DVYS 132
           D++S
Sbjct: 207 DIWS 210

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 7   CLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
             +TE  + L+ +++  G L  R+        E V   L      E+A G+ +LH   S 
Sbjct: 98  AFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL-----AELALGLDHLH---SL 149
Query: 66  PIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN 125
            I++R++KP NIL  E+   KL DF  S+   + E +      GT  Y+ PE +     +
Sbjct: 150 GIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS-FCGTVEYMAPEVVNRQGHS 208
Query: 126 EKCDVYSFDGSRDSGHLTGRAWYRSEDWKPAV 157
              D +S+ G      LTG   ++ +D K  +
Sbjct: 209 HSADWWSY-GVLMFEMLTGSLPFQGKDRKETM 239

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 5   GCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
           G  L+     ++ EY+  G+  D +    +P   P+  +    I  EI  G+ YLH   S
Sbjct: 92  GSYLKDTKLWIIMEYLGGGSALDLL----EPG--PLDETQIATILREILKGLDYLH---S 142
Query: 65  RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC 124
              + R++K +N+L  E    KL DF  +  + + + + R   +GT  ++ PE I     
Sbjct: 143 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNTFVGTPFWMAPEVIKQSAY 201
Query: 125 NEKCDVYSF 133
           + K D++S 
Sbjct: 202 DSKADIWSL 210

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 14/121 (11%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LV E    G L D I   ++  F  V  +   +I  ++  GI Y+H      IV R++KP
Sbjct: 126 LVGEVYTGGELFDEIISRKR--FSEVDAA---RIIRQVLSGITYMH---KNKIVHRDLKP 177
Query: 75  SNILFQEQSV---AKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
            N+L + +S     ++ DF  S    E   +++ ++ GT  Y+ PE +  G  +EKCDV+
Sbjct: 178 ENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVW 234
Query: 132 S 132
           S
Sbjct: 235 S 235

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 20/146 (13%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++ IG   + +    + EY++ GTL   I    +        S R+  A +IA G+AYLH
Sbjct: 70  LKFIGVLYKDKRLNFITEYIKGGTLRGII----KSMDSQYPWSQRVSFAKDIASGMAYLH 125
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS------ESIPEG-------ETRIRGRV 107
              S  I+ R++   N L +E     + DF  +      ++ PEG       + + R  V
Sbjct: 126 ---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTV 182
Query: 108 MGTFGYLPPEYIATGDCNEKCDVYSF 133
           +G   ++ PE I     +EK DV+SF
Sbjct: 183 VGNPYWMAPEMINGRSYDEKVDVFSF 208

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 14/121 (11%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LV E    G L D I   ++  F  V  +   +I  ++  GI Y+H      IV R++KP
Sbjct: 103 LVGEVYTGGELFDEIISRKR--FSEVDAA---RIIRQVLSGITYMH---KNKIVHRDLKP 154
Query: 75  SNILFQEQSV---AKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
            N+L + +S     ++ DF  S    E   +++ ++ GT  Y+ PE +  G  +EKCDV+
Sbjct: 155 ENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVW 211
Query: 132 S 132
           S
Sbjct: 212 S 212

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 14/121 (11%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LV E    G L D I   ++  F  V  +   +I  ++  GI Y+H      IV R++KP
Sbjct: 127 LVGEVYTGGELFDEIISRKR--FSEVDAA---RIIRQVLSGITYMH---KNKIVHRDLKP 178
Query: 75  SNILFQEQSV---AKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
            N+L + +S     ++ DF  S    E   +++ ++ GT  Y+ PE +  G  +EKCDV+
Sbjct: 179 ENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVW 235
Query: 132 S 132
           S
Sbjct: 236 S 236

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           M+L     +  N  LV E    G L D I    +  F  V  ++ +K   ++  G  YLH
Sbjct: 84  MKLYEFFEDKRNYYLVMEVYRGGELFDEII--LRQKFSEVDAAVIMK---QVLSGTTYLH 138
Query: 61  VAFSRPIVFRNVKPSNILFQEQS---VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPE 117
                 IV R++KP N+L + +S   + K+ DF  S     G  +++ R +GT  Y+ PE
Sbjct: 139 ---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-GKMKER-LGTAYYIAPE 193
Query: 118 YIATGDCNEKCDVYS 132
            +     +EKCDV+S
Sbjct: 194 -VLRKKYDEKCDVWS 207

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 14/121 (11%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LV E    G L D I   ++  F  V  +   +I  ++  GI Y+H      IV R++KP
Sbjct: 109 LVGEVYTGGELFDEIISRKR--FSEVDAA---RIIRQVLSGITYMH---KNKIVHRDLKP 160
Query: 75  SNILFQEQSV---AKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
            N+L + +S     ++ DF  S    E   +++ ++ GT  Y+ PE +  G  +EKCDV+
Sbjct: 161 ENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVW 217
Query: 132 S 132
           S
Sbjct: 218 S 218

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
           +RL+G   + +  ++V E + +G L   +   R      P   P T    +++A EIA G
Sbjct: 83  VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
           +AYL+   ++  V R++   N +       K+ DF  +  I E +  R  G+ +    ++
Sbjct: 143 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE +  G      D++SF
Sbjct: 200 APESLKDGVFTTSSDMWSF 218

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
           +RL+G   + +  ++V E + +G L   +   R      P   P T    +++A EIA G
Sbjct: 82  VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
           +AYL+   ++  V R++   N +       K+ DF  +  I E +  R  G+ +    ++
Sbjct: 142 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE +  G      D++SF
Sbjct: 199 APESLKDGVFTTSSDMWSF 217

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
           +RL+G   + +  +++ E +  G L   +   R      P   P + S  +++A EIA G
Sbjct: 81  VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 140
Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
           +AYL+   +   V R++   N +  E    K+ DF  +  I E +  R  G+ +    ++
Sbjct: 141 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 197
Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE +  G      DV+SF
Sbjct: 198 SPESLKDGVFTTYSDVWSF 216

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 7   CLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
             +TE  + L+ +++  G L  R+        E V   L      E+A  + +LH   S 
Sbjct: 95  AFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL-----AELALALDHLH---SL 146
Query: 66  PIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN 125
            I++R++KP NIL  E+   KL DF  S+   + E +      GT  Y+ PE +      
Sbjct: 147 GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMAPEVVNRRGHT 205
Query: 126 EKCDVYSFDGSRDSGHLTGRAWYRSEDWKPAV 157
           +  D +SF G      LTG   ++ +D K  +
Sbjct: 206 QSADWWSF-GVLMFEMLTGTLPFQGKDRKETM 236

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 7   CLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
             +TE  + L+ +++  G L  R+        E V   L      E+A  + +LH   S 
Sbjct: 94  AFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL-----AELALALDHLH---SL 145
Query: 66  PIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN 125
            I++R++KP NIL  E+   KL DF  S+   + E +      GT  Y+ PE +      
Sbjct: 146 GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMAPEVVNRRGHT 204
Query: 126 EKCDVYSFDGSRDSGHLTGRAWYRSEDWKPAV 157
           +  D +SF G      LTG   ++ +D K  +
Sbjct: 205 QSADWWSF-GVLMFEMLTGTLPFQGKDRKETM 235

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
           +RL+G   + +  +++ E +  G L   +   R      P   P + S  +++A EIA G
Sbjct: 78  VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
           +AYL+   +   V R++   N +  E    K+ DF  +  I E +  R  G+ +    ++
Sbjct: 138 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 194
Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE +  G      DV+SF
Sbjct: 195 SPESLKDGVFTTYSDVWSF 213

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
           +RL+G   + +  +++ E +  G L   +   R      P   P + S  +++A EIA G
Sbjct: 82  VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 141
Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
           +AYL+   +   V R++   N +  E    K+ DF  +  I E +  R  G+ +    ++
Sbjct: 142 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE +  G      DV+SF
Sbjct: 199 SPESLKDGVFTTYSDVWSF 217

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 11/148 (7%)
Query: 6   CCLET-ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
           C  +T EN   V EY+  G L   I    + +    T       A EI  G+ +LH   S
Sbjct: 86  CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF-----YAAEIILGLQFLH---S 137
Query: 65  RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC 124
           + IV+R++K  NIL  +    K+ DF   +    G+ +      GT  Y+ PE +     
Sbjct: 138 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT-NEFCGTPDYIAPEILLGQKY 196
Query: 125 NEKCDVYSFDGSRDSGHLTGRAWYRSED 152
           N   D +SF G      L G++ +  +D
Sbjct: 197 NHSVDWWSF-GVLLYEMLIGQSPFHGQD 223

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
           +RL+G   + +  +++ E +  G L   +   R      P   P + S  +++A EIA G
Sbjct: 85  VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
           +AYL+   +   V R++   N +  E    K+ DF  +  I E +  R  G+ +    ++
Sbjct: 145 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 201
Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE +  G      DV+SF
Sbjct: 202 SPESLKDGVFTTYSDVWSF 220

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 11/148 (7%)
Query: 6   CCLET-ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
           C  +T EN   V EY+  G L   I    + +    T       A EI  G+ +LH   S
Sbjct: 85  CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF-----YAAEIILGLQFLH---S 136
Query: 65  RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC 124
           + IV+R++K  NIL  +    K+ DF   +    G+ +      GT  Y+ PE +     
Sbjct: 137 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT-NXFCGTPDYIAPEILLGQKY 195
Query: 125 NEKCDVYSFDGSRDSGHLTGRAWYRSED 152
           N   D +SF G      L G++ +  +D
Sbjct: 196 NHSVDWWSF-GVLLYEMLIGQSPFHGQD 222

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 13  PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLR----LKIAMEIAYGIAYLHVAFSRPIV 68
           P+L  EY E G L  R Y  +  N     C L+      +  +I+  + YLH      I+
Sbjct: 94  PLLAMEYCEGGDL--RKYLNQFEN----CCGLKEGPIRTLLSDISSALRYLH---ENRII 144
Query: 69  FRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN 125
            R++KP NI+ Q   ++ + K+ D  Y++ + +GE  +    +GT  YL PE +      
Sbjct: 145 HRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYT 202
Query: 126 EKCDVYSF 133
              D +SF
Sbjct: 203 VTVDYWSF 210

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 13  PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLR----LKIAMEIAYGIAYLHVAFSRPIV 68
           P+L  EY E G L  R Y  +  N     C L+      +  +I+  + YLH      I+
Sbjct: 93  PLLAMEYCEGGDL--RKYLNQFEN----CCGLKEGPIRTLLSDISSALRYLH---ENRII 143
Query: 69  FRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN 125
            R++KP NI+ Q   ++ + K+ D  Y++ + +GE  +    +GT  YL PE +      
Sbjct: 144 HRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYT 201
Query: 126 EKCDVYSF 133
              D +SF
Sbjct: 202 VTVDYWSF 209

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
           +RL+G   + +  +++ E +  G L   +   R      P   P + S  +++A EIA G
Sbjct: 84  VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
           +AYL+   +   V R++   N +  E    K+ DF  +  I E +  R  G+ +    ++
Sbjct: 144 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE +  G      DV+SF
Sbjct: 201 SPESLKDGVFTTYSDVWSF 219

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 14/144 (9%)
Query: 1   MRLIGCCLETENPVLVF-EYVEYGTLADRI---------YHPRQPNFEPVTCSLRLKIAM 50
           + L+G C +   P++V  E+ ++G L+  +         Y P     + +T    +  + 
Sbjct: 96  VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSF 155
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GRVMG 109
           ++A G+ +L    SR  + R++   NIL  E++V K+ DF  +  I +    +R G    
Sbjct: 156 QVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
              ++ PE I       + DV+SF
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSF 236

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
           +RL+G   + +  +++ E +  G L   +   R      P   P + S  +++A EIA G
Sbjct: 84  VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
           +AYL+   +   V R++   N +  E    K+ DF  +  I E +  R  G+ +    ++
Sbjct: 144 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE +  G      DV+SF
Sbjct: 201 SPESLKDGVFTTYSDVWSF 219

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 16/103 (15%)
Query: 43  SLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-- 100
           S+ L I ++IA  + +LH   S+ ++ R++KPSNI F    V K+ DF    ++ + E  
Sbjct: 118 SVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE 174
Query: 101 ----------TRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
                      R  G+V GT  Y+ PE I     + K D++S 
Sbjct: 175 QTVLTPMPAYARHTGQV-GTKLYMSPEQIHGNSYSHKVDIFSL 216

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
           +RL+G   + +  +++ E +  G L   +   R      P   P + S  +++A EIA G
Sbjct: 113 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 172
Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
           +AYL+   +   V R++   N +  E    K+ DF  +  I E +  R  G+ +    ++
Sbjct: 173 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 229
Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE +  G      DV+SF
Sbjct: 230 SPESLKDGVFTTYSDVWSF 248

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 68/140 (48%), Gaps = 10/140 (7%)
Query: 1   MRLIGCCLETEN-----PVLVFEYVEYGTLADRIYHPR-QPNFEPVTCSLRLKIAMEIAY 54
           +RL+G C+E  +     P+++  +++YG L   + + R +   + +     LK  ++IA 
Sbjct: 99  IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL 158
Query: 55  GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT-FGY 113
           G+ YL    +R  + R++   N + ++     + DF  S+ I  G+   +GR+      +
Sbjct: 159 GMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW 215
Query: 114 LPPEYIATGDCNEKCDVYSF 133
           +  E +A      K DV++F
Sbjct: 216 IAIESLADRVYTSKSDVWAF 235

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
           +RL+G   + +  +++ E +  G L   +   R      P   P + S  +++A EIA G
Sbjct: 91  VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 150
Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
           +AYL+   +   V R++   N +  E    K+ DF  +  I E +  R  G+ +    ++
Sbjct: 151 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 207
Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE +  G      DV+SF
Sbjct: 208 SPESLKDGVFTTYSDVWSF 226

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 7   CLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
             +TE  + L+ +++  G L  R+        E V   L      E+A  + +LH   S 
Sbjct: 94  AFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL-----AELALALDHLH---SL 145
Query: 66  PIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN 125
            I++R++KP NIL  E+   KL DF  S+   + E +      GT  Y+ PE +      
Sbjct: 146 GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMAPEVVNRRGHT 204
Query: 126 EKCDVYSFDGSRDSGHLTGRAWYRSEDWKPAV 157
           +  D +SF G      LTG   ++ +D K  +
Sbjct: 205 QSADWWSF-GVLMFEMLTGTLPFQGKDRKETM 235

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
           +RL+G   + +  +++ E +  G L   +   R      P   P + S  +++A EIA G
Sbjct: 91  VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 150
Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
           +AYL+   +   V R++   N +  E    K+ DF  +  I E +  R  G+ +    ++
Sbjct: 151 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 207
Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE +  G      DV+SF
Sbjct: 208 SPESLKDGVFTTYSDVWSF 226

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+G C       ++ E++ YG L D +   R+ N + V+  + L +A +I+  + YL 
Sbjct: 279 VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE 335
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + RN+   N L  E  + K+ DF  S  +                +  PE +A
Sbjct: 336 ---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 392
Query: 121 TGDCNEKCDVYSF 133
               + K DV++F
Sbjct: 393 YNKFSIKSDVWAF 405

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L G CLE     LV E++E+G L+D +   R            L + +++  G+AYL 
Sbjct: 66  VQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRG----LFAAETLLGMCLDVCEGMAYLE 121
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
            A    ++ R++   N L  E  V K+ DF  +  + + +            +  PE  +
Sbjct: 122 EA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 178
Query: 121 TGDCNEKCDVYSF 133
               + K DV+SF
Sbjct: 179 FSRYSSKSDVWSF 191

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LV E+   G++ D I + +    +    +    I  EI  G+++LH      ++ R++K 
Sbjct: 104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAY---ICREILRGLSHLH---QHKVIHRDIKG 157
Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCD-VYSF 133
            N+L  E +  KL DF  S  +     R R   +GT  ++ PE IA   C+E  D  Y F
Sbjct: 158 QNVLLTENAEVKLVDFGVSAQLDRTVGR-RNTFIGTPYWMAPEVIA---CDENPDATYDF 213

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
           +RL+G   + +  ++V E + +G L   +   R      P   P T    +++A EIA G
Sbjct: 83  VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
           +AYL+   ++  V R++   N +       K+ DF  +  I E    R  G+ +    ++
Sbjct: 143 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWM 199
Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE +  G      D++SF
Sbjct: 200 APESLKDGVFTTSSDMWSF 218

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 14/143 (9%)
Query: 1   MRLIGCCLETENPVLVF-EYVEYGTLADRIYHPRQPNFEP--------VTCSLRLKIAME 51
           + L+G C +   P++V  E+ ++G L+  +   R   F P        +T    +  + +
Sbjct: 94  VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKDLYKDFLTLEHLIXYSFQ 152
Query: 52  IAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GRVMGT 110
           +A G+ +L    SR  + R++   NIL  E++V K+ DF  +  I +    +R G     
Sbjct: 153 VAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP 209
Query: 111 FGYLPPEYIATGDCNEKCDVYSF 133
             ++ PE I       + DV+SF
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSF 232

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+G C       ++ E++ YG L D +   R+ N + V+  + L +A +I+  + YL 
Sbjct: 70  VQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + R++   N L  E  + K+ DF  S  +                +  PE +A
Sbjct: 127 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLA 183
Query: 121 TGDCNEKCDVYSF 133
               + K DV++F
Sbjct: 184 YNKFSIKSDVWAF 196

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+G C       ++ E++ YG L D +   R+ N + V   + L +A +I+  + YL 
Sbjct: 318 VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 374
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + RN+   N L  E  + K+ DF  S  +                +  PE +A
Sbjct: 375 ---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 431
Query: 121 TGDCNEKCDVYSF 133
               + K DV++F
Sbjct: 432 YNKFSIKSDVWAF 444

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
           +RL+G   + +  +++ E +  G L   +   R      P   P + S  +++A EIA G
Sbjct: 78  VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
           +AYL+   +   V R++   N    E    K+ DF  +  I E +  R  G+ +    ++
Sbjct: 138 MAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 194
Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE +  G      DV+SF
Sbjct: 195 SPESLKDGVFTTYSDVWSF 213

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LV E    G L D I   ++  F  V  +   +I  ++  GI Y H      IV R++KP
Sbjct: 103 LVGEVYTGGELFDEIISRKR--FSEVDAA---RIIRQVLSGITYXH---KNKIVHRDLKP 154
Query: 75  SNILFQEQSV---AKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
            N+L + +S     ++ DF  S    E   + + ++ GT  Y+ PE +  G  +EKCDV+
Sbjct: 155 ENLLLESKSKDANIRIIDFGLSTHF-EASKKXKDKI-GTAYYIAPE-VLHGTYDEKCDVW 211
Query: 132 S 132
           S
Sbjct: 212 S 212

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   K+ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   K+ DF +++       R++GR  
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-------RVKGRTW 197
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWAL 225

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+G C       ++ E++ YG L D +   R+ N + V+  + L +A +I+  + YL 
Sbjct: 72  VQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + R++   N L  E  + K+ DF  S  +                +  PE +A
Sbjct: 129 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 121 TGDCNEKCDVYSF 133
               + K DV++F
Sbjct: 186 YNKFSIKSDVWAF 198

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   K+ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+G C       ++ E++ YG L D +   R+ N + V   + L +A +I+  + YL 
Sbjct: 73  VQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + R++   N L  E  + K+ DF  S  +                +  PE +A
Sbjct: 130 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLA 186
Query: 121 TGDCNEKCDVYSF 133
               + K DV++F
Sbjct: 187 YNKFSIKSDVWAF 199

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   K+ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
           +I  G+ +LH    R I++R++KP N+L  +    ++ D   +  +  G+T+ +G   GT
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GT 352
Query: 111 FGYLPPEYIATGDCNEKCDVYSF 133
            G++ PE +   + +   D ++ 
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFAL 375

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 16/100 (16%)
Query: 46  LKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRI-- 103
           L I ++IA  + +LH   S+ ++ R++KPSNI F    V K+ DF    ++ + E     
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 104 ----------RGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
                      G+V GT  Y+ PE I   + + K D++S 
Sbjct: 224 LTPMPAYATHXGQV-GTKLYMSPEQIHGNNYSHKVDIFSL 262

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+G C       ++ E++ YG L D +   R+ N + V+  + L +A +I+  + YL 
Sbjct: 72  VQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + R++   N L  E  + K+ DF  S  +                +  PE +A
Sbjct: 129 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 121 TGDCNEKCDVYSF 133
               + K DV++F
Sbjct: 186 YNKFSIKSDVWAF 198

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
           +I  G+ +LH    R I++R++KP N+L  +    ++ D   +  +  G+T+ +G   GT
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GT 352
Query: 111 FGYLPPEYIATGDCNEKCDVYSF 133
            G++ PE +   + +   D ++ 
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFAL 375

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
           +I  G+ +LH    R I++R++KP N+L  +    ++ D   +  +  G+T+ +G   GT
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GT 352
Query: 111 FGYLPPEYIATGDCNEKCDVYSF 133
            G++ PE +   + +   D ++ 
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFAL 375

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  EQ   ++ DF +++       R++GR  
Sbjct: 134 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAK-------RVKGRTW 183
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 184 XLCGTPEYLAPEIILSKGYNKAVDWWAL 211

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
           +I  G+ +LH    R I++R++KP N+L  +    ++ D   +  +  G+T+ +G   GT
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GT 352
Query: 111 FGYLPPEYIATGDCNEKCDVYSF 133
            G++ PE +   + +   D ++ 
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFAL 375

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+G C       ++ E++ YG L D +   R+ N + V+  + L +A +I+  + YL 
Sbjct: 70  VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + R++   N L  E  + K+ DF  S  +                +  PE +A
Sbjct: 127 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLA 183
Query: 121 TGDCNEKCDVYSF 133
               + K DV++F
Sbjct: 184 YNKFSIKSDVWAF 196

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 14  VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
            +V ++ E  +L   + H  +  FE       + IA + A G+ YLH   ++ I+ R++K
Sbjct: 95  AIVTQWCEGSSLYHHL-HASETKFEMKKL---IDIARQTARGMDYLH---AKSIIHRDLK 147
Query: 74  PSNILFQEQSVAKLFDFSYSESIPEGETRIRG-----RVMGTFGYLPPEYIATGDCNE-- 126
            +NI   E +  K+ DF  +      ++R  G     ++ G+  ++ PE I   D N   
Sbjct: 148 SNNIFLHEDNTVKIGDFGLATE----KSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 127 -KCDVYSF 133
            + DVY+F
Sbjct: 204 FQSDVYAF 211

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 14  VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
            +V ++ E  +L   + H  +  FE       + IA + A G+ YLH   ++ I+ R++K
Sbjct: 95  AIVTQWCEGSSLYHHL-HASETKFEMKKL---IDIARQTARGMDYLH---AKSIIHRDLK 147
Query: 74  PSNILFQEQSVAKLFDFSYSESIPEGETRIRG-----RVMGTFGYLPPEYIATGDCNE-- 126
            +NI   E +  K+ DF  +      ++R  G     ++ G+  ++ PE I   D N   
Sbjct: 148 SNNIFLHEDNTVKIGDFGLATE----KSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 127 -KCDVYSF 133
            + DVY+F
Sbjct: 204 FQSDVYAF 211

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+G C       ++ E++ YG L D +   R+ N + V   + L +A +I+  + YL 
Sbjct: 77  VQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + R++   N L  E  + K+ DF  S  +                +  PE +A
Sbjct: 134 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 121 TGDCNEKCDVYSF 133
               + K DV++F
Sbjct: 191 YNKFSIKSDVWAF 203

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR-- 106
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 107 -VMGTFGYLPPEYIATGDCNEKCDVYSF 133
            + GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLXGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR-- 106
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 107 -VMGTFGYLPPEYIATGDCNEKCDVYSF 133
            + GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLAGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 13/125 (10%)
Query: 14  VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
            +V ++ E  +L   + H  +  FE       + IA + A G+ YLH   ++ I+ R++K
Sbjct: 83  AIVTQWCEGSSLYHHL-HASETKFEMKKL---IDIARQTARGMDYLH---AKSIIHRDLK 135
Query: 74  PSNILFQEQSVAKLFDFSYS--ESIPEGETRIRGRVMGTFGYLPPEYIATGDCNE---KC 128
            +NI   E +  K+ DF  +  +S   G  +   ++ G+  ++ PE I   D N    + 
Sbjct: 136 SNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQDSNPYSFQS 194
Query: 129 DVYSF 133
           DVY+F
Sbjct: 195 DVYAF 199

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM---EIAYGIAYLHVAFSRPIVFRN 71
           +V EY+  G+L D +           TC    +IA    E    + +LH   S  ++ RN
Sbjct: 95  VVMEYLAGGSLTDVVTE---------TCMDEGQIAAVCRECLQALEFLH---SNQVIHRN 142
Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
           +K  NIL       KL DF +   I   +++ R  ++GT  ++ PE +       K D++
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSTMVGTPYWMAPEVVTRKAYGPKVDIW 201
Query: 132 SF 133
           S 
Sbjct: 202 SL 203

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+G C       ++ E++ YG L D +   R+ N + V   + L +A +I+  + YL 
Sbjct: 77  VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + R++   N L  E  + K+ DF  S  +                +  PE +A
Sbjct: 134 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLA 190
Query: 121 TGDCNEKCDVYSF 133
               + K DV++F
Sbjct: 191 YNKFSIKSDVWAF 203

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N++  +Q   K+ DF +++       R++GR  
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-------RVKGRTW 197
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWAL 225

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 59/111 (53%), Gaps = 10/111 (9%)
Query: 15  LVFEYVEYGTLA--DRIYHPRQPNFEPVTCSLRLKIAMEIAYGI--AYLHVAFSRPIVFR 70
           +++EY+E  ++   D  +     N+   TC + +++   I   +  ++ ++   + I  R
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNY---TCFIPIQVIKCIIKSVLNSFSYIHNEKNICHR 176
Query: 71  NVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
           +VKPSNIL  +    KL DF  SE + +   +I+G   GT+ ++PPE+ + 
Sbjct: 177 DVKPSNILMDKNGRVKLSDFGESEYMVDK--KIKGS-RGTYEFMPPEFFSN 224

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 60/152 (39%), Gaps = 32/152 (21%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEP-----------VTCSLRLKIA 49
           + L+G C       L  EY  +G L D +   R    +P           ++    L  A
Sbjct: 86  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 50  MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR--- 106
            ++A G+ YL     +  + RN+   NIL  E  VAK+ DF  S          RG+   
Sbjct: 146 ADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLS----------RGQEVY 192
Query: 107 VMGTFGYLPPEYIATGDCN-----EKCDVYSF 133
           V  T G LP  ++A    N        DV+S+
Sbjct: 193 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY 224

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N++  +Q   K+ DF +++       R++GR  
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-------RVKGRTW 197
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWAL 225

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N++  +Q   K+ DF +++       R++GR  
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-------RVKGRTW 197
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWAL 225

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N++  +Q   K+ DF +++       R++GR  
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-------RVKGRTW 197
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWAL 225

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 17/146 (11%)
Query: 1   MRLIGCCLETENPVLVF-EYVEYGTLADRIYHPRQPNFEP-----------VTCSLRLKI 48
           + L+G C +   P++V  E+ ++G L+  +   R   F P           +T    +  
Sbjct: 95  VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKTPEDLYKDFLTLEHLICY 153
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GRV 107
           + ++A G+ +L    SR  + R++   NIL  E++V K+ DF  +  I +    +R G  
Sbjct: 154 SFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 108 MGTFGYLPPEYIATGDCNEKCDVYSF 133
                ++ PE I       + DV+SF
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSF 236

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N++  +Q   K+ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N++  +Q   K+ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+G C       ++ E++ YG L D +   R+ N + V+  + L +A +I+  + YL 
Sbjct: 72  VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + R++   N L  E  + K+ DF  S  +                +  PE +A
Sbjct: 129 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 121 TGDCNEKCDVYSF 133
               + K DV++F
Sbjct: 186 YNKFSIKSDVWAF 198

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+G C       ++ E++ YG L D +   R+ N + V+  + L +A +I+  + YL 
Sbjct: 72  VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + R++   N L  E  + K+ DF  S  +                +  PE +A
Sbjct: 129 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 121 TGDCNEKCDVYSF 133
               + K DV++F
Sbjct: 186 YNKFSIKSDVWAF 198

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+G C       ++ E++ YG L D +   R+ N + V+  + L +A +I+  + YL 
Sbjct: 77  VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE 133
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + R++   N L  E  + K+ DF  S  +                +  PE +A
Sbjct: 134 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 121 TGDCNEKCDVYSF 133
               + K DV++F
Sbjct: 191 YNKFSIKSDVWAF 203

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 48  IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRV 107
           I  E+A  + Y H    + ++ R++KP N+L   +   K+ DF +S   P     +R + 
Sbjct: 128 IMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPS----LRRKT 180
Query: 108 M-GTFGYLPPEYIATGDCNEKCDVY 131
           M GT  YLPPE I     NEK D++
Sbjct: 181 MCGTLDYLPPEMIEGRMHNEKVDLW 205

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10  TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
           +E P+ +V EY+  G+L D +      + R P          + +A +IA G+AY+    
Sbjct: 83  SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQL--------VDMAAQIASGMAYVE--- 131
Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
               V R+++ +NIL  E  V K+ DF  +  I + E   R        +  PE    G 
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGR 191
Query: 124 CNEKCDVYSF 133
              K DV+SF
Sbjct: 192 FTIKSDVWSF 201

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 14/143 (9%)
Query: 1   MRLIGCCLETENPVLVF-EYVEYGTLADRIYHPRQPNFEP--------VTCSLRLKIAME 51
           + L+G C +   P++V  E+ ++G L+  +   R   F P        +T    +  + +
Sbjct: 94  VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKDLYKDFLTLEHLICYSFQ 152
Query: 52  IAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GRVMGT 110
           +A G+ +L    SR  + R++   NIL  E++V K+ DF  +  I +    +R G     
Sbjct: 153 VAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 209
Query: 111 FGYLPPEYIATGDCNEKCDVYSF 133
             ++ PE I       + DV+SF
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSF 232

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 13/123 (10%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LV E +  G L D+I   RQ  F     S  L     I   + YLH   S+ +V R++KP
Sbjct: 98  LVTELMRGGELLDKIL--RQKFFSEREASFVLHT---IGKTVEYLH---SQGVVHRDLKP 149
Query: 75  SNILFQEQS----VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDV 130
           SNIL+ ++S      ++ DF +++ +   E  +      T  ++ PE +     +E CD+
Sbjct: 150 SNILYVDESGNPECLRICDFGFAKQL-RAENGLLMTPCYTANFVAPEVLKRQGYDEGCDI 208
Query: 131 YSF 133
           +S 
Sbjct: 209 WSL 211

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 13/123 (10%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LV E +  G L D+I   RQ  F     S  L     I   + YLH   S+ +V R++KP
Sbjct: 98  LVTELMRGGELLDKIL--RQKFFSEREASFVLHT---IGKTVEYLH---SQGVVHRDLKP 149
Query: 75  SNILFQEQS----VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDV 130
           SNIL+ ++S      ++ DF +++ +   E  +      T  ++ PE +     +E CD+
Sbjct: 150 SNILYVDESGNPECLRICDFGFAKQL-RAENGLLMTPCYTANFVAPEVLKRQGYDEGCDI 208
Query: 131 YSF 133
           +S 
Sbjct: 209 WSL 211

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+G C       ++ E++ YG L D +   R+ N + V+  + L +A +I+  + YL 
Sbjct: 70  VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + R++   N L  E  + K+ DF  S  +                +  PE +A
Sbjct: 127 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLA 183
Query: 121 TGDCNEKCDVYSF 133
               + K DV++F
Sbjct: 184 YNKFSIKSDVWAF 196

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 1   MRLIGCCLETENPVLVF-EYVEYGTLADRIYHPRQPNFEP------------VTCSLRLK 47
           + L+G C +   P++V  E+ ++G L+  +   R   F P            +T    + 
Sbjct: 85  VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRN-EFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 48  IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GR 106
            + ++A G+ +L    SR  + R++   NIL  E++V K+ DF  +  I +    +R G 
Sbjct: 144 YSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
                 ++ PE I       + DV+SF
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSF 227

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+G C       ++ E++ YG L D +   R+ N + V   + L +A +I+  + YL 
Sbjct: 76  VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 132
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + R++   N L  E  + K+ DF  S  +                +  PE +A
Sbjct: 133 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 189
Query: 121 TGDCNEKCDVYSF 133
               + K DV++F
Sbjct: 190 YNKFSIKSDVWAF 202

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+G C       ++ E++ YG L D +   R+ N + V   + L +A +I+  + YL 
Sbjct: 72  VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + R++   N L  E  + K+ DF  S  +                +  PE +A
Sbjct: 129 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 121 TGDCNEKCDVYSF 133
               + K DV++F
Sbjct: 186 YNKFSIKSDVWAF 198

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 5   GCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
           GC L      LV EY   G+ +D +   ++P  + V  +     A++   G+AYLH   S
Sbjct: 82  GCYLREHTAWLVMEYC-LGSASDLLEVHKKP-LQEVEIAAVTHGALQ---GLAYLH---S 133
Query: 65  RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT--- 121
             ++ R+VK  NIL  E  + KL DF  +  +           +GT  ++ PE I     
Sbjct: 134 HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX-----FVGTPYWMAPEVILAMDE 188
Query: 122 GDCNEKCDVYSF 133
           G  + K DV+S 
Sbjct: 189 GQYDGKVDVWSL 200

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 5   GCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
           GC L      LV EY   G+ +D +   ++P  + V  +     A++   G+AYLH   S
Sbjct: 121 GCYLREHTAWLVMEYC-LGSASDLLEVHKKP-LQEVEIAAVTHGALQ---GLAYLH---S 172
Query: 65  RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT--- 121
             ++ R+VK  NIL  E  + KL DF  +  +      +     GT  ++ PE I     
Sbjct: 173 HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVILAMDE 227
Query: 122 GDCNEKCDVYSF 133
           G  + K DV+S 
Sbjct: 228 GQYDGKVDVWSL 239

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 142 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 191
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 192 XLCGTPEYLAPEIILSKGYNKAVDWWAL 219

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 1   MRLIGCCLETENPVLVF-EYVEYGTLADRIYHPRQPNFEP------------VTCSLRLK 47
           + L+G C +   P++V  E+ ++G L+  +   R   F P            +T    + 
Sbjct: 85  VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 48  IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GR 106
            + ++A G+ +L    SR  + R++   NIL  E++V K+ DF  +  I +    +R G 
Sbjct: 144 YSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
                 ++ PE I       + DV+SF
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSF 227

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 133 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 182
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 183 TLCGTPEYLAPEIILSKGYNKAVDWWAL 210

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 217
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 218 XLCGTPEYLAPEIILSKGYNKAVDWWAL 245

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+G C       ++ E++ YG L D +   R+ N + V   + L +A +I+  + YL 
Sbjct: 77  VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + R++   N L  E  + K+ DF  S  +                +  PE +A
Sbjct: 134 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 121 TGDCNEKCDVYSF 133
               + K DV++F
Sbjct: 191 YNKFSIKSDVWAF 203

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+G C       ++ E++ YG L D +   R+ N + V   + L +A +I+  + YL 
Sbjct: 74  VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + R++   N L  E  + K+ DF  S  +                +  PE +A
Sbjct: 131 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 187
Query: 121 TGDCNEKCDVYSF 133
               + K DV++F
Sbjct: 188 YNKFSIKSDVWAF 200

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 197
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 198 TLCGTPEYLAPEIILSKGYNKAVDWWAL 225

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 197
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWAL 225

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 197
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWAL 225

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 217
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 218 XLCGTPEYLAPEIILSKGYNKAVDWWAL 245

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+G C       ++ E++ YG L D +   R+ N + V   + L +A +I+  + YL 
Sbjct: 72  VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + R++   N L  E  + K+ DF  S  +                +  PE +A
Sbjct: 129 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 121 TGDCNEKCDVYSF 133
               + K DV++F
Sbjct: 186 YNKFSIKSDVWAF 198

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 197
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWAL 225

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 140 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 189
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 190 XLCGTPEYLAPEIILSKGYNKAVDWWAL 217

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 197
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWAL 225

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+G C       ++ E++ YG L D +   R+ N + V   + L +A +I+  + YL 
Sbjct: 77  VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + R++   N L  E  + K+ DF  S  +                +  PE +A
Sbjct: 134 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 121 TGDCNEKCDVYSF 133
               + K DV++F
Sbjct: 191 YNKFSIKSDVWAF 203

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 1   MRLIGCCLETENPVLVF-EYVEYGTLADRIYHPRQPNFEP------------VTCSLRLK 47
           + L+G C +   P++V  E+ ++G L+  +   R   F P            +T    + 
Sbjct: 94  VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 48  IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GR 106
            + ++A G+ +L    SR  + R++   NIL  E++V K+ DF  +  I +    +R G 
Sbjct: 153 YSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
                 ++ PE I       + DV+SF
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSF 236

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 197
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWAL 225

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 140 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 189
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 190 XLCGTPEYLAPEIILSKGYNKAVDWWAL 217

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 197
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWAL 225

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+G C       ++ E++ YG L D +   R+ N + V   + L +A +I+  + YL 
Sbjct: 74  VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + R++   N L  E  + K+ DF  S  +                +  PE +A
Sbjct: 131 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 187
Query: 121 TGDCNEKCDVYSF 133
               + K DV++F
Sbjct: 188 YNKFSIKSDVWAF 200

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+G C       ++ E++ YG L D +   R+ N + V   + L +A +I+  + YL 
Sbjct: 85  VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 141
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + R++   N L  E  + K+ DF  S  +                +  PE +A
Sbjct: 142 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 198
Query: 121 TGDCNEKCDVYSF 133
               + K DV++F
Sbjct: 199 YNKFSIKSDVWAF 211

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 9/139 (6%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE-----PVTCSLRLKIAMEIAYG 55
           + L+G C      +++ EY  YG L + +    + + +     P+     L  + ++A G
Sbjct: 105 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 164
Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRI-RGRVMGTFGYL 114
           +A+L    S+  + R+V   N+L     VAK+ DF  +  I      I +G       ++
Sbjct: 165 MAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 221
Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE I       + DV+S+
Sbjct: 222 APESIFDCVYTVQSDVWSY 240

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           +VFE V  G + +       P  +P++         ++  GI YLH    + I+ R++KP
Sbjct: 115 MVFELVNQGPVMEV------PTLKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKP 165
Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
           SN+L  E    K+ DF  S    +G   +    +GT  ++ PE ++
Sbjct: 166 SNLLVGEDGHIKIADFGVSNEF-KGSDALLSNTVGTPAFMAPESLS 210

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10  TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
           +E P+ +V EY+  G+L D +      + R P          + +A +IA G+AY+    
Sbjct: 83  SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQL--------VDMAAQIASGMAYVE--- 131
Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
               V R+++ +NIL  E  V K+ DF  +  I + E   R        +  PE    G 
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 124 CNEKCDVYSF 133
              K DV+SF
Sbjct: 192 FTIKSDVWSF 201

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 9/139 (6%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE-----PVTCSLRLKIAMEIAYG 55
           + L+G C      +++ EY  YG L + +    + + +     P+     L  + ++A G
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 172
Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRI-RGRVMGTFGYL 114
           +A+L    S+  + R+V   N+L     VAK+ DF  +  I      I +G       ++
Sbjct: 173 MAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 229
Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE I       + DV+S+
Sbjct: 230 APESIFDCVYTVQSDVWSY 248

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 15/145 (10%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNF-----------EPVTCSLRLKIA 49
           + L+G C      +++ EY  YG L + +   R P             E ++    L  +
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFS 172
Query: 50  MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRI-RGRVM 108
            ++A G+A+L    S+  + R+V   N+L     VAK+ DF  +  I      I +G   
Sbjct: 173 SQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 229
Query: 109 GTFGYLPPEYIATGDCNEKCDVYSF 133
               ++ PE I       + DV+S+
Sbjct: 230 LPVKWMAPESIFDCVYTVQSDVWSY 254

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 21/131 (16%)
Query: 17  FEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSN 76
            EY E GTL D I H    N +        ++  +I   ++Y+H   S+ I+ R++KP N
Sbjct: 94  MEYCENGTLYDLI-HSENLNQQRDEY---WRLFRQILEALSYIH---SQGIIHRDLKPMN 146
Query: 77  ILFQEQSVAKLFDFSYSESIPE-------------GETRIRGRVMGTFGYLPPEYI-ATG 122
           I   E    K+ DF  ++++               G +      +GT  Y+  E +  TG
Sbjct: 147 IFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTG 206
Query: 123 DCNEKCDVYSF 133
             NEK D+YS 
Sbjct: 207 HYNEKIDMYSL 217

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10  TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
           +E P+ +V EY+  G+L D +      + R P          + +A +IA G+AY+    
Sbjct: 73  SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQL--------VDMAAQIASGMAYVE--- 121
Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
               V R+++ +NIL  E  V K+ DF  +  I + E   R        +  PE    G 
Sbjct: 122 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGR 181
Query: 124 CNEKCDVYSF 133
              K DV+SF
Sbjct: 182 FTIKSDVWSF 191

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL       E   ++ EY+  G+L D +   +      V     +  + +IA G+AY+ 
Sbjct: 71  VRLYAVVTREEPIYIITEYMAKGSLLDFL---KSDEGGKVLLPKLIDFSAQIAEGMAYIE 127
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + R+++ +N+L  E  + K+ DF  +  I + E   R        +  PE I 
Sbjct: 128 ---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN 184
Query: 121 TGDCNEKCDVYSF 133
            G    K DV+SF
Sbjct: 185 FGCFTIKSDVWSF 197

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM---EIAYGIAYLHVAFSRPIVFRN 71
           +V EY+  G+L D +           TC    +IA    E    + +LH   S  ++ R+
Sbjct: 94  VVMEYLAGGSLTDVVTE---------TCMDEGQIAAVCRECLQALEFLH---SNQVIHRD 141
Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
           +K  NIL       KL DF +   I   +++ R  ++GT  ++ PE +       K D++
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSEMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 132 SF 133
           S 
Sbjct: 201 SL 202

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 9/134 (6%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL+G C    +  LV +Y+  G+L D +   R      +   L L   ++IA G+ YL 
Sbjct: 78  VRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGA----LGPQLLLNWGVQIAKGMYYLE 132
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GRVMGTFGYLPPEYI 119
                 +V RN+   N+L +  S  ++ DF  ++ +P  + ++          ++  E I
Sbjct: 133 ---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 189
Query: 120 ATGDCNEKCDVYSF 133
             G    + DV+S+
Sbjct: 190 HFGKYTHQSDVWSY 203

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 14/78 (17%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF----SYSESIPEGETRIR 104
           A EI  G+ ++H  F   +V+R++KP+NIL  E    ++ D      +S+  P       
Sbjct: 297 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 349
Query: 105 GRVMGTFGYLPPEYIATG 122
              +GT GY+ PE +  G
Sbjct: 350 ---VGTHGYMAPEVLQKG 364

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 9/134 (6%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL+G C    +  LV +Y+  G+L D +   R      +   L L   ++IA G+ YL 
Sbjct: 96  VRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGA----LGPQLLLNWGVQIAKGMYYLE 150
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GRVMGTFGYLPPEYI 119
                 +V RN+   N+L +  S  ++ DF  ++ +P  + ++          ++  E I
Sbjct: 151 ---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 207
Query: 120 ATGDCNEKCDVYSF 133
             G    + DV+S+
Sbjct: 208 HFGKYTHQSDVWSY 221

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 14/78 (17%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF----SYSESIPEGETRIR 104
           A EI  G+ ++H  F   +V+R++KP+NIL  E    ++ D      +S+  P       
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 350
Query: 105 GRVMGTFGYLPPEYIATG 122
              +GT GY+ PE +  G
Sbjct: 351 ---VGTHGYMAPEVLQKG 365

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 14/78 (17%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF----SYSESIPEGETRIR 104
           A EI  G+ ++H  F   +V+R++KP+NIL  E    ++ D      +S+  P       
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 350
Query: 105 GRVMGTFGYLPPEYIATG 122
              +GT GY+ PE +  G
Sbjct: 351 ---VGTHGYMAPEVLQKG 365

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 14/78 (17%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF----SYSESIPEGETRIR 104
           A EI  G+ ++H  F   +V+R++KP+NIL  E    ++ D      +S+  P       
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 350
Query: 105 GRVMGTFGYLPPEYIATG 122
              +GT GY+ PE +  G
Sbjct: 351 ---VGTHGYMAPEVLQKG 365

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N++  +Q   ++ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM---EIAYGIAYLHVAFSRPIVFRN 71
           +V EY+  G+L D +           TC    +IA    E    + +LH   S  ++ R+
Sbjct: 94  VVMEYLAGGSLTDVVTE---------TCMDEGQIAAVCRECLQALEFLH---SNQVIHRD 141
Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
           +K  NIL       KL DF +   I   +++ R  ++GT  ++ PE +       K D++
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSTMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 132 SF 133
           S 
Sbjct: 201 SL 202

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 1   MRLIGCCLETENPVLVF-EYVEYGTLADRIYHPRQPNFEP------------VTCSLRLK 47
           + L+G C +   P++V  E+ ++G L+  +   R   F P            +T    + 
Sbjct: 94  VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 48  IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GR 106
            + ++A G+ +L    SR  + R++   NIL  E++V K+ DF  +  I +    +R G 
Sbjct: 153 YSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD 209
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
                 ++ PE I       + DV+SF
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSF 236

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
Query: 8   LETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI 67
           +  +N  +V ++ E  +L   + H ++  F+       + IA + A G+ YLH   ++ I
Sbjct: 101 MTKDNLAIVTQWCEGSSLYKHL-HVQETKFQMFQL---IDIARQTAQGMDYLH---AKNI 153
Query: 68  VFRNVKPSNILFQEQSVAKLFDFSYS--ESIPEGETRIRGRVMGTFGYLPPEYIATGDCN 125
           + R++K +NI   E    K+ DF  +  +S   G  ++  +  G+  ++ PE I   D N
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE-QPTGSVLWMAPEVIRMQDNN 212
Query: 126 E---KCDVYSF 133
               + DVYS+
Sbjct: 213 PFSFQSDVYSY 223

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 2/120 (1%)
Query: 15  LVFEYVEYGTLADRIYH-PRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
           +V EY E G LA  I    ++  +      LR+   + +A    +        ++ R++K
Sbjct: 84  IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 74  PSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
           P+N+    +   KL DF  +  I   +T      +GT  Y+ PE +     NEK D++S 
Sbjct: 144 PANVFLDGKQNVKLGDFGLAR-ILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSL 202

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N++  +Q   K+ DF  ++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10  TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
           +E P+ +V EY+  G+L D +      + R P          + +A +IA G+AY+    
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL--------VDMAAQIASGMAYVE--- 297
Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
               V R+++ +NIL  E  V K+ DF  +  I + E   R        +  PE    G 
Sbjct: 298 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 357
Query: 124 CNEKCDVYSF 133
              K DV+SF
Sbjct: 358 FTIKSDVWSF 367

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 14  VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
            +V ++ E  +L   + H  +  FE +     + IA + A G+ YLH   ++ I+ R++K
Sbjct: 107 AIVTQWCEGSSLYHHL-HIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHRDLK 159
Query: 74  PSNILFQEQSVAKLFDFSYSESIPEGETRIRG-----RVMGTFGYLPPEYIATGDCNE-- 126
            +NI   E    K+ DF  +      ++R  G     ++ G+  ++ PE I   D N   
Sbjct: 160 SNNIFLHEDLTVKIGDFGLATE----KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 215
Query: 127 -KCDVYSF 133
            + DVY+F
Sbjct: 216 FQSDVYAF 223

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 10  TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
           +E P+ +V EY+  G L D +      + R P          + +A +IA G+AY+    
Sbjct: 83  SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQL--------VDMAAQIASGMAYVE--- 131
Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
               V R+++ +NIL  E  V K+ DF  +  I + E   R        +  PE    G 
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 124 CNEKCDVYSF 133
              K DV+SF
Sbjct: 192 FTIKSDVWSF 201

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM---EIAYGIAYLHVAFSRPIVFRN 71
           +V EY+  G+L D +           TC    +IA    E    + +LH   S  ++ R+
Sbjct: 94  VVMEYLAGGSLTDVVTE---------TCMDEGQIAAVCRECLQALEFLH---SNQVIHRD 141
Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
           +K  NIL       KL DF +   I   +++ R  ++GT  ++ PE +       K D++
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSXMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 132 SF 133
           S 
Sbjct: 201 SL 202

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM---EIAYGIAYLHVAFSRPIVFRN 71
           +V EY+  G+L D +           TC    +IA    E    + +LH   S  ++ R+
Sbjct: 95  VVMEYLAGGSLTDVVTE---------TCMDEGQIAAVCRECLQALEFLH---SNQVIHRD 142
Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
           +K  NIL       KL DF +   I   +++ R  ++GT  ++ PE +       K D++
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSXMVGTPYWMAPEVVTRKAYGPKVDIW 201
Query: 132 SF 133
           S 
Sbjct: 202 SL 203

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10  TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
           +E P+ +V EY+  G+L D +      + R P          + +A +IA G+AY+    
Sbjct: 83  SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL--------VDMAAQIASGMAYVE--- 131
Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
               V R+++ +NIL  E  V K+ DF  +  I + E   R        +  PE    G 
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 124 CNEKCDVYSF 133
              K DV+SF
Sbjct: 192 FTIKSDVWSF 201

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LV E +  G L +RI   ++ +F     S    I  ++   ++++H      +V R++KP
Sbjct: 83  LVMELLNGGELFERI--KKKKHFSETEASY---IMRKLVSAVSHMH---DVGVVHRDLKP 134
Query: 75  SNILFQEQS---VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
            N+LF +++     K+ DF ++   P     ++     T  Y  PE +     +E CD++
Sbjct: 135 ENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQNGYDESCDLW 193
Query: 132 SFDGSRDSGHLTGRAWYRSED 152
           S  G      L+G+  ++S D
Sbjct: 194 SL-GVILYTMLSGQVPFQSHD 213

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10  TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
           +E P+ +V EY+  G+L D +      + R P          + +A +IA G+AY+    
Sbjct: 83  SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL--------VDMAAQIASGMAYVE--- 131
Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
               V R+++ +NIL  E  V K+ DF  +  I + E   R        +  PE    G 
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 124 CNEKCDVYSF 133
              K DV+SF
Sbjct: 192 FTIKSDVWSF 201

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10  TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
           +E P+ +V EY+  G+L D +      + R P          + +A +IA G+AY+    
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL--------VDMAAQIASGMAYVE--- 297
Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
               V R+++ +NIL  E  V K+ DF  +  I + E   R        +  PE    G 
Sbjct: 298 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 357
Query: 124 CNEKCDVYSF 133
              K DV+SF
Sbjct: 358 FTIKSDVWSF 367

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 14  VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
            +V ++ E  +L   + H  +  FE +     + IA + A G+ YLH   ++ I+ R++K
Sbjct: 99  AIVTQWCEGSSLYHHL-HIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHRDLK 151
Query: 74  PSNILFQEQSVAKLFDFSYSESIPEGETRIRG-----RVMGTFGYLPPEYIATGDCNE-- 126
            +NI   E    K+ DF  +      ++R  G     ++ G+  ++ PE I   D N   
Sbjct: 152 SNNIFLHEDLTVKIGDFGLATE----KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 207
Query: 127 -KCDVYSF 133
            + DVY+F
Sbjct: 208 FQSDVYAF 215

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 2/120 (1%)
Query: 15  LVFEYVEYGTLADRIYH-PRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
           +V EY E G LA  I    ++  +      LR+   + +A    +        ++ R++K
Sbjct: 84  IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 74  PSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
           P+N+    +   KL DF  +  I   +T      +GT  Y+ PE +     NEK D++S 
Sbjct: 144 PANVFLDGKQNVKLGDFGLAR-ILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSL 202

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N++  +Q   ++ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIIISKGYNKAVDWWAL 224

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 69/154 (44%), Gaps = 16/154 (10%)
Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPN--FEPVTCSLRLKIAMEIAYGIAYL 59
           +L  C    +    V EYV  G L   +YH +Q     EP         A EIA G+ +L
Sbjct: 85  QLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGRFKEPHAVFY----AAEIAIGLFFL 137
Query: 60  HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMGTFGYLPPEY 118
               S+ I++R++K  N++   +   K+ DF    E+I +G T       GT  Y+ PE 
Sbjct: 138 Q---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIAPEI 192
Query: 119 IATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
           IA     +  D ++F G      L G+A +  ED
Sbjct: 193 IAYQPYGKSVDWWAF-GVLLYEMLAGQAPFEGED 225

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
           EI   + YLH    + I+ R++KP NIL  E    ++ DF  ++ + PE +       +G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 196
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
           T  Y+ PE +     ++  D+++ 
Sbjct: 197 TAQYVSPELLTEKSASKSSDLWAL 220

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 32/152 (21%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEP-----------VTCSLRLKIA 49
           + L+G C       L  EY  +G L D +   R    +P           ++    L  A
Sbjct: 89  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 50  MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR--- 106
            ++A G+ YL     +  + R++   NIL  E  VAK+ DF  S          RG+   
Sbjct: 149 ADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLS----------RGQEVY 195
Query: 107 VMGTFGYLPPEYIATGDCN-----EKCDVYSF 133
           V  T G LP  ++A    N        DV+S+
Sbjct: 196 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY 227

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10  TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
           +E P+ +V EY+  G+L D +      + R P          + +A +IA G+AY+    
Sbjct: 83  SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQL--------VDMAAQIASGMAYVE--- 131
Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
               V R+++ +NIL  E  V K+ DF  +  I + E   R        +  PE    G 
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 124 CNEKCDVYSF 133
              K DV+SF
Sbjct: 192 FTIKSDVWSF 201

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10  TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
           +E P+ +V EY+  G+L D +      + R P          + +A +IA G+AY+    
Sbjct: 74  SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL--------VDMAAQIASGMAYVE--- 122
Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
               V R+++ +NIL  E  V K+ DF  +  I + E   R        +  PE    G 
Sbjct: 123 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 182
Query: 124 CNEKCDVYSF 133
              K DV+SF
Sbjct: 183 FTIKSDVWSF 192

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10  TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
           +E P+ +V EY+  G+L D +      + R P          + +A +IA G+AY+    
Sbjct: 76  SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL--------VDMAAQIASGMAYVE--- 124
Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
               V R+++ +NIL  E  V K+ DF  +  I + E   R        +  PE    G 
Sbjct: 125 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 184
Query: 124 CNEKCDVYSF 133
              K DV+SF
Sbjct: 185 FTIKSDVWSF 194

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10  TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
           +E P+ +V EY+  G+L D +      + R P          + +A +IA G+AY+    
Sbjct: 72  SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL--------VDMAAQIASGMAYVE--- 120
Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
               V R+++ +NIL  E  V K+ DF  +  I + E   R        +  PE    G 
Sbjct: 121 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 180
Query: 124 CNEKCDVYSF 133
              K DV+SF
Sbjct: 181 FTIKSDVWSF 190

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 19/127 (14%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           +V ++ E  +L   + H  +  FE +     + IA + A G+ YLH   ++ I+ R++K 
Sbjct: 80  IVTQWCEGSSLYHHL-HIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHRDLKS 132
Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRG-----RVMGTFGYLPPEYIATGDCNE--- 126
           +NI   E    K+ DF  +      ++R  G     ++ G+  ++ PE I   D N    
Sbjct: 133 NNIFLHEDLTVKIGDFGLATE----KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 127 KCDVYSF 133
           + DVY+F
Sbjct: 189 QSDVYAF 195

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 13/125 (10%)
Query: 14  VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
            +V ++ E  +L   + H  +  FE +     + IA + A G+ YLH   ++ I+ R++K
Sbjct: 107 AIVTQWCEGSSLYHHL-HIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHRDLK 159
Query: 74  PSNILFQEQSVAKLFDFSYS--ESIPEGETRIRGRVMGTFGYLPPEYIATGDCNE---KC 128
            +NI   E    K+ DF  +  +S   G  +   ++ G+  ++ PE I   D N    + 
Sbjct: 160 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQDKNPYSFQS 218
Query: 129 DVYSF 133
           DVY+F
Sbjct: 219 DVYAF 223

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLR--LKIAMEIAYGIAYLHVAFSRPIVFRNV 72
           LVF+ ++ G L D +        E VT S +   KI   +   I  LH      IV R++
Sbjct: 101 LVFDLMKKGELFDYLT-------EKVTLSEKETRKIMRALLEVICALH---KLNIVHRDL 150
Query: 73  KPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
           KP NIL  +    KL DF +S  +  GE ++R  V GT  YL PE I
Sbjct: 151 KPENILLDDDMNIKLTDFGFSCQLDPGE-KLRS-VCGTPSYLAPEII 195

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 13/125 (10%)
Query: 14  VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
            +V ++ E  +L   + H  +  FE +     + IA + A G+ YLH   ++ I+ R++K
Sbjct: 106 AIVTQWCEGSSLYHHL-HIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHRDLK 158
Query: 74  PSNILFQEQSVAKLFDFSYS--ESIPEGETRIRGRVMGTFGYLPPEYIATGDCNE---KC 128
            +NI   E    K+ DF  +  +S   G  +   ++ G+  ++ PE I   D N    + 
Sbjct: 159 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQDKNPYSFQS 217
Query: 129 DVYSF 133
           DVY+F
Sbjct: 218 DVYAF 222

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLR--LKIAMEIAYGIAYLHVAFSRPIVFRNV 72
           LVF+ ++ G L D +        E VT S +   KI   +   I  LH      IV R++
Sbjct: 101 LVFDLMKKGELFDYLT-------EKVTLSEKETRKIMRALLEVICALH---KLNIVHRDL 150
Query: 73  KPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
           KP NIL  +    KL DF +S  +  GE ++R  V GT  YL PE I
Sbjct: 151 KPENILLDDDMNIKLTDFGFSCQLDPGE-KLR-EVCGTPSYLAPEII 195

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 1   MRLIGCCLETENPVLVF-EYVEYGTLADRIYHPRQPNFEP------------VTCSLRLK 47
           + L+G C +   P++V  E+ ++G L+  +   R   F P            +T    + 
Sbjct: 85  VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRN-EFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 48  IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GR 106
            + ++A G+ +L    SR  + R++   NIL  E++V K+ DF  +  I +    +R G 
Sbjct: 144 YSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
                 ++ PE I       + DV+SF
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSF 227

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 32/152 (21%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEP-----------VTCSLRLKIA 49
           + L+G C       L  EY  +G L D +   R    +P           ++    L  A
Sbjct: 79  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 50  MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR--- 106
            ++A G+ YL     +  + R++   NIL  E  VAK+ DF  S          RG+   
Sbjct: 139 ADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLS----------RGQEVY 185
Query: 107 VMGTFGYLPPEYIATGDCN-----EKCDVYSF 133
           V  T G LP  ++A    N        DV+S+
Sbjct: 186 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY 217

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+G C       ++ E++ YG L D +   R+ N + V   + L +A +I+  + YL 
Sbjct: 74  VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + R++   N L  E  + K+ DF  S  +                +  PE +A
Sbjct: 131 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLA 187
Query: 121 TGDCNEKCDVYSF 133
               + K DV++F
Sbjct: 188 YNKFSIKSDVWAF 200

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 13/124 (10%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           +V ++ E  +L   + H  +  FE +     + IA + A G+ YLH   ++ I+ R++K 
Sbjct: 85  IVTQWCEGSSLYHHL-HIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHRDLKS 137
Query: 75  SNILFQEQSVAKLFDFSYS--ESIPEGETRIRGRVMGTFGYLPPEYIATGDCNE---KCD 129
           +NI   E    K+ DF  +  +S   G  +   ++ G+  ++ PE I   D N    + D
Sbjct: 138 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQDKNPYSFQSD 196
Query: 130 VYSF 133
           VY+F
Sbjct: 197 VYAF 200

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 1   MRLIGCCLETENPVLVF-EYVEYGTLADRIYHPRQPNFEP------------VTCSLRLK 47
           + L+G C +   P++V  E+ ++G L+  +   R   F P            +T    + 
Sbjct: 85  VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRN-EFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 48  IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GR 106
            + ++A G+ +L    SR  + R++   NIL  E++V K+ DF  +  I +    +R G 
Sbjct: 144 YSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
                 ++ PE I       + DV+SF
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSF 227

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 13/124 (10%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           +V ++ E  +L   + H  +  FE +     + IA + A G+ YLH   ++ I+ R++K 
Sbjct: 85  IVTQWCEGSSLYHHL-HIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHRDLKS 137
Query: 75  SNILFQEQSVAKLFDFSYS--ESIPEGETRIRGRVMGTFGYLPPEYIATGDCNE---KCD 129
           +NI   E    K+ DF  +  +S   G  +   ++ G+  ++ PE I   D N    + D
Sbjct: 138 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQDKNPYSFQSD 196
Query: 130 VYSF 133
           VY+F
Sbjct: 197 VYAF 200

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 38  EPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIP 97
           EP+T    +  + ++A G+ +L    SR  + R++   NIL  E +V K+ DF  +  I 
Sbjct: 194 EPITMEDLISYSFQVARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIY 250
Query: 98  EGETRIR-GRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
           +    +R G       ++ PE I     + K DV+S+
Sbjct: 251 KNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSY 287

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+G C       ++ E++ YG L D +   R+ N + V   + L +A +I+  + YL 
Sbjct: 73  VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + R++   N L  E  + K+ DF  S  +                +  PE +A
Sbjct: 130 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLA 186
Query: 121 TGDCNEKCDVYSF 133
               + K DV++F
Sbjct: 187 YNKFSIKSDVWAF 199

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 1   MRLIGCCLETENPVLVF-EYVEYGTLADRIYHPRQPNFEP------------VTCSLRLK 47
           + L+G C +   P++V  E+ ++G L+  +   R   F P            +T    + 
Sbjct: 94  VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 48  IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GR 106
            + ++A G+ +L    SR  + R++   NIL  E++V K+ DF  +  I +    +R G 
Sbjct: 153 YSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 209
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
                 ++ PE I       + DV+SF
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSF 236

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLR--LKIAMEIAYGIAYLHVAFSRPIVFRNV 72
           LVF+ ++ G L D +        E VT S +   KI   +   I  LH      IV R++
Sbjct: 88  LVFDLMKKGELFDYLT-------EKVTLSEKETRKIMRALLEVICALH---KLNIVHRDL 137
Query: 73  KPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
           KP NIL  +    KL DF +S  +  GE ++R  V GT  YL PE I
Sbjct: 138 KPENILLDDDMNIKLTDFGFSCQLDPGE-KLR-EVCGTPSYLAPEII 182

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10  TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
           +E P+ +V EY+  G+L D +      + R P          + +A +IA G+AY+    
Sbjct: 249 SEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQL--------VDMAAQIASGMAYVE--- 297
Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
               V R+++ +NIL  E  V K+ DF  +  I + E   R        +  PE    G 
Sbjct: 298 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 357
Query: 124 CNEKCDVYSF 133
              K DV+SF
Sbjct: 358 FTIKSDVWSF 367

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 13/124 (10%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           +V ++ E  +L   + H  +  FE +     + IA + A G+ YLH   ++ I+ R++K 
Sbjct: 82  IVTQWCEGSSLYHHL-HIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHRDLKS 134
Query: 75  SNILFQEQSVAKLFDFSYS--ESIPEGETRIRGRVMGTFGYLPPEYIATGDCNE---KCD 129
           +NI   E    K+ DF  +  +S   G  +   ++ G+  ++ PE I   D N    + D
Sbjct: 135 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQDKNPYSFQSD 193
Query: 130 VYSF 133
           VY+F
Sbjct: 194 VYAF 197

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 1   MRLIGCCLETENPVLVF-EYVEYGTLADRIYHPRQPNFEP------------VTCSLRLK 47
           + L+G C +   P++V  E+ ++G L+  +   R   F P            +T    + 
Sbjct: 131 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKVAPEDLYKDFLTLEHLIC 189
Query: 48  IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GR 106
            + ++A G+ +L    SR  + R++   NIL  E++V K+ DF  +  I +    +R G 
Sbjct: 190 YSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 246
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
                 ++ PE I       + DV+SF
Sbjct: 247 ARLPLKWMAPETIFDRVYTIQSDVWSF 273

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 47  KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR 106
           K+++ +  G+AYL       I+ R+VKPSNIL   +   KL DF  S  + +    +   
Sbjct: 118 KVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 172
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
            +GT  Y+ PE +     + + D++S 
Sbjct: 173 FVGTRSYMAPERLQGTHYSVQSDIWSM 199

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 13/124 (10%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           +V ++ E  +L   + H  +  FE +     + IA + A G+ YLH   ++ I+ R++K 
Sbjct: 80  IVTQWCEGSSLYHHL-HIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHRDLKS 132
Query: 75  SNILFQEQSVAKLFDFSYS--ESIPEGETRIRGRVMGTFGYLPPEYIATGDCNE---KCD 129
           +NI   E    K+ DF  +  +S   G  +   ++ G+  ++ PE I   D N    + D
Sbjct: 133 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 130 VYSF 133
           VY+F
Sbjct: 192 VYAF 195

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 13/124 (10%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           +V ++ E  +L   + H  +  FE +     + IA + A G+ YLH   ++ I+ R++K 
Sbjct: 80  IVTQWCEGSSLYHHL-HIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHRDLKS 132
Query: 75  SNILFQEQSVAKLFDFSYS--ESIPEGETRIRGRVMGTFGYLPPEYIATGDCNE---KCD 129
           +NI   E    K+ DF  +  +S   G  +   ++ G+  ++ PE I   D N    + D
Sbjct: 133 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 130 VYSF 133
           VY+F
Sbjct: 192 VYAF 195

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 1   MRLIGCCLETENPVLVF-EYVEYGTLADRIYHPRQPNFEP------------VTCSLRLK 47
           + L+G C +   P++V  E+ ++G L+  +   R   F P            +T    + 
Sbjct: 96  VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKEAPEDLYKDFLTLEHLIC 154
Query: 48  IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GR 106
            + ++A G+ +L    SR  + R++   NIL  E++V K+ DF  +  I +    +R G 
Sbjct: 155 YSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 211
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
                 ++ PE I       + DV+SF
Sbjct: 212 ARLPLKWMAPETIFDRVYTIQSDVWSF 238

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 10  TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
           +E P+ +V EY+  G+L D +   +    + +     + +A +IA G+AY+        V
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 385
Query: 69  FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
            R+++ +NIL  E  V K+ DF  +  I + E   R        +  PE    G    K 
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 445
Query: 129 DVYSF 133
           DV+SF
Sbjct: 446 DVWSF 450

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 10  TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
           +E P+ +V EY+  G+L D +      + R P          + +A +IA G+AY+    
Sbjct: 250 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL--------VDMAAQIASGMAYVE--- 298
Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
               V R+++ +NIL  E  V K+ DF     I + E   R        +  PE    G 
Sbjct: 299 RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGR 358
Query: 124 CNEKCDVYSF 133
              K DV+SF
Sbjct: 359 FTIKSDVWSF 368

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RLIG C + E  +LV E    G L   +   R    E +  S   ++  +++ G+ YL 
Sbjct: 399 VRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLE 453
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPEY 118
               +  V RN+   N+L   +  AK+ DF  S+++   ++    R  G +   +  PE 
Sbjct: 454 ---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC 510
Query: 119 IATGDCNEKCDVYSF 133
           I     + + DV+S+
Sbjct: 511 INFRKFSSRSDVWSY 525

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G  L T    +V E    G+L DR+    Q +F   T S   + A+++A G+ YL 
Sbjct: 78  IRLYGVVL-TPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLS---RYAVQVAEGMGYLE 132
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEY 118
              S+  + R++   N+L   + + K+ DF    ++P+ +    ++      F +  PE 
Sbjct: 133 ---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 189
Query: 119 IATGDCNEKCDVYSF 133
           + T   +   D + F
Sbjct: 190 LKTRTFSHASDTWMF 204

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 14/107 (13%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLR--LKIAMEIAYGIAYLHVAFSRPIVFRNV 72
           LVF+ +  G L D +        E V  S +    I   +   +++LH   +  IV R++
Sbjct: 177 LVFDLMRKGELFDYLT-------EKVALSEKETRSIMRSLLEAVSFLH---ANNIVHRDL 226
Query: 73  KPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
           KP NIL  +    +L DF +S  +  GE ++R  + GT GYL PE +
Sbjct: 227 KPENILLDDNMQIRLSDFGFSCHLEPGE-KLR-ELCGTPGYLAPEIL 271

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 12/116 (10%)
Query: 23  GTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQ 82
           GT A+++    Q    P+   +  K+ + I   + YL       ++ R+VKPSNIL  E+
Sbjct: 107 GTCAEKLKKRMQG---PIPERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDER 161
Query: 83  SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNE-----KCDVYSF 133
              KL DF  S  +   + + + R  G   Y+ PE I   D  +     + DV+S 
Sbjct: 162 GQIKLCDFGISGRLV--DDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSL 215

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G  L T    +V E    G+L DR+    Q +F   T S   + A+++A G+ YL 
Sbjct: 74  IRLYGVVL-TPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLS---RYAVQVAEGMGYLE 128
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEY 118
              S+  + R++   N+L   + + K+ DF    ++P+ +    ++      F +  PE 
Sbjct: 129 ---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 185
Query: 119 IATGDCNEKCDVYSF 133
           + T   +   D + F
Sbjct: 186 LKTRTFSHASDTWMF 200

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G  L T    +V E    G+L DR+    Q +F   T S   + A+++A G+ YL 
Sbjct: 74  IRLYGVVL-TPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLS---RYAVQVAEGMGYLE 128
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEY 118
              S+  + R++   N+L   + + K+ DF    ++P+ +    ++      F +  PE 
Sbjct: 129 ---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES 185
Query: 119 IATGDCNEKCDVYSF 133
           + T   +   D + F
Sbjct: 186 LKTRTFSHASDTWMF 200

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
           EI   + YLH    + I+ R++KP NIL  E    ++ DF  ++ + PE +       +G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
           T  Y+ PE +      +  D+++ 
Sbjct: 197 TAQYVSPELLTEKSAXKSSDLWAL 220

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G  L T    +V E    G+L DR+    Q +F   T S   + A+++A G+ YL 
Sbjct: 74  IRLYGVVL-TPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLS---RYAVQVAEGMGYLE 128
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEY 118
              S+  + R++   N+L   + + K+ DF    ++P+ +    ++      F +  PE 
Sbjct: 129 ---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 185
Query: 119 IATGDCNEKCDVYSF 133
           + T   +   D + F
Sbjct: 186 LKTRTFSHASDTWMF 200

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G  L T    +V E    G+L DR+    Q +F   T S   + A+++A G+ YL 
Sbjct: 78  IRLYGVVL-TPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLS---RYAVQVAEGMGYLE 132
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEY 118
              S+  + R++   N+L   + + K+ DF    ++P+ +    ++      F +  PE 
Sbjct: 133 ---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 189
Query: 119 IATGDCNEKCDVYSF 133
           + T   +   D + F
Sbjct: 190 LKTRTFSHASDTWMF 204

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G  L T    +V E    G+L DR+    Q +F   T S   + A+++A G+ YL 
Sbjct: 84  IRLYGVVL-TPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLS---RYAVQVAEGMGYLE 138
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEY 118
              S+  + R++   N+L   + + K+ DF    ++P+ +    ++      F +  PE 
Sbjct: 139 ---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES 195
Query: 119 IATGDCNEKCDVYSF 133
           + T   +   D + F
Sbjct: 196 LKTRTFSHASDTWMF 210

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 22/134 (16%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF----SRP-IVF 69
           L+  Y E G+L D +   +    + V+C   L+I + IA G+A+LH+       +P I  
Sbjct: 112 LITHYHEMGSLYDYL---QLTTLDTVSC---LRIVLSIASGLAHLHIEIFGTQGKPAIAH 165
Query: 70  RNVKPSNILFQEQSVAKLFDFS----YSESIPEGETRIRGRVMGTFGYLPPEYIATG--- 122
           R++K  NIL ++     + D      +S+S  + +     RV GT  Y+ PE +      
Sbjct: 166 RDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAPEVLDETIQV 224
Query: 123 ---DCNEKCDVYSF 133
              D  ++ D+++F
Sbjct: 225 DCFDSYKRVDIWAF 238

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           +V EY   G+++D I   R         +  L+  ++   G+ YLH  F R I  R++K 
Sbjct: 101 IVMEYCGAGSVSD-IIRLRNKTLTEDEIATILQSTLK---GLEYLH--FMRKI-HRDIKA 153
Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
            NIL   +  AKL DF  +  + +   + R  V+GT  ++ PE I     N   D++S 
Sbjct: 154 GNILLNTEGHAKLADFGVAGQLTDXMAK-RNXVIGTPFWMAPEVIQEIGYNCVADIWSL 211

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 2/120 (1%)
Query: 15  LVFEYVEYGTLADRIYH-PRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
           +V EY E G LA  I    ++  +      LR+   + +A    +        ++ R++K
Sbjct: 84  IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 74  PSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
           P+N+    +   KL DF  +  +   E   +   +GT  Y+ PE +     NEK D++S 
Sbjct: 144 PANVFLDGKQNVKLGDFGLARILNHDEDFAK-EFVGTPYYMSPEQMNRMSYNEKSDIWSL 202

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G  L T    +V E    G+L DR+    Q +F   T S   + A+++A G+ YL 
Sbjct: 84  IRLYGVVL-TPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLS---RYAVQVAEGMGYLE 138
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEY 118
              S+  + R++   N+L   + + K+ DF    ++P+ +    ++      F +  PE 
Sbjct: 139 ---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 195
Query: 119 IATGDCNEKCDVYSF 133
           + T   +   D + F
Sbjct: 196 LKTRTFSHASDTWMF 210

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 22/134 (16%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF----SRP-IVF 69
           L+  Y E G+L D +   +    + V+C   L+I + IA G+A+LH+       +P I  
Sbjct: 83  LITHYHEMGSLYDYL---QLTTLDTVSC---LRIVLSIASGLAHLHIEIFGTQGKPAIAH 136
Query: 70  RNVKPSNILFQEQSVAKLFDFS----YSESIPEGETRIRGRVMGTFGYLPPEYIATG--- 122
           R++K  NIL ++     + D      +S+S  + +     RV GT  Y+ PE +      
Sbjct: 137 RDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAPEVLDETIQV 195
Query: 123 ---DCNEKCDVYSF 133
              D  ++ D+++F
Sbjct: 196 DCFDSYKRVDIWAF 209

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 10  TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
           +E P+ +V EY+  G L D +      + R P          + +A +IA G+AY+    
Sbjct: 83  SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQL--------VDMAAQIASGMAYVE--- 131
Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
               V R+++ +NIL  E  V K+ DF  +  I + E   R        +  PE    G 
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 124 CNEKCDVYSF 133
              K DV+SF
Sbjct: 192 FTIKSDVWSF 201

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 22/134 (16%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF----SRP-IVF 69
           L+  Y E G+L D +   +    + V+C   L+I + IA G+A+LH+       +P I  
Sbjct: 83  LITHYHEMGSLYDYL---QLTTLDTVSC---LRIVLSIASGLAHLHIEIFGTQGKPAIAH 136
Query: 70  RNVKPSNILFQEQSVAKLFDFS----YSESIPEGETRIRGRVMGTFGYLPPEYIATG--- 122
           R++K  NIL ++     + D      +S+S  + +     RV GT  Y+ PE +      
Sbjct: 137 RDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAPEVLDETIQV 195
Query: 123 ---DCNEKCDVYSF 133
              D  ++ D+++F
Sbjct: 196 DCFDSYKRVDIWAF 209

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10  TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
           +E P+ +V EY+  G+L D +      + R P          + ++ +IA G+AY+    
Sbjct: 80  SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQL--------VDMSAQIASGMAYVE--- 128
Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
               V R+++ +NIL  E  V K+ DF  +  I + E   R        +  PE    G 
Sbjct: 129 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGR 188
Query: 124 CNEKCDVYSF 133
              K DV+SF
Sbjct: 189 FTIKSDVWSF 198

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 16/154 (10%)
Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPN--FEPVTCSLRLKIAMEIAYGIAYL 59
           +L  C    +    V EYV  G L   +YH +Q     EP      +  A EIA G+ +L
Sbjct: 406 QLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGRFKEPHA----VFYAAEIAIGLFFL 458
Query: 60  HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMGTFGYLPPEY 118
               S+ I++R++K  N++   +   K+ DF    E+I +G T       GT  Y+ PE 
Sbjct: 459 Q---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIAPEI 513
Query: 119 IATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
           IA     +  D ++F G      L G+A +  ED
Sbjct: 514 IAYQPYGKSVDWWAF-GVLLYEMLAGQAPFEGED 546

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 17/97 (17%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPE------------ 98
           +I   ++Y+H   S+ I+ RN+KP NI   E    K+ DF  ++++              
Sbjct: 124 QILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 99  -GETRIRGRVMGTFGYLPPEYI-ATGDCNEKCDVYSF 133
            G +      +GT  Y+  E +  TG  NEK D YS 
Sbjct: 181 PGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSL 217

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 10  TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
           +E P+ +V EY+  G+L D +      + R P          + +A +IA G+AY+    
Sbjct: 83  SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL--------VDMAAQIASGMAYVE--- 131
Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
               V R++  +NIL  E  V K+ DF  +  I + E   R        +  PE    G 
Sbjct: 132 RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 124 CNEKCDVYSF 133
              K DV+SF
Sbjct: 192 FTIKSDVWSF 201

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 13/128 (10%)
Query: 10  TENPV-LVFEYVEYGTLADRIYH---PRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
           T+ P+ ++ E++  G+L D +      +QP          +  + +IA G+A++     R
Sbjct: 253 TKEPIYIITEFMAKGSLLDFLKSDEGSKQP------LPKLIDFSAQIAEGMAFIE---QR 303
Query: 66  PIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN 125
             + R+++ +NIL     V K+ DF  +  I + E   R        +  PE I  G   
Sbjct: 304 NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 363
Query: 126 EKCDVYSF 133
            K DV+SF
Sbjct: 364 IKSDVWSF 371

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RLIG C + E  +LV E    G L   +   R    E +  S   ++  +++ G+ YL 
Sbjct: 73  VRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLE 127
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPEY 118
               +  V R++   N+L   +  AK+ DF  S+++   ++    R  G +   +  PE 
Sbjct: 128 ---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC 184
Query: 119 IATGDCNEKCDVYSF 133
           I     + + DV+S+
Sbjct: 185 INFRKFSSRSDVWSY 199

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 13/128 (10%)
Query: 10  TENPV-LVFEYVEYGTLADRIYH---PRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
           T+ P+ ++ E++  G+L D +      +QP          +  + +IA G+A++     R
Sbjct: 80  TKEPIYIITEFMAKGSLLDFLKSDEGSKQP------LPKLIDFSAQIAEGMAFIE---QR 130
Query: 66  PIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN 125
             + R+++ +NIL     V K+ DF  +  I + E   R        +  PE I  G   
Sbjct: 131 NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 190
Query: 126 EKCDVYSF 133
            K DV+SF
Sbjct: 191 IKSDVWSF 198

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N++  +Q   ++ DF  ++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT  YL P  I +   N+  D ++ 
Sbjct: 197 XLCGTPEYLAPAIILSKGYNKAVDWWAL 224

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 13/122 (10%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LV + V  G L DRI        +  +  +R     ++   + YLH      IV R++KP
Sbjct: 97  LVMQLVSGGELFDRIVEKGFYTEKDASTLIR-----QVLDAVYYLH---RMGIVHRDLKP 148
Query: 75  SNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
            N+L+    E+S   + DF  S+   EG+  +     GT GY+ PE +A    ++  D +
Sbjct: 149 ENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCW 206
Query: 132 SF 133
           S 
Sbjct: 207 SI 208

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10  TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
           +E P+ +V EY+  G+L D +      + R P          + ++ +IA G+AY+    
Sbjct: 80  SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQL--------VDMSAQIASGMAYVE--- 128
Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
               V R+++ +NIL  E  V K+ DF  +  I + E   R        +  PE    G 
Sbjct: 129 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 188
Query: 124 CNEKCDVYSF 133
              K DV+SF
Sbjct: 189 FTIKSDVWSF 198

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L  EY   G L DRI  P     EP       +   ++  G+ YLH      I  R++KP
Sbjct: 81  LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 132
Query: 75  SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
            N+L  E+   K+ DF  +         R+  ++ GT  Y+ PE +   + + E  DV+S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 192

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L  EY   G L DRI  P     EP       +   ++  G+ YLH      I  R++KP
Sbjct: 82  LFLEYCSGGELFDRI-EPDIGMPEPDAQ----RFFHQLMAGVVYLH---GIGITHRDIKP 133
Query: 75  SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
            N+L  E+   K+ DF  +         R+  ++ GT  Y+ PE +   + + E  DV+S
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 193

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12  NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
           N  L+ EY+ YG+L D +    Q + E +     L+   +I  G+ YL    ++  + RN
Sbjct: 88  NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRN 140
Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
           +   NIL + ++  K+ DF  ++ +P+ +   + +  G     +  PE +     +   D
Sbjct: 141 LATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASD 200
Query: 130 VYSF 133
           V+SF
Sbjct: 201 VWSF 204

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L  EY   G L DRI  P     EP       +   ++  G+ YLH      I  R++KP
Sbjct: 81  LFLEYCSGGELFDRI-EPDIGMPEPDAQ----RFFHQLMAGVVYLH---GIGITHRDIKP 132
Query: 75  SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
            N+L  E+   K+ DF  +         R+  ++ GT  Y+ PE +   + + E  DV+S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 192

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L  EY   G L DRI  P     EP       +   ++  G+ YLH      I  R++KP
Sbjct: 81  LFLEYCSGGELFDRI-EPDIGMPEPDAQ----RFFHQLMAGVVYLH---GIGITHRDIKP 132
Query: 75  SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
            N+L  E+   K+ DF  +         R+  ++ GT  Y+ PE +   + + E  DV+S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 192

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L  EY   G L DRI  P     EP       +   ++  G+ YLH      I  R++KP
Sbjct: 81  LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 132
Query: 75  SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
            N+L  E+   K+ DF  +         R+  ++ GT  Y+ PE +   + + E  DV+S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 192

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
           EI   + YLH    + I+ R++KP NIL  E    ++ DF  ++ + PE +       +G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
           T  Y+ PE +      +  D+++ 
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWAL 220

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 13/143 (9%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ-----PNFEPVTCSLR----LKIAME 51
           + L+G C      +++ EY  YG L + +    +     P F     +L     L  + +
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQ 172
Query: 52  IAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRI-RGRVMGT 110
           +A G+A+L    S+  + R+V   N+L     VAK+ DF  +  I      I +G     
Sbjct: 173 VAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 111 FGYLPPEYIATGDCNEKCDVYSF 133
             ++ PE I       + DV+S+
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSY 252

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
           EI   + YLH    + I+ R++KP NIL  E    ++ DF  ++ + PE +       +G
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
           T  Y+ PE +      +  D+++ 
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWAL 218

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 61/152 (40%), Gaps = 22/152 (14%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTL------------ADRIYHPRQPNFEP------VTC 42
           + L+G C  +    L+FEY  YG L             D I +  Q   E       +T 
Sbjct: 112 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 171
Query: 43  SLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGET 101
              L  A ++A G+ +L     +  V R++   N+L     V K+ DF  +  I  +   
Sbjct: 172 EDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 102 RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
            +RG       ++ PE +  G    K DV+S+
Sbjct: 229 VVRGNARLPVKWMAPESLFEGIYTIKSDVWSY 260

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRG--- 105
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++G   
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGATW 217
Query: 106 RVMGTFGYLPPEYIATGDCNEKCDVYSF 133
            + GT  YL PE I +   N+  D ++ 
Sbjct: 218 TLCGTPEYLAPEIILSKGYNKAVDWWAL 245

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
           EI   + YLH    + I+ R++KP NIL  E    ++ DF  ++ + PE +       +G
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 197
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
           T  Y+ PE +      +  D+++ 
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWAL 221

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
           EI   + YLH    + I+ R++KP NIL  E    ++ DF  ++ + PE +       +G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
           T  Y+ PE +      +  D+++ 
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWAL 220

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L  EY   G L DRI  P     EP       +   ++  G+ YLH      I  R++KP
Sbjct: 81  LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 132
Query: 75  SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
            N+L  E+   K+ DF  +         R+  ++ GT  Y+ PE +   + + E  DV+S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
           EI   + YLH    + I+ R++KP NIL  E    ++ DF  ++ + PE +       +G
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 197
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
           T  Y+ PE +      +  D+++ 
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWAL 221

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L  EY   G L DRI  P     EP       +   ++  G+ YLH      I  R++KP
Sbjct: 81  LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 132
Query: 75  SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
            N+L  E+   K+ DF  +         R+  ++ GT  Y+ PE +   + + E  DV+S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
           EI   + YLH    + I+ R++KP NIL  E    ++ DF  ++ + PE +       +G
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
           T  Y+ PE +      +  D+++ 
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWAL 218

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
           EI   + YLH    + I+ R++KP NIL  E    ++ DF  ++ + PE +       +G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
           T  Y+ PE +      +  D+++ 
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWAL 220

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
           EI   + YLH    + I+ R++KP NIL  E    ++ DF  ++ + PE +       +G
Sbjct: 145 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 201
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
           T  Y+ PE +      +  D+++ 
Sbjct: 202 TAQYVSPELLTEKSACKSSDLWAL 225

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L  EY   G L DRI  P     EP       +   ++  G+ YLH      I  R++KP
Sbjct: 81  LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 132
Query: 75  SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
            N+L  E+   K+ DF  +         R+  ++ GT  Y+ PE +   + + E  DV+S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/157 (22%), Positives = 66/157 (42%), Gaps = 31/157 (19%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ-------------------PNFEPVT 41
           ++L G C +    +L+ EY +YG+L   +   R+                   P+   +T
Sbjct: 89  IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 42  CSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET 101
               +  A +I+ G+ YL       +V R++   NIL  E    K+ DF  S  + E ++
Sbjct: 149 MGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 102 RIRGRVMGTFGYLPPEYIATGDC-----NEKCDVYSF 133
            ++     + G +P +++A           + DV+SF
Sbjct: 206 XVK----RSQGRIPVKWMAIESLFDHIYTTQSDVWSF 238

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
           EI   + YLH    + I+ R++KP NIL  E    ++ DF  ++ + PE +       +G
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
           T  Y+ PE +      +  D+++ 
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWAL 218

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
           EI   + YLH    + I+ R++KP NIL  E    ++ DF  ++ + PE +       +G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
           T  Y+ PE +      +  D+++ 
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWAL 220

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L  EY   G L DRI  P     EP       +   ++  G+ YLH      I  R++KP
Sbjct: 82  LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 133
Query: 75  SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
            N+L  E+   K+ DF  +         R+  ++ GT  Y+ PE +   + + E  DV+S
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L  EY   G L DRI  P     EP       +   ++  G+ YLH      I  R++KP
Sbjct: 82  LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 133
Query: 75  SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
            N+L  E+   K+ DF  +         R+  ++ GT  Y+ PE +   + + E  DV+S
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L  EY   G L DRI  P     EP       +   ++  G+ YLH      I  R++KP
Sbjct: 81  LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 132
Query: 75  SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
            N+L  E+   K+ DF  +         R+  ++ GT  Y+ PE +   + + E  DV+S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/157 (22%), Positives = 66/157 (42%), Gaps = 31/157 (19%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ-------------------PNFEPVT 41
           ++L G C +    +L+ EY +YG+L   +   R+                   P+   +T
Sbjct: 89  IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 42  CSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET 101
               +  A +I+ G+ YL       +V R++   NIL  E    K+ DF  S  + E ++
Sbjct: 149 MGDLISFAWQISQGMQYLA---EMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 102 RIRGRVMGTFGYLPPEYIATGDC-----NEKCDVYSF 133
            ++     + G +P +++A           + DV+SF
Sbjct: 206 XVK----RSQGRIPVKWMAIESLFDHIYTTQSDVWSF 238

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L  EY   G L DRI  P     EP       +   ++  G+ YLH      I  R++KP
Sbjct: 82  LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 133
Query: 75  SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
            N+L  E+   K+ DF  +         R+  ++ GT  Y+ PE +   + + E  DV+S
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L  EY   G L DRI  P     EP       +   ++  G+ YLH      I  R++KP
Sbjct: 81  LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 132
Query: 75  SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
            N+L  E+   K+ DF  +         R+  ++ GT  Y+ PE +   + + E  DV+S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L  EY   G L DRI  P     EP       +   ++  G+ YLH      I  R++KP
Sbjct: 82  LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 133
Query: 75  SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
            N+L  E+   K+ DF  +         R+  ++ GT  Y+ PE +   + + E  DV+S
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L  EY   G L DRI  P     EP       +   ++  G+ YLH      I  R++KP
Sbjct: 82  LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 133
Query: 75  SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
            N+L  E+   K+ DF  +         R+  ++ GT  Y+ PE +   + + E  DV+S
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
           EI   + YLH    + I+ R++KP NIL  E    ++ DF  ++ + PE +       +G
Sbjct: 115 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 171
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
           T  Y+ PE +      +  D+++ 
Sbjct: 172 TAQYVSPELLTEKSACKSSDLWAL 195

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L  EY   G L DRI  P     EP       +   ++  G+ YLH      I  R++KP
Sbjct: 80  LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 131
Query: 75  SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
            N+L  E+   K+ DF  +         R+  ++ GT  Y+ PE +   + + E  DV+S
Sbjct: 132 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 191

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L  EY   G L DRI  P     EP       +   ++  G+ YLH      I  R++KP
Sbjct: 82  LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 133
Query: 75  SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
            N+L  E+   K+ DF  +         R+  ++ GT  Y+ PE +   + + E  DV+S
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L  EY   G L DRI  P     EP       +   ++  G+ YLH      I  R++KP
Sbjct: 81  LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 132
Query: 75  SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
            N+L  E+   K+ DF  +         R+  ++ GT  Y+ PE +   + + E  DV+S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
           EI   + YLH    + I+ R++KP NIL  E    ++ DF  ++ + PE +       +G
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVG 194
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
           T  Y+ PE +      +  D+++ 
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWAL 218

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
           EI   + YLH    + I+ R++KP NIL  E    ++ DF  ++ + PE +       +G
Sbjct: 122 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 178
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
           T  Y+ PE +      +  D+++ 
Sbjct: 179 TAQYVSPELLTEKSACKSSDLWAL 202

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
           EI   + YLH    + I+ R++KP NIL  E    ++ DF  ++ + PE +       +G
Sbjct: 143 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 199
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
           T  Y+ PE +      +  D+++ 
Sbjct: 200 TAQYVSPELLTEKSACKSSDLWAL 223

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L  EY   G L DRI  P     EP       +   ++  G+ YLH      I  R++KP
Sbjct: 81  LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 132
Query: 75  SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
            N+L  E+   K+ DF  +         R+  ++ GT  Y+ PE +   + + E  DV+S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
           EI   + YLH    + I+ R++KP NIL  E    ++ DF  ++ + PE +       +G
Sbjct: 116 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 172
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
           T  Y+ PE +      +  D+++ 
Sbjct: 173 TAQYVSPELLTEKSACKSSDLWAL 196

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
           EI   + YLH    + I+ R++KP NIL  E    ++ DF  ++ + PE +       +G
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 193
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
           T  Y+ PE +      +  D+++ 
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWAL 217

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L  EY   G L DRI  P     EP       +   ++  G+ YLH      I  R++KP
Sbjct: 82  LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 133
Query: 75  SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
            N+L  E+   K+ DF  +         R+  ++ GT  Y+ PE +   + + E  DV+S
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
           EI   + YLH    + I+ R++KP NIL  E    ++ DF  ++ + PE +       +G
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 193
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
           T  Y+ PE +      +  D+++ 
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWAL 217

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L  EY   G L DRI  P     EP       +   ++  G+ YLH      I  R++KP
Sbjct: 81  LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 132
Query: 75  SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
            N+L  E+   K+ DF  +         R+  ++ GT  Y+ PE +   + + E  DV+S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
           EI   + YLH    + I+ R++KP NIL  E    ++ DF  ++ + PE +       +G
Sbjct: 118 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 174
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
           T  Y+ PE +      +  D+++ 
Sbjct: 175 TAQYVSPELLTEKSACKSSDLWAL 198

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
           EI   + YLH    + I+ R++KP NIL  E    ++ DF  ++ + PE +       +G
Sbjct: 117 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 173
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
           T  Y+ PE +      +  D+++ 
Sbjct: 174 TAQYVSPELLTEKSACKSSDLWAL 197

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 14/121 (11%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LV + V  G L DRI    +  +     SL   +  ++   + YLH      IV R++KP
Sbjct: 83  LVMQLVSGGELFDRIL--ERGVYTEKDASL---VIQQVLSAVKYLH---ENGIVHRDLKP 134
Query: 75  SNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
            N+L+   +E S   + DF  S+    G   I     GT GY+ PE +A    ++  D +
Sbjct: 135 ENLLYLTPEENSKIMITDFGLSKMEQNG---IMSTACGTPGYVAPEVLAQKPYSKAVDCW 191
Query: 132 S 132
           S
Sbjct: 192 S 192

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 47  KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR 106
           K+++ +  G+ YL       I+ R+VKPSNIL   +   KL DF  S  + +    +   
Sbjct: 111 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---EMANE 165
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
            +GT  Y+ PE +     + + D++S 
Sbjct: 166 FVGTRSYMSPERLQGTHYSVQSDIWSM 192

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RLIG C + +   +V E V+ G   D +   R         +L L++  + A G+ YL 
Sbjct: 175 VRLIGVCTQKQPIYIVMELVQGG---DFLTFLRTEGARLRVKTL-LQMVGDAAAGMEYLE 230
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT-FGYLPPEYI 119
              S+  + R++   N L  E++V K+ DF  S    +G     G +      +  PE +
Sbjct: 231 ---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEAL 287
Query: 120 ATGDCNEKCDVYSF 133
             G  + + DV+SF
Sbjct: 288 NYGRYSSESDVWSF 301

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT   L PE I +   N+  D ++ 
Sbjct: 197 XLCGTPEALAPEIILSKGYNKAVDWWAL 224

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 14  VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
           +++ E +E G L  RI       F     +   +I  +I   I +LH   S  I  R+VK
Sbjct: 102 LIIMECMEGGELFSRIQERGDQAFTEREAA---EIMRDIGTAIQFLH---SHNIAHRDVK 155
Query: 74  PSNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDV 130
           P N+L+   ++ +V KL DF +++   +   +       T  Y+ PE +     ++ CD+
Sbjct: 156 PENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY---TPYYVAPEVLGPEKYDKSCDM 212
Query: 131 YSF 133
           +S 
Sbjct: 213 WSL 215

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 47  KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR 106
           K+++ +  G+ YL       I+ R+VKPSNIL   +   KL DF  S  + +    +   
Sbjct: 127 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 181
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
            +GT  Y+ PE +     + + D++S 
Sbjct: 182 FVGTRSYMSPERLQGTHYSVQSDIWSM 208

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 14  VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
           +++ E +E G L  RI       F     +   +I  +I   I +LH   S  I  R+VK
Sbjct: 83  LIIMECMEGGELFSRIQERGDQAFTEREAA---EIMRDIGTAIQFLH---SHNIAHRDVK 136
Query: 74  PSNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDV 130
           P N+L+   ++ +V KL DF +++   +   +       T  Y+ PE +     ++ CD+
Sbjct: 137 PENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY---TPYYVAPEVLGPEKYDKSCDM 193
Query: 131 YSF 133
           +S 
Sbjct: 194 WSL 196

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12  NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
           N  L+ EY+ YG+L D +    Q + E +     L+   +I  G+ YL    ++  + R+
Sbjct: 90  NLKLIMEYLPYGSLRDYL----QAHAERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 142
Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
           +   NIL + ++  K+ DF  ++ +P+ +   + +  G     +  PE +     +   D
Sbjct: 143 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 202
Query: 130 VYSF 133
           V+SF
Sbjct: 203 VWSF 206

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12  NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
           N  L+ EY+ YG+L D +    Q + E +     L+   +I  G+ YL    ++  + R+
Sbjct: 105 NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 157
Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
           +   NIL + ++  K+ DF  ++ +P+ +   + +  G     +  PE +     +   D
Sbjct: 158 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 217
Query: 130 VYSF 133
           V+SF
Sbjct: 218 VWSF 221

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12  NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
           N  L+ EY+ YG+L D +    Q + E +     L+   +I  G+ YL    ++  + R+
Sbjct: 94  NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 146
Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
           +   NIL + ++  K+ DF  ++ +P+ +   + +  G     +  PE +     +   D
Sbjct: 147 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 206
Query: 130 VYSF 133
           V+SF
Sbjct: 207 VWSF 210

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12  NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
           N  L+ EY+ YG+L D +    Q + E +     L+   +I  G+ YL    ++  + R+
Sbjct: 105 NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 157
Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
           +   NIL + ++  K+ DF  ++ +P+ +   + +  G     +  PE +     +   D
Sbjct: 158 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 217
Query: 130 VYSF 133
           V+SF
Sbjct: 218 VWSF 221

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12  NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
           N  L+ EY+ YG+L D +    Q + E +     L+   +I  G+ YL    ++  + R+
Sbjct: 90  NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 142
Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
           +   NIL + ++  K+ DF  ++ +P+ +   + +  G     +  PE +     +   D
Sbjct: 143 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 202
Query: 130 VYSF 133
           V+SF
Sbjct: 203 VWSF 206

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12  NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
           N  L+ EY+ YG+L D +    Q + E +     L+   +I  G+ YL    ++  + R+
Sbjct: 91  NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 143
Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
           +   NIL + ++  K+ DF  ++ +P+ +   + +  G     +  PE +     +   D
Sbjct: 144 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 203
Query: 130 VYSF 133
           V+SF
Sbjct: 204 VWSF 207

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12  NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
           N  L+ EY+ YG+L D +    Q + E +     L+   +I  G+ YL    ++  + R+
Sbjct: 92  NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 144
Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
           +   NIL + ++  K+ DF  ++ +P+ +   + +  G     +  PE +     +   D
Sbjct: 145 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 204
Query: 130 VYSF 133
           V+SF
Sbjct: 205 VWSF 208

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12  NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
           N  L+ EY+ YG+L D +    Q + E +     L+   +I  G+ YL    ++  + R+
Sbjct: 87  NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 139
Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
           +   NIL + ++  K+ DF  ++ +P+ +   + +  G     +  PE +     +   D
Sbjct: 140 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 199
Query: 130 VYSF 133
           V+SF
Sbjct: 200 VWSF 203

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/157 (22%), Positives = 66/157 (42%), Gaps = 31/157 (19%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ-------------------PNFEPVT 41
           ++L G C +    +L+ EY +YG+L   +   R+                   P+   +T
Sbjct: 89  IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 42  CSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET 101
               +  A +I+ G+ YL       +V R++   NIL  E    K+ DF  S  + E ++
Sbjct: 149 MGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 102 RIRGRVMGTFGYLPPEYIATGDC-----NEKCDVYSF 133
            ++     + G +P +++A           + DV+SF
Sbjct: 206 YVK----RSQGRIPVKWMAIESLFDHIYTTQSDVWSF 238

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12  NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
           N  L+ EY+ YG+L D +    Q + E +     L+   +I  G+ YL    ++  + R+
Sbjct: 93  NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 145
Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
           +   NIL + ++  K+ DF  ++ +P+ +   + +  G     +  PE +     +   D
Sbjct: 146 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 205
Query: 130 VYSF 133
           V+SF
Sbjct: 206 VWSF 209

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12  NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
           N  L+ EY+ YG+L D +    Q + E +     L+   +I  G+ YL    ++  + R+
Sbjct: 87  NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 139
Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
           +   NIL + ++  K+ DF  ++ +P+ +   + +  G     +  PE +     +   D
Sbjct: 140 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 199
Query: 130 VYSF 133
           V+SF
Sbjct: 200 VWSF 203

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12  NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
           N  L+ EY+ YG+L D +    Q + E +     L+   +I  G+ YL    ++  + R+
Sbjct: 86  NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 138
Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
           +   NIL + ++  K+ DF  ++ +P+ +   + +  G     +  PE +     +   D
Sbjct: 139 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 198
Query: 130 VYSF 133
           V+SF
Sbjct: 199 VWSF 202

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12  NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
           N  L+ EY+ YG+L D +    Q + E +     L+   +I  G+ YL    ++  + R+
Sbjct: 85  NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 137
Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
           +   NIL + ++  K+ DF  ++ +P+ +   + +  G     +  PE +     +   D
Sbjct: 138 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 197
Query: 130 VYSF 133
           V+SF
Sbjct: 198 VWSF 201

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 11/134 (8%)
Query: 1   MRLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
           ++L+G  +E +  + +V EY+  G+L D +   R      +     LK ++++   + YL
Sbjct: 68  VQLLGVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYL 124
Query: 60  HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
                   V R++   N+L  E +VAK+ DF  ++      T+  G++     +  PE +
Sbjct: 125 E---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE--ASSTQDTGKL--PVKWTAPEAL 177
Query: 120 ATGDCNEKCDVYSF 133
                + K DV+SF
Sbjct: 178 REAAFSTKSDVWSF 191

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 13/143 (9%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ-----PNFEPV--TCSLR--LKIAME 51
           + L+G C      +++ EY  YG L + +    +     P F     T S R  L  + +
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQ 172
Query: 52  IAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRI-RGRVMGT 110
           +A G+A+L    S+  + R+V   N+L     VAK+ DF  +  I      I +G     
Sbjct: 173 VAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 111 FGYLPPEYIATGDCNEKCDVYSF 133
             ++ PE I       + DV+S+
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSY 252

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 47  KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR 106
           K+++ +  G+ YL       I+ R+VKPSNIL   +   KL DF  S  + +    +   
Sbjct: 135 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 189
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
            +GT  Y+ PE +     + + D++S 
Sbjct: 190 FVGTRSYMSPERLQGTHYSVQSDIWSM 216

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 17/97 (17%)
Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPE------------ 98
           +I   ++Y+H   S+ I+ R++KP NI   E    K+ DF  ++++              
Sbjct: 124 QILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 99  -GETRIRGRVMGTFGYLPPEYI-ATGDCNEKCDVYSF 133
            G +      +GT  Y+  E +  TG  NEK D+YS 
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSL 217

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 47  KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR 106
           K+++ +  G+ YL       I+ R+VKPSNIL   +   KL DF  S  + +    +   
Sbjct: 170 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 224
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
            +GT  Y+ PE +     + + D++S 
Sbjct: 225 FVGTRSYMSPERLQGTHYSVQSDIWSM 251

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL     + E   ++ E++  G+L D +   +      V     +  + +IA G+AY+ 
Sbjct: 70  VRLYAVVTKEEPIYIITEFMAKGSLLDFL---KSDEGGKVLLPKLIDFSAQIAEGMAYIE 126
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + R+++ +N+L  E  + K+ DF  +  I + E   R        +  PE I 
Sbjct: 127 ---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN 183
Query: 121 TGDCNEKCDVYSF 133
            G    K +V+SF
Sbjct: 184 FGCFTIKSNVWSF 196

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 11/134 (8%)
Query: 1   MRLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
           ++L+G  +E +  + +V EY+  G+L D +   R      +     LK ++++   + YL
Sbjct: 77  VQLLGVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYL 133
Query: 60  HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
                   V R++   N+L  E +VAK+ DF  ++      T+  G++     +  PE +
Sbjct: 134 E---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS--STQDTGKL--PVKWTAPEAL 186
Query: 120 ATGDCNEKCDVYSF 133
                + K DV+SF
Sbjct: 187 REKKFSTKSDVWSF 200

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12  NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
           N  L+ EY+ YG+L D +    Q + E +     L+   +I  G+ YL    ++  + R+
Sbjct: 118 NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 170
Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
           +   NIL + ++  K+ DF  ++ +P+ +   + +  G     +  PE +     +   D
Sbjct: 171 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 230
Query: 130 VYSF 133
           V+SF
Sbjct: 231 VWSF 234

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 7/125 (5%)
Query: 10  TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
           +E P+ +V EY+  G+L D +   +      +     + +A ++A G+AY+        +
Sbjct: 74  SEEPIYIVTEYMNKGSLLDFL---KDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYI 127
Query: 69  FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
            R+++ +NIL     + K+ DF  +  I + E   R        +  PE    G    K 
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 129 DVYSF 133
           DV+SF
Sbjct: 188 DVWSF 192

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 47  KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR 106
           K+++ +  G+ YL       I+ R+VKPSNIL   +   KL DF  S  + +    +   
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 162
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
            +GT  Y+ PE +     + + D++S 
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSM 189

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 47  KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR 106
           K+++ +  G+ YL       I+ R+VKPSNIL   +   KL DF  S  + +    +   
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 162
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
            +GT  Y+ PE +     + + D++S 
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSM 189

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 47  KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR 106
           K+++ +  G+ YL       I+ R+VKPSNIL   +   KL DF  S  + +    +   
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 162
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
            +GT  Y+ PE +     + + D++S 
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSM 189

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 47  KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR 106
           K+++ +  G+ YL       I+ R+VKPSNIL   +   KL DF  S  + +    +   
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 162
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
            +GT  Y+ PE +     + + D++S 
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSM 189

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 47  KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR 106
           K+++ +  G+ YL       I+ R+VKPSNIL   +   KL DF  S  + +    +   
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 162
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
            +GT  Y+ PE +     + + D++S 
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSM 189

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 11/134 (8%)
Query: 1   MRLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
           ++L+G  +E +  + +V EY+  G+L D +   R      +     LK ++++   + YL
Sbjct: 62  VQLLGVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYL 118
Query: 60  HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
                   V R++   N+L  E +VAK+ DF  ++      T+  G++     +  PE +
Sbjct: 119 E---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE--ASSTQDTGKL--PVKWTAPEAL 171
Query: 120 ATGDCNEKCDVYSF 133
                + K DV+SF
Sbjct: 172 REKKFSTKSDVWSF 185

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +++  ++V EY+E G+L D         F  +     L+    IA G+ YL 
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLS 164
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLPPE 117
                  V R++   NIL     V K+ DF  S   E  PE     RG  +    +  PE
Sbjct: 165 ---DMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTSPE 220
Query: 118 YIATGDCNEKCDVYSF 133
            IA        DV+S+
Sbjct: 221 AIAYRKFTSASDVWSY 236

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 23/149 (15%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE-----------PVTCSLRLKIA 49
           + L+G C +     ++ EY   G L + +   R P  E            ++    +  A
Sbjct: 97  INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCA 156
Query: 50  MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMG 109
            ++A G+ YL    S+  + R++   N+L  E +V K+ DF  +  I      I      
Sbjct: 157 YQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDXXKKT 209
Query: 110 TFGYLPPEYIATGDC-----NEKCDVYSF 133
           T G LP +++A           + DV+SF
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSF 238

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RLIG C + +   +V E V+ G   D +   R         +L L++  + A G+ YL 
Sbjct: 175 VRLIGVCTQKQPIYIVMELVQGG---DFLTFLRTEGARLRVKTL-LQMVGDAAAGMEYLE 230
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT-FGYLPPEYI 119
              S+  + R++   N L  E++V K+ DF  S    +G     G +      +  PE +
Sbjct: 231 ---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEAL 287
Query: 120 ATGDCNEKCDVYSF 133
             G  + + DV+SF
Sbjct: 288 NYGRYSSESDVWSF 301

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 11/122 (9%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L+ E++  G+L +  Y P+  N   +    +LK A++I  G+ YL    SR  V R++  
Sbjct: 90  LIMEFLPSGSLKE--YLPKNKN--KINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAA 142
Query: 75  SNILFQEQSVAKLFDFSYSESI---PEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
            N+L + +   K+ DF  +++I    E  T    R    F Y  PE +         DV+
Sbjct: 143 RNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVW 201
Query: 132 SF 133
           SF
Sbjct: 202 SF 203

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 11/134 (8%)
Query: 1   MRLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
           ++L+G  +E +  + +V EY+  G+L D +   R      +     LK ++++   + YL
Sbjct: 249 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYL 305
Query: 60  HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
                   V R++   N+L  E +VAK+ DF  ++      T+  G++     +  PE +
Sbjct: 306 E---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA--SSTQDTGKL--PVKWTAPEAL 358
Query: 120 ATGDCNEKCDVYSF 133
                + K DV+SF
Sbjct: 359 REKKFSTKSDVWSF 372

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +++  ++V EY+E G+L D         F  +     L+    IA G+ YL 
Sbjct: 97  IRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLS 152
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLPPE 117
                  V R++   NIL     V K+ DF  S   E  PE     RG  +    +  PE
Sbjct: 153 ---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTSPE 208
Query: 118 YIATGDCNEKCDVYSF 133
            IA        DV+S+
Sbjct: 209 AIAYRKFTSASDVWSY 224

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12  NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
           N  L+ EY+ YG+L D +    Q + E +     L+   +I  G+ YL    ++  + R+
Sbjct: 87  NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 139
Query: 72  VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
           +   NIL + ++  K+ DF  ++ +P+ +   + +  G     +  PE +     +   D
Sbjct: 140 LATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASD 199
Query: 130 VYSF 133
           V+SF
Sbjct: 200 VWSF 203

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 11/122 (9%)
Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           L+ E++  G+L +  Y P+  N   +    +LK A++I  G+ YL    SR  V R++  
Sbjct: 102 LIMEFLPSGSLKE--YLPKNKN--KINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAA 154
Query: 75  SNILFQEQSVAKLFDFSYSESI---PEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
            N+L + +   K+ DF  +++I    E  T    R    F Y  PE +         DV+
Sbjct: 155 RNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVW 213
Query: 132 SF 133
           SF
Sbjct: 214 SF 215

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 7/120 (5%)
Query: 15  LVFEYVEYGTLADRIYH-PRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
           +V E  + G L+  I H  +Q    P       K  +++   + ++H   SR ++ R++K
Sbjct: 109 IVLELADAGDLSRMIKHFKKQKRLIPERTVW--KYFVQLCSALEHMH---SRRVMHRDIK 163
Query: 74  PSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
           P+N+      V KL D          +T     ++GT  Y+ PE I     N K D++S 
Sbjct: 164 PANVFITATGVVKLGDLGLGRFF-SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSL 222

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   +++  ++V EY+E G+L D         F  +     L+    IA G+ YL 
Sbjct: 80  IRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLS 135
Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLPPE 117
                  V R++   NIL     V K+ DF  S   E  PE     RG  +    +  PE
Sbjct: 136 ---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTSPE 191
Query: 118 YIATGDCNEKCDVYSF 133
            IA        DV+S+
Sbjct: 192 AIAYRKFTSASDVWSY 207

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 19/147 (12%)
Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRI-----------YHPRQPNFEPVTCSLRLKIA 49
           + L+G C +     ++ EY   G L + +           Y+P     E ++    +  A
Sbjct: 97  INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCA 156
Query: 50  MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE---TRIRGR 106
            ++A G+ YL    S+  + R++   N+L  E +V K+ DF  +  I   +       GR
Sbjct: 157 YQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 213
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
           +     ++ PE +       + DV+SF
Sbjct: 214 L--PVKWMAPEALFDRIYTHQSDVWSF 238

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	159
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-43
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	7e-43
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	3e-40
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-27
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-26
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-26
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	7e-26
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-25
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	6e-24
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-22
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-22
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-21
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	4e-21
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-20
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-20
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	5e-20
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-19
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-19
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	5e-18
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	9e-16
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-15
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	3e-15
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	3e-15
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	4e-15
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	4e-15
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-14
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-14
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	3e-14
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	3e-14
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	6e-14
2a19_B	284	Interferon-induced, double-stranded RNA-activated	7e-14
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	9e-14
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	1e-13
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-13
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	1e-13
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-13
3ork_A	311	Serine/threonine protein kinase; structural genomi	3e-13
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	3e-13
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	3e-13
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	6e-13
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	6e-13
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	6e-13
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-12
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-12
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	3e-12
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-12
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	4e-12
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	4e-12
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	4e-12
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	6e-12
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	6e-12
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	6e-12
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	7e-12
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	8e-12
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	8e-12
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-11
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-11
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-11
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-11
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	2e-11
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-11
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	3e-11
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	3e-11
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	3e-11
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	3e-11
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	3e-11
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	4e-11
4aoj_A	329	High affinity nerve growth factor receptor; transf	5e-11
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	5e-11
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	6e-11
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	6e-11
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	9e-11
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	9e-11
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-10
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-10
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-10
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-10
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-10
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-10
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	3e-10
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	4e-10
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	4e-10
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	4e-10
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	7e-10
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	8e-10
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	9e-10
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	9e-10
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	1e-09
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-09
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	1e-09
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-09
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-09
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-09
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	1e-09
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-09
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-09
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-09
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-09
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-09
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-09
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-09
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	2e-09
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	3e-09
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	3e-09
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	3e-09
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	4e-09
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	5e-09
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	5e-09
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	5e-09
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	6e-09
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	6e-09
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	7e-09
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	8e-09
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	8e-09
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	9e-09
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	9e-09
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	9e-09
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	9e-09
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	1e-08
2dyl_A	318	Dual specificity mitogen-activated protein kinase	1e-08
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	1e-08
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-08
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-08
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	1e-08
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-08
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	1e-08
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-08
3bhy_A	283	Death-associated protein kinase 3; death associate	1e-08
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	3e-08
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	3e-08
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	4e-08
3fme_A	290	Dual specificity mitogen-activated protein kinase;	4e-08
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	4e-08
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	7e-08
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	7e-08
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	9e-08
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-07
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-07
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	1e-07
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-07
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	2e-07
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	2e-07
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-07
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-07
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	3e-07
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	3e-07
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	3e-07
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	4e-07
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	7e-07
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	8e-07
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	8e-07
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	8e-07
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	9e-07
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-06
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-06
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-06
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-06
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	3e-06
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	3e-06
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	3e-06
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	3e-06
3uqc_A	286	Probable conserved transmembrane protein; structur	4e-06
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	6e-06
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	7e-06
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	7e-06
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	7e-06
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	7e-06
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	8e-06
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	8e-06
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	8e-06
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	9e-06
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	1e-05
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-05
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-05
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-05
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-05
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-05
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	3e-05
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	3e-05
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	3e-05
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	4e-05
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	4e-05
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	5e-05
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	5e-05
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	6e-05
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	1e-04
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	1e-04
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-04
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	2e-04
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	3e-04
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	3e-04
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	3e-04
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	3e-04
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	4e-04
3niz_A	311	Rhodanese family protein; structural genomics, str	4e-04
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	4e-04
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	5e-04
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	5e-04
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	6e-04
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	6e-04
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	6e-04
3o0g_A	292	Cell division protein kinase 5; kinase activator c	7e-04
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	8e-04
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	9e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  145 bits (369), Expect = 1e-43
 Identities = 45/133 (33%), Positives = 75/133 (56%), Gaps = 1/133 (0%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G C+     +LV+ Y+  G++A  +   R  +  P+    R +IA+  A G+AYLH
Sbjct: 90  LRLRGFCMTPTERLLVYPYMANGSVASCL-RERPESQPPLDWPKRQRIALGSARGLAYLH 148

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
                 I+ R+VK +NIL  E+  A + DF  ++ +   +T +   V GT G++ PEY++
Sbjct: 149 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS 208

Query: 121 TGDCNEKCDVYSF 133
           TG  +EK DV+ +
Sbjct: 209 TGKSSEKTDVFGY 221

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  143 bits (363), Expect = 7e-43
 Identities = 52/133 (39%), Positives = 71/133 (53%), Gaps = 5/133 (3%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
            LIG C E    +L+++Y+E G L   +Y    P    ++   RL+I +  A G+ YLH 
Sbjct: 99  SLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPT-MSMSWEQRLEICIGAARGLHYLH- 156

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEG-ETRIRGRVMGTFGYLPPEYIA 120
             +R I+ R+VK  NIL  E  V K+ DF  S+   E  +T +   V GT GY+ PEY  
Sbjct: 157 --TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFI 214

Query: 121 TGDCNEKCDVYSF 133
            G   EK DVYSF
Sbjct: 215 KGRLTEKSDVYSF 227

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  136 bits (345), Expect = 3e-40
 Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 21/161 (13%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
            L+G   + ++  LV+ Y+  G+L DR+         P++  +R KIA   A GI +LH 
Sbjct: 94  ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRCKIAQGAANGINFLH- 150

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYLPPEYIA 120
                 + R++K +NIL  E   AK+ DF  + +  +   T +  R++GT  Y+ PE + 
Sbjct: 151 --ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEAL- 207

Query: 121 TGDCNEKCDVYSF--------------DGSRDSGHLTGRAW 147
            G+   K D+YSF              D  R+   L     
Sbjct: 208 RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKE 248

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  103 bits (258), Expect = 2e-27
 Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 17/138 (12%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L G C       LV EY E G+L + ++          T +  +   ++ + G+AYLH
Sbjct: 64  VKLYGAC--LNPVCLVMEYAEGGSLYNVLHGAEPL--PYYTAAHAMSWCLQCSQGVAYLH 119

Query: 61  VAFSRPIVFRNVKPSNILFQEQ-SVAKLFDFSYSESIPEGETRIRGRVM----GTFGYLP 115
               + ++ R++KP N+L     +V K+ DF        G        M    G+  ++ 
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAGGTVLKICDF--------GTACDIQTHMTNNKGSAAWMA 171

Query: 116 PEYIATGDCNEKCDVYSF 133
           PE     + +EKCDV+S+
Sbjct: 172 PEVFEGSNYSEKCDVFSW 189

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  100 bits (252), Expect = 1e-26
 Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 4/132 (3%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
             +G   +  N  +V EY+  G+L   ++  +    E +    RL +A ++A G+ YLH 
Sbjct: 98  LFMGAVTQPPNLSIVTEYLSRGSLYRLLH--KSGAREQLDERRRLSMAYDVAKGMNYLH- 154

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
             + PIV RN+K  N+L  ++   K+ DF  S          +    GT  ++ PE +  
Sbjct: 155 NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA-GTPEWMAPEVLRD 213

Query: 122 GDCNEKCDVYSF 133
              NEK DVYSF
Sbjct: 214 EPSNEKSDVYSF 225

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  100 bits (250), Expect = 3e-26
 Identities = 33/149 (22%), Positives = 58/149 (38%), Gaps = 23/149 (15%)

Query: 2   RLIGCCLETENPV----LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIA 57
           + IG      +      L+  + E G+L+D +          V+ +    IA  +A G+A
Sbjct: 82  QFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA------NVVSWNELCHIAETMARGLA 135

Query: 58  YLHVAFSR-------PIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GRVMG 109
           YLH             I  R++K  N+L +    A + DF  +     G++       +G
Sbjct: 136 YLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVG 195

Query: 110 TFGYLPPEYIATG-----DCNEKCDVYSF 133
           T  Y+ PE +        D   + D+Y+ 
Sbjct: 196 TRRYMAPEVLEGAINFQRDAFLRIDMYAM 224

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 98.1 bits (245), Expect = 7e-26
 Identities = 27/139 (19%), Positives = 55/139 (39%), Gaps = 19/139 (13%)

Query: 2   RLIGCCLE--TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
            ++G C      +P L+  ++ YG+L + +    +     V  S  +K A+++A G+A+L
Sbjct: 71  PVLGACQSPPAPHPTLITHWMPYGSLYNVL---HEGTNFVVDQSQAVKFALDMARGMAFL 127

Query: 60  HVAFSRPIVFRNVKPSNILFQEQSVAKL--FDFSYSESIPEGETRIRGRVMGTFGYLPPE 117
           H      I    +   +++  E   A++   D  +S              M    ++ PE
Sbjct: 128 H-TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ--------SPGRMYAPAWVAPE 178

Query: 118 YI---ATGDCNEKCDVYSF 133
            +            D++SF
Sbjct: 179 ALQKKPEDTNRRSADMWSF 197

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 97.0 bits (242), Expect = 3e-25
 Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 26/143 (18%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           +L G       P +V E+V  G L  R+         P+  S++L++ ++IA GI Y+  
Sbjct: 87  KLYGLM--HNPPRMVMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQ- 139

Query: 62  AFSRPIVFRNVKPSNILFQEQS-----VAKLFDFSYSESIPEGETRIRGRVM----GTFG 112
             + PIV R+++  NI  Q         AK+ DF        G ++     +    G F 
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF--------GLSQQSVHSVSGLLGNFQ 191

Query: 113 YLPPEYIATGD--CNEKCDVYSF 133
           ++ PE I   +    EK D YSF
Sbjct: 192 WMAPETIGAEEESYTEKADTYSF 214

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 93.1 bits (232), Expect = 6e-24
 Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 17/140 (12%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
            L G CL+  N  LV E+   G L   +   ++   +     + +  A++IA G+ YLH 
Sbjct: 70  ALRGVCLKEPNLCLVMEFARGGPLNRVL-SGKRIPPD-----ILVNWAVQIARGMNYLHD 123

Query: 62  AFSRPIVFRNVKPSNILFQEQS--------VAKLFDFSYSESIPEGETRIRGRVMGTFGY 113
               PI+ R++K SNIL  ++         + K+ DF  +               G + +
Sbjct: 124 EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM---SAAGAYAW 180

Query: 114 LPPEYIATGDCNEKCDVYSF 133
           + PE I     ++  DV+S+
Sbjct: 181 MAPEVIRASMFSKGSDVWSY 200

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 89.3 bits (222), Expect = 2e-22
 Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 12/136 (8%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
             +G         +V ++ E  +L   + H  +  FE       + IA + A G+ YLH 
Sbjct: 84  LFMGYSTA-PQLAIVTQWCEGSSLYHHL-HASETKFEM---KKLIDIARQTARGMDYLH- 137

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS-ESIPEGETRIRGRVMGTFGYLPPEYIA 120
             ++ I+ R++K +NI   E +  K+ DF  + E      +    ++ G+  ++ PE I 
Sbjct: 138 --AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195

Query: 121 TGD---CNEKCDVYSF 133
             D    + + DVY+F
Sbjct: 196 MQDSNPYSFQSDVYAF 211

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 89.7 bits (223), Expect = 2e-22
 Identities = 26/145 (17%), Positives = 54/145 (37%), Gaps = 21/145 (14%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
             +G C+   +  ++    +  TL   +    +   +    +   +IA EI  G+ YLH 
Sbjct: 93  LFMGACMSPPHLAIITSLCKGRTLYSVV-RDAKIVLDV---NKTRQIAQEIVKGMGYLH- 147

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM----GTFGYLPPE 117
             ++ I+ +++K  N+ +    V  + DF         +   R   +    G   +L PE
Sbjct: 148 --AKGILHKDLKSKNVFYDNGKV-VITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPE 204

Query: 118 YIATGD---------CNEKCDVYSF 133
            I              ++  DV++ 
Sbjct: 205 IIRQLSPDTEEDKLPFSKHSDVFAL 229

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 86.6 bits (215), Expect = 3e-21
 Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 20/145 (13%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           + IG   + +    + EY++ GTL   I             S R+  A +IA G+AYLH 
Sbjct: 71  KFIGVLYKDKRLNFITEYIKGGTLRGIIKSMD----SQYPWSQRVSFAKDIASGMAYLH- 125

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR-------------VM 108
             S  I+ R++   N L +E     + DF  +  + + +T+  G              V+
Sbjct: 126 --SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV 183

Query: 109 GTFGYLPPEYIATGDCNEKCDVYSF 133
           G   ++ PE I     +EK DV+SF
Sbjct: 184 GNPYWMAPEMINGRSYDEKVDVFSF 208

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 84.7 bits (210), Expect = 1e-20
 Identities = 34/151 (22%), Positives = 61/151 (40%), Gaps = 26/151 (17%)

Query: 2   RLIGCCLETENPV----LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIA 57
             I   + + +      L+  Y E G+L D +          +     L+I + IA G+A
Sbjct: 66  GFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT------TLDTVSCLRIVLSIASGLA 119

Query: 58  YLH-----VAFSRPIVFRNVKPSNILFQEQSVAKLFDF----SYSESIPEGETRIRGRVM 108
           +LH           I  R++K  NIL ++     + D      +S+S  + +     RV 
Sbjct: 120 HLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV- 178

Query: 109 GTFGYLPPE------YIATGDCNEKCDVYSF 133
           GT  Y+ PE       +   D  ++ D+++F
Sbjct: 179 GTKRYMAPEVLDETIQVDCFDSYKRVDIWAF 209

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 84.5 bits (209), Expect = 2e-20
 Identities = 29/157 (18%), Positives = 49/157 (31%), Gaps = 31/157 (19%)

Query: 2   RLIGCCLETENPV-----LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGI 56
           R I               LV EY   G+L   +                 ++A  +  G+
Sbjct: 71  RFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLH------TSDWVSSCRLAHSVTRGL 124

Query: 57  AYLH------VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRG----- 105
           AYLH        +   I  R++   N+L +      + DF  S  +        G     
Sbjct: 125 AYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNA 184

Query: 106 --RVMGTFGYLPPEYI-------ATGDCNEKCDVYSF 133
               +GT  Y+ PE +             ++ D+Y+ 
Sbjct: 185 AISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYAL 221

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 82.1 bits (203), Expect = 2e-19
 Identities = 33/151 (21%), Positives = 52/151 (34%), Gaps = 26/151 (17%)

Query: 2   RLIGCCLETENPV----LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIA 57
             I   ++         L+ +Y E G+L D +          +     LK+A     G+ 
Sbjct: 95  GFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST------TLDAKSMLKLAYSSVSGLC 148

Query: 58  YLH-----VAFSRPIVFRNVKPSNILFQEQSVAKLFDF----SYSESIPEGETRIRGRVM 108
           +LH           I  R++K  NIL ++     + D      +     E +     RV 
Sbjct: 149 HLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV- 207

Query: 109 GTFGYLPPE------YIATGDCNEKCDVYSF 133
           GT  Y+PPE                 D+YSF
Sbjct: 208 GTKRYMPPEVLDESLNRNHFQSYIMADMYSF 238

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 81.7 bits (202), Expect = 2e-19
 Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 26/151 (17%)

Query: 2   RLIGCCLETENPV----LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIA 57
             I    +         LV +Y E+G+L D +          VT    +K+A+  A G+A
Sbjct: 100 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLA 153

Query: 58  YLH-----VAFSRPIVFRNVKPSNILFQEQSVAKLFDFS----YSESIPEGETRIRGRVM 108
           +LH           I  R++K  NIL ++     + D      +  +    +     RV 
Sbjct: 154 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV- 212

Query: 109 GTFGYLPPE------YIATGDCNEKCDVYSF 133
           GT  Y+ PE       +   +  ++ D+Y+ 
Sbjct: 213 GTKRYMAPEVLDDSINMKHFESFKRADIYAM 243

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 78.1 bits (192), Expect = 5e-18
 Identities = 31/147 (21%), Positives = 51/147 (34%), Gaps = 19/147 (12%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           M+     L     VLV E   YGTL + I   +    + +   L +  AM + Y I  +H
Sbjct: 130 MKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH 189

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVA-----------KLFDFSYS---ESIPEGETRIRGR 106
                 I+  ++KP N +     +             L D   S   +  P+G       
Sbjct: 190 ---DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKC 246

Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
              T G+   E ++    N + D +  
Sbjct: 247 --ETSGFQCVEMLSNKPWNYQIDYFGV 271

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 71.6 bits (176), Expect = 9e-16
 Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 21/132 (15%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           +  EY E GTL D I H    N +        ++  +I   ++Y+H   S+ I+ R++KP
Sbjct: 92  IQMEYCENGTLYDLI-HSENLNQQRDEY---WRLFRQILEALSYIH---SQGIIHRDLKP 144

Query: 75  SNILFQEQSVAKLFDF-------------SYSESIPEGETRIRGRVMGTFGYLPPEYIA- 120
            NI   E    K+ DF                     G +      +GT  Y+  E +  
Sbjct: 145 MNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDG 204

Query: 121 TGDCNEKCDVYS 132
           TG  NEK D+YS
Sbjct: 205 TGHYNEKIDMYS 216

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 71.5 bits (175), Expect = 1e-15
 Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 16/128 (12%)

Query: 16  VFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS 75
             +      L D +              L   I ++IA  + +LH   S+ ++ R++KPS
Sbjct: 139 QMQLCRKENLKDWMNRRCSLEDREHGVCLH--IFIQIAEAVEFLH---SKGLMHRDLKPS 193

Query: 76  NILFQEQSVAKLFDF-----------SYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC 124
           NI F    V K+ DF             +   P          +GT  Y+ PE I   + 
Sbjct: 194 NIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNY 253

Query: 125 NEKCDVYS 132
           + K D++S
Sbjct: 254 SHKVDIFS 261

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 70.9 bits (174), Expect = 3e-15
 Identities = 48/175 (27%), Positives = 74/175 (42%), Gaps = 32/175 (18%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           M+L     +  N  LV E  + G L D I H R    E         I  ++  G+ YLH
Sbjct: 99  MKLYDFFEDKRNYYLVMECYKGGELFDEIIH-RMKFNEVDAA----VIIKQVLSGVTYLH 153

Query: 61  VAFSRPIVFRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPE 117
                 IV R++KP N+L +   + ++ K+ DF  S      + +++ R+ GT  Y+ PE
Sbjct: 154 ---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK-KMKERL-GTAYYIAPE 208

Query: 118 YIATGDCNEKCDVYS--------------FDGSRDSGH----LTGRAWYRSEDWK 154
            +     +EKCDV+S              F G  D         G+  + S +WK
Sbjct: 209 VL-RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWK 262

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 71.0 bits (174), Expect = 3e-15
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 17/120 (14%)

Query: 13  PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNV 72
             +V EYV   +L            + +  +  +   +EI   ++YLH   S  +V+ ++
Sbjct: 159 GYIVMEYVGGQSLKRSKG-------QKLPVAEAIAYLLEILPALSYLH---SIGLVYNDL 208

Query: 73  KPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYS 132
           KP NI+  E+ + KL D      I        G + GT G+  PE I         D+Y+
Sbjct: 209 KPENIMLTEEQL-KLIDLGAVSRI----NS-FGYLYGTPGFQAPE-IVRTGPTVATDIYT 261

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 70.5 bits (173), Expect = 4e-15
 Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 32/175 (18%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           M+L     +     LV E    G L D I   R+   E        +I  ++  GI Y+H
Sbjct: 89  MKLYEFFEDKGYFYLVGEVYTGGELFDEIIS-RKRFSEVDAA----RIIRQVLSGITYMH 143

Query: 61  VAFSRPIVFRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPE 117
                 IV R++KP N+L +   + +  ++ DF  S      + +++ ++ GT  Y+ PE
Sbjct: 144 ---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-KMKDKI-GTAYYIAPE 198

Query: 118 YIATGDCNEKCDVYS--------------FDGSRDSGH----LTGRAWYRSEDWK 154
            +  G  +EKCDV+S              F+G+ +         G+  +    WK
Sbjct: 199 VL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK 252

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 70.5 bits (173), Expect = 4e-15
 Identities = 49/161 (30%), Positives = 68/161 (42%), Gaps = 32/161 (19%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LV E+ E G L ++I + R    E         I  +I  GI YLH      IV R++KP
Sbjct: 123 LVTEFYEGGELFEQIIN-RHKFDECDAA----NIMKQILSGICYLH---KHNIVHRDIKP 174

Query: 75  SNILFQ---EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
            NIL +        K+ DF  S    +   ++R R+ GT  Y+ PE +     NEKCDV+
Sbjct: 175 ENILLENKNSLLNIKIVDFGLSSFFSKDY-KLRDRL-GTAYYIAPEVL-KKKYNEKCDVW 231

Query: 132 S--------------FDGSRDSGH----LTGRAWYRSEDWK 154
           S              F G  D         G+ ++   DWK
Sbjct: 232 SCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWK 272

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 69.3 bits (169), Expect = 1e-14
 Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 20/133 (15%)

Query: 9   ETENPVLVFEYVEYGTLADRIYHPRQPNF--EPVTCSLRLKIAMEIAYGIAYLHVAFSRP 66
             + P+L  EY E G L   +          E         +  +I+  + YLH      
Sbjct: 89  PNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI----RTLLSDISSALRYLH---ENR 141

Query: 67  IVFRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGE---TRIRGRVMGTFGYLPPEYIA 120
           I+ R++KP NI+ Q   ++ + K+ D  Y++ + +GE     +     GT  YL PE + 
Sbjct: 142 IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV-----GTLQYLAPELLE 196

Query: 121 TGDCNEKCDVYSF 133
                   D +SF
Sbjct: 197 QKKYTVTVDYWSF 209

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 67.8 bits (166), Expect = 2e-14
 Identities = 32/147 (21%), Positives = 60/147 (40%), Gaps = 19/147 (12%)

Query: 1   MRLIGCCLETENPV----LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGI 56
           +RL+  CL          L+  + + GTL + I    +     +T    L + + I  G+
Sbjct: 89  LRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIER-LKDKGNFLTEDQILWLLLGICRGL 147

Query: 57  AYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF-SYSESIPEGETRIRGRVM------- 108
             +H   ++    R++KP+NIL  ++    L D  S +++    E   +   +       
Sbjct: 148 EAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQR 204

Query: 109 GTFGYLPPEYIAT---GDCNEKCDVYS 132
            T  Y  PE  +       +E+ DV+S
Sbjct: 205 CTISYRAPELFSVQSHCVIDERTDVWS 231

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 68.2 bits (167), Expect = 3e-14
 Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 34/162 (20%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
           +V E    G L D I   ++  F E        +I  ++  GI Y+H      IV R++K
Sbjct: 98  IVGELYTGGELFDEI--IKRKRFSEHDAA----RIIKQVFSGITYMH---KHNIVHRDLK 148

Query: 74  PSNILFQ---EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDV 130
           P NIL +   +    K+ DF  S    +   +++ R+ GT  Y+ PE +  G  +EKCDV
Sbjct: 149 PENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKDRI-GTAYYIAPE-VLRGTYDEKCDV 205

Query: 131 YS--------------FDGSRDSGH----LTGRAWYRSEDWK 154
           +S              F G  +        TG+  +    W+
Sbjct: 206 WSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWR 247

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 67.3 bits (165), Expect = 3e-14
 Identities = 25/118 (21%), Positives = 44/118 (37%), Gaps = 8/118 (6%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           +    +    LA  +         P+     + I  +I   +   H   +     R+VKP
Sbjct: 111 VDMRLINGVDLAAML-----RRQGPLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKP 162

Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYS 132
            NIL      A L DF  + +  + +    G  +GT  Y+ PE  +      + D+Y+
Sbjct: 163 ENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYA 220

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 67.1 bits (164), Expect = 6e-14
 Identities = 32/142 (22%), Positives = 55/142 (38%), Gaps = 20/142 (14%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           R      + +   +  E     TL + +      +         + +  +   G+A+LH 
Sbjct: 82  RYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEP----ITLLQQTTSGLAHLH- 135

Query: 62  AFSRPIVFRNVKPSNILFQEQS-----VAKLFDFSYSESIPEGETRIRGR--VMGTFGYL 114
             S  IV R++KP NIL    +      A + DF   + +  G      R  V GT G++
Sbjct: 136 --SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWI 193

Query: 115 PPEYIATGDCN----EKCDVYS 132
            PE + + DC        D++S
Sbjct: 194 APEML-SEDCKENPTYTVDIFS 214

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 66.2 bits (162), Expect = 7e-14
 Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 8/118 (6%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           +  E+ + GTL   I    +   E +   L L++  +I  G+ Y+H   S+ ++ R++KP
Sbjct: 97  IQMEFCDKGTLEQWI---EKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKP 150

Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYS 132
           SNI   +    K+ DF    S+       R R  GT  Y+ PE I++ D  ++ D+Y+
Sbjct: 151 SNIFLVDTKQVKIGDFGLVTSL--KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYA 206

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 66.6 bits (162), Expect = 9e-14
 Identities = 19/135 (14%), Positives = 46/135 (34%), Gaps = 22/135 (16%)

Query: 12  NPVLVFE--YVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVF 69
           +   ++        T  + +        + +    RL++ +++   +A LH      +V 
Sbjct: 174 SRFFLYPRMQSNLQTFGEVLLS-HSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLVH 229

Query: 70  RNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC----- 124
             ++P +I+  ++    L  F +   + +G    R     + G+ PPE  A         
Sbjct: 230 TYLRPVDIVLDQRGGVFLTGFEH--LVRDGA---RVVSSVSRGFEPPELEARRATISYHR 284

Query: 125 ------NEKCDVYSF 133
                     D ++ 
Sbjct: 285 DRRTLMTFSFDAWAL 299

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 66.3 bits (162), Expect = 1e-13
 Identities = 31/153 (20%), Positives = 55/153 (35%), Gaps = 30/153 (19%)

Query: 6   CCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLR--LKIAMEIAYGIAYLHVA 62
           C   T+  + +  E      L D +      +           + +  +IA G+A+LH  
Sbjct: 76  CSETTDRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH-- 132

Query: 63  FSRPIVFRNVKPSNILF-------------QEQSVAKLFDFSYSESIPEGETRIRGRVM- 108
            S  I+ R++KP NIL               E     + DF   + +  G++  R  +  
Sbjct: 133 -SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNN 191

Query: 109 --GTFGYLPPEYIATGD-------CNEKCDVYS 132
             GT G+  PE +   +            D++S
Sbjct: 192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFS 224

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 65.8 bits (161), Expect = 1e-13
 Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 4/120 (3%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH--VAFSRPIVFRNV 72
           +V EY E G LA  I    +   + +     L++  ++   +   H        ++ R++
Sbjct: 84  IVMEYCEGGDLASVITKGTKER-QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDL 142

Query: 73  KPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYS 132
           KP+N+    +   KL DF  +  +    +  +  V GT  Y+ PE +     NEK D++S
Sbjct: 143 KPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNRMSYNEKSDIWS 201

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 65.7 bits (161), Expect = 1e-13
 Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 8/125 (6%)

Query: 9   ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
           E +   LV EY+E  TL++ I      +  P++    +    +I  GI + H      IV
Sbjct: 82  EDDCYYLVMEYIEGPTLSEYIE-----SHGPLSVDTAINFTNQILDGIKHAH---DMRIV 133

Query: 69  FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
            R++KP NIL       K+FDF  ++++ E        V+GT  Y  PE       +E  
Sbjct: 134 HRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECT 193

Query: 129 DVYSF 133
           D+YS 
Sbjct: 194 DIYSI 198

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 65.5 bits (160), Expect = 1e-13
 Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 16/128 (12%)

Query: 16  VFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS 75
             +      L D +           +  L   I ++IA  + +LH   S+ ++ R++KPS
Sbjct: 93  QMQLCRKENLKDWMNGRCTIEERERSVCLH--IFLQIAEAVEFLH---SKGLMHRDLKPS 147

Query: 76  NILFQEQSVAKLFDF-----------SYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC 124
           NI F    V K+ DF             +   P          +GT  Y+ PE I     
Sbjct: 148 NIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSY 207

Query: 125 NEKCDVYS 132
           + K D++S
Sbjct: 208 SHKVDIFS 215

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 64.6 bits (158), Expect = 3e-13
 Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 10/120 (8%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           +V EYV+  TL D ++        P+T    +++  +    + + H      I+ R+VKP
Sbjct: 93  IVMEYVDGVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKP 144

Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRI--RGRVMGTFGYLPPEYIATGDCNEKCDVYS 132
           +NI+    +  K+ DF  + +I +    +     V+GT  YL PE       + + DVYS
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 65.1 bits (158), Expect = 3e-13
 Identities = 18/134 (13%), Positives = 44/134 (32%), Gaps = 21/134 (15%)

Query: 12  NPVLVFEYVEYGTLADRI--YHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVF 69
           +   ++       L              + +    RL++ +++   +A LH      +V 
Sbjct: 179 SRFFLYPR-MQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLVH 234

Query: 70  RNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA--------- 120
             ++P +I+  ++    L  F +   + +G + +        G+ PPE  A         
Sbjct: 235 TYLRPVDIVLDQRGGVFLTGFEH--LVRDGASAV---SPIGRGFAPPETTAERMLPFGQH 289

Query: 121 -TGDCNEKCDVYSF 133
                    D ++ 
Sbjct: 290 HPTLMTFAFDTWTL 303

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 64.9 bits (158), Expect = 3e-13
 Identities = 33/141 (23%), Positives = 52/141 (36%), Gaps = 29/141 (20%)

Query: 9   ETENPVLVFEYVEYGTLADRIYHPRQPNF--EPVTCSLRLKIAMEIAYGIAYLHVAFSRP 66
            T + VL+ E+   G+L   +  P       E         +  ++  G+ +L       
Sbjct: 80  TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFL----IVLRDVVGGMNHLR---ENG 132

Query: 67  IVFRNVKPSNILFQ----EQSVAKLFDFSYSESIPEGE---TRIRGRVMGTFGYLPPEYI 119
           IV RN+KP NI+       QSV KL DF  +  + + E   +       GT  YL P+  
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLY-----GTEEYLHPDMY 187

Query: 120 ATGDC--------NEKCDVYS 132
                            D++S
Sbjct: 188 ERAVLRKDHQKKYGATVDLWS 208

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 64.0 bits (156), Expect = 6e-13
 Identities = 33/142 (23%), Positives = 52/142 (36%), Gaps = 29/142 (20%)

Query: 9   ETENPVLVFEYVEYGTLADRIYHPRQPNF--EPVTCSLRLKIAMEIAYGIAYLHVAFSRP 66
            T + VL+ E+   G+L   +  P       E         +  ++  G+ +L       
Sbjct: 80  TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFL----IVLRDVVGGMNHLR---ENG 132

Query: 67  IVFRNVKPSNILFQ----EQSVAKLFDFSYSESIPEGE---TRIRGRVMGTFGYLPPEYI 119
           IV RN+KP NI+       QSV KL DF  +  + + E   +       GT  YL P+  
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLY-----GTEEYLHPDMY 187

Query: 120 ATGDC--------NEKCDVYSF 133
                            D++S 
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSI 209

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 63.9 bits (156), Expect = 6e-13
 Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 19/144 (13%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLAD-----RIYHPRQPNFEPVTCSLRLKIAMEIAYG 55
           +RL+G   + +  +++ E +  G L       R      P   P + S  +++A EIA G
Sbjct: 91  VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 150

Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYL 114
           +AYL+   +   V R++   N +  E    K+ DF  +  I E +  R  G+     G L
Sbjct: 151 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK-----GLL 202

Query: 115 P-----PEYIATGDCNEKCDVYSF 133
           P     PE +  G      DV+SF
Sbjct: 203 PVRWMSPESLKDGVFTTYSDVWSF 226

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 64.3 bits (156), Expect = 6e-13
 Identities = 17/127 (13%), Positives = 31/127 (24%), Gaps = 14/127 (11%)

Query: 12  NPVLVFEYVEYGTLADRI--YHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVF 69
           N +L+        L                        +  ++    A L    S+ +V 
Sbjct: 162 NYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLVH 217

Query: 70  RNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM-GTFGYLPPEYIATGDC--NE 126
            +  P N+         L D S    +       RG        Y P E++         
Sbjct: 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGT-----RGPASSVPVTYAPREFLNASTATFTH 272

Query: 127 KCDVYSF 133
             + +  
Sbjct: 273 ALNAWQL 279

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 63.5 bits (155), Expect = 1e-12
 Identities = 35/168 (20%), Positives = 57/168 (33%), Gaps = 31/168 (18%)

Query: 9   ETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI 67
             E    L+F+ V  G L + I   R+   E            +I   + + H      +
Sbjct: 80  SEEGHHYLIFDLVTGGELFEDIVA-REYYSEADAS----HCIQQILEAVLHCH---QMGV 131

Query: 68  VFRNVKPSNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC 124
           V RN+KP N+L     + +  KL DF  +  +   +    G   GT GYL PE +     
Sbjct: 132 VHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA-GTPGYLSPEVLRKDPY 190

Query: 125 NEKCDVYS--------------FDGSRDSGH----LTGRAWYRSEDWK 154
            +  D+++              F              G   + S +W 
Sbjct: 191 GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWD 238

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 63.2 bits (154), Expect = 1e-12
 Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 7/131 (5%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           +      E  +  +V +Y E G L  RI                L   ++I   + ++H 
Sbjct: 87  QYRESFEENGSLYIVMDYCEGGDLFKRI---NAQKGVLFQEDQILDWFVQICLALKHVH- 142

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
              R I+ R++K  NI   +    +L DF  +  +       R  + GT  YL PE    
Sbjct: 143 --DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACI-GTPYYLSPEICEN 199

Query: 122 GDCNEKCDVYS 132
              N K D+++
Sbjct: 200 KPYNNKSDIWA 210

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 62.1 bits (151), Expect = 3e-12
 Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 12/138 (8%)

Query: 1   MRLIGCCLETENPV-LVFEYVEYGTLADRI---YHPRQPNFEPVTCSLRLKIAMEIAYGI 56
           +   G  +   + V +++EY+E  ++       +   +     +   +   I   +    
Sbjct: 106 LTCEGI-ITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSF 164

Query: 57  AYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPP 116
           +Y+H    + I  R+VKPSNIL  +    KL DF  SE + + + +      GT+ ++PP
Sbjct: 165 SYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIK---GSRGTYEFMPP 219

Query: 117 EYIATGDC--NEKCDVYS 132
           E+ +        K D++S
Sbjct: 220 EFFSNESSYNGAKVDIWS 237

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 61.6 bits (150), Expect = 3e-12
 Identities = 30/131 (22%), Positives = 56/131 (42%), Gaps = 5/131 (3%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           +     +E     +V E  + G L+  I H ++     +      K  +++   + ++H 
Sbjct: 96  KYYASFIEDNELNIVLELADAGDLSRMIKHFKKQK-RLIPERTVWKYFVQLCSALEHMH- 153

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
             SR ++ R++KP+N+      V KL D          +T     ++GT  Y+ PE I  
Sbjct: 154 --SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF-SSKTTAAHSLVGTPYYMSPERIHE 210

Query: 122 GDCNEKCDVYS 132
              N K D++S
Sbjct: 211 NGYNFKSDIWS 221

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 61.9 bits (151), Expect = 4e-12
 Identities = 29/131 (22%), Positives = 49/131 (37%), Gaps = 15/131 (11%)

Query: 9   ETENPV-LVFEYVEYGTLADRI---YHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
            ++  + +VFE+++   L   I           E V          +I   + Y H    
Sbjct: 96  SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVAS----HYMRQILEALRYCH---D 148

Query: 65  RPIVFRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
             I+ R+VKP  +L       +  KL  F  +  + E      GRV GT  ++ PE +  
Sbjct: 149 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPHFMAPEVVKR 207

Query: 122 GDCNEKCDVYS 132
               +  DV+ 
Sbjct: 208 EPYGKPVDVWG 218

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 61.9 bits (151), Expect = 4e-12
 Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 18/138 (13%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           RLIG C + +   +V E V+ G     +    +     +     L++  + A G+ YL  
Sbjct: 176 RLIGVCTQKQPIYIVMELVQGGDFLTFL----RTEGARLRVKTLLQMVGDAAAGMEYLE- 230

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYLP----- 115
             S+  + R++   N L  E++V K+ DF  S    +G      G        +P     
Sbjct: 231 --SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGL-----RQVPVKWTA 283

Query: 116 PEYIATGDCNEKCDVYSF 133
           PE +  G  + + DV+SF
Sbjct: 284 PEALNYGRYSSESDVWSF 301

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 61.6 bits (150), Expect = 4e-12
 Identities = 37/143 (25%), Positives = 51/143 (35%), Gaps = 19/143 (13%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLAD--RIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
           R IG  L++    ++ E +  G L    R   PR      +     L +A +IA G  YL
Sbjct: 97  RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156

Query: 60  HVAFSRPIVFRNVKPSNIL---FQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYLP 115
                   + R++   N L        VAK+ DF  +  I      R  G        LP
Sbjct: 157 E---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC-----AMLP 208

Query: 116 -----PEYIATGDCNEKCDVYSF 133
                PE    G    K D +SF
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSF 231

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 61.4 bits (149), Expect = 6e-12
 Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 10/116 (8%)

Query: 18  EYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNI 77
           E+++ G+L D++        E +      K+++ +  G+ YL       I+ R+VKPSNI
Sbjct: 111 EHMDGGSL-DQVLKKAGRIPEQILG----KVSIAVIKGLTYLRE--KHKIMHRDVKPSNI 163

Query: 78  LFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
           L   +   KL DF  S  +      +    +GT  Y+ PE +     + + D++S 
Sbjct: 164 LVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 216

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 61.2 bits (149), Expect = 6e-12
 Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 12/121 (9%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           ++ E +E G L  RI       F     +   +I  +I   I +LH   S  I  R+VKP
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAA---EIMRDIGTAIQFLH---SHNIAHRDVKP 156

Query: 75  SNILFQ---EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
            N+L+    + +V KL DF +++   +    ++     T  Y+ PE +     ++ CD++
Sbjct: 157 ENLLYTSKEKDAVLKLTDFGFAKETTQNA--LQTPC-YTPYYVAPEVLGPEKYDKSCDMW 213

Query: 132 S 132
           S
Sbjct: 214 S 214

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 60.8 bits (148), Expect = 6e-12
 Identities = 30/138 (21%), Positives = 53/138 (38%), Gaps = 15/138 (10%)

Query: 1   MRLIGCCLET--ENPVLVF--EYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGI 56
           +R       T      +V   E +  GTL   +       F+ +   +      +I  G+
Sbjct: 88  VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYL-----KRFKVMKIKVLRSWCRQILKGL 142

Query: 57  AYLHVAFSRPIVFRNVKPSNILFQEQS-VAKLFDFSYSESIPEGETRIRGRVMGTFGYLP 115
            +LH   + PI+ R++K  NI     +   K+ D   +        +    V+GT  ++ 
Sbjct: 143 QFLH-TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK---AVIGTPEFMA 198

Query: 116 PEYIATGDCNEKCDVYSF 133
           PE       +E  DVY+F
Sbjct: 199 PEMYEEK-YDESVDVYAF 215

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 60.8 bits (148), Expect = 7e-12
 Identities = 43/168 (25%), Positives = 63/168 (37%), Gaps = 32/168 (19%)

Query: 9   ETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI 67
           + E+   LVF+ V  G L + I   R+   E            +I   IAY H   S  I
Sbjct: 98  QEESFHYLVFDLVTGGELFEDIVA-REFYSEADAS----HCIQQILESIAYCH---SNGI 149

Query: 68  VFRNVKPSNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC 124
           V RN+KP N+L     + +  KL DF  +  + + E    G   GT GYL PE +     
Sbjct: 150 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE-AWHGFA-GTPGYLSPEVLKKDPY 207

Query: 125 NEKCDVYS--------------FDGSRDSGH----LTGRAWYRSEDWK 154
           ++  D+++              F              G   Y S +W 
Sbjct: 208 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWD 255

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 60.8 bits (148), Expect = 8e-12
 Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 15/129 (11%)

Query: 9   ETENPV-LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAFSRP 66
             +    LV E +  G L +RI   ++ +F E         I  ++   ++++H      
Sbjct: 76  HDQLHTFLVMELLNGGELFERIK--KKKHFSETEAS----YIMRKLVSAVSHMH---DVG 126

Query: 67  IVFRNVKPSNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
           +V R++KP N+LF    +    K+ DF ++   P     ++     T  Y  PE +    
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC-FTLHYAAPELLNQNG 185

Query: 124 CNEKCDVYS 132
            +E CD++S
Sbjct: 186 YDESCDLWS 194

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 60.9 bits (148), Expect = 8e-12
 Identities = 37/143 (25%), Positives = 51/143 (35%), Gaps = 19/143 (13%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLAD--RIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
           R IG  L++    ++ E +  G L    R   PR      +     L +A +IA G  YL
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197

Query: 60  HVAFSRPIVFRNVKPSNIL---FQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYLP 115
                   + R++   N L        VAK+ DF  +  I      R  G        LP
Sbjct: 198 E---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGC-----AMLP 249

Query: 116 -----PEYIATGDCNEKCDVYSF 133
                PE    G    K D +SF
Sbjct: 250 VKWMPPEAFMEGIFTSKTDTWSF 272

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 60.3 bits (147), Expect = 1e-11
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 15/130 (11%)

Query: 9   ETENPV-LVFEYVEYGTLADRI--YHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
           E  + + +V E  E G L +RI     R         +   ++  ++   +AY H   S+
Sbjct: 90  EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVA---ELMKQMMNALAYFH---SQ 143

Query: 66  PIVFRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG 122
            +V +++KP NILFQ     S  K+ DF  +E     E        GT  Y+ PE +   
Sbjct: 144 HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE-HSTNAA-GTALYMAPE-VFKR 200

Query: 123 DCNEKCDVYS 132
           D   KCD++S
Sbjct: 201 DVTFKCDIWS 210

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 60.0 bits (146), Expect = 1e-11
 Identities = 29/144 (20%), Positives = 53/144 (36%), Gaps = 22/144 (15%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL    +  +   +V E      L   +        + +    R      +   +  +H
Sbjct: 91  IRLYDYEITDQYIYMVMECGN-IDLNSWLK-----KKKSIDPWERKSYWKNMLEAVHTIH 144

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRI-RGRVMGTFGYLPPEYI 119
                 IV  ++KP+N L  +  + KL DF  +  +    T + +   +GT  Y+PPE I
Sbjct: 145 ---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 200

Query: 120 -----------ATGDCNEKCDVYS 132
                      +    + K DV+S
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWS 224

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 59.7 bits (145), Expect = 2e-11
 Identities = 29/144 (20%), Positives = 53/144 (36%), Gaps = 22/144 (15%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL    +  +   +V E      L   +        + +    R      +   +  +H
Sbjct: 72  IRLYDYEITDQYIYMVMECGN-IDLNSWLK-----KKKSIDPWERKSYWKNMLEAVHTIH 125

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRI-RGRVMGTFGYLPPEYI 119
                 IV  ++KP+N L  +  + KL DF  +  +    T + +   +GT  Y+PPE I
Sbjct: 126 ---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 181

Query: 120 -----------ATGDCNEKCDVYS 132
                      +    + K DV+S
Sbjct: 182 KDMSSSRENGKSKSKISPKSDVWS 205

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 59.6 bits (145), Expect = 2e-11
 Identities = 30/132 (22%), Positives = 43/132 (32%), Gaps = 13/132 (9%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           RL     E     L  E     +L            E            +    +A+LH 
Sbjct: 121 RLEQAWEEGGILYLQTELCG-PSLQQHCEAWGASLPEAQVW----GYLRDTLLALAHLH- 174

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM-GTFGYLPPEYIA 120
             S+ +V  +VKP+NI    +   KL DF     +          V  G   Y+ PE + 
Sbjct: 175 --SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG---EVQEGDPRYMAPE-LL 228

Query: 121 TGDCNEKCDVYS 132
            G      DV+S
Sbjct: 229 QGSYGTAADVFS 240

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 59.7 bits (145), Expect = 2e-11
 Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 13/122 (10%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
           +V E ++ G L  RI       F E        +I   I   I YLH   S  I  R+VK
Sbjct: 136 IVMECLDGGELFSRIQDRGDQAFTEREAS----EIMKSIGEAIQYLH---SINIAHRDVK 188

Query: 74  PSNILFQ---EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDV 130
           P N+L+      ++ KL DF +++        +      T  Y+ PE +     ++ CD+
Sbjct: 189 PENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPC-YTPYYVAPEVLGPEKYDKSCDM 246

Query: 131 YS 132
           +S
Sbjct: 247 WS 248

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 59.1 bits (144), Expect = 2e-11
 Identities = 41/169 (24%), Positives = 63/169 (37%), Gaps = 35/169 (20%)

Query: 9   ETENPV-LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAFSRP 66
           E    + LV E    G L +R+    +  F E        +I  ++   +AY H      
Sbjct: 76  EDNTDIYLVMELCTGGELFERV--VHKRVFRESDAA----RIMKDVLSAVAYCH---KLN 126

Query: 67  IVFRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
           +  R++KP N LF      S  KL DF  +     G+  +R +V GT  Y+ P+ +  G 
Sbjct: 127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK-MMRTKV-GTPYYVSPQ-VLEGL 183

Query: 124 CNEKCDVYS--------------FDGSRDSGH----LTGRAWYRSEDWK 154
              +CD +S              F    DS        G   +  +DW 
Sbjct: 184 YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWL 232

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 59.2 bits (144), Expect = 3e-11
 Identities = 40/131 (30%), Positives = 57/131 (43%), Gaps = 17/131 (12%)

Query: 9   ETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI 67
           ET     LVF+ ++ G L D +   +    E  T     KI   +   I  LH      I
Sbjct: 94  ETNTFFFLVFDLMKKGELFDYLTE-KVTLSEKETR----KIMRALLEVICALH---KLNI 145

Query: 68  VFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC--- 124
           V R++KP NIL  +    KL DF +S  +  GE ++R    GT  YL PE I        
Sbjct: 146 VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE-KLREVC-GTPSYLAPEIIECSMNDNH 203

Query: 125 ---NEKCDVYS 132
               ++ D++S
Sbjct: 204 PGYGKEVDMWS 214

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 59.1 bits (143), Expect = 3e-11
 Identities = 28/144 (19%), Positives = 52/144 (36%), Gaps = 22/144 (15%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL    +  +   +V E      L   +        + +    R      +   +  +H
Sbjct: 119 IRLYDYEITDQYIYMVMECGN-IDLNSWLK-----KKKSIDPWERKSYWKNMLEAVHTIH 172

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRI-RGRVMGTFGYLPPEYI 119
                 IV  ++KP+N L  +  + KL DF  +  +    T + +   +G   Y+PPE I
Sbjct: 173 ---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAI 228

Query: 120 -----------ATGDCNEKCDVYS 132
                      +    + K DV+S
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWS 252

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 58.8 bits (143), Expect = 3e-11
 Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 17/139 (12%)

Query: 2   RLIGCCLETENPVL-VFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
            L+G CL +E   L V  Y+++G L + I   R     P    L +   +++A G+ YL 
Sbjct: 90  SLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDL-IGFGLQVAKGMKYLA 145

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLP---- 115
              S+  V R++   N +  E+   K+ DF  +  + + E   +  +   T   LP    
Sbjct: 146 ---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK---TGAKLPVKWM 199

Query: 116 -PEYIATGDCNEKCDVYSF 133
             E + T     K DV+SF
Sbjct: 200 ALESLQTQKFTTKSDVWSF 218

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 58.8 bits (143), Expect = 3e-11
 Identities = 44/169 (26%), Positives = 70/169 (41%), Gaps = 35/169 (20%)

Query: 9   ETENPV-LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAFSRP 66
           E  +   +V E    G L D I   ++  F E        +I  ++  GI Y+H      
Sbjct: 91  EDSSSFYIVGELYTGGELFDEI--IKRKRFSEHDAA----RIIKQVFSGITYMH---KHN 141

Query: 67  IVFRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
           IV R++KP NIL +   +    K+ DF  S    +   +++ R+ GT  Y+ PE +  G 
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKDRI-GTAYYIAPE-VLRGT 198

Query: 124 CNEKCDVYS--------------FDGSRDSGH----LTGRAWYRSEDWK 154
            +EKCDV+S              F G  +        TG+  +    W+
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWR 247

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 59.0 bits (143), Expect = 3e-11
 Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 6/132 (4%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           +L+G C       ++ E++ YG L D   + R+ N + V+  + L +A +I+  + YL  
Sbjct: 280 QLLGVCTREPPFYIITEFMTYGNLLD---YLRECNRQEVSAVVLLYMATQISSAMEYLE- 335

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
              +  + RN+   N L  E  + K+ DF  S  +                +  PE +A 
Sbjct: 336 --KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 393

Query: 122 GDCNEKCDVYSF 133
              + K DV++F
Sbjct: 394 NKFSIKSDVWAF 405

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 58.3 bits (142), Expect = 4e-11
 Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 14/128 (10%)

Query: 9   ETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI 67
           + E+   LVF+ V  G L + I   R+   E            +I   IAY H   S  I
Sbjct: 75  QEESFHYLVFDLVTGGELFEDIVA-REFYSEADAS----HCIQQILESIAYCH---SNGI 126

Query: 68  VFRNVKPSNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC 124
           V RN+KP N+L     + +  KL DF  +  + + E    G   GT GYL PE +     
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE-AWHGFA-GTPGYLSPEVLKKDPY 184

Query: 125 NEKCDVYS 132
           ++  D+++
Sbjct: 185 SKPVDIWA 192

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 58.5 bits (142), Expect = 5e-11
 Identities = 40/148 (27%), Positives = 58/148 (39%), Gaps = 24/148 (16%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTL----------ADRIYHPRQPNFEPVTCSLRLKIAME 51
           R  G C E    ++VFEY+ +G L          A  +         P+     L +A +
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166

Query: 52  IAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGT 110
           +A G+ YL        V R++   N L  +  V K+ DF  S  I   +  R+ GR    
Sbjct: 167 VAAGMVYLA---GLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGR---- 219

Query: 111 FGYLP-----PEYIATGDCNEKCDVYSF 133
              LP     PE I       + DV+SF
Sbjct: 220 -TMLPIRWMPPESILYRKFTTESDVWSF 246

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 58.6 bits (142), Expect = 5e-11
 Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 16/130 (12%)

Query: 9   ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
           + E+  +V E +E G L D++    +   E            ++   + YLH      I+
Sbjct: 210 DAEDYYIVLELMEGGELFDKVVG-NKRLKEATCK----LYFYQMLLAVQYLH---ENGII 261

Query: 69  FRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC- 124
            R++KP N+L     E  + K+ DF +S+ + E    +R    GT  YL PE + +    
Sbjct: 262 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS-LMRTLC-GTPTYLAPEVLVSVGTA 319

Query: 125 --NEKCDVYS 132
             N   D +S
Sbjct: 320 GYNRAVDCWS 329

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 58.5 bits (142), Expect = 6e-11
 Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 14/128 (10%)

Query: 9   ETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI 67
           ET   + LV E V  G L DRI   +    E            +I   +AYLH      I
Sbjct: 118 ETPTEISLVLELVTGGELFDRIVE-KGYYSERDAA----DAVKQILEAVAYLH---ENGI 169

Query: 68  VFRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC 124
           V R++KP N+L+      +  K+ DF  S+ +      ++    GT GY  PE +     
Sbjct: 170 VHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV-LMKTVC-GTPGYCAPEILRGCAY 227

Query: 125 NEKCDVYS 132
             + D++S
Sbjct: 228 GPEVDMWS 235

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 58.0 bits (141), Expect = 6e-11
 Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 17/129 (13%)

Query: 9   ETENPV-LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAFSRP 66
           E+     LV + V  G L DRI    +  + E         +  ++   + YLH      
Sbjct: 76  ESTTHYYLVMQLVSGGELFDRIL--ERGVYTEKDAS----LVIQQVLSAVKYLH---ENG 126

Query: 67  IVFRNVKPSNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
           IV R++KP N+L+   +E S   + DF  S+    G         GT GY+ PE +A   
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS---TACGTPGYVAPEVLAQKP 183

Query: 124 CNEKCDVYS 132
            ++  D +S
Sbjct: 184 YSKAVDCWS 192

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 57.6 bits (140), Expect = 9e-11
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 13/119 (10%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
           L+ EY   GT+   +   +   F E  T         E+A  ++Y H   S+ ++ R++K
Sbjct: 86  LILEYAPLGTVYRELQ--KLSKFDEQRTA----TYITELANALSYCH---SKRVIHRDIK 136

Query: 74  PSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYS 132
           P N+L       K+ DF +S   P   +  R  + GT  YLPPE I     +EK D++S
Sbjct: 137 PENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWS 192

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 57.9 bits (140), Expect = 9e-11
 Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 11/130 (8%)

Query: 6   CCLETENPV-LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAF 63
              ET++ + LV   +  G L   IYH  Q  F E          A EI  G+  LH   
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARA---VFYAA-EICCGLEDLH--- 303

Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
              IV+R++KP NIL  +    ++ D   +  +PEG+T I+GRV GT GY+ PE +    
Sbjct: 304 RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEVVKNER 361

Query: 124 CNEKCDVYSF 133
                D ++ 
Sbjct: 362 YTFSPDWWAL 371

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 57.3 bits (139), Expect = 1e-10
 Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 16/130 (12%)

Query: 9   ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
           + E+  +V E +E G L D++    +   E            ++   + YLH      I+
Sbjct: 85  DAEDYYIVLELMEGGELFDKVVG-NKRLKEATCK----LYFYQMLLAVQYLH---ENGII 136

Query: 69  FRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC- 124
            R++KP N+L     E  + K+ DF +S+ + E    +R    GT  YL PE + +    
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS-LMRTLC-GTPTYLAPEVLVSVGTA 194

Query: 125 --NEKCDVYS 132
             N   D +S
Sbjct: 195 GYNRAVDCWS 204

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 57.4 bits (139), Expect = 1e-10
 Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 8/131 (6%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           +  G   +  +  +V EY   G+++D I   R         +    I      G+ YLH 
Sbjct: 88  KYYGSYFKNTDLWIVMEYCGAGSVSD-IIRLRNKTLTEDEIAT---ILQSTLKGLEYLH- 142

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
                 + R++K  NIL   +  AKL DF  +  + +   + R  V+GT  ++ PE I  
Sbjct: 143 --FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAK-RNTVIGTPFWMAPEVIQE 199

Query: 122 GDCNEKCDVYS 132
              N   D++S
Sbjct: 200 IGYNCVADIWS 210

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 57.1 bits (138), Expect = 2e-10
 Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 15/139 (10%)

Query: 1   MRLIGCCLETENPVL-VFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
           + L+G CL +E   L V  Y+++G L + I   R     P    L +   +++A G+ +L
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDL-IGFGLQVAKGMKFL 208

Query: 60  HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLP---- 115
               S+  V R++   N +  E+   K+ DF  +  + + E         T   LP    
Sbjct: 209 A---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN--KTGAKLPVKWM 263

Query: 116 -PEYIATGDCNEKCDVYSF 133
             E + T     K DV+SF
Sbjct: 264 ALESLQTQKFTTKSDVWSF 282

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 57.0 bits (138), Expect = 2e-10
 Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 17/131 (12%)

Query: 9   ETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI 67
           E+ + + LVF+ +  G L D +   +    E  T      I   +   +++LH   +  I
Sbjct: 170 ESSSFMFLVFDLMRKGELFDYLTE-KVALSEKETR----SIMRSLLEAVSFLH---ANNI 221

Query: 68  VFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC--- 124
           V R++KP NIL  +    +L DF +S  +  GE ++R    GT GYL PE +        
Sbjct: 222 VHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE-KLRELC-GTPGYLAPEILKCSMDETH 279

Query: 125 ---NEKCDVYS 132
               ++ D+++
Sbjct: 280 PGYGKEVDLWA 290

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 57.1 bits (138), Expect = 2e-10
 Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 9/133 (6%)

Query: 2   RLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +L      +E P+ +V EY+  G+L D +   +    + +     + +A +IA G+AY+ 
Sbjct: 243 QLYAVV--SEEPIYIVTEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASGMAYVE 297

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
                  V R+++ +NIL  E  V K+ DF  +  I + E   R        +  PE   
Sbjct: 298 ---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 354

Query: 121 TGDCNEKCDVYSF 133
            G    K DV+SF
Sbjct: 355 YGRFTIKSDVWSF 367

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 56.9 bits (138), Expect = 2e-10
 Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 16/130 (12%)

Query: 9   ETENPV-LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAFSRP 66
           +    V +V E ++ G L D+I   RQ  F E         +   I   + YLH   ++ 
Sbjct: 86  DDGKYVYVVTELMKGGELLDKIL--RQKFFSEREAS----AVLFTITKTVEYLH---AQG 136

Query: 67  IVFRNVKPSNILFQEQ----SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG 122
           +V R++KPSNIL+ ++       ++ DF +++ +      +      T  ++ PE +   
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPC-YTANFVAPEVLERQ 195

Query: 123 DCNEKCDVYS 132
             +  CD++S
Sbjct: 196 GYDAACDIWS 205

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 56.8 bits (137), Expect = 3e-10
 Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 9/133 (6%)

Query: 2   RLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +L      +E P+ +V EY+  G+L D +   +    + +     + +A +IA G+AY+ 
Sbjct: 326 QLYAVV--SEEPIYIVTEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASGMAYVE 380

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
                  V R+++ +NIL  E  V K+ DF  +  I + E   R        +  PE   
Sbjct: 381 ---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 437

Query: 121 TGDCNEKCDVYSF 133
            G    K DV+SF
Sbjct: 438 YGRFTIKSDVWSF 450

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 56.1 bits (135), Expect = 4e-10
 Identities = 26/127 (20%), Positives = 44/127 (34%), Gaps = 14/127 (11%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           +V  ++ YG+  D I          +  +  L+    +   + Y+H       V R+VK 
Sbjct: 103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQ---GVLKALDYIH---HMGYVHRSVKA 156

Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM------GTFGYLPPEYIATGDC--NE 126
           S+IL        L     + S+     R R              +L PE +       + 
Sbjct: 157 SHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDA 216

Query: 127 KCDVYSF 133
           K D+YS 
Sbjct: 217 KSDIYSV 223

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 55.8 bits (135), Expect = 4e-10
 Identities = 34/135 (25%), Positives = 51/135 (37%), Gaps = 13/135 (9%)

Query: 4   IGCCLETENPVLVFEYVEYGTLAD--RIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           +G   E     +  E V  G+L+   R       + E            +I  G+ YLH 
Sbjct: 85  LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF----YTKQILEGLKYLH- 139

Query: 62  AFSRPIVFRNVKPSNILFQEQS-VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI- 119
                IV R++K  N+L    S V K+ DF  S+ +  G         GT  Y+ PE I 
Sbjct: 140 --DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIID 196

Query: 120 -ATGDCNEKCDVYSF 133
                  +  D++S 
Sbjct: 197 KGPRGYGKAADIWSL 211

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 55.7 bits (135), Expect = 4e-10
 Identities = 31/129 (24%), Positives = 48/129 (37%), Gaps = 14/129 (10%)

Query: 9   ETENPV-LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAFSRP 66
           E  + + L+ EY   G +             E        ++  +I  G+ YLH      
Sbjct: 99  ENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVI----RLIKQILEGVYYLH---QNN 151

Query: 67  IVFRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
           IV  ++KP NIL          K+ DF  S  I      +R  + GT  YL PE +    
Sbjct: 152 IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC-ELREIM-GTPEYLAPEILNYDP 209

Query: 124 CNEKCDVYS 132
                D+++
Sbjct: 210 ITTATDMWN 218

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 55.7 bits (134), Expect = 7e-10
 Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 14/119 (11%)

Query: 6   CCLETENPV-LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAF 63
               T + +  + + +  G L   +   +   F E      R   A EI  G+ ++H   
Sbjct: 259 YAFHTPDKLSFILDLMNGGDLHYHLS--QHGVFSEADM---RFYAA-EIILGLEHMH--- 309

Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG 122
           +R +V+R++KP+NIL  E    ++ D   +    + +      V GT GY+ PE +  G
Sbjct: 310 NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP--HASV-GTHGYMAPEVLQKG 365

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 54.9 bits (133), Expect = 8e-10
 Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 25/149 (16%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLAD-----------RIYHPRQPNFEPVTCSLRLKIAM 50
           +  G C + +  ++VFEY+++G L              +    +     +  S  L IA 
Sbjct: 81  KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140

Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMG 109
           +IA G+ YL    S+  V R++   N L     + K+ DF  S  +   +  R+ G  M 
Sbjct: 141 QIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM- 196

Query: 110 TFGYLP-----PEYIATGDCNEKCDVYSF 133
               LP     PE I       + DV+SF
Sbjct: 197 ----LPIRWMPPESIMYRKFTTESDVWSF 221

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 54.6 bits (132), Expect = 9e-10
 Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 10/119 (8%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           +V EY+  G+L D +      +   +    R     E    + +LH   S  ++ R++K 
Sbjct: 94  VVMEYLAGGSLTD-VVTETCMDEGQIAAVCR-----ECLQALEFLH---SNQVIHRDIKS 144

Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
            NIL       KL DF +   I   +++ R  ++GT  ++ PE +       K D++S 
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 202

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 55.2 bits (133), Expect = 9e-10
 Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 12/118 (10%)

Query: 6   CCLETENPV-LVFEYVEYGTLADRIYHP--RQPNF-EPVTCSLRLKIAMEIAYGIAYLHV 61
              ET+  + LV   +  G +   IY+     P F EP         A +I  G+ +LH 
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA---IFYTA-QIVSGLEHLH- 306

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
              R I++R++KP N+L  +    ++ D   +  +  G+T+ +G   GT G++ PE +
Sbjct: 307 --QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GTPGFMAPELL 361

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 54.6 bits (132), Expect = 1e-09
 Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 24/149 (16%)

Query: 2   RLIGCCLETENPVLV-FEYVEYGTL-----------ADRIYHPRQPNFEPVTCSLRLKIA 49
            L+G C +   P++V  E+ ++G L                 P     + +T    +  +
Sbjct: 95  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154

Query: 50  MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMG 109
            ++A G+ +L    SR  + R++   NIL  E++V K+ DF  +  I +    +R     
Sbjct: 155 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR----K 207

Query: 110 TFGYLP-----PEYIATGDCNEKCDVYSF 133
               LP     PE I       + DV+SF
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSF 236

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 54.6 bits (132), Expect = 1e-09
 Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 11/136 (8%)

Query: 2   RLIGCCLETE-NPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
           +  G C E   N + L+ E++  G+L + +      N   +    +LK A++I  G+ YL
Sbjct: 87  KYKGICTEDGGNGIKLIMEFLPSGSLKEYL----PKNKNKINLKQQLKYAVQICKGMDYL 142

Query: 60  HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPE 117
               SR  V R++   N+L + +   K+ DF  +++I   +     +        +  PE
Sbjct: 143 G---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPE 199

Query: 118 YIATGDCNEKCDVYSF 133
            +         DV+SF
Sbjct: 200 CLMQSKFYIASDVWSF 215

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 54.6 bits (132), Expect = 1e-09
 Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 25/150 (16%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTL-----------ADRIYHPRQPNFEPVTCSLRLKIA 49
           + L+G C +     ++ EY   G L            +  Y   +   E +T    +   
Sbjct: 104 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163

Query: 50  MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVM 108
            ++A G+ YL    S+  + R++   N+L  E +V K+ DF  +  I   +  +      
Sbjct: 164 YQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN-- 218

Query: 109 GTFGYLP-----PEYIATGDCNEKCDVYSF 133
              G LP     PE +       + DV+SF
Sbjct: 219 ---GRLPVKWMAPEALFDRVYTHQSDVWSF 245

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 54.4 bits (131), Expect = 1e-09
 Identities = 32/136 (23%), Positives = 51/136 (37%), Gaps = 13/136 (9%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
            L G   E     +  E +E G+L   I        E            +   G+ YLH 
Sbjct: 114 PLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLP-EDRALY----YLGQALEGLEYLH- 167

Query: 62  AFSRPIVFRNVKPSNILFQEQ-SVAKLFDFSYSESIPE----GETRIRGRVMGTFGYLPP 116
             +R I+  +VK  N+L     S A L DF ++  +              + GT  ++ P
Sbjct: 168 --TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP 225

Query: 117 EYIATGDCNEKCDVYS 132
           E +    C+ K D++S
Sbjct: 226 EVVMGKPCDAKVDIWS 241

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 54.1 bits (131), Expect = 1e-09
 Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 13/119 (10%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
           L+ E+   G L   +   +   F E  +         E+A  + Y H    R ++ R++K
Sbjct: 91  LMLEFAPRGELYKELQ--KHGRFDEQRSA----TFMEELADALHYCH---ERKVIHRDIK 141

Query: 74  PSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYS 132
           P N+L   +   K+ DF +S   P    R    + GT  YLPPE I     +EK D++ 
Sbjct: 142 PENLLMGYKGELKIADFGWSVHAPSLRRRT---MCGTLDYLPPEMIEGKTHDEKVDLWC 197

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 54.7 bits (132), Expect = 1e-09
 Identities = 34/150 (22%), Positives = 60/150 (40%), Gaps = 25/150 (16%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTL-----------ADRIYHPRQPNFEPVTCSLRLKIA 49
           + L+G C +     ++ EY   G L            +  Y+P     E ++    +  A
Sbjct: 138 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCA 197

Query: 50  MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVM 108
            ++A G+ YL    S+  + R++   N+L  E +V K+ DF  +  I   +  +      
Sbjct: 198 YQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN-- 252

Query: 109 GTFGYLP-----PEYIATGDCNEKCDVYSF 133
              G LP     PE +       + DV+SF
Sbjct: 253 ---GRLPVKWMAPEALFDRIYTHQSDVWSF 279

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 54.6 bits (132), Expect = 1e-09
 Identities = 34/147 (23%), Positives = 56/147 (38%), Gaps = 23/147 (15%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTL-----ADRIYHPRQPNFEPVTCSLRLK----IAMEI 52
            L+G C      +++ EY  YG L              P F     +   +     + ++
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173

Query: 53  AYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTF 111
           A G+A+L    S+  + R+V   N+L     VAK+ DF  +  I       ++G      
Sbjct: 174 AQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN----- 225

Query: 112 GYLP-----PEYIATGDCNEKCDVYSF 133
             LP     PE I       + DV+S+
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSY 252

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 54.7 bits (132), Expect = 1e-09
 Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 21/138 (15%)

Query: 2   RLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +L+G  +E +  + +V EY+  G+L D   + R      +     LK ++++   + YL 
Sbjct: 250 QLLGVIVEEKGGLYIVTEYMAKGSLVD---YLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 306

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLP----- 115
                  V R++   N+L  E +VAK+ DF  ++     +   +         LP     
Sbjct: 307 ---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK---------LPVKWTA 354

Query: 116 PEYIATGDCNEKCDVYSF 133
           PE +     + K DV+SF
Sbjct: 355 PEALREKKFSTKSDVWSF 372

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 54.3 bits (131), Expect = 1e-09
 Identities = 27/151 (17%), Positives = 53/151 (35%), Gaps = 29/151 (19%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           R      E ++ ++  EY   G+LAD I    +        +    + +++  G+ Y+H 
Sbjct: 75  RYFSAWAEDDHMLIQNEYCNGGSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIH- 132

Query: 62  AFSRPIVFRNVKPSNIL-------------------FQEQSVAKLFDFSYSESIPEGETR 102
             S  +V  ++KPSNI                       + + K+ D  +   I   +  
Sbjct: 133 --SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE 190

Query: 103 IRGRVMGTFGYLPPEYIA-TGDCNEKCDVYS 132
                 G   +L  E +        K D+++
Sbjct: 191 E-----GDSRFLANEVLQENYTHLPKADIFA 216

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 53.7 bits (130), Expect = 2e-09
 Identities = 32/133 (24%), Positives = 51/133 (38%), Gaps = 10/133 (7%)

Query: 1   MRLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
           + L     E  N V LV E    G +   + +  +P  E            +I  G+ YL
Sbjct: 74  LELYNY-FEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR----HFMHQIITGMLYL 128

Query: 60  HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
           H   S  I+ R++  SN+L       K+ DF  +  +     +    + GT  Y+ PE  
Sbjct: 129 H---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK-HYTLCGTPNYISPEIA 184

Query: 120 ATGDCNEKCDVYS 132
                  + DV+S
Sbjct: 185 TRSAHGLESDVWS 197

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 53.8 bits (130), Expect = 2e-09
 Identities = 35/140 (25%), Positives = 55/140 (39%), Gaps = 17/140 (12%)

Query: 1   MRLIGCCLETENPVL-VFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
           + LIG  L  E     +  Y+ +G L   I   R P   P    L +   +++A G+ YL
Sbjct: 85  LALIGIMLPPEGLPHVLLPYMCHGDLLQFI---RSPQRNPTVKDL-ISFGLQVARGMEYL 140

Query: 60  HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYLP--- 115
                +  V R++   N +  E    K+ DF  +  I + E   ++         LP   
Sbjct: 141 A---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQ---HRHARLPVKW 194

Query: 116 --PEYIATGDCNEKCDVYSF 133
              E + T     K DV+SF
Sbjct: 195 TALESLQTYRFTTKSDVWSF 214

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 53.9 bits (130), Expect = 2e-09
 Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 10/119 (8%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           ++ E+++ G L D I    + N E +           +   +AYLH   ++ ++ R++K 
Sbjct: 119 VLMEFLQGGALTD-IVSQVRLNEEQIATVCE-----AVLQALAYLH---AQGVIHRDIKS 169

Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
            +IL       KL DF +   I +   + R  ++GT  ++ PE I+      + D++S 
Sbjct: 170 DSILLTLDGRVKLSDFGFCAQISKDVPK-RKSLVGTPYWMAPEVISRSLYATEVDIWSL 227

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 53.5 bits (129), Expect = 2e-09
 Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 10/119 (8%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           ++ EY+  G+  D +  P  P  E    +    I  EI  G+ YLH   S   + R++K 
Sbjct: 97  IIMEYLGGGSALD-LLEPG-PLDETQIAT----ILREILKGLDYLH---SEKKIHRDIKA 147

Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
           +N+L  E    KL DF  +  + + + + R   +GT  ++ PE I     + K D++S 
Sbjct: 148 ANVLLSEHGEVKLADFGVAGQLTDTQIK-RNTFVGTPFWMAPEVIKQSAYDSKADIWSL 205

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 53.4 bits (129), Expect = 2e-09
 Identities = 33/146 (22%), Positives = 60/146 (41%), Gaps = 22/146 (15%)

Query: 1   MRLIGCCLETE-----NPVLVFEYVEYGTLAD--RIYHPRQPNFEPVTCSLRLKIAMEIA 53
           +RL+G C+E        P+++  +++YG L                   +L LK  ++IA
Sbjct: 99  IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTL-LKFMVDIA 157

Query: 54  YGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFG 112
            G+ YL    +R  + R++   N + ++     + DF  S+ I  G+  R          
Sbjct: 158 LGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAK---- 210

Query: 113 YLP-----PEYIATGDCNEKCDVYSF 133
            +P      E +A      K DV++F
Sbjct: 211 -MPVKWIAIESLADRVYTSKSDVWAF 235

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 53.5 bits (129), Expect = 2e-09
 Identities = 31/147 (21%), Positives = 57/147 (38%), Gaps = 23/147 (15%)

Query: 1   MRLIGCCLETE------NPVLVFEYVEYGTLAD--RIYHPRQPNFEPVTCSLRLKIAMEI 52
            +L+G  L +        P+++  ++++G L          +  F     +L ++  ++I
Sbjct: 88  AKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTL-VRFMVDI 146

Query: 53  AYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTF 111
           A G+ YL    SR  + R++   N +  E     + DF  S  I  G+  R         
Sbjct: 147 ACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASK--- 200

Query: 112 GYLP-----PEYIATGDCNEKCDVYSF 133
             LP      E +A        DV++F
Sbjct: 201 --LPVKWLALESLADNLYTVHSDVWAF 225

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 53.4 bits (129), Expect = 3e-09
 Identities = 33/147 (22%), Positives = 51/147 (34%), Gaps = 24/147 (16%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTL-----------ADRIYHPRQPNFEPVTCSLRLKIAM 50
            L+G C       L  EY  +G L            D  +         ++    L  A 
Sbjct: 90  NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149

Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRV--- 107
           ++A G+ YL     +  + R++   NIL  E  VAK+ DF  S        +  GR+   
Sbjct: 150 DVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR 206

Query: 108 -MGTFGYLPPEYIATGDCNEKCDVYSF 133
            M        E +         DV+S+
Sbjct: 207 WM------AIESLNYSVYTTNSDVWSY 227

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 53.5 bits (129), Expect = 3e-09
 Identities = 31/136 (22%), Positives = 62/136 (45%), Gaps = 11/136 (8%)

Query: 2   RLIGCCLET-ENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
           +  G C       + L+ EY+ YG+L D +    Q + E +     L+   +I  G+ YL
Sbjct: 106 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYL 161

Query: 60  HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPE 117
               ++  + R++   NIL + ++  K+ DF  ++ +P+ +   + +  G     +  PE
Sbjct: 162 G---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPE 218

Query: 118 YIATGDCNEKCDVYSF 133
            +     +   DV+SF
Sbjct: 219 SLTESKFSVASDVWSF 234

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 53.7 bits (129), Expect = 3e-09
 Identities = 24/134 (17%), Positives = 52/134 (38%), Gaps = 11/134 (8%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           + L     +    V+++E++  G L +++        E        +   ++  G+ ++H
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAV----EYMRQVCKGLCHMH 272

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVA--KLFDFSYSESIPEGETRIRGRVMGTFGYLPPEY 118
                  V  ++KP NI+F  +     KL DF  +  +   +  ++    GT  +  PE 
Sbjct: 273 ---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ-SVKVTT-GTAEFAAPEV 327

Query: 119 IATGDCNEKCDVYS 132
                     D++S
Sbjct: 328 AEGKPVGYYTDMWS 341

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 53.1 bits (128), Expect = 4e-09
 Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 25/150 (16%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTL-----------ADRIYHPRQPNFEPVTCSLRLKIA 49
           + L+G C +     ++ EY   G L            +  Y   +   E +T    +   
Sbjct: 150 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 209

Query: 50  MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVM 108
            ++A G+ YL    S+  + R++   N+L  E +V K+ DF  +  I   +  +      
Sbjct: 210 YQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN-- 264

Query: 109 GTFGYLP-----PEYIATGDCNEKCDVYSF 133
              G LP     PE +       + DV+SF
Sbjct: 265 ---GRLPVKWMAPEALFDRVYTHQSDVWSF 291

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 52.8 bits (127), Expect = 5e-09
 Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 12/127 (9%)

Query: 9   ETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI 67
           E +  + L+ E++  G L DRI                ++ A E   G+ ++H      I
Sbjct: 118 EDKYEMVLILEFLSGGELFDRIAA-EDYKMSEAEVINYMRQACE---GLKHMH---EHSI 170

Query: 68  VFRNVKPSNILFQ--EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN 125
           V  ++KP NI+ +  + S  K+ DF  +  +   E  ++     T  +  PE +      
Sbjct: 171 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE-IVKVTT-ATAEFAAPEIVDREPVG 228

Query: 126 EKCDVYS 132
              D+++
Sbjct: 229 FYTDMWA 235

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 52.7 bits (127), Expect = 5e-09
 Identities = 31/136 (22%), Positives = 62/136 (45%), Gaps = 11/136 (8%)

Query: 2   RLIGCCLET-ENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
           +  G C       + L+ EY+ YG+L D +    Q + E +     L+   +I  G+ YL
Sbjct: 75  KYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYL 130

Query: 60  HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPE 117
               ++  + R++   NIL + ++  K+ DF  ++ +P+ +   + +  G     +  PE
Sbjct: 131 G---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPE 187

Query: 118 YIATGDCNEKCDVYSF 133
            +     +   DV+SF
Sbjct: 188 SLTESKFSVASDVWSF 203

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 52.6 bits (127), Expect = 5e-09
 Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 15/129 (11%)

Query: 9   ETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI 67
           E    V L+ E V  G L D +   ++ +      +  +K   +I  G+ YLH   ++ I
Sbjct: 85  ENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFIK---QILDGVNYLH---TKKI 136

Query: 68  VFRNVKPSNILFQ----EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
              ++KP NI+           KL DF  +  I +G    +    GT  ++ PE +    
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV-EFKNIF-GTPEFVAPEIVNYEP 194

Query: 124 CNEKCDVYS 132
              + D++S
Sbjct: 195 LGLEADMWS 203

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 52.3 bits (126), Expect = 6e-09
 Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 13/122 (10%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           +VFE V  G + +          E            ++  GI YLH    + I+ R++KP
Sbjct: 115 MVFELVNQGPVMEVPTLKPLS--EDQAR----FYFQDLIKGIEYLH---YQKIIHRDIKP 165

Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN---EKCDVY 131
           SN+L  E    K+ DF  S      +  +   V GT  ++ PE ++        +  DV+
Sbjct: 166 SNLLVGEDGHIKIADFGVSNEFKGSDALLSNTV-GTPAFMAPESLSETRKIFSGKALDVW 224

Query: 132 SF 133
           + 
Sbjct: 225 AM 226

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 52.5 bits (126), Expect = 6e-09
 Identities = 30/133 (22%), Positives = 51/133 (38%), Gaps = 17/133 (12%)

Query: 14  VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
            L+   +  G L + +         P++C   LKI  +    + ++H     PI+ R++K
Sbjct: 109 FLLLTELCKGQLVEFLKKMESRG--PLSCDTVLKIFYQTCRAVQHMH-RQKPPIIHRDLK 165

Query: 74  PSNILFQEQSVAKLFDF---SYSESIPEGETRIRGRVM--------GTFGYLPPEYIATG 122
             N+L   Q   KL DF   +     P+     + R +         T  Y  PE I   
Sbjct: 166 VENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLY 225

Query: 123 DC---NEKCDVYS 132
                 EK D+++
Sbjct: 226 SNFPIGEKQDIWA 238

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 52.2 bits (126), Expect = 7e-09
 Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 21/139 (15%)

Query: 2   RLIGCCLETENPVL-VFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           RL      T+ P+  + EY+E G+L D +   + P+   +T +  L +A +IA G+A++ 
Sbjct: 72  RLYAVV--TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE 126

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYLP---- 115
               R  + R+++ +NIL  +    K+ DF  +  I + E T   G         P    
Sbjct: 127 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG------AKFPIKWT 177

Query: 116 -PEYIATGDCNEKCDVYSF 133
            PE I  G    K DV+SF
Sbjct: 178 APEAINYGTFTIKSDVWSF 196

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 51.9 bits (125), Expect = 8e-09
 Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 16/137 (11%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           +L+G C       ++ E++ YG L D +   R+ N + V+  + L +A +I+  + YL  
Sbjct: 73  QLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE- 128

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLP-----P 116
              +  + R++   N L  E  + K+ DF  S  +                  P     P
Sbjct: 129 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-----AKFPIKWTAP 181

Query: 117 EYIATGDCNEKCDVYSF 133
           E +A    + K DV++F
Sbjct: 182 ESLAYNKFSIKSDVWAF 198

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 52.4 bits (126), Expect = 8e-09
 Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 15/129 (11%)

Query: 9   ETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI 67
           E    V L+ E V  G L D +   ++ +      +  +K   +I  G+ YLH   ++ I
Sbjct: 85  ENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFIK---QILDGVNYLH---TKKI 136

Query: 68  VFRNVKPSNILFQ----EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
              ++KP NI+           KL DF  +  I +G    +    GT  ++ PE +    
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV-EFKNIF-GTPEFVAPEIVNYEP 194

Query: 124 CNEKCDVYS 132
              + D++S
Sbjct: 195 LGLEADMWS 203

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 51.9 bits (125), Expect = 9e-09
 Identities = 40/157 (25%), Positives = 63/157 (40%), Gaps = 33/157 (21%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTL-------------------ADRIYHPRQPNFEPVTC 42
           +L+G C   +   L+FEY+ YG L                            P   P++C
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173

Query: 43  SLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET- 101
           + +L IA ++A G+AYL     R  V R++   N L  E  V K+ DF  S +I   +  
Sbjct: 174 AEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230

Query: 102 RIRGRVMGTFGYLP-----PEYIATGDCNEKCDVYSF 133
           +  G        +P     PE I       + DV+++
Sbjct: 231 KADGN-----DAIPIRWMPPESIFYNRYTTESDVWAY 262

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 51.9 bits (125), Expect = 9e-09
 Identities = 31/151 (20%), Positives = 56/151 (37%), Gaps = 27/151 (17%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTL-------------ADRIYHPRQPNFEPVTCSLRLKI 48
            L+G C      +++ EY  YG L             +       + +   +     L  
Sbjct: 91  NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150

Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRV 107
           + ++A G+A+L    S+  + R++   NIL     + K+ DF  +  I       ++G  
Sbjct: 151 SYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN- 206

Query: 108 MGTFGYLP-----PEYIATGDCNEKCDVYSF 133
                 LP     PE I       + DV+S+
Sbjct: 207 ----ARLPVKWMAPESIFNCVYTFESDVWSY 233

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 52.0 bits (125), Expect = 9e-09
 Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 21/139 (15%)

Query: 2   RLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +L      T+ P+ ++ E++  G+L D     +            +  + +IA G+A++ 
Sbjct: 247 KLHAVV--TKEPIYIITEFMAKGSLLD---FLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 301

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYLP---- 115
               R  + R+++ +NIL     V K+ DF  +  I + E T   G         P    
Sbjct: 302 ---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG------AKFPIKWT 352

Query: 116 -PEYIATGDCNEKCDVYSF 133
            PE I  G    K DV+SF
Sbjct: 353 APEAINFGSFTIKSDVWSF 371

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 51.9 bits (125), Expect = 9e-09
 Identities = 29/127 (22%), Positives = 51/127 (40%), Gaps = 10/127 (7%)

Query: 7   CLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
             E  + V +V E     +L +     R+   EP           +I  G  YLH     
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKR-RKALTEPEAR----YYLRQIVLGCQYLH---RN 160

Query: 66  PIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN 125
            ++ R++K  N+   E    K+ DF  +  +     R +  + GT  Y+ PE ++    +
Sbjct: 161 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKVLCGTPNYIAPEVLSKKGHS 219

Query: 126 EKCDVYS 132
            + DV+S
Sbjct: 220 FEVDVWS 226

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 51.8 bits (125), Expect = 1e-08
 Identities = 29/127 (22%), Positives = 51/127 (40%), Gaps = 10/127 (7%)

Query: 7   CLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
             E  + V +V E     +L +     R+   EP           +I  G  YLH     
Sbjct: 83  FFEDNDFVFVVLELCRRRSLLELHKR-RKALTEPEAR----YYLRQIVLGCQYLH---RN 134

Query: 66  PIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN 125
            ++ R++K  N+   E    K+ DF  +  +     R +  + GT  Y+ PE ++    +
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKVLCGTPNYIAPEVLSKKGHS 193

Query: 126 EKCDVYS 132
            + DV+S
Sbjct: 194 FEVDVWS 200

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 52.0 bits (125), Expect = 1e-08
 Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 15/120 (12%)

Query: 21  EY-GTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL 78
           E  GT A+++    Q    E +      K+ + I   + YL       ++ R+VKPSNIL
Sbjct: 104 ELMGTCAEKLKKRMQGPIPERILG----KMTVAIVKALYYLK--EKHGVIHRDVKPSNIL 157

Query: 79  FQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNE-----KCDVYSF 133
             E+   KL DF  S  +   + + + R  G   Y+ PE I   D  +     + DV+S 
Sbjct: 158 LDERGQIKLCDFGISGRL--VDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSL 215

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 51.6 bits (124), Expect = 1e-08
 Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 13/128 (10%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLR-LKIAM---EIAYGIAYLHVAFSRPIVFR 70
           LV + +  G++ D I        E  +  L    IA    E+  G+ YLH       + R
Sbjct: 90  LVMKLLSGGSVLD-IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHR 145

Query: 71  NVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLP----PEYIATGDC-N 125
           +VK  NIL  E    ++ DF  S  +  G    R +V  TF   P    PE +      +
Sbjct: 146 DVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYD 205

Query: 126 EKCDVYSF 133
            K D++SF
Sbjct: 206 FKADIWSF 213

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 51.9 bits (125), Expect = 1e-08
 Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 25/140 (17%)

Query: 9   ETENPV-LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAFSRP 66
           E E+   LVFE +  G++   I+  ++ +F E         +  ++A  + +LH   ++ 
Sbjct: 81  EEEDRFYLVFEKMRGGSILSHIH--KRRHFNELEAS----VVVQDVASALDFLH---NKG 131

Query: 67  IVFRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGE--TRIRGRVM----GTFGYLPPE 117
           I  R++KP NIL +   + S  K+ DF     I      + I    +    G+  Y+ PE
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191

Query: 118 -----YIATGDCNEKCDVYS 132
                       +++CD++S
Sbjct: 192 VVEAFSEEASIYDKRCDLWS 211

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 51.6 bits (124), Expect = 1e-08
 Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 19/139 (13%)

Query: 2   RLIGCCLET-ENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
           +  GCC +     + LV EYV  G+L D +          +  +  L  A +I  G+AYL
Sbjct: 97  KYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS------IGLAQLLLFAQQICEGMAYL 150

Query: 60  HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLP---- 115
           H   ++  + R++   N+L     + K+ DF  ++++PEG    R   +   G  P    
Sbjct: 151 H---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR---VREDGDSPVFWY 204

Query: 116 -PEYIATGDCNEKCDVYSF 133
            PE +         DV+SF
Sbjct: 205 APECLKEYKFYYASDVWSF 223

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 51.9 bits (125), Expect = 1e-08
 Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 15/129 (11%)

Query: 9   ETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI 67
           E +  V L+ E V  G L D +    + +      +  LK    I  G+ YLH   S  I
Sbjct: 84  ENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQ---ILNGVYYLH---SLQI 135

Query: 68  VFRNVKPSNILFQEQSVA----KLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
              ++KP NI+  +++V     K+ DF  +  I  G    +    GT  ++ PE +    
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-EFKNIF-GTPEFVAPEIVNYEP 193

Query: 124 CNEKCDVYS 132
              + D++S
Sbjct: 194 LGLEADMWS 202

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 51.6 bits (124), Expect = 1e-08
 Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 12/127 (9%)

Query: 9   ETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI 67
           E++N + LV EYV+ G L DRI      N   +   L +K   E   GI ++H      I
Sbjct: 156 ESKNDIVLVMEYVDGGELFDRIID-ESYNLTELDTILFMKQICE---GIRHMH---QMYI 208

Query: 68  VFRNVKPSNILFQEQSVA--KLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN 125
           +  ++KP NIL   +     K+ DF  +      E +++    GT  +L PE +     +
Sbjct: 209 LHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE-KLKVNF-GTPEFLAPEVVNYDFVS 266

Query: 126 EKCDVYS 132
              D++S
Sbjct: 267 FPTDMWS 273

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 51.6 bits (124), Expect = 1e-08
 Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 11/136 (8%)

Query: 2   RLIGCCLET-ENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
           +  G         + LV EY+  G L D +   R      +  S  L  + +I  G+ YL
Sbjct: 88  KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYL 143

Query: 60  HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPE 117
               SR  V R++   NIL + ++  K+ DF  ++ +P  +     R  G     +  PE
Sbjct: 144 G---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 200

Query: 118 YIATGDCNEKCDVYSF 133
            ++    + + DV+SF
Sbjct: 201 SLSDNIFSRQSDVWSF 216

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 51.8 bits (124), Expect = 1e-08
 Identities = 33/169 (19%), Positives = 54/169 (31%), Gaps = 46/169 (27%)

Query: 7   CLETENPV-LVFEYVEYGTLADRI---------------------YHPRQPNFEPVTCSL 44
             E E  + LV E    G L D++                       P            
Sbjct: 96  VYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIH 155

Query: 45  RLKIAMEIAY--------------GIAYLHVAFSRPIVFRNVKPSNILFQ--EQSVAKLF 88
             + +++                  + YLH   ++ I  R++KP N LF   +    KL 
Sbjct: 156 GFRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLV 212

Query: 89  DFSYSESIPEGETRIRGRVM---GTFGYLPPEYIATGDC--NEKCDVYS 132
           DF  S+   +        +    GT  ++ PE + T +     KCD +S
Sbjct: 213 DFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS 261

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 51.4 bits (124), Expect = 1e-08
 Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 15/129 (11%)

Query: 9   ETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI 67
           E +  V L+ E V  G L D +    + +      +  LK    I  G+ YLH   S+ I
Sbjct: 78  ENKTDVVLILELVSGGELFDFL--AEKESLTEDEATQFLKQ---ILDGVHYLH---SKRI 129

Query: 68  VFRNVKPSNILFQEQSVA----KLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
              ++KP NI+  +++V     KL DF  +  I  G    +    GT  ++ PE +    
Sbjct: 130 AHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN-EFKNIF-GTPEFVAPEIVNYEP 187

Query: 124 CNEKCDVYS 132
              + D++S
Sbjct: 188 LGLEADMWS 196

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 50.4 bits (121), Expect = 3e-08
 Identities = 36/156 (23%), Positives = 58/156 (37%), Gaps = 32/156 (20%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTL------------------ADRIYHPRQPNFEPVTCS 43
            L+G C  +    L+FEY  YG L                   ++     + +   +T  
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172

Query: 44  LRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET-R 102
             L  A ++A G+ +L     +  V R++   N+L     V K+ DF  +  I       
Sbjct: 173 DLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV 229

Query: 103 IRGRVMGTFGYLP-----PEYIATGDCNEKCDVYSF 133
           +RG        LP     PE +  G    K DV+S+
Sbjct: 230 VRGN-----ARLPVKWMAPESLFEGIYTIKSDVWSY 260

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 50.3 bits (121), Expect = 3e-08
 Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 19/138 (13%)

Query: 2   RLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           RL+G C    + V L+ + + +G L D +    + N       L L   ++IA G+ YL 
Sbjct: 81  RLLGIC--LTSTVQLITQLMPFGCLLDYV-REHKDNIGSQY--L-LNWCVQIAKGMNYLE 134

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLP----- 115
               R +V R++   N+L +     K+ DF  ++ +   E           G +P     
Sbjct: 135 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG----GKVPIKWMA 187

Query: 116 PEYIATGDCNEKCDVYSF 133
            E I       + DV+S+
Sbjct: 188 LESILHRIYTHQSDVWSY 205

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 50.6 bits (121), Expect = 4e-08
 Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 20/138 (14%)

Query: 2   RLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +LIG    TENPV ++ E    G L   +   +      +  +  +  A +++  +AYL 
Sbjct: 455 KLIGVI--TENPVWIIMELCTLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLE 508

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLP----- 115
              S+  V R++   N+L       KL DF  S  + +           + G LP     
Sbjct: 509 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY-----YKASKGKLPIKWMA 560

Query: 116 PEYIATGDCNEKCDVYSF 133
           PE I         DV+ F
Sbjct: 561 PESINFRRFTSASDVWMF 578

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 49.9 bits (120), Expect = 4e-08
 Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 14/94 (14%)

Query: 47  KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE---TRI 103
           KIA+ I   + +LH   S  ++ R+VKPSN+L       K+ DF  S     G       
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS-----GYLVDDVA 165

Query: 104 RGRVMGTFGYLPPEYIATGDC----NEKCDVYSF 133
           +    G   Y+ PE I         + K D++S 
Sbjct: 166 KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSL 199

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 49.9 bits (120), Expect = 4e-08
 Identities = 26/149 (17%), Positives = 55/149 (36%), Gaps = 25/149 (16%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLAD-----------RIYHPRQPNFEPVTCSLRLKIAM 50
            L+G   + +   ++F Y  +G L +                 +     +     + +  
Sbjct: 76  CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135

Query: 51  EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMG 109
           +IA G+ YL    S  +V +++   N+L  ++   K+ D      +   +  ++ G    
Sbjct: 136 QIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN--- 189

Query: 110 TFGYLP-----PEYIATGDCNEKCDVYSF 133
               LP     PE I  G  +   D++S+
Sbjct: 190 --SLLPIRWMAPEAIMYGKFSIDSDIWSY 216

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 49.1 bits (118), Expect = 7e-08
 Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 21/138 (15%)

Query: 2   RLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +L+G  +E +  + +V EY+  G+L D   + R      +     LK ++++   + YL 
Sbjct: 78  QLLGVIVEEKGGLYIVTEYMAKGSLVD---YLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 134

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLP----- 115
                  V R++   N+L  E +VAK+ DF  ++     +   +         LP     
Sbjct: 135 ---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK---------LPVKWTA 182

Query: 116 PEYIATGDCNEKCDVYSF 133
           PE +     + K DV+SF
Sbjct: 183 PEALREKKFSTKSDVWSF 200

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 49.2 bits (118), Expect = 7e-08
 Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 12/127 (9%)

Query: 9   ETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI 67
           E+   + ++FE++    + +RI                     ++   + +LH   S  I
Sbjct: 71  ESMEELVMIFEFISGLDIFERINT-SAFELNEREIV---SYVHQVCEALQFLH---SHNI 123

Query: 68  VFRNVKPSNILFQ--EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN 125
              +++P NI++Q    S  K+ +F  +  +  G+   R        Y  PE       +
Sbjct: 124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD-NFRLLF-TAPEYYAPEVHQHDVVS 181

Query: 126 EKCDVYS 132
              D++S
Sbjct: 182 TATDMWS 188

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 48.9 bits (117), Expect = 9e-08
 Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 12/123 (9%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LV E+   G++ D I + +    +    +    I  EI  G+++LH      ++ R++K 
Sbjct: 104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAY---ICREILRGLSHLH---QHKVIHRDIKG 157

Query: 75  SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC-----NEKCD 129
            N+L  E +  KL DF  S  +     R R   +GT  ++ PE IA  +      + K D
Sbjct: 158 QNVLLTENAEVKLVDFGVSAQLDRTVGR-RNTFIGTPYWMAPEVIACDENPDATYDFKSD 216

Query: 130 VYS 132
           ++S
Sbjct: 217 LWS 219

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 48.5 bits (116), Expect = 1e-07
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 14/94 (14%)

Query: 47  KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE---TRI 103
           KI +     + +L       I+ R++KPSNIL       KL DF  S     G+   +  
Sbjct: 129 KITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGIS-----GQLVDSIA 181

Query: 104 RGRVMGTFGYLPPEYIATGDCNE----KCDVYSF 133
           + R  G   Y+ PE I      +    + DV+S 
Sbjct: 182 KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSL 215

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 48.5 bits (116), Expect = 1e-07
 Identities = 27/144 (18%), Positives = 54/144 (37%), Gaps = 27/144 (18%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAY------- 54
           +L+G         ++ E+   G +   +    +   EP           +I         
Sbjct: 80  KLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEP-----------QIQVVCRQMLE 128

Query: 55  GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
            + +LH   S+ I+ R++K  N+L   +   +L DF  S    +   + R   +GT  ++
Sbjct: 129 ALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK-RDSFIGTPYWM 184

Query: 115 PPEYIATGDC-----NEKCDVYSF 133
            PE +          + K D++S 
Sbjct: 185 APEVVMCETMKDTPYDYKADIWSL 208

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 48.0 bits (115), Expect = 2e-07
 Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 19/138 (13%)

Query: 2   RLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           R+IG C        LV E  E G L   +   R      V     +++  +++ G+ YL 
Sbjct: 82  RMIGIC--EAESWMLVMEMAELGPLNKYLQQNRH-----VKDKNIIELVHQVSMGMKYLE 134

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLP----- 115
                  V R++   N+L   Q  AK+ DF  S+++   E   + +  G +   P     
Sbjct: 135 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW---PVKWYA 188

Query: 116 PEYIATGDCNEKCDVYSF 133
           PE I     + K DV+SF
Sbjct: 189 PECINYYKFSSKSDVWSF 206

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 48.1 bits (115), Expect = 2e-07
 Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 14/105 (13%)

Query: 15  LVFEYVEYGTLADRIYH-PRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNV 72
           +V + +  G L    YH  +  +F E      +L I  E+   + YL    ++ I+ R++
Sbjct: 92  MVVDLLLGGDL---RYHLQQNVHFKEETV---KLFIC-ELVMALDYLQ---NQRIIHRDM 141

Query: 73  KPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPE 117
           KP NIL  E     + DF+ +  +P         + GT  Y+ PE
Sbjct: 142 KPDNILLDEHGHVHITDFNIAAMLPRETQ--ITTMAGTKPYMAPE 184

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 48.1 bits (115), Expect = 2e-07
 Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 11/80 (13%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
           +V E ++ G L  RI       F E        +I   I   I YLH   S  I  R+VK
Sbjct: 92  IVMECLDGGELFSRIQDRGDQAFTEREAS----EIMKSIGEAIQYLH---SINIAHRDVK 144

Query: 74  PSNILFQ---EQSVAKLFDF 90
           P N+L+      ++ KL DF
Sbjct: 145 PENLLYTSKRPNAILKLTDF 164

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 47.7 bits (114), Expect = 2e-07
 Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 19/138 (13%)

Query: 2   RLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           RL+G C    + V L+ + + +G L D +   +    + +     L   ++IA G+ YL 
Sbjct: 81  RLLGIC--LTSTVQLITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLE 134

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLP----- 115
               R +V R++   N+L +     K+ DF  ++ +   E           G +P     
Sbjct: 135 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG----GKVPIKWMA 187

Query: 116 PEYIATGDCNEKCDVYSF 133
            E I       + DV+S+
Sbjct: 188 LESILHRIYTHQSDVWSY 205

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 12/135 (8%)

Query: 2   RLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           RL G       P+ +V E    G+L DR+    Q +F   T     + A+++A G+ YL 
Sbjct: 85  RLYGVV--LTPPMKMVTELAPLGSLLDRL-RKHQGHFLLGT---LSRYAVQVAEGMGYLE 138

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGY--LPPEY 118
              S+  + R++   N+L   + + K+ DF    ++P+ +     +      +    PE 
Sbjct: 139 ---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 195

Query: 119 IATGDCNEKCDVYSF 133
           + T   +   D + F
Sbjct: 196 LKTRTFSHASDTWMF 210

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 47.2 bits (113), Expect = 3e-07
 Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 18/138 (13%)

Query: 2   RLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           RLIG C      + LV E    G L   +        E +  S   ++  +++ G+ YL 
Sbjct: 74  RLIGVC--QAEALMLVMEMAGGGPLHKFL----VGKREEIPVSNVAELLHQVSMGMKYLE 127

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLP----- 115
               +  V R++   N+L   +  AK+ DF  S+++   ++    R  G +   P     
Sbjct: 128 ---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW---PLKWYA 181

Query: 116 PEYIATGDCNEKCDVYSF 133
           PE I     + + DV+S+
Sbjct: 182 PECINFRKFSSRSDVWSY 199

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 47.3 bits (113), Expect = 3e-07
 Identities = 33/138 (23%), Positives = 61/138 (44%), Gaps = 19/138 (13%)

Query: 2   RLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           RL+G C    + + LV +Y+  G+L D +    +    P      L   ++IA G+ YL 
Sbjct: 79  RLLGLC--PGSSLQLVTQYLPLGSLLDHV-RQHRGALGPQLL---LNWGVQIAKGMYYLE 132

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLP----- 115
                 +V RN+   N+L +  S  ++ DF  ++ +P  +     +++ +    P     
Sbjct: 133 ---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK----QLLYSEAKTPIKWMA 185

Query: 116 PEYIATGDCNEKCDVYSF 133
            E I  G    + DV+S+
Sbjct: 186 LESIHFGKYTHQSDVWSY 203

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 47.2 bits (113), Expect = 3e-07
 Identities = 35/157 (22%), Positives = 60/157 (38%), Gaps = 33/157 (21%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTL-------------------ADRIYHPRQPNFEPVTC 42
           +L G C +    +L+ EY +YG+L                   +        P+   +T 
Sbjct: 90  KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149

Query: 43  SLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET- 101
              +  A +I+ G+ YL       +V R++   NIL  E    K+ DF  S  + E ++ 
Sbjct: 150 GDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206

Query: 102 RIRGRVMGTFGYLP-----PEYIATGDCNEKCDVYSF 133
             R +     G +P      E +       + DV+SF
Sbjct: 207 VKRSQ-----GRIPVKWMAIESLFDHIYTTQSDVWSF 238

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 47.2 bits (113), Expect = 4e-07
 Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 17/137 (12%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           +L G CLE     LV E++E+G L+D +   R            L + +++  G+AYL  
Sbjct: 67  QLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRG----LFAAETLLGMCLDVCEGMAYLE- 121

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLP-----P 116
                ++ R++   N L  E  V K+ DF  +  + + +              P     P
Sbjct: 122 --EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG-----TKFPVKWASP 174

Query: 117 EYIATGDCNEKCDVYSF 133
           E  +    + K DV+SF
Sbjct: 175 EVFSFSRYSSKSDVWSF 191

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 46.5 bits (111), Expect = 7e-07
 Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 11/95 (11%)

Query: 8   LETENPV-LVFEYVEYGTLADRI-YHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
           +ETE  + L+ EY   G + D +  H R    E            +I   + Y H    +
Sbjct: 83  IETEKTLYLIMEYASGGEVFDYLVAHGRMK--EKEAR----SKFRQIVSAVQYCH---QK 133

Query: 66  PIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE 100
            IV R++K  N+L       K+ DF +S     G 
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 168

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 46.3 bits (110), Expect = 8e-07
 Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 22/137 (16%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM---EIAYGIAY 58
           +  GC L      LV EY   G+ +D +   ++P  E        +IA        G+AY
Sbjct: 118 QYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEV-------EIAAVTHGALQGLAY 169

Query: 59  LHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEY 118
           LH   S  ++ R+VK  NIL  E  + KL DF  +  +    +      +GT  ++ PE 
Sbjct: 170 LH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS-----FVGTPYWMAPEV 221

Query: 119 IATGDC---NEKCDVYS 132
           I   D    + K DV+S
Sbjct: 222 ILAMDEGQYDGKVDVWS 238

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 46.1 bits (110), Expect = 8e-07
 Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 17/137 (12%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           +L G C +     ++ EY+  G L + +    +           L++  ++   + YL  
Sbjct: 83  QLYGVCTKQRPIFIITEYMANGCLLNYL----REMRHRFQTQQLLEMCKDVCEAMEYLE- 137

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLP-----P 116
             S+  + R++   N L  +Q V K+ DF  S  + + E              P     P
Sbjct: 138 --SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG-----SKFPVRWSPP 190

Query: 117 EYIATGDCNEKCDVYSF 133
           E +     + K D+++F
Sbjct: 191 EVLMYSKFSSKSDIWAF 207

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 46.5 bits (110), Expect = 8e-07
 Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 12/135 (8%)

Query: 2   RLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           RLIG C      + LV E    G L   +        E +  S   ++  +++ G+ YL 
Sbjct: 400 RLIGVC--QAEALMLVMEMAGGGPLHKFL----VGKREEIPVSNVAELLHQVSMGMKYLE 453

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGY--LPPEY 118
               +  V RN+   N+L   +  AK+ DF  S+++   ++    R  G +      PE 
Sbjct: 454 ---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC 510

Query: 119 IATGDCNEKCDVYSF 133
           I     + + DV+S+
Sbjct: 511 INFRKFSSRSDVWSY 525

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 46.0 bits (110), Expect = 9e-07
 Identities = 29/139 (20%), Positives = 51/139 (36%), Gaps = 21/139 (15%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIY-HPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +  G C +     +V EY+  G L +  Y        EP      L++  ++  G+A+L 
Sbjct: 67  KFYGVCSKEYPIYIVTEYISNGCLLN--YLRSHGKGLEPSQL---LEMCYDVCEGMAFLE 121

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYLP---- 115
              S   + R++   N L       K+ DF  +  + + +     G         P    
Sbjct: 122 ---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG------TKFPVKWS 172

Query: 116 -PEYIATGDCNEKCDVYSF 133
            PE       + K DV++F
Sbjct: 173 APEVFHYFKYSSKSDVWAF 191

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 35/138 (25%), Positives = 54/138 (39%), Gaps = 20/138 (14%)

Query: 2   RLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +LIG    TENPV ++ E    G L   +    Q     +  +  +  A +++  +AYL 
Sbjct: 80  KLIGVI--TENPVWIIMELCTLGELRSFL----QVRKYSLDLASLILYAYQLSTALAYLE 133

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLP----- 115
              S+  V R++   N+L       KL DF  S  + +       +     G LP     
Sbjct: 134 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK-----GKLPIKWMA 185

Query: 116 PEYIATGDCNEKCDVYSF 133
           PE I         DV+ F
Sbjct: 186 PESINFRRFTSASDVWMF 203

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 45.0 bits (107), Expect = 2e-06
 Identities = 38/119 (31%), Positives = 53/119 (44%), Gaps = 21/119 (17%)

Query: 6   CCLETENPV-LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAF 63
            C +TE+ +  V EYV  G L   +   RQ    E      R   A EI+  + YLH   
Sbjct: 120 SCFQTESRLFFVIEYVNGGDLMFHMQ--RQRKLPEEHA---RFYSA-EISLALNYLH--- 170

Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYS-ESIPEGETRIRGRVMGTF-GYLPPEYIA 120
            R I++R++K  N+L   +   KL D+    E +  G+T        TF G   P YIA
Sbjct: 171 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT------TSTFCG--TPNYIA 221

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 34/138 (24%), Positives = 51/138 (36%), Gaps = 20/138 (14%)

Query: 2   RLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +LIG     E P  ++ E   YG L   +    +        +L +  +++I   +AYL 
Sbjct: 77  KLIGII--EEEPTWIIMELYPYGELGHYL---ERNKNSLKVLTL-VLYSLQICKAMAYLE 130

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLP----- 115
              S   V R++   NIL       KL DF  S  I + +         +   LP     
Sbjct: 131 ---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY-----YKASVTRLPIKWMS 182

Query: 116 PEYIATGDCNEKCDVYSF 133
           PE I         DV+ F
Sbjct: 183 PESINFRRFTTASDVWMF 200

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 45.0 bits (107), Expect = 2e-06
 Identities = 28/143 (19%), Positives = 56/143 (39%), Gaps = 25/143 (17%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL-- 59
              G C+  +  +LV E+V++G+L   +    + N   +    +L++A ++A  + +L  
Sbjct: 76  LNYGVCVCGDENILVQEFVKFGSLDTYL----KKNKNCINILWKLEVAKQLAAAMHFLEE 131

Query: 60  ----HVAFSRPIVFRNV---KPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTF 111
               H      +  +N+   +  +         KL D   S ++   +  + R   +   
Sbjct: 132 NTLIH----GNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWV--- 184

Query: 112 GYLPPEYIATGDC-NEKCDVYSF 133
              PPE I      N   D +SF
Sbjct: 185 ---PPECIENPKNLNLATDKWSF 204

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 44.5 bits (106), Expect = 3e-06
 Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 11/121 (9%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
               Y + G L   I       F E  T   R   A EI   + YLH    + I+ R++K
Sbjct: 107 FGLSYAKNGELLKYIRKIGS--FDETCT---RFYTA-EIVSALEYLH---GKGIIHRDLK 157

Query: 74  PSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM-GTFGYLPPEYIATGDCNEKCDVYS 132
           P NIL  E    ++ DF  ++ +     + R     GT  Y+ PE +      +  D+++
Sbjct: 158 PENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWA 217

Query: 133 F 133
            
Sbjct: 218 L 218

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 44.5 bits (106), Expect = 3e-06
 Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 21/119 (17%)

Query: 6   CCLETENPV-LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAF 63
              +T + +  V EY   G L   +   R   F E      R   A EI   + YLH   
Sbjct: 72  YAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERA---RFYGA-EIVSALEYLH--- 122

Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYS-ESIPEGETRIRGRVMGTF-GYLPPEYIA 120
           SR +V+R++K  N++  +    K+ DF    E I +G T      M TF G   PEY+A
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT------MKTFCG--TPEYLA 173

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 44.5 bits (106), Expect = 3e-06
 Identities = 38/119 (31%), Positives = 53/119 (44%), Gaps = 21/119 (17%)

Query: 6   CCLETENPV-LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAF 63
            C +TE+ +  V EYV  G L   +   RQ    E      R   A EI+  + YLH   
Sbjct: 77  SCFQTESRLFFVIEYVNGGDLMFHMQ--RQRKLPEEHA---RFYSA-EISLALNYLH--- 127

Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYS-ESIPEGETRIRGRVMGTF-GYLPPEYIA 120
            R I++R++K  N+L   +   KL D+    E +  G+T        TF G   P YIA
Sbjct: 128 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT------TSTFCG--TPNYIA 178

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 44.6 bits (106), Expect = 3e-06
 Identities = 32/137 (23%), Positives = 51/137 (37%), Gaps = 15/137 (10%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           RL G        ++V EY+E G+L   +    + +    T    + +   +  G+ YL  
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFL----RTHDGQFTIMQLVGMLRGVGAGMRYLS- 168

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLP-----P 116
                 V R++   N+L     V K+ DF  S  + +          G     P     P
Sbjct: 169 --DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKI---PIRWTAP 223

Query: 117 EYIATGDCNEKCDVYSF 133
           E IA    +   DV+SF
Sbjct: 224 EAIAFRTFSSASDVWSF 240

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 44.0 bits (104), Expect = 4e-06
 Identities = 10/80 (12%), Positives = 22/80 (27%), Gaps = 10/80 (12%)

Query: 13  PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNV 72
            ++V E++  G+L +       P          ++    +A      H      +     
Sbjct: 106 GLVVAEWIRGGSLQEVADTSPSP-------VGAIRAMQSLAAAADAAH---RAGVALSID 155

Query: 73  KPSNILFQEQSVAKLFDFSY 92
            PS +         L   + 
Sbjct: 156 HPSRVRVSIDGDVVLAYPAT 175

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 43.9 bits (104), Expect = 6e-06
 Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 14/107 (13%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LV EY   G L   +    +     +    R  +A EI   I  +H       V R++KP
Sbjct: 138 LVMEYYVGGDLLTLLSKFGERIPAEMA---RFYLA-EIVMAIDSVH---RLGYVHRDIKP 190

Query: 75  SNILFQEQSVAKLFDFSYS-ESIPEGETRIRGRVMGTFGYLPPEYIA 120
            NIL       +L DF    +   +G  R    V GT     P+Y++
Sbjct: 191 DNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV-GT-----PDYLS 231

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 43.9 bits (104), Expect = 7e-06
 Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 9/134 (6%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           RL G   +++  ++V EY+E G+L       R+ + +     L + +   IA G+ YL  
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDS---FLRKHDAQFTVIQL-VGMLRGIASGMKYLS- 164

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL--PPEYI 119
                 V R++   NIL     V K+ DF     + +          G        PE I
Sbjct: 165 --DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222

Query: 120 ATGDCNEKCDVYSF 133
           A        DV+S+
Sbjct: 223 AYRKFTSASDVWSY 236

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 43.8 bits (104), Expect = 7e-06
 Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 21/119 (17%)

Query: 6   CCLETENPV-LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAF 63
            C +T + +  V EYV  G L   I   +   F EP         A EIA G+ +L    
Sbjct: 88  SCFQTMDRLYFVMEYVNGGDLMYHIQ--QVGRFKEPHA---VFYAA-EIAIGLFFLQ--- 138

Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYS-ESIPEGETRIRGRVMGTF-GYLPPEYIA 120
           S+ I++R++K  N++   +   K+ DF    E+I +G T        TF G   P+YIA
Sbjct: 139 SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT------TKTFCG--TPDYIA 189

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 43.6 bits (103), Expect = 7e-06
 Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 14/107 (13%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LV +Y   G L   +        E +    R  +A E+   I  +H       V R++KP
Sbjct: 151 LVMDYYVGGDLLTLLSKFEDRLPEEMA---RFYLA-EMVIAIDSVH---QLHYVHRDIKP 203

Query: 75  SNILFQEQSVAKLFDFSYS-ESIPEGETRIRGRVMGTFGYLPPEYIA 120
            NIL       +L DF    + + +G  +    V GT     P+YI+
Sbjct: 204 DNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV-GT-----PDYIS 244

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 43.6 bits (103), Expect = 7e-06
 Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 20/119 (16%)

Query: 6   CCLETENPV-LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAF 63
              +T + +  V EY   G L   +   R+  F E      R   A EI   + YLH   
Sbjct: 215 YSFQTHDRLCFVMEYANGGELFFHLS--RERVFSEDRA---RFYGA-EIVSALDYLHS-- 266

Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYS-ESIPEGETRIRGRVMGTF-GYLPPEYIA 120
            + +V+R++K  N++  +    K+ DF    E I +G T      M TF G   PEY+A
Sbjct: 267 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT------MKTFCG--TPEYLA 317

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 43.3 bits (103), Expect = 8e-06
 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 11/95 (11%)

Query: 8   LETENPV-LVFEYVEYGTLADRI-YHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
           + T     +V EYV  G L D I  H R    E        ++  +I   + Y H     
Sbjct: 80  ISTPTDFFMVMEYVSGGELFDYICKHGRVE--EMEAR----RLFQQILSAVDYCH---RH 130

Query: 66  PIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE 100
            +V R++KP N+L      AK+ DF  S  + +GE
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 43.5 bits (103), Expect = 8e-06
 Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 18/108 (16%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
           +V EY+  G L   +      +  E      R   A E+   +  +H   S   + R+VK
Sbjct: 146 MVMEYMPGGDL---VNLMSNYDVPEKWA---RFYTA-EVVLALDAIH---SMGFIHRDVK 195

Query: 74  PSNILFQEQSVAKLFDFSYS-ESIPEGETRIRGRVMGTFGYLPPEYIA 120
           P N+L  +    KL DF    +   EG  R    V GT     P+YI+
Sbjct: 196 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GT-----PDYIS 237

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 43.5 bits (103), Expect = 8e-06
 Identities = 39/140 (27%), Positives = 57/140 (40%), Gaps = 21/140 (15%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           RL G   + +  +++ EY+E G L       R+ + E     L + +   IA G+ YL  
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDK---FLREKDGEFSVLQL-VGMLRGIAAGMKYLA- 164

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLP--- 115
             +   V R++   NIL     V K+ DF  S   E  PE      G      G +P   
Sbjct: 165 --NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSG------GKIPIRW 216

Query: 116 --PEYIATGDCNEKCDVYSF 133
             PE I+        DV+SF
Sbjct: 217 TAPEAISYRKFTSASDVWSF 236

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 43.5 bits (102), Expect = 9e-06
 Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 21/119 (17%)

Query: 6   CCLETENPV-LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAF 63
            C +T + +  V EYV  G L   I    +  F EP         A EIA G+ +L    
Sbjct: 409 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGR--FKEPHA---VFYAA-EIAIGLFFLQ--- 459

Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYS-ESIPEGETRIRGRVMGTF-GYLPPEYIA 120
           S+ I++R++K  N++   +   K+ DF    E+I +G T        TF G   P+YIA
Sbjct: 460 SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT------TKTFCG--TPDYIA 510

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 43.0 bits (102), Expect = 1e-05
 Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 21/119 (17%)

Query: 6   CCLETENPV-LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAF 63
           CC +T + +  V E+V  G L   I   +   F E      R   A EI   + +LH   
Sbjct: 91  CCFQTPDRLFFVMEFVNGGDLMFHIQ--KSRRFDEARA---RFYAA-EIISALMFLH--- 141

Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYS-ESIPEGETRIRGRVMGTF-GYLPPEYIA 120
            + I++R++K  N+L   +   KL DF    E I  G T        TF G   P+YIA
Sbjct: 142 DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT------TATFCG--TPDYIA 192

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 42.6 bits (101), Expect = 2e-05
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 8/76 (10%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LVFE+V++ T+ D +        +        K   +I  GI + H   S  I+ R++KP
Sbjct: 101 LVFEFVDH-TILDDLELFPNG-LDYQVVQ---KYLFQIINGIGFCH---SHNIIHRDIKP 152

Query: 75  SNILFQEQSVAKLFDF 90
            NIL  +  V KL DF
Sbjct: 153 ENILVSQSGVVKLCDF 168

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 42.6 bits (101), Expect = 2e-05
 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 9/77 (11%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM-EIAYGIAYLHVAFSRPIVFRNVK 73
           LVFE+V+   L   +     P     T    +K  M +   G+ +LH   +  IV R++K
Sbjct: 96  LVFEHVDQ-DLRTYLDKAPPPGLPAET----IKDLMRQFLRGLDFLH---ANCIVHRDLK 147

Query: 74  PSNILFQEQSVAKLFDF 90
           P NIL       KL DF
Sbjct: 148 PENILVTSGGTVKLADF 164

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 8/76 (10%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LVFEY ++ T+   +   ++             I  +    + + H       + R+VKP
Sbjct: 79  LVFEYCDH-TVLHELDRYQRG-VPEHLVK---SITWQTLQAVNFCH---KHNCIHRDVKP 130

Query: 75  SNILFQEQSVAKLFDF 90
            NIL  + SV KL DF
Sbjct: 131 ENILITKHSVIKLCDF 146

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 42.2 bits (99), Expect = 2e-05
 Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 12/112 (10%)

Query: 27  DRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAK 86
           +    P     + +T    +  + ++A G+ +L    SR  + R++   NIL  E++V K
Sbjct: 177 EEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVK 233

Query: 87  LFDFSYSESIPEGETRIRGRVMGTFGYLP-----PEYIATGDCNEKCDVYSF 133
           + DF  +  I +    +R         LP     PE I       + DV+SF
Sbjct: 234 ICDFGLARDIYKDPDYVRKGD----ARLPLKWMAPETIFDRVYTIQSDVWSF 281

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 42.1 bits (99), Expect = 2e-05
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 11/95 (11%)

Query: 8   LETENPV-LVFEYVEYGTLADRI-YHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
           + T + + +V EYV  G L D I  + R    E  +     ++  +I  G+ Y H     
Sbjct: 85  ISTPSDIFMVMEYVSGGELFDYICKNGRLD--EKESR----RLFQQILSGVDYCH---RH 135

Query: 66  PIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE 100
            +V R++KP N+L      AK+ DF  S  + +GE
Sbjct: 136 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 41.8 bits (99), Expect = 3e-05
 Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 9/77 (11%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM-EIAYGIAYLHVAFSRPIVFRNVK 73
           LVFE+V+   L   +    +P     T    +K  M ++  G+ +LH   S  +V R++K
Sbjct: 96  LVFEHVDQ-DLTTYLDKVPEPGVPTET----IKDMMFQLLRGLDFLH---SHRVVHRDLK 147

Query: 74  PSNILFQEQSVAKLFDF 90
           P NIL       KL DF
Sbjct: 148 PQNILVTSSGQIKLADF 164

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 41.8 bits (99), Expect = 3e-05
 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 20/109 (18%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
           L+ +++  G L  R+   ++  F E      +  +A E+A  + +LH   S  I++R++K
Sbjct: 103 LILDFLRGGDLFTRLS--KEVMFTEEDV---KFYLA-ELALALDHLH---SLGIIYRDLK 153

Query: 74  PSNILFQEQSVAKLFDFSYS-ESIPEGETRIRGRVMGTF-GYLPPEYIA 120
           P NIL  E+   KL DF  S ESI   +         +F G    EY+A
Sbjct: 154 PENILLDEEGHIKLTDFGLSKESIDHEKK------AYSFCG--TVEYMA 194

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 41.8 bits (99), Expect = 3e-05
 Identities = 34/119 (28%), Positives = 49/119 (41%), Gaps = 21/119 (17%)

Query: 6   CCLETENPV-LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAF 63
           C  +T+  +  V EY+  G L   I       F            A EI  G+ +LH   
Sbjct: 85  CTFQTKENLFFVMEYLNGGDLMYHIQ--SCHKFDLSRA---TFYAA-EIILGLQFLH--- 135

Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYS-ESIPEGETRIRGRVMGTF-GYLPPEYIA 120
           S+ IV+R++K  NIL  +    K+ DF    E++             TF G   P+YIA
Sbjct: 136 SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK------TNTFCG--TPDYIA 186

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 41.4 bits (98), Expect = 4e-05
 Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 7/91 (7%)

Query: 2   RLIGCCLETENPVLVFEYVEY--GTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
           RL           LVFE+++       D            +  +L      ++  G+A+ 
Sbjct: 67  RLYDVIHTENKLTLVFEFMDNDLKKYMDS--RTVGNTPRGLELNLVKYFQWQLLQGLAFC 124

Query: 60  HVAFSRPIVFRNVKPSNILFQEQSVAKLFDF 90
           H      I+ R++KP N+L  ++   KL DF
Sbjct: 125 H---ENKILHRDLKPQNLLINKRGQLKLGDF 152

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 41.1 bits (97), Expect = 4e-05
 Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 13/107 (12%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LVF++ E+  LA  + +            +       +  G+ Y+H      I+ R++K 
Sbjct: 101 LVFDFCEH-DLAGLLSNVLVKFTLSEIKRV----MQMLLNGLYYIH---RNKILHRDMKA 152

Query: 75  SNILFQEQSVAKLFDF----SYSESIPEGETRIRGRVMGTFGYLPPE 117
           +N+L     V KL DF    ++S +      R   RV+ T  Y PPE
Sbjct: 153 ANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVV-TLWYRPPE 198

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 41.1 bits (97), Expect = 5e-05
 Identities = 40/119 (33%), Positives = 53/119 (44%), Gaps = 21/119 (17%)

Query: 6   CCLETENPV-LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAF 63
              +T + +  V +Y+  G L   +   R+  F EP     R   A EIA  + YLH   
Sbjct: 106 FSFQTADKLYFVLDYINGGELFYHLQ--RERCFLEPRA---RFYAA-EIASALGYLH--- 156

Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYS-ESIPEGETRIRGRVMGTF-GYLPPEYIA 120
           S  IV+R++KP NIL   Q    L DF    E+I    T        TF G   PEY+A
Sbjct: 157 SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST------TSTFCG--TPEYLA 207

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 41.1 bits (97), Expect = 5e-05
 Identities = 24/112 (21%), Positives = 40/112 (35%), Gaps = 18/112 (16%)

Query: 15  LVFEYVEYGT--LADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNV 72
           +V EY   G   + D +   R P               ++  G+ YLH   S+ IV +++
Sbjct: 85  MVMEYCVCGMQEMLDSVPEKRFP--VCQAH----GYFCQLIDGLEYLH---SQGIVHKDI 135

Query: 73  KPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF----GYLPPEYIA 120
           KP N+L       K+     +E++             T      + PPE   
Sbjct: 136 KPGNLLLTTGGTLKISALGVAEALHPFA---ADDTCRTSQGSPAFQPPEIAN 184

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 41.0 bits (97), Expect = 6e-05
 Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 21/119 (17%)

Query: 6   CCLETENPV-LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAF 63
              +T   + L+ EY+  G L  ++   R+  F E         +A EI+  + +LH   
Sbjct: 88  YAFQTGGKLYLILEYLSGGELFMQLE--REGIFMEDTA---CFYLA-EISMALGHLH--- 138

Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYS-ESIPEGETRIRGRVMGTF-GYLPPEYIA 120
            + I++R++KP NI+   Q   KL DF    ESI +G          TF G    EY+A
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV------THTFCG--TIEYMA 189

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 19/109 (17%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNF-EPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
           L+ +Y+  G L   +   ++  F E      ++ +  EI   + +LH      I++R++K
Sbjct: 136 LILDYINGGELFTHLS--QRERFTEHEV---QIYVG-EIVLALEHLH---KLGIIYRDIK 186

Query: 74  PSNILFQEQSVAKLFDFSYS-ESIPEGETRIRGRVMGTF-GYLPPEYIA 120
             NIL        L DF  S E + +   R        F G    EY+A
Sbjct: 187 LENILLDSNGHVVLTDFGLSKEFVADETERAY-----DFCG--TIEYMA 228

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 13/88 (14%)

Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
           A +I     YLH   S  +++R++KP N+L  +Q   ++ DF +++       R++GR  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196

Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
              GT   L PE I +   N+  D ++ 
Sbjct: 197 TLCGTPEALAPEIILSKGYNKAVDWWAL 224

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 9/90 (10%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM-EIAYGIAYLH 60
           +L+          LVFE++    L   +                +K  + ++  G+A+ H
Sbjct: 66  KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH 120

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDF 90
              S  ++ R++KP N+L   +   KL DF
Sbjct: 121 ---SHRVLHRDLKPQNLLINTEGAIKLADF 147

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 12/95 (12%)

Query: 8   LETENPV-LVFEYVEYGTLADRI-YHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
           + T   + +V EY   G L D I    R    E        +   +I   I Y H     
Sbjct: 78  ITTPTDIVMVIEYAG-GELFDYIVEKKRMT--EDEGR----RFFQQIICAIEYCH---RH 127

Query: 66  PIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE 100
            IV R++KP N+L  +    K+ DF  S  + +G 
Sbjct: 128 KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 12/116 (10%)

Query: 8   LETENPV-LVFEYVEYGTLADRI-YHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
               N   L  EY   G L DRI      P  EP       +   ++  G+ YLH     
Sbjct: 74  RREGNIQYLFLEYCSGGELFDRIEPDIGMP--EPDAQ----RFFHQLMAGVVYLH---GI 124

Query: 66  PIVFRNVKPSNILFQEQSVAKLFDFSYS-ESIPEGETRIRGRVMGTFGYLPPEYIA 120
            I  R++KP N+L  E+   K+ DF  +         R+  ++ GT  Y+ PE + 
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 38.9 bits (91), Expect = 3e-04
 Identities = 25/112 (22%), Positives = 40/112 (35%), Gaps = 19/112 (16%)

Query: 14  VLVFEYVE-YGTLADRI-YHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
           VL+ E  E    L D I         E +          ++   + + H   +  ++ R+
Sbjct: 124 VLILERPEPVQDLFDFITERGALQ--EELAR----SFFWQVLEAVRHCH---NCGVLHRD 174

Query: 72  VKPSNILF-QEQSVAKLFDFSYSESIPEG--ETRIRGRVMGTFGYLPPEYIA 120
           +K  NIL    +   KL DF     + +            GT  Y PPE+I 
Sbjct: 175 IKDENILIDLNRGELKLIDFGSGALLKDTVYTD-----FDGTRVYSPPEWIR 221

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 38.6 bits (90), Expect = 3e-04
 Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 10/83 (12%)

Query: 15  LVFEYVEY---GTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
           L+F+Y E+     +              +   +   +  +I  GI YLH   +  ++ R+
Sbjct: 97  LLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRD 153

Query: 72  VKPSNIL----FQEQSVAKLFDF 90
           +KP+NIL      E+   K+ D 
Sbjct: 154 LKPANILVMGEGPERGRVKIADM 176

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 38.3 bits (90), Expect = 4e-04
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           LVFE+++   L   +             S      +++  GIAY H    R ++ R++KP
Sbjct: 77  LVFEHLDQD-LKKLLDVCEGGLESVTAKSF----LLQLLNGIAYCH---DRRVLHRDLKP 128

Query: 75  SNILFQEQSVAKLFDF 90
            N+L   +   K+ DF
Sbjct: 129 QNLLINREGELKIADF 144

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 38.3 bits (90), Expect = 4e-04
 Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 10/90 (11%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM-EIAYGIAYLH 60
            LI          LVFE++E   L   +   +    +       +KI + ++  G+A+ H
Sbjct: 83  SLIDVIHSERCLTLVFEFMEKD-LKKVLDENKTG-LQDSQ----IKIYLYQLLRGVAHCH 136

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDF 90
                 I+ R++KP N+L       KL DF
Sbjct: 137 ---QHRILHRDLKPQNLLINSDGALKLADF 163

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 38.5 bits (90), Expect = 4e-04
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 5/78 (6%)

Query: 55  GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
           GI +LH   S  I+ R++KPSNI+ +     K+ DF  + +           V  T  Y 
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRYYR 193

Query: 115 PPEYIATGDCNEKCDVYS 132
            PE I      E  D++S
Sbjct: 194 APEVILGMGYKENVDIWS 211

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 38.2 bits (89), Expect = 5e-04
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 12/96 (12%)

Query: 8   LETENPV-LVFE-YVEYGTLADRI-YHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
            E +    LV E +     L   I  HPR    EP+       I  ++   + YL     
Sbjct: 98  FENQGFFQLVMEKHGSGLDLFAFIDRHPRLD--EPLAS----YIFRQLVSAVGYLR---L 148

Query: 65  RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE 100
           + I+ R++K  NI+  E    KL DF  +  +  G+
Sbjct: 149 KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK 184

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 38.1 bits (89), Expect = 5e-04
 Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 11/88 (12%)

Query: 8   LETENPV-LVFEYVEYGTLADRI-YHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
               N   L  EY   G L DRI      P  EP       +   ++  G+ YLH     
Sbjct: 74  RREGNIQYLFLEYCSGGELFDRIEPDIGMP--EPDAQ----RFFHQLMAGVVYLH---GI 124

Query: 66  PIVFRNVKPSNILFQEQSVAKLFDFSYS 93
            I  R++KP N+L  E+   K+ DF  +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 38.0 bits (89), Expect = 6e-04
 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 12/94 (12%)

Query: 9   ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
            +  P LVFE+V   T   ++Y               +    EI   + Y H   S  I+
Sbjct: 104 VSRTPALVFEHVN-NTDFKQLYQT----LTDYDIRFYMY---EILKALDYCH---SMGIM 152

Query: 69  FRNVKPSNILF-QEQSVAKLFDFSYSESIPEGET 101
            R+VKP N++   E    +L D+  +E    G+ 
Sbjct: 153 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 186

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 38.0 bits (89), Expect = 6e-04
 Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 10/90 (11%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM-EIAYGIAYLH 60
            L       ++  LVFEY++   L   +                +K+ + ++  G+AY H
Sbjct: 64  TLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNI-INMHN----VKLFLFQLLRGLAYCH 117

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDF 90
               + ++ R++KP N+L  E+   KL DF
Sbjct: 118 ---RQKVLHRDLKPQNLLINERGELKLADF 144

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 37.9 bits (87), Expect = 6e-04
 Identities = 20/136 (14%), Positives = 47/136 (34%), Gaps = 23/136 (16%)

Query: 15  LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
           +V E+   G   +++        +  + +    I  ++   +A    +       R++  
Sbjct: 139 IVLEFEFGGIDLEQM------RTKLSSLATAKSILHQLTASLAVAEASLR--FEHRDLHW 190

Query: 75  SNILFQEQSVAKLFDFSYSESIPEG----ETRIR----------GRVMGTFGYLPPEYIA 120
            N+L ++ S+ KL      +S        +  I           G V+     +  + + 
Sbjct: 191 GNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDED-LF 249

Query: 121 TGDCNEKCDVYSFDGS 136
           TGD + + D+Y     
Sbjct: 250 TGDGDYQFDIYRLMKK 265

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 37.9 bits (89), Expect = 7e-04
 Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 10/90 (11%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM-EIAYGIAYLH 60
           RL       +   LVFE+ +   L            +P      +K  + ++  G+ + H
Sbjct: 65  RLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGD-LDPEI----VKSFLFQLLKGLGFCH 118

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDF 90
              SR ++ R++KP N+L       KL +F
Sbjct: 119 ---SRNVLHRDLKPQNLLINRNGELKLANF 145

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 37.6 bits (88), Expect = 8e-04
 Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 10/91 (10%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAME-IAYGIAYL 59
           + L+       N  LVF+++E   L   I         P      +K  M     G+ YL
Sbjct: 75  IGLLDAFGHKSNISLVFDFMETD-LEVIIKDNSLV-LTPSH----IKAYMLMTLQGLEYL 128

Query: 60  HVAFSRPIVFRNVKPSNILFQEQSVAKLFDF 90
           H      I+ R++KP+N+L  E  V KL DF
Sbjct: 129 H---QHWILHRDLKPNNLLLDENGVLKLADF 156

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 37.3 bits (87), Expect = 9e-04
 Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 20/112 (17%)

Query: 15  LVFEYVEYGTLADRI-YHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
           ++ EY   G L +RI    R    E            ++  G++Y H   S  I  R++K
Sbjct: 93  IIMEYASGGELYERICNAGRFS--EDEAR----FFFQQLLSGVSYCH---SMQICHRDLK 143

Query: 74  PSNILFQEQSVA--KLFDFSYSESIPEGE---TRIRGRVMGTFGYLPPEYIA 120
             N L         K+ DF YS+S        + +     GT  Y+ PE + 
Sbjct: 144 LENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-----GTPAYIAPEVLL 190

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	159
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.98
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.98
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.98
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.98
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.98
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.98
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.97
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.97
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.97
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.97
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.97
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.97
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.97
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.97
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.97
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.97
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.97
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.97
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.97
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.97
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.97
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.97
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.97
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.97
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.97
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.97
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.97
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.97
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.97
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.97
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.97
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.97
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.97
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.97
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.97
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.97
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.97
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.97
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.97
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.97
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.97
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.97
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.97
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.97
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.97
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.97
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.97
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.97
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.97
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.97
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.97
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.97
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.97
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.97
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.97
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.97
3niz_A	311	Rhodanese family protein; structural genomics, str	99.96
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.96
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.96
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.96
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.96
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.96
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.96
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.96
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.96
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.96
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.96
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.96
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.96
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.96
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.96
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.96
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.96
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.96
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.96
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.96
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.96
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.96
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.96
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.96
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.96
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.96
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.96
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.96
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.96
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.96
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.96
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.96
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.96
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.96
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.96
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.96
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.96
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.96
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.96
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.96
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.96
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.96
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.96
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.96
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.96
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.96
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.96
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.96
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.96
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.96
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.96
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.96
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.96
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.96
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.96
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.96
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.96
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.96
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.96
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.96
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.96
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.96
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.96
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.96
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.96
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.96
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.96
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.96
3bhy_A	283	Death-associated protein kinase 3; death associate	99.96
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.96
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.96
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.96
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.96
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.96
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.96
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.96
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.96
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.96
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.96
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.96
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.96
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.96
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.96
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.96
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.96
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.96
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.96
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.96
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.96
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.96
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.96
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.96
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.96
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.95
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.95
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.95
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.95
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.95
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.95
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.95
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.95
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.95
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.95
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.95
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.95
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.95
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.95
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.95
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.95
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.95
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.95
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.95
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.95
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.95
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.95
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.95
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.95
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.95
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.95
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.95
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.95
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.95
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.95
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.95
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.95
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.95
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.95
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.95
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.95
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.95
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.95
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.95
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.95
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.95
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.95
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.95
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.95
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.95
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.95
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.95
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.95
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.95
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.95
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.95
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.95
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.95
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.95
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.95
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.95
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.95
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.95
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.94
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.94
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.94
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.94
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.94
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.94
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.94
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.94
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.94
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.94
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.94
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.94
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.94
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.94
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.94
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.94
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.93
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.93
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.92
3uqc_A	286	Probable conserved transmembrane protein; structur	99.91
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.81
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.62
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.33
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.04
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.6
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.48
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.34
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	97.67
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	97.49
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.46
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	97.16
3ats_A	357	Putative uncharacterized protein; hypothetical pro	96.65
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	96.65
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	94.62
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	93.33
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	93.24
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	90.53
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	89.26
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	87.25
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	85.43
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	84.35
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	83.64
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	82.36
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	82.12
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	81.58

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=7.7e-42  Score=243.47  Aligned_cols=144  Identities=20%  Similarity=0.318  Sum_probs=129.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++.+|+|||||++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+|||++
T Consensus        95 v~l~~~~~~~~~~yivmEy~~gG~L~~~i~~~-----~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~  166 (311)
T 4aw0_A           95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-----GSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLN  166 (311)
T ss_dssp             CCEEEEEECSSEEEEEECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC
T ss_pred             CeEEEEEEeCCEEEEEEecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEc
Confidence            68999999999999999999999999999754     46899999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCc-ceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.+||+|||+++.+.... .....+..||+.|+|||++.+..++.++|+||+||++ |+|++|+.||.+.+.
T Consensus       167 ~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvil-yeml~G~~PF~~~~~  239 (311)
T 4aw0_A          167 EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCII-YQLVAGLPPFRAGNE  239 (311)
T ss_dssp             TTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHH-HHHHHSSCSSCCSSH
T ss_pred             CCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHH-HHHHhCCCCCCCCCH
Confidence            99999999999998765332 2233456799999999999999999999999999999 999999999987653

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=3e-41  Score=242.88  Aligned_cols=145  Identities=23%  Similarity=0.249  Sum_probs=125.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++.+|+|||||++|+|.++++..     ..+++..+..++.|++.||.|||   +++++||||||+|||++
T Consensus       113 V~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~  184 (336)
T 4g3f_A          113 VPLYGAVREGPWVNIFMELLEGGSLGQLIKQM-----GCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLS  184 (336)
T ss_dssp             CCEEEEEEETTEEEEEECCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEEC
T ss_pred             CcEEEEEEECCEEEEEEeccCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEe
Confidence            68999999999999999999999999999754     46899999999999999999999   99999999999999999


Q ss_pred             CCC-ceEEEecCCCcccCCCcce----eeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCCc
Q 031436           81 EQS-VAKLFDFSYSESIPEGETR----IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWK  154 (159)
Q Consensus        81 ~~~-~~~l~d~~~~~~~~~~~~~----~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~  154 (159)
                      .++ .+||+|||+++........    ......||+.|+|||.+.+..++.++||||+||++ |+|++|+.||.+.+..
T Consensus       185 ~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvil-yemltG~~Pf~~~~~~  262 (336)
T 4g3f_A          185 SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMM-LHMLNGCHPWTQYFRG  262 (336)
T ss_dssp             TTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHH-HHHHHSSCSSTTTCCS
T ss_pred             CCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHH-HHHHHCcCCCCCCCHH
Confidence            886 6999999999876433211    11234689999999999999999999999999999 9999999999876544

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=2.1e-41  Score=244.40  Aligned_cols=141  Identities=21%  Similarity=0.360  Sum_probs=127.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++++|.+++.+|+|||||++|+|.+.+..      ..+++.++..++.|++.||.|||   +++++||||||+|||++
T Consensus       134 V~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~------~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~  204 (346)
T 4fih_A          134 VEMYNSYLVGDELWVVMEFLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLT  204 (346)
T ss_dssp             CCEEEEEEETTEEEEEECCCTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEC
T ss_pred             CcEEEEEEECCEEEEEEeCCCCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEC
Confidence            6899999999999999999999999998865      35889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+||+|||+++....... ......||+.|+|||++.+..|+.++||||+||++ |||++|+.||.+.+
T Consensus       205 ~~g~vKl~DFGla~~~~~~~~-~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvil-yeml~G~~PF~~~~  274 (346)
T 4fih_A          205 HDGRVKLSDFGFCAQVSKEVP-RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMV-IEMVDGEPPYFNEP  274 (346)
T ss_dssp             TTCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHH-HHHHHSSCTTTTSC
T ss_pred             CCCCEEEecCcCceecCCCCC-cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHH-HHHHHCCCCCCCcC
Confidence            999999999999987654332 22346799999999999999999999999999999 99999999998764

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.1e-41  Score=246.13  Aligned_cols=145  Identities=21%  Similarity=0.291  Sum_probs=128.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++.+|+|||||++|+|.+++...+.   ..+++.++..++.|++.||.|||   +++++||||||+|||++
T Consensus        86 V~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~---~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~  159 (350)
T 4b9d_A           86 VQYRESFEENGSLYIVMDYCEGGDLFKRINAQKG---VLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLT  159 (350)
T ss_dssp             CCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEEC
T ss_pred             CcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEEC
Confidence            6899999999999999999999999999975432   45788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.+||+|||+++...... .......||+.|+|||.+.+..|+.++||||+||++ |+|++|+.||.+.+.
T Consensus       160 ~~g~vKl~DFGla~~~~~~~-~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvil-yemltG~~PF~~~~~  230 (350)
T 4b9d_A          160 KDGTVQLGDFGIARVLNSTV-ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVL-YELCTLKHAFEAGSM  230 (350)
T ss_dssp             TTCCEEECSTTEESCCCHHH-HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHH-HHHHHSSCSCCCSSH
T ss_pred             CCCCEEEcccccceeecCCc-ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHH-HHHHHCCCCCCCcCH
Confidence            99999999999998664321 122345699999999999999999999999999999 999999999988654

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=1.6e-41  Score=241.53  Aligned_cols=143  Identities=26%  Similarity=0.333  Sum_probs=126.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++.+|+|||||+||+|.+++...     ..+++.++..++.|++.||.|||   +++++||||||+|||++
T Consensus        89 v~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~  160 (304)
T 3ubd_A           89 VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLD  160 (304)
T ss_dssp             ECEEEEEEETTEEEEEECCCTTCEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEEC
T ss_pred             CeEEEEEEECCEEEEEEEcCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEc
Confidence            57899999999999999999999999999764     46899999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.+|++|||+++....... ......||+.|+|||.+.+..++.++|+||+||++ |+|++|+.||.+.+.
T Consensus       161 ~~g~vKl~DFGla~~~~~~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvil-yemltG~~PF~~~~~  231 (304)
T 3ubd_A          161 EEGHIKLTDFGLSKESIDHEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLM-FEMLTGTLPFQGKDR  231 (304)
T ss_dssp             TTSCEEEESSEEEEC-----C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHH-HHHHHSSCSSCCSSH
T ss_pred             CCCCEEecccccceeccCCCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHH-HHHHhCCCCCCCcCH
Confidence            999999999999876543222 22345799999999999999999999999999999 999999999988654

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.1e-40  Score=245.98  Aligned_cols=142  Identities=20%  Similarity=0.346  Sum_probs=127.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++++|.+++.+|+|||||++|+|.+++..      ..+++.++..++.|++.||.|||   +++++||||||+|||++
T Consensus       211 V~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~------~~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~  281 (423)
T 4fie_A          211 VEMYNSYLVGDELWVVMEFLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLT  281 (423)
T ss_dssp             CCEEEEEEETTEEEEEEECCTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEEC
T ss_pred             CceEEEEEECCEEEEEEeCCCCCcHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEc
Confidence            6899999999999999999999999998865      35889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.+||+|||++..+..... ......||+.|+|||++.+..|+.++||||+||++ |+|++|+.||.+.+.
T Consensus       282 ~~g~vKl~DFGla~~~~~~~~-~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvil-yeml~G~~PF~~~~~  352 (423)
T 4fie_A          282 HDGRVKLSDFGFCAQVSKEVP-RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMV-IEMVDGEPPYFNEPP  352 (423)
T ss_dssp             TTCCEEECCCTTCEECCSSCC-CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHH-HHHHHSSCTTTTSCH
T ss_pred             CCCCEEEecCccceECCCCCc-cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHH-HHHHHCCCCCCCcCH
Confidence            999999999999987654332 22346799999999999999999999999999999 999999999987653

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=3.6e-41  Score=239.73  Aligned_cols=149  Identities=27%  Similarity=0.390  Sum_probs=128.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCC--------CCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecC
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR--------QPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNV   72 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--------~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l   72 (159)
                      |+++|+|.+++.+++|||||++|+|.+++...+        ......+++.++..++.|++.|+.|||   +++++||||
T Consensus        78 V~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDl  154 (299)
T 4asz_A           78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDL  154 (299)
T ss_dssp             CCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCC
T ss_pred             ccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCcc
Confidence            789999999999999999999999999987532        122356899999999999999999999   899999999


Q ss_pred             CCCCEEecCCCceEEEecCCCcccCCCcce-eeeeecccccccCccccccCCCCCCcceEeccccccCccee-ccccccc
Q 031436           73 KPSNILFQEQSVAKLFDFSYSESIPEGETR-IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRS  150 (159)
Q Consensus        73 ~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~  150 (159)
                      ||+|||++.+..+|++|||+++........ ......+|+.|+|||.+.+..++.++|||||||++ |||+| |+.||.+
T Consensus       155 Kp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl-~Ellt~G~~Pf~~  233 (299)
T 4asz_A          155 ATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVL-WEIFTYGKQPWYQ  233 (299)
T ss_dssp             SGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTTCCTTTT
T ss_pred             CHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHH-HHHHcCCCCCCCC
Confidence            999999999999999999999765433222 22234578999999999999999999999999999 99998 8999987


Q ss_pred             CCC
Q 031436          151 EDW  153 (159)
Q Consensus       151 ~~~  153 (159)
                      .+.
T Consensus       234 ~~~  236 (299)
T 4asz_A          234 LSN  236 (299)
T ss_dssp             SCH
T ss_pred             CCH
Confidence            653

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1.5e-40  Score=236.95  Aligned_cols=143  Identities=22%  Similarity=0.334  Sum_probs=119.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++|+|.+ +.+++|||||++|+|.+.+...+    ..+++.++..++.|++.||.|||   +++++||||||+|||++
T Consensus        95 V~l~g~~~~-~~~~iVmEy~~gGsL~~~l~~~~----~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~  166 (307)
T 3omv_A           95 LLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLH  166 (307)
T ss_dssp             CCEEEEECS-SSCEEEEECCSSCBHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEE
T ss_pred             eeEEEEEEC-CeEEEEEEcCCCCCHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEEC
Confidence            689998875 57899999999999999997543    46889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCc-ceeeeeecccccccCcccccc---CCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYLPPEYIAT---GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~ape~~~~---~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..+||+|||+++...... ........||+.|+|||++.+   .+|+.++|||||||++ |||++|+.||.+.+
T Consensus       167 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl-~Elltg~~Pf~~~~  241 (307)
T 3omv_A          167 EGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVL-YELMTGELPYSHIN  241 (307)
T ss_dssp             TTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHH-HHHHHSSCTTTTCC
T ss_pred             CCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHH-HHHHHCCCCCCCCC
Confidence            99999999999997654322 122334578999999999964   3589999999999999 99999999998754

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=3.3e-40  Score=237.62  Aligned_cols=148  Identities=28%  Similarity=0.413  Sum_probs=121.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCC----------CCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEe
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQP----------NFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFR   70 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~----------~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~   70 (159)
                      |+++|+|.+++.+++|||||++|+|.+++...+..          ...++++.++..++.|++.|+.|||   +++++||
T Consensus       106 V~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHR  182 (329)
T 4aoj_A          106 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHR  182 (329)
T ss_dssp             CCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred             CcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecc
Confidence            78999999999999999999999999998764321          2246899999999999999999999   8999999


Q ss_pred             cCCCCCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-ccccc
Q 031436           71 NVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWY  148 (159)
Q Consensus        71 ~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~  148 (159)
                      ||||+|||++.+..+||+|||+++....... .......+|+.|+|||.+.+..++.++|||||||++ |||+| |+.||
T Consensus       183 DLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl-~Ellt~G~~Pf  261 (329)
T 4aoj_A          183 DLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL-WEIFTYGKQPW  261 (329)
T ss_dssp             CCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHH-HHHHTTSCCTT
T ss_pred             cccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHH-HHHHcCCCCCC
Confidence            9999999999999999999999986643322 223345688999999999999999999999999999 99998 89999


Q ss_pred             ccCC
Q 031436          149 RSED  152 (159)
Q Consensus       149 ~~~~  152 (159)
                      .+.+
T Consensus       262 ~~~~  265 (329)
T 4aoj_A          262 YQLS  265 (329)
T ss_dssp             CSSC
T ss_pred             CCCC
Confidence            8764

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=1.9e-40  Score=236.89  Aligned_cols=149  Identities=17%  Similarity=0.287  Sum_probs=127.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCC-----------CCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQP-----------NFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVF   69 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-----------~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h   69 (159)
                      |+++|+|.+++.+++|||||++|+|.+++...+..           ....+++.++..++.|++.|+.|||   +++++|
T Consensus        92 V~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiH  168 (308)
T 4gt4_A           92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVH  168 (308)
T ss_dssp             CCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCC
T ss_pred             CCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCC
Confidence            68999999999999999999999999998653211           1245788899999999999999999   899999


Q ss_pred             ecCCCCCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccc
Q 031436           70 RNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAW  147 (159)
Q Consensus        70 ~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p  147 (159)
                      |||||+|||++.+..+||+|||+++....... .......+|+.|+|||.+.+..++.++|||||||++ |||+| |..|
T Consensus       169 RDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl-~El~t~g~~P  247 (308)
T 4gt4_A          169 KDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVL-WEVFSYGLQP  247 (308)
T ss_dssp             SCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTTCCT
T ss_pred             CCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHH-HHHHhCCCCC
Confidence            99999999999999999999999876543221 222345688999999999999999999999999999 99998 8999


Q ss_pred             cccCCC
Q 031436          148 YRSEDW  153 (159)
Q Consensus       148 ~~~~~~  153 (159)
                      |.+.+.
T Consensus       248 f~~~~~  253 (308)
T 4gt4_A          248 YCGYSN  253 (308)
T ss_dssp             TTTCCH
T ss_pred             CCCCCH
Confidence            987653

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=8e-40  Score=237.41  Aligned_cols=149  Identities=22%  Similarity=0.376  Sum_probs=127.2

Q ss_pred             CeEEEEEecC-CCceEEEEecCCCChHHHhhCCCC-----------CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeE
Q 031436            1 MRLIGCCLET-ENPVLVFEYVEYGTLADRIYHPRQ-----------PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV   68 (159)
Q Consensus         1 v~l~~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~-----------~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~   68 (159)
                      |+++|+|.+. +.+++|||||++|+|.++++..+.           .....+++..+..++.|++.|+.|||   +++++
T Consensus       131 V~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~ii  207 (353)
T 4ase_A          131 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCI  207 (353)
T ss_dssp             CCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCC
T ss_pred             EEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCee
Confidence            6899999764 578999999999999999875321           11245788999999999999999999   89999


Q ss_pred             EecCCCCCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-ccc
Q 031436           69 FRNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRA  146 (159)
Q Consensus        69 h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~  146 (159)
                      ||||||+|||++.+..+||+|||+++....... .......+|+.|+|||++.+..|+.++|||||||++ |||+| |+.
T Consensus       208 HRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l-~El~t~G~~  286 (353)
T 4ase_A          208 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL-WEIFSLGAS  286 (353)
T ss_dssp             CSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH-HHHTTTSCC
T ss_pred             cCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHH-HHHHhCCCC
Confidence            999999999999999999999999987654432 233445688999999999999999999999999999 99998 999


Q ss_pred             ccccCCC
Q 031436          147 WYRSEDW  153 (159)
Q Consensus       147 p~~~~~~  153 (159)
                      ||.+.+.
T Consensus       287 Pf~~~~~  293 (353)
T 4ase_A          287 PYPGVKI  293 (353)
T ss_dssp             SSTTCCC
T ss_pred             CCCCCCH
Confidence            9988654

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.9e-39  Score=228.08  Aligned_cols=141  Identities=24%  Similarity=0.344  Sum_probs=116.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++.+|+||||+ +|+|.+.+...     ..+++.++..++.|++.|++|||   +++++||||||+||+++
T Consensus        76 v~~~~~~~~~~~~~ivmEy~-~g~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~  146 (275)
T 3hyh_A           76 IKLYDVIKSKDEIIMVIEYA-GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLD  146 (275)
T ss_dssp             CCEEEEEECSSEEEEEEECC-CEEHHHHHHHS-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEEC
T ss_pred             CeEEEEEEECCEEEEEEeCC-CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEEC
Confidence            68999999999999999999 68999988754     46899999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCC-CCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC-NEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~-~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.+|++|||++.......  ......||+.|+|||.+.+..+ +.++|+||+||++ |+|++|+.||.+.+.
T Consensus       147 ~~~~vkl~DFGla~~~~~~~--~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvil-y~lltg~~PF~~~~~  217 (275)
T 3hyh_A          147 EHLNVKIADFGLSNIMTDGN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVIL-YVMLCRRLPFDDESI  217 (275)
T ss_dssp             TTCCEEECCSSCC-----------------CTTSCHHHHSSSSCCCTHHHHHHHHHHH-HHHHHSSCSSCCSSH
T ss_pred             CCCCEEEeecCCCeecCCCC--ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHH-HHHHHCCCCCCCCCH
Confidence            99999999999987654322  2234579999999999998886 5799999999999 999999999987653

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=3.1e-39  Score=228.63  Aligned_cols=139  Identities=23%  Similarity=0.308  Sum_probs=119.0

Q ss_pred             CeEEEEEec----CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCC--eEEecCCC
Q 031436            1 MRLIGCCLE----TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRP--IVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~--~~h~~l~~   74 (159)
                      |+++++|.+    ++.+++|||||++|+|.+.+...     ..+++..+..++.|++.||.|||   +++  ++||||||
T Consensus        88 V~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp  159 (290)
T 3fpq_A           88 VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKC  159 (290)
T ss_dssp             CCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCG
T ss_pred             CcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccCh
Confidence            688998865    34578999999999999999764     46889999999999999999999   777  99999999


Q ss_pred             CCEEecC-CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           75 SNILFQE-QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        75 ~nil~~~-~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +|||++. ++.+||+|||+++.....   ......||+.|+|||.+.+ +++.++|||||||++ |+|++|+.||.+.+
T Consensus       160 ~NILl~~~~g~vKl~DFGla~~~~~~---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvil-yelltg~~Pf~~~~  233 (290)
T 3fpq_A          160 DNIFITGPTGSVKIGDLGLATLKRAS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCM-LEMATSEYPYSECQ  233 (290)
T ss_dssp             GGEEESSTTSCEEECCTTGGGGCCTT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHH-HHHHHSSCTTTTCS
T ss_pred             hheeEECCCCCEEEEeCcCCEeCCCC---ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHH-HHHHHCCCCCCCCC
Confidence            9999974 689999999998754322   2234579999999998865 699999999999999 99999999997644

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=4.1e-38  Score=242.27  Aligned_cols=141  Identities=20%  Similarity=0.317  Sum_probs=126.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++++|.+.+.+|+|||||+||+|.+++...     ..+++..+..++.|++.||.|||   +++++||||||+|||++
T Consensus       255 V~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~-----~~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld  326 (689)
T 3v5w_A          255 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH-----GVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLD  326 (689)
T ss_dssp             CCEEEEEECSSEEEEEECCCCSCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEEC
T ss_pred             eEEEEEEEECCEEEEEEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEe
Confidence            68999999999999999999999999999764     46899999999999999999999   99999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccc-cCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA-TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~-~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.+||+|||++.......   ..+..||+.|+|||++. +..|+.++|+||+||++ |+|++|++||.+.+.
T Consensus       327 ~~G~vKL~DFGlA~~~~~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvil-YEmLtG~~PF~~~~~  396 (689)
T 3v5w_A          327 EHGHVRISDLGLACDFSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCML-FKLLRGHSPFRQHKT  396 (689)
T ss_dssp             TTSCEEECCCTTCEECSSCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHH-HHHHHSSCTTCGGGC
T ss_pred             CCCCEEecccceeeecCCCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHH-HHHHhCCCCCCCCCh
Confidence            99999999999998764432   23457999999999996 45799999999999999 999999999987543

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=4.8e-38  Score=224.38  Aligned_cols=141  Identities=22%  Similarity=0.279  Sum_probs=116.3

Q ss_pred             CeEEEEEecCC----CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCC--------CeE
Q 031436            1 MRLIGCCLETE----NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR--------PIV   68 (159)
Q Consensus         1 v~l~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~--------~~~   68 (159)
                      |+++|+|.+++    .+++|||||++|+|.+.+..      .+++++....++.|++.|+.|+|   ++        +++
T Consensus        60 v~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~------~~l~~~~~~~i~~~ia~gl~ylH---~~~~~~~~~~~Ii  130 (303)
T 3hmm_A           60 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLH---MEIVGTQGKPAIA  130 (303)
T ss_dssp             CCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHH---CCBCSTTCBCCEE
T ss_pred             CcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHH---HhhhhccCCCCEe
Confidence            68999998654    47899999999999999965      35788899999999999999999   55        899


Q ss_pred             EecCCCCCEEecCCCceEEEecCCCcccCCCcce---eeeeecccccccCccccccC------CCCCCcceEeccccccC
Q 031436           69 FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR---IRGRVMGTFGYLPPEYIATG------DCNEKCDVYSFDGSRDS  139 (159)
Q Consensus        69 h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~------~~~~~~DvwS~g~~~~~  139 (159)
                      ||||||+|||++.+..+||+|||+++........   ......||+.|+|||++.+.      .++.++|||||||++ |
T Consensus       131 HRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl-~  209 (303)
T 3hmm_A          131 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF-W  209 (303)
T ss_dssp             CSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHH-H
T ss_pred             eccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHH-H
Confidence            9999999999999999999999998765433221   12234689999999999764      357789999999999 9


Q ss_pred             cceecccccccC
Q 031436          140 GHLTGRAWYRSE  151 (159)
Q Consensus       140 ~~~~g~~p~~~~  151 (159)
                      ||++|.+||...
T Consensus       210 El~tg~~~~~~~  221 (303)
T 3hmm_A          210 EIARRCSIGGIH  221 (303)
T ss_dssp             HHHHTBCBTTBC
T ss_pred             HHHHCCCCCCcc
Confidence            999998887544

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=1.2e-36  Score=221.69  Aligned_cols=138  Identities=21%  Similarity=0.327  Sum_probs=117.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++.+++|||||++|+|.+.+        +.+++.++..++.|++.|+.|||   +++++||||||+|||++
T Consensus        83 v~l~~~~~~~~~~~lvmE~~~g~~L~~~~--------~~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~  151 (361)
T 4f9c_A           83 MGVKYCFRKNDHVVIAMPYLEHESFLDIL--------NSLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYN  151 (361)
T ss_dssp             CCCSEEEEETTEEEEEEECCCCCCHHHHH--------TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEE
T ss_pred             ceEEEEEEECCEEEEEEeCCCcccHHHHH--------cCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEe
Confidence            57889999999999999999999999988        34788999999999999999999   89999999999999998


Q ss_pred             CC-CceEEEecCCCcccCCCcc---------------------------eeeeeecccccccCccccccC-CCCCCcceE
Q 031436           81 EQ-SVAKLFDFSYSESIPEGET---------------------------RIRGRVMGTFGYLPPEYIATG-DCNEKCDVY  131 (159)
Q Consensus        81 ~~-~~~~l~d~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~ape~~~~~-~~~~~~Dvw  131 (159)
                      .+ ..+|++|||+++.......                           .......||+.|+|||++.+. .++.++|+|
T Consensus       152 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiW  231 (361)
T 4f9c_A          152 RRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMW  231 (361)
T ss_dssp             TTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHH
T ss_pred             CCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchh
Confidence            76 6899999999865432110                           011234689999999999876 489999999


Q ss_pred             eccccccCcceeccccccc
Q 031436          132 SFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus       132 S~g~~~~~~~~~g~~p~~~  150 (159)
                      |+||++ |+|++|+.||..
T Consensus       232 SlG~il-~ell~G~~Pf~~  249 (361)
T 4f9c_A          232 SAGVIF-LSLLSGRYPFYK  249 (361)
T ss_dssp             HHHHHH-HHHHHTCSSSSC
T ss_pred             hhHHHH-HHHHHCCCCCCC
Confidence            999999 999999999854

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=2.4e-36  Score=215.11  Aligned_cols=141  Identities=26%  Similarity=0.361  Sum_probs=109.3

Q ss_pred             CeEEEEEecCC------------CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeE
Q 031436            1 MRLIGCCLETE------------NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV   68 (159)
Q Consensus         1 v~l~~~~~~~~------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~   68 (159)
                      |+++++|.+.+            .+|++||||++|+|.+.+.....  ........+..++.|++.|+.|||   +++++
T Consensus        66 V~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~al~ylH---~~~Ii  140 (299)
T 4g31_A           66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCT--IEERERSVCLHIFLQIAEAVEFLH---SKGLM  140 (299)
T ss_dssp             CCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCS--GGGSCHHHHHHHHHHHHHHHHHHH---HTTCC
T ss_pred             CeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCC--CChhHHHHHHHHHHHHHHHHHHHH---HCcCc
Confidence            67888887544            26899999999999999975421  122344557889999999999999   89999


Q ss_pred             EecCCCCCEEecCCCceEEEecCCCcccCCCcce-----------eeeeecccccccCccccccCCCCCCcceEeccccc
Q 031436           69 FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR-----------IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSR  137 (159)
Q Consensus        69 h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-----------~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~  137 (159)
                      ||||||+|||++.++.+||+|||+++........           ......||+.|+|||.+.+..|+.++||||+||++
T Consensus       141 HRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvil  220 (299)
T 4g31_A          141 HRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLIL  220 (299)
T ss_dssp             CCCCCGGGEEECTTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred             cccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999998766432211           11234689999999999999999999999999999


Q ss_pred             cCcceeccccccc
Q 031436          138 DSGHLTGRAWYRS  150 (159)
Q Consensus       138 ~~~~~~g~~p~~~  150 (159)
                       |||++   ||.+
T Consensus       221 -yell~---Pf~~  229 (299)
T 4g31_A          221 -FELLY---PFST  229 (299)
T ss_dssp             -HHHHS---CCSS
T ss_pred             -HHHcc---CCCC
Confidence             99986   6654

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=5.9e-36  Score=229.18  Aligned_cols=143  Identities=18%  Similarity=0.302  Sum_probs=126.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++.++++||||++|+|.+++....    ..+++.++..++.|++.||.|||   +++++||||||+|||++
T Consensus       217 v~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~----~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~  289 (573)
T 3uto_A          217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH----NKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFT  289 (573)
T ss_dssp             CCEEEEEECSSEEEEEEECCCCCBHHHHHTCTT----SCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEES
T ss_pred             CeEEEEEEECCEEEEEEeecCCCcHHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhcccc
Confidence            689999999999999999999999999886432    46899999999999999999999   89999999999999998


Q ss_pred             CC--CceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQ--SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~--~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+  ..+||+|||+++.+.....  .....|++.|+|||++.+..|+.++||||+||++ |+|++|+.||.+.+.
T Consensus       290 ~~~~~~vKl~DFG~a~~~~~~~~--~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvil-yeml~G~~Pf~~~~~  361 (573)
T 3uto_A          290 TKRSNELKLIDFGLTAHLDPKQS--VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLS-YILLSGLSPFGGEND  361 (573)
T ss_dssp             SSSCCCEEECCCSSCEECCTTSE--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHH-HHHHHSCCSSCCSSH
T ss_pred             CCCCCCEEEeeccceeEccCCCc--eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHH-HHHHHCCCCCCCcCH
Confidence            54  6899999999987754332  2345789999999999999999999999999999 999999999987653

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=6.2e-36  Score=220.17  Aligned_cols=143  Identities=20%  Similarity=0.312  Sum_probs=120.3

Q ss_pred             CeEEEEEec------CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCLE------TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      |++++++..      .+.+|+|||||. |+|.+.+...     ..+++..+..++.|++.||.|||   +++++||||||
T Consensus       116 v~l~~~~~~~~~~~~~~~~~ivmE~~~-g~L~~~i~~~-----~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP  186 (398)
T 4b99_A          116 IAIKDILRPTVPYGEFKSVYVVLDLME-SDLHQIIHSS-----QPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKP  186 (398)
T ss_dssp             CCEEEECCCSSCTTTCCCEEEEEECCS-EEHHHHHTSS-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCG
T ss_pred             ceEeeeeecccccccCCEEEEEEeCCC-CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCc
Confidence            577887753      367899999995 6899988654     56899999999999999999999   89999999999


Q ss_pred             CCEEecCCCceEEEecCCCcccCCCc---ceeeeeecccccccCccccccCC-CCCCcceEeccccccCcceeccccccc
Q 031436           75 SNILFQEQSVAKLFDFSYSESIPEGE---TRIRGRVMGTFGYLPPEYIATGD-CNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        75 ~nil~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~~~ape~~~~~~-~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      +|||++.++.+|++|||+++.+....   ........||+.|+|||++.+.. ++.++||||+||++ |+|++|++||.+
T Consensus       187 ~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il-~ell~G~~pF~g  265 (398)
T 4b99_A          187 SNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIF-GEMLARRQLFPG  265 (398)
T ss_dssp             GGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHH-HHHHHTSCSSCC
T ss_pred             cccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHH-HHHHHCCCCCCC
Confidence            99999999999999999998664322   11224567999999999988764 68999999999999 999999999988


Q ss_pred             CCC
Q 031436          151 EDW  153 (159)
Q Consensus       151 ~~~  153 (159)
                      .+.
T Consensus       266 ~~~  268 (398)
T 4b99_A          266 KNY  268 (398)
T ss_dssp             SSH
T ss_pred             CCH
Confidence            653

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=1.5e-34  Score=215.33  Aligned_cols=144  Identities=24%  Similarity=0.315  Sum_probs=126.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++++|.+++.+++||||+++|+|.+.+....    ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus       137 v~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~----~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~  209 (437)
T 4aw2_A          137 TTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFE----DRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMD  209 (437)
T ss_dssp             CCEEEEEECSSEEEEEECCCTTCBHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEC
T ss_pred             EEEEEEEeeCCEEEEEEecCCCCcHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEc
Confidence            578999999999999999999999999997632    46889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccc-----cCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA-----TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~-----~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+||+|||++...............|++.|+|||++.     ...++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       210 ~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil-~elltG~~Pf~~~~  285 (437)
T 4aw2_A          210 MNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCM-YEMLYGETPFYAES  285 (437)
T ss_dssp             TTSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHH-HHHHHSSCTTCCSS
T ss_pred             CCCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHH-HHHHhCCCCCCCCC
Confidence            9999999999998776554433334457899999999987     45689999999999999 99999999998765

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=4.7e-34  Score=208.24  Aligned_cols=147  Identities=22%  Similarity=0.243  Sum_probs=125.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++..++..++||||+++|+|.+.+...+......+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus       130 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~  206 (365)
T 3e7e_A          130 MKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILG  206 (365)
T ss_dssp             CCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEEC
T ss_pred             hhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEec
Confidence            568899999999999999999999999987532222356899999999999999999999   89999999999999998


Q ss_pred             C-----------CCceEEEecCCCcccCCC-cceeeeeecccccccCccccccCCCCCCcceEeccccccCcceeccccc
Q 031436           81 E-----------QSVAKLFDFSYSESIPEG-ETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWY  148 (159)
Q Consensus        81 ~-----------~~~~~l~d~~~~~~~~~~-~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~  148 (159)
                      .           +..+||+|||++...... .........++..|+|||.+.+..++.++|+||||+++ |+|++|+.||
T Consensus       207 ~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~elltg~~pf  285 (365)
T 3e7e_A          207 NGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATV-YCMLFGTYMK  285 (365)
T ss_dssp             GGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHH-HHHHHSSCCC
T ss_pred             ccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHH-HHHHhCCCcc
Confidence            8           789999999998654311 12223345689999999999999999999999999999 9999999998


Q ss_pred             ccC
Q 031436          149 RSE  151 (159)
Q Consensus       149 ~~~  151 (159)
                      ...
T Consensus       286 ~~~  288 (365)
T 3e7e_A          286 VKN  288 (365)
T ss_dssp             EEE
T ss_pred             ccC
Confidence            653

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=3e-34  Score=212.25  Aligned_cols=142  Identities=21%  Similarity=0.313  Sum_probs=125.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++++|.+++.+++||||+++|+|.+.+..      ..+++.....++.|++.|+.|||   +++++||||||+||+++
T Consensus       132 v~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~------~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~  202 (410)
T 3v8s_A          132 VQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN------YDVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLD  202 (410)
T ss_dssp             CCEEEEEECSSEEEEEECCCTTEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEC
T ss_pred             CeEEEEEEECCEEEEEEeCCCCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeEC
Confidence            5789999999999999999999999998864      34788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCC----CCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD----CNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~----~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+||+|||++...............|++.|+|||.+.+..    ++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       203 ~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvil-yell~G~~Pf~~~~  277 (410)
T 3v8s_A          203 KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL-YEMLVGDTPFYADS  277 (410)
T ss_dssp             TTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHH-HHHHHSSCTTCCSS
T ss_pred             CCCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHH-HHHHhCCCCCCCCC
Confidence            9999999999998776544433334567899999999998765    78999999999999 99999999998765

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=5.6e-34  Score=210.88  Aligned_cols=145  Identities=23%  Similarity=0.290  Sum_probs=125.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++++|.+++.+++||||+++|+|.+.+...+    ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus       124 v~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld  196 (412)
T 2vd5_A          124 TQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFG----ERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLD  196 (412)
T ss_dssp             CCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEC
T ss_pred             eeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeec
Confidence            578999999999999999999999999987532    35888999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccc-------cCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA-------TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~-------~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.+|++|||++...............|++.|+|||.+.       ...++.++|+||||+++ |+|++|+.||.+.+.
T Consensus       197 ~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvil-yelltG~~Pf~~~~~  275 (412)
T 2vd5_A          197 RCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFA-YEMFYGQTPFYADST  275 (412)
T ss_dssp             TTSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHH-HHHHHSSCTTCCSSH
T ss_pred             CCCCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHH-HHHHhCCCCCCCCCH
Confidence            9999999999998776544332233456899999999987       35689999999999999 999999999987653

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=4.4e-34  Score=207.80  Aligned_cols=143  Identities=22%  Similarity=0.308  Sum_probs=122.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+.+.+++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        87 v~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~  158 (353)
T 3txo_A           87 TQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKS-----RRFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLD  158 (353)
T ss_dssp             CCEEEEEECSSEEEEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEEC
T ss_pred             eeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEEC
Confidence            57899999999999999999999999988754     45889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.+||+|||++........ ......+++.|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+.
T Consensus       159 ~~g~ikL~DFG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~ell~G~~Pf~~~~~  229 (353)
T 3txo_A          159 HEGHCKLADFGMCKEGICNGV-TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLL-YEMLCGHAPFEAENE  229 (353)
T ss_dssp             TTSCEEECCCTTCBCSCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHH-HHHHHSSCSSCCSSH
T ss_pred             CCCCEEEccccceeecccCCc-cccccCCCcCeEChhhcCCCCcCCccCCCcchHHH-HHHHhCCCCCCCCCH
Confidence            999999999999875433222 22345689999999999988899999999999999 999999999987654

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.98  E-value=1.6e-33  Score=207.42  Aligned_cols=141  Identities=22%  Similarity=0.328  Sum_probs=124.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+.+.+++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus       116 v~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~  187 (396)
T 4dc2_A          116 VGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLD  187 (396)
T ss_dssp             CCEEEEEECSSEEEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEEC
T ss_pred             CeeEEEEEECCEEEEEEEcCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEC
Confidence            57899999999999999999999999988754     45889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .++.+||+|||++........ ......+++.|+|||.+.+..++.++|+||+|+++ |+|++|+.||...
T Consensus       188 ~~g~ikL~DFGla~~~~~~~~-~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvll-yell~G~~Pf~~~  256 (396)
T 4dc2_A          188 SEGHIKLTDYGMCKEGLRPGD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLM-FEMMAGRSPFDIV  256 (396)
T ss_dssp             TTSCEEECCCTTCBCCCCTTC-CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHH-HHHHHSSCSSTTT
T ss_pred             CCCCEEEeecceeeecccCCC-ccccccCCcccCCchhhcCCCCChHHHHHHHHHHH-HHHHhCCCCCccc
Confidence            999999999999875433222 22345789999999999999999999999999999 9999999999653

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.98  E-value=3.1e-33  Score=202.21  Aligned_cols=143  Identities=22%  Similarity=0.303  Sum_probs=125.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+.+..++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        68 v~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~  139 (337)
T 1o6l_A           68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRE-----RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLD  139 (337)
T ss_dssp             CCEEEEEECSSEEEEEEECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEEC
T ss_pred             cceEEEEEeCCEEEEEEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEEC
Confidence            57889999999999999999999999988654     45788999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.+|++|||++........ ......+++.|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+.
T Consensus       140 ~~g~vkL~DFG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~ell~g~~Pf~~~~~  210 (337)
T 1o6l_A          140 KDGHIKITDFGLCKEGISDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM-YEMMCGRLPFYNQDH  210 (337)
T ss_dssp             TTSCEEECCCTTCBCSCCTTC-CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHH-HHHHHSSCSSCCSSH
T ss_pred             CCCCEEEeeccchhhcccCCC-cccccccChhhCChhhhcCCCCCchhhcccchhHH-HHHhcCCCCCCCCCH
Confidence            999999999999876433222 22345689999999999999999999999999999 999999999987653

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.98  E-value=2.4e-33  Score=203.37  Aligned_cols=143  Identities=27%  Similarity=0.374  Sum_probs=125.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+.+..++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        81 v~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~  152 (345)
T 1xjd_A           81 THMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLD  152 (345)
T ss_dssp             CCEEEEEECSSEEEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEEC
T ss_pred             CcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEEC
Confidence            57899999999999999999999999998754     45788999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.+|++|||++........ ......+++.|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+.
T Consensus       153 ~~g~vkL~DFG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~ell~g~~Pf~~~~~  223 (345)
T 1xjd_A          153 KDGHIKIADFGMCKENMLGDA-KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLL-YEMLIGQSPFHGQDE  223 (345)
T ss_dssp             TTSCEEECCCTTCBCCCCTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHH-HHHHHSSCSSCCSSH
T ss_pred             CCCCEEEeEChhhhhcccCCC-cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHH-HHHhcCCCCCCCCCH
Confidence            999999999999875433222 22345689999999999999999999999999999 999999999987653

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.98  E-value=2.6e-33  Score=203.72  Aligned_cols=143  Identities=26%  Similarity=0.360  Sum_probs=125.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+.+..++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        84 v~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~  155 (353)
T 2i0e_A           84 TQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLD  155 (353)
T ss_dssp             CCEEEEEECSSEEEEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEEC
T ss_pred             eeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEc
Confidence            56889999999999999999999999998754     35888999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.+|++|||++........ ......|++.|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+.
T Consensus       156 ~~g~vkL~DFG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~ell~G~~Pf~~~~~  226 (353)
T 2i0e_A          156 SEGHIKIADFGMCKENIWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL-YEMLAGQAPFEGEDE  226 (353)
T ss_dssp             TTSCEEECCCTTCBCCCCTTC-CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHH-HHHHHSSCSSCCSSH
T ss_pred             CCCcEEEEeCCcccccccCCc-ccccccCCccccChhhhcCCCcCCcccccchHHHH-HHHHcCCCCCCCCCH
Confidence            999999999999876432221 22345689999999999999999999999999999 999999999987653

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.98  E-value=5.6e-33  Score=199.43  Aligned_cols=139  Identities=25%  Similarity=0.471  Sum_probs=124.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+.+..+++|||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||+|+||+++
T Consensus        69 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~  140 (318)
T 1fot_A           69 IRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS-----QRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLD  140 (318)
T ss_dssp             CCEEEEEECSSEEEEEECCCCSCBHHHHHHHT-----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEEC
T ss_pred             ceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEc
Confidence            57899999999999999999999999998754     45788899999999999999999   99999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+|++|||++.......    ....+++.|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       141 ~~g~~kL~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~ell~g~~pf~~~~  207 (318)
T 1fot_A          141 KNGHIKITDFGFAKYVPDVT----YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILI-YEMLAGYTPFYDSN  207 (318)
T ss_dssp             TTSCEEECCCSSCEECSSCB----CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHH-HHHHHSSCTTCCSS
T ss_pred             CCCCEEEeecCcceecCCcc----ccccCCccccCHhHhcCCCCCcccchhhhHHHH-HHHHhCCCCCCCCC
Confidence            99999999999987654322    234688999999999999999999999999999 99999999997654

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.98  E-value=2.8e-33  Score=198.81  Aligned_cols=143  Identities=29%  Similarity=0.433  Sum_probs=120.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..+++|||+++++|.+.+...     .++++..+..++.|++.|+.|+|   +++++|+||+|.||+++
T Consensus        74 v~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~  145 (294)
T 4eqm_A           74 VSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH-----GPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILID  145 (294)
T ss_dssp             CCEEEEEECSSEEEEEEECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEC
T ss_pred             ceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEC
Confidence            57899999999999999999999999998754     45888999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..+|++|||++...............+++.|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       146 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l-~~ll~g~~pf~~~~  216 (294)
T 4eqm_A          146 SNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVL-YEMLVGEPPFNGET  216 (294)
T ss_dssp             TTSCEEECCCSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHH-HHHHHSSCSSCSSC
T ss_pred             CCCCEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHH-HHHHhCCCCCCCCC
Confidence            999999999999876644332223345688999999999999999999999999999 99999999998765

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.97  E-value=4.4e-33  Score=203.87  Aligned_cols=142  Identities=25%  Similarity=0.319  Sum_probs=124.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+.+.+++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus       102 v~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~  173 (373)
T 2r5t_A          102 VGLHFSFQTADKLYFVLDYINGGELFYHLQRE-----RCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLD  173 (373)
T ss_dssp             CCEEEEEECSSEEEEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEC
T ss_pred             CCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEC
Confidence            57889999999999999999999999988754     45788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+||+|||++........ ......+++.|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       174 ~~g~ikL~DFG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~ell~G~~Pf~~~~  243 (373)
T 2r5t_A          174 SQGHIVLTDFGLCKENIEHNS-TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVL-YEMLYGLPPFYSRN  243 (373)
T ss_dssp             TTSCEEECCCCBCGGGBCCCC-CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHH-HHHHHSSCTTCCSB
T ss_pred             CCCCEEEeeCccccccccCCC-ccccccCCccccCHHHhCCCCCCchhhhHHHHHHH-HHHHcCCCCCCCCC
Confidence            999999999999875432221 22345689999999999999999999999999999 99999999998754

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.97  E-value=9.9e-33  Score=196.33  Aligned_cols=141  Identities=23%  Similarity=0.395  Sum_probs=124.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++..++..++||||+++|+|.+.+..      ..+++..+..++.|++.|+.|||   +++++||||+|+||+++
T Consensus        80 v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~  150 (297)
T 3fxz_A           80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLG  150 (297)
T ss_dssp             CCEEEEEEETTEEEEEEECCTTCBHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEC
T ss_pred             CeEeEEEEECCEEEEEEECCCCCCHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEC
Confidence            5789999999999999999999999999865      34788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+|++|||++......... .....++..|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       151 ~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~ell~g~~pf~~~~  220 (297)
T 3fxz_A          151 MDGSVKLTDFGFCAQITPEQSK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMA-IEMIEGEPPYLNEN  220 (297)
T ss_dssp             TTCCEEECCCTTCEECCSTTCC-BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHH-HHHHHSSCTTTTSC
T ss_pred             CCCCEEEeeCCCceecCCcccc-cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHH-HHHHhCCCCCCCCC
Confidence            9999999999998766443322 2334688999999999999999999999999999 99999999997754

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.97  E-value=9.4e-33  Score=215.03  Aligned_cols=143  Identities=26%  Similarity=0.360  Sum_probs=125.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+.+.+++||||+++|+|.+.+...     ..+++..+..++.|++.||.|||   +++++||||||+|||++
T Consensus       405 ~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~  476 (674)
T 3pfq_A          405 TQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLD  476 (674)
T ss_dssp             CCEEEECBCSSEEEEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEEC
T ss_pred             EEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEc
Confidence            46788888889999999999999999998754     45889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.+||+|||++........ ......|++.|+|||++.+..++.++|+||||+++ |||++|+.||.+.+.
T Consensus       477 ~~g~ikL~DFGla~~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvil-yelltG~~Pf~~~~~  547 (674)
T 3pfq_A          477 SEGHIKIADFGMCKENIWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL-YEMLAGQAPFEGEDE  547 (674)
T ss_dssp             SSSCEEECCCTTCEECCCTTC-CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHH-HHHHHSSCSSCCSSH
T ss_pred             CCCcEEEeecceeeccccCCc-ccccccCCCcccCHhhhcCCCCCccceEechHHHH-HHHHcCCCCCCCCCH
Confidence            999999999999875433222 22345789999999999999999999999999999 999999999988653

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.97  E-value=1.2e-32  Score=199.99  Aligned_cols=139  Identities=22%  Similarity=0.318  Sum_probs=124.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus       104 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~  175 (350)
T 1rdq_E          104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI-----GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLID  175 (350)
T ss_dssp             CCEEEEEECSSEEEEEEECCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEC
T ss_pred             CeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEEC
Confidence            57889999999999999999999999998754     35788999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+|++|||++.......    ....+++.|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       176 ~~g~~kL~DFg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~ell~g~~Pf~~~~  242 (350)
T 1rdq_E          176 QQGYIQVTDFGFAKRVKGRT----WTLCGTPEALAPEIILSKGYNKAVDWWALGVLI-YEMAAGYPPFFADQ  242 (350)
T ss_dssp             TTSCEEECCCTTCEECSSCB----CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             CCCCEEEcccccceeccCCc----ccccCCccccCHHHhcCCCCCCcCCEecccHhH-hHHhhCCCCCCCCC
Confidence            99999999999987654322    234688999999999999999999999999999 99999999998754

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.97  E-value=9.2e-33  Score=200.30  Aligned_cols=140  Identities=22%  Similarity=0.335  Sum_probs=123.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+.+..++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        73 v~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~  144 (345)
T 3a8x_A           73 VGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLD  144 (345)
T ss_dssp             CCEEEEEECSSEEEEEECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEEC
T ss_pred             CeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEC
Confidence            57899999999999999999999999988754     45889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceeccccccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      .++.+|++|||++........ ......+++.|+|||.+.+..++.++|+||+|+++ |+|++|+.||..
T Consensus       145 ~~g~~kL~DFG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~ell~g~~pf~~  212 (345)
T 3a8x_A          145 SEGHIKLTDYGMCKEGLRPGD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLM-FEMMAGRSPFDI  212 (345)
T ss_dssp             TTSCEEECCGGGCBCSCCTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHH-HHHHHSSCTTTT
T ss_pred             CCCCEEEEeccccccccCCCC-cccccCCCccccCccccCCCCCChHHhHHHHHHHH-HHHHhCCCCcCC
Confidence            999999999999875433222 22345689999999999999999999999999999 999999999965

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.97  E-value=2.9e-32  Score=200.10  Aligned_cols=141  Identities=21%  Similarity=0.329  Sum_probs=123.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++++|.+.+..++||||+.+|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||.||+++
T Consensus        78 v~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~  149 (384)
T 4fr4_A           78 VNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQN-----VHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLD  149 (384)
T ss_dssp             CCEEEEEECSSEEEEEECCCTTEEHHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEC
T ss_pred             CcEEEEEEeCCEEEEEEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEC
Confidence            57899999999999999999999999998754     45889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc---CCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT---GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~---~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+||+|||++........  .....+++.|+|||.+.+   ..++.++|+||+|+++ |+|++|+.||...+
T Consensus       150 ~~g~vkL~DFG~a~~~~~~~~--~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il-~elltG~~Pf~~~~  221 (384)
T 4fr4_A          150 EHGHVHITDFNIAAMLPRETQ--ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTA-YELLRGRRPYHIRS  221 (384)
T ss_dssp             TTSCEEECCCTTCEECCTTCC--BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHH-HHHHHSSCSSCCCT
T ss_pred             CCCCEEEeccceeeeccCCCc--eeccCCCccccCCeeeccCCCCCCCccceeechHHHH-HHHHhCCCCCCCCC
Confidence            999999999999876643322  234568999999999864   4589999999999999 99999999997643

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.97  E-value=3.3e-32  Score=198.48  Aligned_cols=141  Identities=23%  Similarity=0.369  Sum_probs=123.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +.+++||||+|+||+++
T Consensus        78 v~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~  149 (361)
T 2yab_A           78 ITLHDVYENRTDVVLILELVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLL  149 (361)
T ss_dssp             CCEEEEEECSSEEEEEEECCCSCBHHHHHTTC-----SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEES
T ss_pred             CcEEEEEEeCCEEEEEEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEe
Confidence            57899999999999999999999999998653     46889999999999999999999   89999999999999998


Q ss_pred             CCC----ceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQS----VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~----~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+.    .+|++|||++........  .....+++.|+|||.+.+..++.++|+||+|+++ |+|++|..||.+.+
T Consensus       150 ~~~~~~~~vkl~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil-~~ll~g~~Pf~~~~  222 (361)
T 2yab_A          150 DKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT-YILLSGASPFLGDT  222 (361)
T ss_dssp             CTTSSSCCEEECCCSSCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHH-HHHHHSCCSSCCSS
T ss_pred             CCCCCccCEEEEecCCceEcCCCCc--cccCCCCccEECchHHcCCCCCccccHHHHHHHH-HHHHhCCCCCCCCC
Confidence            765    799999999876644322  1234688999999999998999999999999999 99999999998754

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.97  E-value=2.4e-32  Score=199.79  Aligned_cols=150  Identities=23%  Similarity=0.344  Sum_probs=125.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCC-----------CCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQP-----------NFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVF   69 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-----------~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h   69 (159)
                      |+++++|.+++.+++||||+++|+|.+++...+..           ....+++..+..++.|++.|+.|||   +++++|
T Consensus       150 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH  226 (370)
T 2psq_A          150 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIH  226 (370)
T ss_dssp             CCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEEC
T ss_pred             eeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeec
Confidence            57899999999999999999999999998764321           1245788889999999999999999   899999


Q ss_pred             ecCCCCCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccc
Q 031436           70 RNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAW  147 (159)
Q Consensus        70 ~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p  147 (159)
                      |||||+||+++.++.+|++|||++........ .......++..|+|||.+.+..++.++|+||||+++ |+|++ |+.|
T Consensus       227 rDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il-~ellt~g~~p  305 (370)
T 2psq_A          227 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM-WEIFTLGGSP  305 (370)
T ss_dssp             SCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHH-HHHHTTSCCS
T ss_pred             cccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHH-HHHHcCCCCC
Confidence            99999999999999999999999876543221 111223456789999999999999999999999999 99998 9999


Q ss_pred             cccCCCc
Q 031436          148 YRSEDWK  154 (159)
Q Consensus       148 ~~~~~~~  154 (159)
                      |.+.+.+
T Consensus       306 ~~~~~~~  312 (370)
T 2psq_A          306 YPGIPVE  312 (370)
T ss_dssp             STTCCGG
T ss_pred             CCCCCHH
Confidence            9876543

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.97  E-value=1e-32  Score=198.90  Aligned_cols=142  Identities=20%  Similarity=0.302  Sum_probs=124.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+.+..++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        77 v~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~  148 (328)
T 3fe3_A           77 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAH-----GRMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLD  148 (328)
T ss_dssp             CCEEEEEECSSEEEEEECCCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEC
T ss_pred             eeEEEEEEECCEEEEEEECCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEc
Confidence            57899999999999999999999999988654     45788999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCC-CCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~-~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+..+|++|||++........  .....+++.|+|||.+.+..+. .++|+||+|+++ |+|++|+.||.+.+.
T Consensus       149 ~~~~~kl~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il-~ell~g~~pf~~~~~  219 (328)
T 3fe3_A          149 ADMNIKIADFGFSNEFTVGGK--LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVIL-YTLVSGSLPFDGQNL  219 (328)
T ss_dssp             TTSCEEECSTTCCGGGSSSCG--GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHH-HHHHHSSCSSCCSSH
T ss_pred             CCCCEEEeeccCceecCCCCc--cccccCCcceeCcccccCCCcCCchhhhhhhHHHH-HHHHhCCCCCCCCCH
Confidence            999999999999876543322  2234688999999999888775 789999999999 999999999988653

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.97  E-value=4.4e-32  Score=206.34  Aligned_cols=146  Identities=19%  Similarity=0.362  Sum_probs=126.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+.+.+++||||+++|+|.+.+..... ....+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus       248 v~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~-~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~  323 (543)
T 3c4z_A          248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLD  323 (543)
T ss_dssp             CCEEEEEECSSEEEEEECCCTTCBHHHHHHTSST-TSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEC
T ss_pred             eeEEEEEeeCCEEEEEEEeccCCCHHHHHHHhhc-ccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEe
Confidence            5788999999999999999999999998876432 1246889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+|++|||++......... .....|++.|+|||.+.+..++.++|+||+||++ |+|++|+.||.+.+
T Consensus       324 ~~g~vkL~DFGla~~~~~~~~~-~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvil-yelltG~~PF~~~~  393 (543)
T 3c4z_A          324 DDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTL-YEMIAARGPFRARG  393 (543)
T ss_dssp             TTSCEEECCCTTCEECCTTCCC-BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHH-HHHHHSSCSSCCTT
T ss_pred             CCCCEEEeecceeeeccCCCcc-cccccCCccccChhhhcCCCCChHHhcCcchHHH-HHHHhCCCCCCCCc
Confidence            9999999999998766443221 2334689999999999999999999999999999 99999999998754

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.97  E-value=1.9e-32  Score=204.56  Aligned_cols=143  Identities=21%  Similarity=0.295  Sum_probs=124.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCC-CCeEEecCCCCCEEe
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS-RPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~-~~~~h~~l~~~nil~   79 (159)
                      |+++++|.+++.+++||||+++|+|.+.+...     ..+++..+..++.|++.||.|||   + .+++||||||+||++
T Consensus       211 v~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll  282 (446)
T 4ejn_A          211 TALKYSFQTHDRLCFVMEYANGGELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLML  282 (446)
T ss_dssp             CCEEEEEEETTEEEEEECCCSSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEE
T ss_pred             eeEEEEEeeCCEEEEEEeeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEE
Confidence            57889999999999999999999999988654     45788999999999999999999   7 899999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           80 QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      +.++.+||+|||++......... .....+++.|+|||.+.+..++.++|+||||+++ |+|++|+.||.+.+.
T Consensus       283 ~~~~~~kl~DFG~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~ell~g~~Pf~~~~~  354 (446)
T 4ejn_A          283 DKDGHIKITDFGLCKEGIKDGAT-MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM-YEMMCGRLPFYNQDH  354 (446)
T ss_dssp             CSSSCEEECCCCCCCTTCC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHH-HHHHHSSCSSCCSSH
T ss_pred             CCCCCEEEccCCCceeccCCCcc-cccccCCccccCHhhcCCCCCCCccchhhhHHHH-HHHhhCCCCCCCCCH
Confidence            99999999999998754332222 2345689999999999999999999999999999 999999999987653

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.97  E-value=4.3e-32  Score=207.27  Aligned_cols=143  Identities=25%  Similarity=0.397  Sum_probs=126.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+.+.+++||||+++|+|.+.+.....   ..+++..+..++.|++.|+.|||   +.+++||||||+||+++
T Consensus       247 v~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~---~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld  320 (576)
T 2acx_A          247 VSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQ---AGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLD  320 (576)
T ss_dssp             CCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSS---CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEC
T ss_pred             eeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEe
Confidence            5788999999999999999999999998876432   45889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+||+|||++........  .....|++.|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       321 ~~g~vKL~DFGla~~~~~~~~--~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvil-yeLltG~~PF~~~~  389 (576)
T 2acx_A          321 DHGHIRISDLGLAVHVPEGQT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLL-YEMIAGQSPFQQRK  389 (576)
T ss_dssp             TTSCEEECCCTTCEECCTTCC--EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHH-HHHHHSSCSSSCSS
T ss_pred             CCCCeEEEecccceecccCcc--ccccCCCccccCHHHHcCCCCCccchHHHHHHHH-HHHHhCCCCCcccc
Confidence            999999999999877644322  1234689999999999998899999999999999 99999999998764

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.97  E-value=3e-32  Score=201.07  Aligned_cols=143  Identities=25%  Similarity=0.373  Sum_probs=116.1

Q ss_pred             CeEEEEEec----CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCC
Q 031436            1 MRLIGCCLE----TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSN   76 (159)
Q Consensus         1 v~l~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~n   76 (159)
                      |++++++..    ++.+++||||+++|+|.+.+.....   ..+++..+..++.|++.|+.|||   +++++||||||.|
T Consensus       118 v~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~N  191 (400)
T 1nxk_A          118 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN  191 (400)
T ss_dssp             CCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGG
T ss_pred             ceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcce
Confidence            467777764    5678999999999999999976422   45899999999999999999999   8999999999999


Q ss_pred             EEecC---CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           77 ILFQE---QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        77 il~~~---~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      |+++.   +..+||+|||++........  .....++..|+|||.+.+..++.++|+||||+++ |+|++|+.||.+.+
T Consensus       192 ill~~~~~~~~~kl~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~ell~g~~pf~~~~  267 (400)
T 1nxk_A          192 LLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM-YILLCGYPPFYSNH  267 (400)
T ss_dssp             EEESSSSTTCCEEECCCTTCEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHH-HHHHHSSCSCCCCT
T ss_pred             EEEecCCCCccEEEEecccccccCCCCc--cccCCCCCCccCHhhcCCCCCCCcccHHHHHHHH-HHHHhCCCCCCCCc
Confidence            99987   67899999999876543221  2234678999999999988999999999999999 99999999997654

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=4.6e-32  Score=194.85  Aligned_cols=142  Identities=19%  Similarity=0.296  Sum_probs=124.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+.+..+++|||+++|+|.+.+....    ..+++..+..++.|++.|+.|||   +.+++||||+|+||+++
T Consensus        64 v~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~  136 (321)
T 1tki_A           64 LHLHESFESMEELVMIFEFISGLDIFERINTSA----FELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQ  136 (321)
T ss_dssp             CCEEEEEEETTEEEEEECCCCCCBHHHHHTSSS----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEES
T ss_pred             CeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEc
Confidence            578999999999999999999999999986532    45889999999999999999999   89999999999999998


Q ss_pred             C--CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 E--QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~--~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .  +..+|++|||++........  .....+++.|+|||.+.+..++.++|+||+|+++ |+|++|..||.+.+
T Consensus       137 ~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~~ll~g~~pf~~~~  207 (321)
T 1tki_A          137 TRRSSTIKIIEFGQARQLKPGDN--FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLV-YVLLSGINPFLAET  207 (321)
T ss_dssp             SSSCCCEEECCCTTCEECCTTCE--EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHH-HHHHHSSCTTCCSS
T ss_pred             cCCCCCEEEEECCCCeECCCCCc--cccccCChhhcCcHHhcCCCCCchhhHHHHHHHH-HHHHhCCCCCcCCC
Confidence            6  67899999999877644332  2334678999999999988889999999999999 99999999998754

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.97  E-value=1.1e-31  Score=191.61  Aligned_cols=143  Identities=27%  Similarity=0.370  Sum_probs=122.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++||||+++|+|.+.+....    ..+++..+..++.|++.|+.|||   +++++|+||+|.||+++
T Consensus        70 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~  142 (310)
T 3s95_A           70 LKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMD----SQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVR  142 (310)
T ss_dssp             CCEEEEEEETTEEEEEEECCTTCBHHHHHHHCC----TTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEC
T ss_pred             ccEEEEEecCCeeEEEEEecCCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEEC
Confidence            578999999999999999999999999997643    45888999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCccee-------------eeeecccccccCccccccCCCCCCcceEeccccccCcceecccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRI-------------RGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAW  147 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~-------------~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p  147 (159)
                      .+..+|++|||++..........             .....+++.|+|||.+.+..++.++|+||||+++ |++++|..|
T Consensus       143 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l-~el~~g~~~  221 (310)
T 3s95_A          143 ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVL-CEIIGRVNA  221 (310)
T ss_dssp             TTSCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHH-HHHHHTCCS
T ss_pred             CCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHH-HHHhcCCCC
Confidence            99999999999987654322111             1134578899999999999999999999999999 999999999


Q ss_pred             cccC
Q 031436          148 YRSE  151 (159)
Q Consensus       148 ~~~~  151 (159)
                      +...
T Consensus       222 ~~~~  225 (310)
T 3s95_A          222 DPDY  225 (310)
T ss_dssp             STTT
T ss_pred             Ccch
Confidence            8764

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.97  E-value=3.9e-32  Score=195.60  Aligned_cols=143  Identities=24%  Similarity=0.352  Sum_probs=120.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++||||+++++|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||+|+||+++
T Consensus        84 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~  155 (327)
T 3a62_A           84 VDLIYAFQTGGKLYLILEYLSGGELFMQLERE-----GIFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLN  155 (327)
T ss_dssp             CCEEEEEECSSCEEEEEECCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEEC
T ss_pred             cceeEEEEcCCEEEEEEeCCCCCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEEC
Confidence            57899999999999999999999999988754     45788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.+|++|||++........ ......+++.|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+.
T Consensus       156 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~el~~g~~pf~~~~~  226 (327)
T 3a62_A          156 HQGHVKLTDFGLCKESIHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALM-YDMLTGAPPFTGENR  226 (327)
T ss_dssp             TTSCEEECCCSCC-----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHH-HHHHHSSCSCCCSSH
T ss_pred             CCCcEEEEeCCcccccccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHH-HHHHHCCCCCCCCCH
Confidence            999999999998865432221 12234578999999999988899999999999999 999999999987643

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.97  E-value=8.9e-32  Score=200.82  Aligned_cols=142  Identities=25%  Similarity=0.298  Sum_probs=124.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        73 v~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~-----~~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~  144 (444)
T 3soa_A           73 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAR-----EYYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLA  144 (444)
T ss_dssp             CCEEEEEECSSEEEEEECCCBCCBHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEES
T ss_pred             CeEEEEEEECCEEEEEEEeCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEe
Confidence            57899999999999999999999999988754     45889999999999999999999   89999999999999998


Q ss_pred             C---CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 E---QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~---~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .   +..+|++|||++......... .....+++.|+|||.+.+..++.++|+||+|+++ |+|++|..||.+.+
T Consensus       145 ~~~~~~~vkL~DFG~a~~~~~~~~~-~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvil-yell~G~~Pf~~~~  217 (444)
T 3soa_A          145 SKLKGAAVKLADFGLAIEVEGEQQA-WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVIL-YILLVGYPPFWDED  217 (444)
T ss_dssp             BSSTTCCEEECCCSSCBCCCTTCCB-CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHH-HHHHHSSCSCCCSS
T ss_pred             ccCCCCcEEEccCceeEEecCCCce-eecccCCcccCCHHHhcCCCCCCccccHHHHHHH-HHHHhCCCCCCCcc
Confidence            4   467999999998766543322 2234689999999999998999999999999999 99999999997654

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.97  E-value=3.4e-32  Score=205.58  Aligned_cols=146  Identities=23%  Similarity=0.360  Sum_probs=125.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++++|.+++..++||||+++|+|.+++.....   ..++...+..++.|++.||.|||   +++++||||+|+||+++
T Consensus       279 v~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~  352 (495)
T 1opk_A          279 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR---QEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVG  352 (495)
T ss_dssp             CCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCT---TTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC
T ss_pred             eeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCc---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEEC
Confidence            6789999999999999999999999999976432   45788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~  153 (159)
                      .+..+||+|||++...............++..|+|||.+.+..++.++|+||||+++ |+|++ |..||.+.+.
T Consensus       353 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l-~el~t~g~~p~~~~~~  425 (495)
T 1opk_A          353 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL-WEIATYGMSPYPGIDL  425 (495)
T ss_dssp             GGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHH-HHHHTTSCCSSTTCCG
T ss_pred             CCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHH-HHHHhCCCCCCCCCCH
Confidence            999999999999876644332222223356789999999988999999999999999 99998 9999987654

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.97  E-value=5.8e-32  Score=194.23  Aligned_cols=144  Identities=32%  Similarity=0.562  Sum_probs=125.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCC---CeEEecCCCCCE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR---PIVFRNVKPSNI   77 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~---~~~h~~l~~~ni   77 (159)
                      |+++++|.+++..+++|||+++|+|.+.+..... ....+++..+..++.|++.|+.|||   +.   +++|+||+|.||
T Consensus        90 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~ivH~Dlkp~Ni  165 (326)
T 3uim_A           90 LRLRGFCMTPTERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLH---DHCDPKIIHRDVKAANI  165 (326)
T ss_dssp             CCCCEEECCSSCCEEEEECCTTCBHHHHHHCCST-TCCCCCHHHHHHHHHHHHHHHHHHH---HSSSSCEECCCCSGGGE
T ss_pred             cceEEEEecCCceEEEEEeccCCCHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCeEeCCCchhhE
Confidence            5688999999999999999999999999976532 2245888999999999999999999   67   999999999999


Q ss_pred             EecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccc
Q 031436           78 LFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYR  149 (159)
Q Consensus        78 l~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~  149 (159)
                      +++.+..++++|||++...............++..|+|||.+.+..++.++|+||+|+++ |+|++|+.||.
T Consensus       166 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~g~~pf~  236 (326)
T 3uim_A          166 LLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVML-LELITGQRAFD  236 (326)
T ss_dssp             EECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHH-HHHHHCCCSBC
T ss_pred             EECCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHH-HHHHhCCCccc
Confidence            999999999999999876654433333445588999999999888899999999999999 99999999995

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.97  E-value=1.4e-31  Score=192.59  Aligned_cols=141  Identities=23%  Similarity=0.346  Sum_probs=123.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++||||+++++|.+.+...     ..+++..+..++.|++.|+.|||   +.+++|+||+|+||+++
T Consensus        77 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~  148 (326)
T 2y0a_A           77 ITLHEVYENKTDVILILELVAGGELFDFLAEK-----ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLL  148 (326)
T ss_dssp             CCEEEEEECSSEEEEEEECCCSCBHHHHHTTS-----SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEES
T ss_pred             CcEEEEEEeCCEEEEEEEcCCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEe
Confidence            57899999999999999999999999998653     46889999999999999999999   89999999999999998


Q ss_pred             CCC----ceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQS----VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~----~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+.    .+|++|||++........  .....+++.|+|||.+.+..++.++|+||+|+++ |+|++|..||.+.+
T Consensus       149 ~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~~ll~g~~pf~~~~  221 (326)
T 2y0a_A          149 DRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT-YILLSGASPFLGDT  221 (326)
T ss_dssp             CSSSSSCCEEECCCTTCEECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHH-HHHHHSCCSSCCSS
T ss_pred             cCCCCCCCEEEEECCCCeECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHH-HHHHHCcCCCCCCC
Confidence            766    799999999876643222  1234588999999999988999999999999999 99999999997654

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.97  E-value=8.5e-32  Score=193.89  Aligned_cols=144  Identities=18%  Similarity=0.228  Sum_probs=123.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++..++..++||||+ +++|.+.+...+    ..+++..+..++.|++.|+.|||   +.+++||||||+||+++
T Consensus        68 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~  139 (330)
T 2izr_A           68 PQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCD----RTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIG  139 (330)
T ss_dssp             CCEEEEEEETTEEEEEEECC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEC
T ss_pred             CEEEEEEecCCccEEEEEeC-CCCHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeec
Confidence            46888999989999999999 899999987542    46889999999999999999999   89999999999999998


Q ss_pred             CCCc-----eEEEecCCCcccCCCcce------eeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccc
Q 031436           81 EQSV-----AKLFDFSYSESIPEGETR------IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYR  149 (159)
Q Consensus        81 ~~~~-----~~l~d~~~~~~~~~~~~~------~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~  149 (159)
                      .+..     +|++|||++.........      ......++..|+|||.+.+..++.++|+||||+++ |+|++|+.||.
T Consensus       140 ~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il-~ell~g~~Pf~  218 (330)
T 2izr_A          140 RPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMF-MYFLRGSLPWQ  218 (330)
T ss_dssp             CGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHH-HHHHHSSCTTT
T ss_pred             cCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHH-HHHhcCCCCcc
Confidence            8776     999999998765432211      11345688999999999999999999999999999 99999999998


Q ss_pred             cCCC
Q 031436          150 SEDW  153 (159)
Q Consensus       150 ~~~~  153 (159)
                      +.+.
T Consensus       219 ~~~~  222 (330)
T 2izr_A          219 GLKA  222 (330)
T ss_dssp             TCCC
T ss_pred             cccc
Confidence            8543

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.97  E-value=1.2e-31  Score=195.65  Aligned_cols=141  Identities=30%  Similarity=0.375  Sum_probs=122.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        91 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~  162 (362)
T 2bdw_A           91 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLA  162 (362)
T ss_dssp             CCEEEEEECSSEEEEEECCCCSCBHHHHHTTC-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEES
T ss_pred             CeEEEEEEeCCEEEEEEecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEe
Confidence            57899999999999999999999999988653     45788999999999999999999   89999999999999997


Q ss_pred             CC---CceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQ---SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+   ..+|++|||++........  .....+++.|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       163 ~~~~~~~~kl~DfG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~~ll~g~~Pf~~~~  234 (362)
T 2bdw_A          163 SKAKGAAVKLADFGLAIEVNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL-YILLVGYPPFWDED  234 (362)
T ss_dssp             CSSTTCCEEECCCTTCBCCTTCCS--CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             cCCCCCCEEEeecCcceEecCCcc--cccCCCCccccCHHHHccCCCCchhhHHHHHHHH-HHHHHCCCCCCCCC
Confidence            64   3599999999876643322  1234688999999999998999999999999999 99999999997754

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.97  E-value=1.8e-31  Score=190.83  Aligned_cols=145  Identities=28%  Similarity=0.377  Sum_probs=116.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCC--eEEecCCCCCEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRP--IVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~--~~h~~l~~~nil   78 (159)
                      |++++++.+.+..++||||+++|+|.+.+.....  ...+++..+..++.|++.|+.|||   +.+  ++||||||+||+
T Consensus        97 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIl  171 (309)
T 3p86_A           97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGA--REQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLL  171 (309)
T ss_dssp             CCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTH--HHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEE
T ss_pred             eeEEEEEEECCceEEEEecCCCCcHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEE
Confidence            5789999999999999999999999999876421  123788889999999999999999   888  999999999999


Q ss_pred             ecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           79 FQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        79 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ++.+..+|++|||++........ ......++..|+|||.+.+..++.++|+||||+++ |+|++|+.||...+
T Consensus       172 l~~~~~~kL~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~elltg~~Pf~~~~  243 (309)
T 3p86_A          172 VDKKYTVKVCDFGLSRLKASTFL-SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVIL-WELATLQQPWGNLN  243 (309)
T ss_dssp             ECTTCCEEECCCC------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHH-HHHHHCCCTTTTSC
T ss_pred             EeCCCcEEECCCCCCcccccccc-ccccCCCCccccChhhhcCCCCCchhhHHHHHHHH-HHHHhCCCCCCCCC
Confidence            99999999999998865433221 12234678899999999999999999999999999 99999999998754

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.97  E-value=2.9e-31  Score=190.40  Aligned_cols=147  Identities=35%  Similarity=0.560  Sum_probs=125.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++++|.+++..+++|||+++|+|.+.+..... ....+++..+..++.|++.|+.|||   +++++|+||+|+||+++
T Consensus        98 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~  173 (321)
T 2qkw_B           98 VSLIGFCDERNEMILIYKYMENGNLKRHLYGSDL-PTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLD  173 (321)
T ss_dssp             CCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCC-CSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEEC
T ss_pred             eeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCC-CccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEEC
Confidence            5789999999999999999999999998865432 2245888999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..+|++|||++........ .......++..|+|||.+.+..++.++|+||||+++ |+|++|+.||....
T Consensus       174 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il-~ell~g~~p~~~~~  245 (321)
T 2qkw_B          174 ENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVL-FEVLCARSAIVQSL  245 (321)
T ss_dssp             TTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHH-HHHHHCCTTCSCSS
T ss_pred             CCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHH-HHHHhCCCcccccC
Confidence            999999999998875433221 112234578899999999888999999999999999 99999999997643

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.97  E-value=1.8e-31  Score=196.10  Aligned_cols=142  Identities=21%  Similarity=0.300  Sum_probs=123.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++||||+++|+|.+.+....    ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus       111 v~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~  183 (387)
T 1kob_A          111 INLHDAFEDKYEMVLILEFLSGGELFDRIAAED----YKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCE  183 (387)
T ss_dssp             CCEEEEEECSSEEEEEEECCCCCBHHHHTTCTT----CCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEES
T ss_pred             CeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEe
Confidence            578999999999999999999999999886532    46889999999999999999999   89999999999999997


Q ss_pred             C--CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 E--QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~--~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .  ...+|++|||++........  .....++..|+|||.+.+..++.++|+||+|+++ |+|++|..||.+.+
T Consensus       184 ~~~~~~vkL~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il-~elltg~~Pf~~~~  254 (387)
T 1kob_A          184 TKKASSVKIIDFGLATKLNPDEI--VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLG-YVLLSGLSPFAGED  254 (387)
T ss_dssp             STTCCCEEECCCTTCEECCTTSC--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHH-HHHHHSCCSSCCSS
T ss_pred             cCCCCceEEEecccceecCCCcc--eeeeccCCCccCchhccCCCCCCcccEeeHhHHH-HHHHhCCCCCCCCC
Confidence            4  46799999999887654332  2234688999999999988899999999999999 99999999998754

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.97  E-value=2.3e-31  Score=193.47  Aligned_cols=140  Identities=22%  Similarity=0.324  Sum_probs=122.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++...+..++||||+ +++|.+.+.....   ..++...+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        99 v~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~  171 (360)
T 3llt_A           99 VKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNY---NGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLD  171 (360)
T ss_dssp             CCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEES
T ss_pred             ecccceeeECCeeEEEEcCC-CCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEc
Confidence            57899999999999999999 8999999876432   45888999999999999999999   89999999999999997


Q ss_pred             C-------------------------CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccc
Q 031436           81 E-------------------------QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDG  135 (159)
Q Consensus        81 ~-------------------------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~  135 (159)
                      .                         +..+|++|||++.......    ....++..|+|||.+.+..++.++|+||+|+
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~  247 (360)
T 3llt_A          172 DPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQYRAPEVILNLGWDVSSDMWSFGC  247 (360)
T ss_dssp             CTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHH
T ss_pred             cccccccccchhcccccccccccccCCCCEEEEeccCceecCCCC----cCccCcccccCcHHHcCCCCCCccchHHHHH
Confidence            5                         6789999999987543322    2345788999999999999999999999999


Q ss_pred             cccCcceecccccccCC
Q 031436          136 SRDSGHLTGRAWYRSED  152 (159)
Q Consensus       136 ~~~~~~~~g~~p~~~~~  152 (159)
                      ++ |+|++|+.||.+.+
T Consensus       248 il-~ell~g~~pf~~~~  263 (360)
T 3llt_A          248 VL-AELYTGSLLFRTHE  263 (360)
T ss_dssp             HH-HHHHHSSCSCCCSS
T ss_pred             HH-HHHHHCCCCCCCCc
Confidence            99 99999999998754

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.97  E-value=8.3e-32  Score=193.81  Aligned_cols=142  Identities=23%  Similarity=0.395  Sum_probs=105.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||+|+||+++
T Consensus        69 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~  140 (325)
T 3kn6_A           69 VKLHEVFHDQLHTFLVMELLNGGELFERIKKK-----KHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFT  140 (325)
T ss_dssp             CCEEEEEECSSEEEEEECCCCSCBHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEE
T ss_pred             eEEEEEEEcCCEEEEEEEccCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEe
Confidence            57899999999999999999999999998764     46889999999999999999999   89999999999999997


Q ss_pred             CCC---ceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQS---VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~---~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+.   .+|++|||++......... .....++..|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       141 ~~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il-~~ll~g~~pf~~~~  213 (325)
T 3kn6_A          141 DENDNLEIKIIDFGFARLKPPDNQP-LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVIL-YTMLSGQVPFQSHD  213 (325)
T ss_dssp             C----CEEEECCCTTCEECCC-----------------------CCCCHHHHHHHHHHHH-HHHHHSSCTTC---
T ss_pred             cCCCcccEEEeccccceecCCCCCc-ccccCCCcCccCHHHhcCCCCCCccchHHHHHHH-HHHHhCCCCCCCCc
Confidence            654   7999999998755433222 2234568899999999999999999999999999 99999999998754

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.97  E-value=3.8e-32  Score=198.14  Aligned_cols=143  Identities=14%  Similarity=0.144  Sum_probs=120.3

Q ss_pred             CeEEEEEecC----CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCC
Q 031436            1 MRLIGCCLET----ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSN   76 (159)
Q Consensus         1 v~l~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~n   76 (159)
                      |++++++.+.    ...++||||+ +++|.+++....    ..+++..+..++.|++.||.|||   +.+++||||||+|
T Consensus       111 v~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~----~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~N  182 (364)
T 3op5_A          111 PKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA----KRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASN  182 (364)
T ss_dssp             CCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGG
T ss_pred             CeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHH
Confidence            5678888764    3479999999 999999987642    46889999999999999999999   8999999999999


Q ss_pred             EEec--CCCceEEEecCCCcccCCCcce------eeeeecccccccCccccccCCCCCCcceEeccccccCcceeccccc
Q 031436           77 ILFQ--EQSVAKLFDFSYSESIPEGETR------IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWY  148 (159)
Q Consensus        77 il~~--~~~~~~l~d~~~~~~~~~~~~~------~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~  148 (159)
                      |+++  .+..+||+|||++.........      ......++..|+|||.+.+..++.++|+||||+++ |+|++|+.||
T Consensus       183 ill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l-~el~~g~~Pf  261 (364)
T 3op5_A          183 LLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCM-IQWLTGHLPW  261 (364)
T ss_dssp             EEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHH-HHHHHSCCTT
T ss_pred             EEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHH-HHHHhCCCCc
Confidence            9998  7789999999998655332111      11223488999999999999999999999999999 9999999999


Q ss_pred             ccCC
Q 031436          149 RSED  152 (159)
Q Consensus       149 ~~~~  152 (159)
                      .+..
T Consensus       262 ~~~~  265 (364)
T 3op5_A          262 EDNL  265 (364)
T ss_dssp             GGGT
T ss_pred             cccc
Confidence            8643

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.97  E-value=2.2e-31  Score=191.23  Aligned_cols=141  Identities=21%  Similarity=0.362  Sum_probs=123.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++..++..+++|||+++++|.+.+..      ..+++..+..++.|++.|+.|||   +.+++|+||+|.||+++
T Consensus       105 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~------~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~  175 (321)
T 2c30_A          105 VEMYKSYLVGEELWVLMEFLQGGALTDIVSQ------VRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLT  175 (321)
T ss_dssp             CCEEEEEEETTEEEEEECCCCSCBHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEC
T ss_pred             ceEEEEEEECCEEEEEEecCCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEC
Confidence            5788999999999999999999999998854      35788999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..+|++|||++......... .....++..|+|||.+.+..++.++|+||||+++ |+|++|+.||.+.+
T Consensus       176 ~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il-~el~~g~~pf~~~~  245 (321)
T 2c30_A          176 LDGRVKLSDFGFCAQISKDVPK-RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMV-IEMVDGEPPYFSDS  245 (321)
T ss_dssp             TTCCEEECCCTTCEECCSSSCC-BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHH-HHHHHSSCTTTTSC
T ss_pred             CCCcEEEeeeeeeeecccCccc-cccccCCccccCHhhhcCCCCCchhhHHHHHHHH-HHHHhCCCCCCCCC
Confidence            9999999999998766443222 2234688999999999988899999999999999 99999999997653

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.97  E-value=4.8e-32  Score=198.54  Aligned_cols=144  Identities=24%  Similarity=0.361  Sum_probs=122.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++++|.+++..++||||+++|+|.+.+....    ..++...+..++.|++.|+.|||   +++++||||+|+||+++
T Consensus       175 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~  247 (377)
T 3cbl_A          175 VRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG----ARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVT  247 (377)
T ss_dssp             CCEEEEECSSSSCEEEEECCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC
T ss_pred             EEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEc
Confidence            578999999999999999999999999987532    45788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceee-eeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIR-GRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~-~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..+|++|||++........... ....++..|+|||.+.+..++.++|+||||+++ |++++ |..||.+.+
T Consensus       248 ~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il-~el~t~g~~p~~~~~  320 (377)
T 3cbl_A          248 EKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILL-WETFSLGASPYPNLS  320 (377)
T ss_dssp             TTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHH-HHHHTTSCCSSTTSC
T ss_pred             CCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHH-HHHHhCCCCCCCCCC
Confidence            999999999999876543221111 122346679999999988899999999999999 99998 999998754

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.97  E-value=1.2e-31  Score=187.73  Aligned_cols=144  Identities=19%  Similarity=0.278  Sum_probs=124.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..+++|||+++++|.+.+....    ..+++..+..++.|++.|+.+||   +.+++|+||+|.||+++
T Consensus        66 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~  138 (268)
T 3sxs_A           66 VKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHG----KGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVD  138 (268)
T ss_dssp             CCEEEEECSSSSEEEEEECCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEEC
T ss_pred             eeEEEEEccCCceEEEEEccCCCcHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEEC
Confidence            578999999999999999999999999987542    45888999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..++++|||.+...............++..|+|||.+.+..++.++|+||+|+++ +++++ |+.||...+
T Consensus       139 ~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~~g~~p~~~~~  210 (268)
T 3sxs_A          139 RDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILM-WEVFSLGKMPYDLYT  210 (268)
T ss_dssp             TTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHH-HHHHTTTCCTTTTSC
T ss_pred             CCCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHH-HHHHcCCCCCccccC
Confidence            999999999999876654433322233456679999999988899999999999999 99998 999997654

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.97  E-value=1.4e-31  Score=192.54  Aligned_cols=144  Identities=23%  Similarity=0.284  Sum_probs=121.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++||||+++|+|.+++....    ..+++..+..++.|++.|+.|||   +++++|+||+|+||+++
T Consensus       113 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~  185 (325)
T 3kul_A          113 IRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD----GQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVD  185 (325)
T ss_dssp             CCEEEEECGGGCCEEEEECCTTCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC
T ss_pred             CcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEC
Confidence            578999999999999999999999999986543    45888999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcce--eeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..++++|||++.........  ......++..|+|||.+.+..++.++|+||||+++ |+|++ |+.||.+.+
T Consensus       186 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il-~ell~~g~~p~~~~~  259 (325)
T 3kul_A          186 SNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVM-WEVLAYGERPYWNMT  259 (325)
T ss_dssp             TTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHH-HHHHTTSCCTTTTSC
T ss_pred             CCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHH-HHHHcCCCCCcccCC
Confidence            9999999999998766443221  11222345679999999988999999999999999 99998 999997654

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.97  E-value=2.5e-31  Score=195.27  Aligned_cols=147  Identities=18%  Similarity=0.218  Sum_probs=123.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++||||+++|+|.+.+.....   ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        89 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~  162 (389)
T 3gni_B           89 VPYRATFIADNELWVVTSFMAYGSAKDLICTHFM---DGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILIS  162 (389)
T ss_dssp             CCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCT---TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEC
T ss_pred             CcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcc---cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEc
Confidence            6789999999999999999999999999876432   45888999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcce------eeeeecccccccCcccccc--CCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETR------IRGRVMGTFGYLPPEYIAT--GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~------~~~~~~~~~~~~ape~~~~--~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+|++|||.+.........      ......++..|+|||.+.+  ..++.++|+||+||++ |+|++|+.||.+.+
T Consensus       163 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il-~el~~g~~pf~~~~  241 (389)
T 3gni_B          163 VDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITA-CELANGHVPFKDMP  241 (389)
T ss_dssp             TTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHH-HHHHHSSCTTTTCC
T ss_pred             CCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHH-HHHHHCCCCCCCCC
Confidence            9999999999976543221110      1112356788999999987  5789999999999999 99999999998765


Q ss_pred             Cc
Q 031436          153 WK  154 (159)
Q Consensus       153 ~~  154 (159)
                      ..
T Consensus       242 ~~  243 (389)
T 3gni_B          242 AT  243 (389)
T ss_dssp             ST
T ss_pred             HH
Confidence            44

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=8.5e-32  Score=195.84  Aligned_cols=143  Identities=22%  Similarity=0.295  Sum_probs=121.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+.+..++||||+++|+|.+.+...     ..+++..+..++.|++.||.|||   +++++||||||.||+++
T Consensus       122 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~  193 (355)
T 1vzo_A          122 VTLHYAFQTETKLHLILDYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLD  193 (355)
T ss_dssp             CCEEEEEEETTEEEEEECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEC
T ss_pred             eEEEEEEeeCceEEEEeecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEC
Confidence            56788999989999999999999999998754     45788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc--CCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT--GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~--~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..+||+|||++...............++..|+|||.+.+  ..++.++|+||||+++ |+|++|+.||...+
T Consensus       194 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il-~ell~g~~pf~~~~  266 (355)
T 1vzo_A          194 SNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLM-YELLTGASPFTVDG  266 (355)
T ss_dssp             TTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHH-HHHHHSSCTTSCTT
T ss_pred             CCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHH-HHHHHCCCCCccCC
Confidence            99999999999887654333222234568899999999985  3478999999999999 99999999997654

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.97  E-value=7.6e-32  Score=193.86  Aligned_cols=144  Identities=25%  Similarity=0.376  Sum_probs=123.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..+++|||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++|+||+|+||+++
T Consensus        68 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~  139 (323)
T 3tki_A           68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLD  139 (323)
T ss_dssp             CCEEEEEECSSEEEEEEECCTTEEGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC
T ss_pred             CeEEEEEecCCeEEEEEEcCCCCcHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEe
Confidence            57899999999999999999999999988643     45889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCC-CCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDC-NEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~-~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+..+|++|||++........ .......++..|+|||.+.+..+ +.++|+||+|+++ |+|++|+.||...+.
T Consensus       140 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il-~~ll~g~~pf~~~~~  213 (323)
T 3tki_A          140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL-TAMLAGELPWDQPSD  213 (323)
T ss_dssp             TTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHH-HHHHHSSCSCSSSCT
T ss_pred             CCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHH-HHHHhCCCCCCCCch
Confidence            999999999999875432221 11233467889999999987775 7789999999999 999999999987543

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.97  E-value=4.6e-31  Score=187.18  Aligned_cols=143  Identities=16%  Similarity=0.180  Sum_probs=122.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.++...+++|||+ +++|.+.+....    ..+++..+..++.|++.|+.|||   +++++|+||+|+||+++
T Consensus        69 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~  140 (298)
T 1csn_A           69 PNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCG----RKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIG  140 (298)
T ss_dssp             CCEEEEEEETTEEEEEEECC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEEC
T ss_pred             CeEEeecCCCceeEEEEEec-CCCHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEec
Confidence            46788888889999999999 899999997542    45889999999999999999999   99999999999999997


Q ss_pred             CCCc-----eEEEecCCCcccCCCcce------eeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccc
Q 031436           81 EQSV-----AKLFDFSYSESIPEGETR------IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYR  149 (159)
Q Consensus        81 ~~~~-----~~l~d~~~~~~~~~~~~~------~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~  149 (159)
                      .+..     ++++|||++.........      ......++..|+|||.+.+..++.++|+||||+++ |+|++|+.||.
T Consensus       141 ~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il-~el~~g~~pf~  219 (298)
T 1csn_A          141 RPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVF-MYFLRGSLPWQ  219 (298)
T ss_dssp             CSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHH-HHHHHSSCTTS
T ss_pred             cCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHH-HHHHcCCCCcc
Confidence            6654     999999998765433211      12344678999999999999999999999999999 99999999998


Q ss_pred             cCC
Q 031436          150 SED  152 (159)
Q Consensus       150 ~~~  152 (159)
                      +.+
T Consensus       220 ~~~  222 (298)
T 1csn_A          220 GLK  222 (298)
T ss_dssp             SCC
T ss_pred             hhh
Confidence            754

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.97  E-value=1.7e-31  Score=194.01  Aligned_cols=145  Identities=19%  Similarity=0.242  Sum_probs=122.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++||||+++++|.+.+..... ....+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        89 v~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~  164 (351)
T 3c0i_A           89 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLA  164 (351)
T ss_dssp             CCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC
T ss_pred             CcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEe
Confidence            5789999999999999999999999887754211 1135788899999999999999999   89999999999999997


Q ss_pred             CCC---ceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           81 EQS---VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~~~---~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .+.   .+|++|||++........ ......+++.|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.
T Consensus       165 ~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~~ll~g~~pf~~~  236 (351)
T 3c0i_A          165 SKENSAPVKLGGFGVAIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVIL-FILLSGCLPFYGT  236 (351)
T ss_dssp             SSSTTCCEEECCCTTCEECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHH-HHHHHSSCSSCSS
T ss_pred             cCCCCCcEEEecCcceeEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHH-HHHHHCCCCCCCc
Confidence            654   499999999876654322 12234688999999999998899999999999999 9999999999764

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.97  E-value=9.5e-32  Score=188.47  Aligned_cols=144  Identities=25%  Similarity=0.409  Sum_probs=123.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..+++|||+++++|.+.+....    ..++...+..++.|++.|+.+||   +.+++|+|++|.||+++
T Consensus        68 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~  140 (269)
T 4hcu_A           68 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR----GLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVG  140 (269)
T ss_dssp             CCEEEEECSSSSEEEEEECCTTCBHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEC
T ss_pred             eeEEEEEecCCceEEEEEeCCCCcHHHHHHhcC----cccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEc
Confidence            578999999999999999999999999986543    45788999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..++++|||++...............++..|+|||.+.+..++.++|+||+|+++ +++++ |+.||...+
T Consensus       141 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~~ll~~g~~p~~~~~  212 (269)
T 4hcu_A          141 ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM-WEVFSEGKIPYENRS  212 (269)
T ss_dssp             GGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTSCCTTTTCC
T ss_pred             CCCCEEeccccccccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHH-HHHhcCCCCCCCCCC
Confidence            999999999999876543322222223456679999999989999999999999999 99999 999998754

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.97  E-value=1.9e-31  Score=192.77  Aligned_cols=142  Identities=27%  Similarity=0.347  Sum_probs=123.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+.+..++||||+ +|+|.+.+...     ..+++..+..++.|++.|+.|||   +.+++||||||+||+++
T Consensus        72 v~l~~~~~~~~~~~lv~E~~-~g~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~  142 (336)
T 3h4j_B           72 IKLYDVITTPTDIVMVIEYA-GGELFDYIVEK-----KRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLD  142 (336)
T ss_dssp             CCEEEEEECSSEEEEEECCC-CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEEC
T ss_pred             CeEEEEEEeCCEEEEEEECC-CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEc
Confidence            57899999999999999999 68999988654     45888999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCC-CCCcceEeccccccCcceecccccccCCCc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC-NEKCDVYSFDGSRDSGHLTGRAWYRSEDWK  154 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~-~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~  154 (159)
                      .+..+|++|||++.........  ....+++.|+|||.+.+..+ ++++|+||+|+++ |+|++|+.||.+....
T Consensus       143 ~~~~~kl~DFG~s~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il-~~ll~g~~Pf~~~~~~  214 (336)
T 3h4j_B          143 DNLNVKIADFGLSNIMTDGNFL--KTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVL-YVMLVGRLPFDDEFIP  214 (336)
T ss_dssp             TTCCEEECCSSCTBTTTTSBTT--CCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHH-HHHHHSSCSSBCSSST
T ss_pred             CCCCEEEEEeccceeccCCccc--ccccCCcCcCCHHHHcCCCCCCCccchhHHHHHH-HHHHhCCCCCCCccHH
Confidence            9999999999998765443221  23468899999999988776 7899999999999 9999999999876543

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.97  E-value=4.6e-31  Score=193.59  Aligned_cols=149  Identities=23%  Similarity=0.349  Sum_probs=126.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCC-----------CCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQP-----------NFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVF   69 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-----------~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h   69 (159)
                      |+++++|.+++..++||||+++|+|.+++......           ....+++..+..++.|++.|+.|||   +.+++|
T Consensus       138 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH  214 (382)
T 3tt0_A          138 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIH  214 (382)
T ss_dssp             CCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCC
T ss_pred             hhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEec
Confidence            57899999999999999999999999998764321           1245889999999999999999999   899999


Q ss_pred             ecCCCCCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccc
Q 031436           70 RNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAW  147 (159)
Q Consensus        70 ~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p  147 (159)
                      |||||+||+++.+..+||+|||++........ .......++..|+|||.+.+..++.++|+||||+++ ++|++ |..|
T Consensus       215 ~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il-~ellt~g~~p  293 (382)
T 3tt0_A          215 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL-WEIFTLGGSP  293 (382)
T ss_dssp             SCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHH-HHHHTTSCCS
T ss_pred             CCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHH-HHHHhCCCCC
Confidence            99999999999999999999999876543221 112233456789999999999999999999999999 99999 9999


Q ss_pred             cccCCC
Q 031436          148 YRSEDW  153 (159)
Q Consensus       148 ~~~~~~  153 (159)
                      |.+.+.
T Consensus       294 ~~~~~~  299 (382)
T 3tt0_A          294 YPGVPV  299 (382)
T ss_dssp             STTCCH
T ss_pred             CCCCCH
Confidence            987643

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.97  E-value=3.2e-31  Score=190.55  Aligned_cols=144  Identities=25%  Similarity=0.430  Sum_probs=121.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++++|. ++..++++||+.+|+|.+.+...+    ..+++..+..++.|++.|+.|||   +++++||||||.||+++
T Consensus        78 v~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~  149 (325)
T 3kex_A           78 VRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHR----GALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLK  149 (325)
T ss_dssp             CCEEEEEC-BSSEEEEEECCTTCBSHHHHHSSG----GGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEES
T ss_pred             CeEEEEEc-CCccEEEEEeCCCCCHHHHHHHcc----ccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEEC
Confidence            57888886 467899999999999999987642    46788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcce-eeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETR-IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~  153 (159)
                      .++.+|++|||++......... ......++..|+|||.+.+..++.++|+||||+++ |++++ |+.||.+.+.
T Consensus       150 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~el~~~g~~p~~~~~~  223 (325)
T 3kex_A          150 SPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTV-WELMTFGAEPYAGLRL  223 (325)
T ss_dssp             SSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTSCCTTTTSCT
T ss_pred             CCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHH-HHHHhCCCCCccccCH
Confidence            9999999999998876543321 22334567789999999988999999999999999 99999 9999987653

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.97  E-value=1e-30  Score=186.45  Aligned_cols=142  Identities=22%  Similarity=0.333  Sum_probs=121.3

Q ss_pred             CeEEEEEecCC-----CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC
Q 031436            1 MRLIGCCLETE-----NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS   75 (159)
Q Consensus         1 v~l~~~~~~~~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~   75 (159)
                      |+++++|....     ..++++|++. ++|.+.+.....   ..+++..+..++.|++.|+.|||   +++++|+||||+
T Consensus        77 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~  149 (308)
T 3g33_A           77 VRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPP---PGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPE  149 (308)
T ss_dssp             CCEEEEEEECCSSSEEEEEEEEECCC-CBHHHHHHTCCT---TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTT
T ss_pred             EEeeeeeeccCCCCceeEEEEehhhh-cCHHHHHhhccC---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHH
Confidence            57888887655     4789999996 699999876532   44889999999999999999999   899999999999


Q ss_pred             CEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           76 NILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        76 nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ||+++.+..+|++|||++........  .....++..|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       150 Nil~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~~l~~g~~pf~~~~  223 (308)
T 3g33_A          150 NILVTSGGTVKLADFGLARIYSYQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIF-AEMFRRKPLFCGNS  223 (308)
T ss_dssp             TEEECTTSCEEECSCSCTTTSTTCCC--SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHH-HHTTTSSCSCCCSS
T ss_pred             HEEEcCCCCEEEeeCccccccCCCcc--cCCccccccccCchHHcCCCCCchHHHHHHHHHH-HHHHhCCCCCCCCC
Confidence            99999999999999999876543222  2234678999999999999999999999999999 99999999997654

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.97  E-value=2.6e-31  Score=194.52  Aligned_cols=142  Identities=25%  Similarity=0.319  Sum_probs=122.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe-
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF-   79 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~-   79 (159)
                      |+++++|.+.+..++||||+++++|.+.+....    ..+++.....++.|++.|+.|||   +.+++||||||.||++ 
T Consensus       149 v~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~  221 (373)
T 2x4f_A          149 IQLYDAFESKNDIVLVMEYVDGGELFDRIIDES----YNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCV  221 (373)
T ss_dssp             CCEEEEEECSSEEEEEEECCTTCEEHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEE
T ss_pred             CeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEe
Confidence            578999999999999999999999998886432    45788889999999999999999   8999999999999999 


Q ss_pred             -cCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           80 -QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        80 -~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                       +.+..+|++|||++.........  ....+++.|+|||.+.+..++.++|+||||+++ |+|++|+.||.+.+
T Consensus       222 ~~~~~~~kl~DFG~a~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~elltg~~pf~~~~  292 (373)
T 2x4f_A          222 NRDAKQIKIIDFGLARRYKPREKL--KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIA-YMLLSGLSPFLGDN  292 (373)
T ss_dssp             ETTTTEEEECCCSSCEECCTTCBC--CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHH-HHHHHSSCTTCCSS
T ss_pred             cCCCCcEEEEeCCCceecCCcccc--ccccCCCcEeChhhccCCCCCcHHhHHHHHHHH-HHHHhCCCCCCCCC
Confidence             45568999999998766443221  234588999999999988899999999999999 99999999998754

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.97  E-value=4.2e-31  Score=197.54  Aligned_cols=143  Identities=24%  Similarity=0.359  Sum_probs=120.7

Q ss_pred             CeEEEEEecCC-CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe
Q 031436            1 MRLIGCCLETE-NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~   79 (159)
                      |++++++.+.. ..++||||+++|+|.+++.....   ..++...+..++.|++.|+.|||   +++++||||+|+||++
T Consensus       249 v~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill  322 (450)
T 1k9a_A          249 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLV  322 (450)
T ss_dssp             CCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCT---TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred             EEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEE
Confidence            57899987655 78999999999999999976432   34688889999999999999999   8999999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCCc
Q 031436           80 QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDWK  154 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~~  154 (159)
                      +.+..+|++|||++.......    ....++..|+|||.+.+..++.++|+||||+++ |+|++ |+.||.+.+..
T Consensus       323 ~~~~~~kl~DfG~a~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l-~el~t~g~~P~~~~~~~  393 (450)
T 1k9a_A          323 SEDNVAKVSDFGLTKEASSTQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILL-WEIYSFGRVPYPRIPLK  393 (450)
T ss_dssp             CTTSCEEECCCTTCEECC----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHH-HHHHTTTCCSSTTSCTT
T ss_pred             CCCCCEEEeeCCCcccccccc----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHH-HHHHhCCCCCCCCCCHH
Confidence            999999999999987543221    122457789999999999999999999999999 99998 99999876543

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.97  E-value=5.7e-32  Score=202.44  Aligned_cols=144  Identities=24%  Similarity=0.346  Sum_probs=120.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++. ++..++||||+++|+|.+++.....   ..++...+..++.|++.|+.|||   +++++||||+|+||+++
T Consensus       246 v~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~  318 (454)
T 1qcf_A          246 VKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEG---SKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVS  318 (454)
T ss_dssp             CCEEEEEC-SSSCEEEECCCTTCBHHHHHHSHHH---HTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEEC
T ss_pred             eeEEEEEe-CCccEEEEeecCCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEEC
Confidence            57888886 5788999999999999999975321   34677888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..+||+|||++...............++..|+|||.+.+..++.++|+||||+++ |+|++ |+.||.+.+
T Consensus       319 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l-~el~t~g~~P~~~~~  390 (454)
T 1qcf_A          319 ASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL-MEIVTYGRIPYPGMS  390 (454)
T ss_dssp             TTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTSCCSSTTCC
T ss_pred             CCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHH-HHHHhCCCCCCCCCC
Confidence            999999999999876643221111222356789999999988999999999999999 99999 999998754

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=4.5e-31  Score=193.93  Aligned_cols=142  Identities=24%  Similarity=0.327  Sum_probs=117.1

Q ss_pred             CeEEEEEecCC--CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLETE--NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      |++++++...+  ..++||||+. ++|.+.+..      ..++...+..++.|++.|+.|||   +.+++||||||+||+
T Consensus        72 v~l~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIl  141 (388)
T 3oz6_A           72 VNLLNVLRADNDRDVYLVFDYME-TDLHAVIRA------NILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNIL  141 (388)
T ss_dssp             CCEEEEEECTTSSCEEEEEECCS-EEHHHHHHH------TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEE
T ss_pred             CeeeeEEecCCCCEEEEEecccC-cCHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeE
Confidence            57888887544  6899999996 699888865      35778888899999999999999   899999999999999


Q ss_pred             ecCCCceEEEecCCCcccCCCc--------------------ceeeeeecccccccCcccccc-CCCCCCcceEeccccc
Q 031436           79 FQEQSVAKLFDFSYSESIPEGE--------------------TRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSR  137 (159)
Q Consensus        79 ~~~~~~~~l~d~~~~~~~~~~~--------------------~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~  137 (159)
                      ++.+..+|++|||++.......                    ........+++.|+|||.+.+ ..++.++|+||+||++
T Consensus       142 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il  221 (388)
T 3oz6_A          142 LNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCIL  221 (388)
T ss_dssp             ECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHH
T ss_pred             EcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHH
Confidence            9999999999999987543210                    111233468899999999986 5789999999999999


Q ss_pred             cCcceecccccccCCC
Q 031436          138 DSGHLTGRAWYRSEDW  153 (159)
Q Consensus       138 ~~~~~~g~~p~~~~~~  153 (159)
                       ++|++|+.||.+.+.
T Consensus       222 -~ell~g~~pf~~~~~  236 (388)
T 3oz6_A          222 -GEILCGKPIFPGSST  236 (388)
T ss_dssp             -HHHHHSSCSCCCSSH
T ss_pred             -HHHHhCCCCCCCCCH
Confidence             999999999988653

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.97  E-value=4.2e-31  Score=191.84  Aligned_cols=142  Identities=27%  Similarity=0.317  Sum_probs=115.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++++|.+++..+++|||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +.+++|+||+|+||+++
T Consensus       111 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~  182 (349)
T 2w4o_A          111 IKLKEIFETPTEISLVLELVTGGELFDRIVEK-----GYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYA  182 (349)
T ss_dssp             CCEEEEEECSSEEEEEECCCCSCBHHHHHTTC-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEES
T ss_pred             cceeeeEecCCeEEEEEEeCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEe
Confidence            57899999999999999999999999988653     45788999999999999999999   89999999999999997


Q ss_pred             C---CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 E---QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~---~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .   +..+|++|||++.......  ......++..|+|||.+.+..++.++|+||||+++ |+|++|..||...+.
T Consensus       183 ~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~ell~g~~pf~~~~~  255 (349)
T 2w4o_A          183 TPAPDAPLKIADFGLSKIVEHQV--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIIT-YILLCGFEPFYDERG  255 (349)
T ss_dssp             SSSTTCCEEECCCC------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHH-HHHHHSSCTTCCTTC
T ss_pred             cCCCCCCEEEccCccccccCccc--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHH-HHHHhCCCCCCCCcc
Confidence            5   6789999999887653322  12234578899999999998999999999999999 999999999976543

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.97  E-value=5e-31  Score=198.15  Aligned_cols=142  Identities=25%  Similarity=0.356  Sum_probs=124.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+.+..++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        79 v~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~  150 (476)
T 2y94_A           79 IKLYQVISTPSDIFMVMEYVSGGELFDYICKN-----GRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLD  150 (476)
T ss_dssp             CCEEEEEECSSEEEEEEECCSSEEHHHHTTSS-----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEC
T ss_pred             CcEEEEEEECCEEEEEEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEe
Confidence            57899999999999999999999999998653     45889999999999999999999   99999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCC-CCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC-NEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~-~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+..+|++|||++........  .....+++.|+|||.+.+..+ +.++|+||+|+++ |+|++|+.||.+.+.
T Consensus       151 ~~~~vkL~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil-~elltG~~Pf~~~~~  221 (476)
T 2y94_A          151 AHMNAKIADFGLSNMMSDGEF--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVIL-YALLCGTLPFDDDHV  221 (476)
T ss_dssp             TTCCEEECCCSSCEECCTTCC--BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHH-HHHHHSSCSSCCSSS
T ss_pred             cCCCeEEEeccchhhcccccc--ccccCCCcCeEChhhccCCCCCCCcceehhhHHHH-HHHhhCCCCCCCCCH
Confidence            999999999999876644322  223468899999999988765 6899999999999 999999999987654

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.96  E-value=8.4e-31  Score=187.45  Aligned_cols=143  Identities=20%  Similarity=0.279  Sum_probs=121.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++||||++ ++|.+.+....    ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        82 v~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~  153 (311)
T 3niz_A           82 VSLIDVIHSERCLTLVFEFME-KDLKKVLDENK----TGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLIN  153 (311)
T ss_dssp             CCEEEEECCSSCEEEEEECCS-EEHHHHHHTCT----TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEC
T ss_pred             eeeeeEEccCCEEEEEEcCCC-CCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEEC
Confidence            578999999999999999997 58888886543    45888999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+..+|++|||++......... .....++..|+|||.+.+ ..++.++|+||+|+++ |+|++|+.||.+.+.
T Consensus       154 ~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il-~~ll~g~~pf~~~~~  225 (311)
T 3niz_A          154 SDGALKLADFGLARAFGIPVRS-YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIF-AEMITGKPLFPGVTD  225 (311)
T ss_dssp             TTCCEEECCCTTCEETTSCCC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHH-HHHHHSSCSCCCSST
T ss_pred             CCCCEEEccCcCceecCCCccc-ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHH-HHHHhCCCCCCCCCh
Confidence            9999999999998765432221 223457889999999876 5689999999999999 999999999987544

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.96  E-value=2.2e-31  Score=191.29  Aligned_cols=142  Identities=23%  Similarity=0.311  Sum_probs=119.1

Q ss_pred             CeEEEEEecCCC----ceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCC----------C
Q 031436            1 MRLIGCCLETEN----PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR----------P   66 (159)
Q Consensus         1 v~l~~~~~~~~~----~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~----------~   66 (159)
                      |++++++.++..    +++||||+++|+|.+++..      ..+++..+..++.|++.|+.|||   +.          +
T Consensus        81 v~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~  151 (322)
T 3soc_A           81 LQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA------NVVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPA  151 (322)
T ss_dssp             CCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECE
T ss_pred             hhhcceeccCCCCCceEEEEEecCCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCC
Confidence            578899887544    6999999999999999965      34788999999999999999999   88          9


Q ss_pred             eEEecCCCCCEEecCCCceEEEecCCCcccCCCcce-eeeeecccccccCccccccC-----CCCCCcceEeccccccCc
Q 031436           67 IVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR-IRGRVMGTFGYLPPEYIATG-----DCNEKCDVYSFDGSRDSG  140 (159)
Q Consensus        67 ~~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~-----~~~~~~DvwS~g~~~~~~  140 (159)
                      ++||||||+||+++.+..+|++|||++......... ......++..|+|||.+.+.     .++.++|+||||+++ |+
T Consensus       152 ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il-~e  230 (322)
T 3soc_A          152 ISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVL-WE  230 (322)
T ss_dssp             EECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHH-HH
T ss_pred             EEeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHH-HH
Confidence            999999999999999999999999998765433221 12224578999999998763     456688999999999 99


Q ss_pred             ceecccccccCC
Q 031436          141 HLTGRAWYRSED  152 (159)
Q Consensus       141 ~~~g~~p~~~~~  152 (159)
                      |++|+.||.+..
T Consensus       231 l~tg~~pf~~~~  242 (322)
T 3soc_A          231 LASRCTAADGPV  242 (322)
T ss_dssp             HHTTBTTSSSCC
T ss_pred             HHhCCCCCCCCc
Confidence            999999998754

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.96  E-value=1.2e-31  Score=191.68  Aligned_cols=143  Identities=24%  Similarity=0.409  Sum_probs=115.4

Q ss_pred             CeEEEEEecCCCc----eEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCC
Q 031436            1 MRLIGCCLETENP----VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSN   76 (159)
Q Consensus         1 v~l~~~~~~~~~~----~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~n   76 (159)
                      |++++++......    ++||||+++++|.+.+...     ..+++..+..++.|++.++.|||   +++++|+||+|+|
T Consensus        75 v~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~N  146 (311)
T 3ork_A           75 VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPAN  146 (311)
T ss_dssp             CCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGG
T ss_pred             ceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHH
Confidence            5678888765544    9999999999999998754     45788999999999999999999   8999999999999


Q ss_pred             EEecCCCceEEEecCCCcccCCCcc--eeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           77 ILFQEQSVAKLFDFSYSESIPEGET--RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        77 il~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      |+++.+..+|++|||++........  .......++..|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       147 il~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l-~~ll~g~~pf~~~~  223 (311)
T 3ork_A          147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL-YEVLTGEPPFTGDS  223 (311)
T ss_dssp             EEEETTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHH-HHHHHSSCSCCCSS
T ss_pred             EEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHH-HHHHhCCCCCCCCC
Confidence            9999999999999999876543321  112234578999999999999999999999999999 99999999998764

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.96  E-value=3.9e-31  Score=193.53  Aligned_cols=144  Identities=23%  Similarity=0.299  Sum_probs=113.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++++|.+++..++||||+++|+|.+++....    ..+++..+..++.|++.|+.|||   +++++||||||.||+++
T Consensus       109 v~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~  181 (373)
T 2qol_A          109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILIN  181 (373)
T ss_dssp             CCEEEEECSSSSCEEEEECCTTCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEC
T ss_pred             CeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEc
Confidence            578999999999999999999999999997542    45888899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCccee--eeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRI--RGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..+|++|||++..........  .....++..|+|||.+.+..++.++|+||||+++ |++++ |+.||...+
T Consensus       182 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il-~ellt~g~~P~~~~~  255 (373)
T 2qol_A          182 SNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL-WEVMSYGERPYWEMS  255 (373)
T ss_dssp             TTCCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTC-CTTTTCC
T ss_pred             CCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHH-HHHHhCCCCCCCCCC
Confidence            99999999999987654332111  1112345679999999999999999999999999 99887 999997654

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.96  E-value=3.8e-31  Score=192.11  Aligned_cols=150  Identities=22%  Similarity=0.378  Sum_probs=123.8

Q ss_pred             CeEEEEEecCC-CceEEEEecCCCChHHHhhCCCCC--------------------------------------------
Q 031436            1 MRLIGCCLETE-NPVLVFEYVEYGTLADRIYHPRQP--------------------------------------------   35 (159)
Q Consensus         1 v~l~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~--------------------------------------------   35 (159)
                      |+++++|.+.+ ..+++|||+++|+|.+.+......                                            
T Consensus        89 v~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (359)
T 3vhe_A           89 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFV  168 (359)
T ss_dssp             CCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------
T ss_pred             eeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccc
Confidence            57899988755 489999999999999998764320                                            


Q ss_pred             -----------------CCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecCCCcccCC
Q 031436           36 -----------------NFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPE   98 (159)
Q Consensus        36 -----------------~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~   98 (159)
                                       ....+++..+..++.|++.|+.|||   +++++|+||||.||+++.+..+|++|||++.....
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~  245 (359)
T 3vhe_A          169 EEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK  245 (359)
T ss_dssp             ---------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTS
T ss_pred             cccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecc
Confidence                             0122788889999999999999999   89999999999999999999999999999876544


Q ss_pred             Ccc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCCc
Q 031436           99 GET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDWK  154 (159)
Q Consensus        99 ~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~~  154 (159)
                      ... .......++..|+|||.+.+..++.++|+||||+++ |+|++ |+.||.+.+..
T Consensus       246 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il-~ellt~g~~p~~~~~~~  302 (359)
T 3vhe_A          246 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL-WEIFSLGASPYPGVKID  302 (359)
T ss_dssp             CTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHH-HHHTTTSCCSSTTCCCS
T ss_pred             cccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHH-HHHHhcCCCCCCccchh
Confidence            322 222344567889999999999999999999999999 99998 99999886543

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.96  E-value=1.2e-31  Score=200.50  Aligned_cols=144  Identities=28%  Similarity=0.337  Sum_probs=116.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+ +..++||||+++|+|.+++.....   ..++...+..++.|++.|+.|||   +++++||||+|+||+++
T Consensus       242 v~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~  314 (452)
T 1fmk_A          242 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVG  314 (452)
T ss_dssp             CCEEEEECS-SSCEEEECCCTTCBHHHHHSHHHH---TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEC
T ss_pred             eeEEEEEcC-CceEEEehhhcCCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEC
Confidence            578898876 778999999999999999864321   34788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..+|++|||++...............++..|+|||.+.+..++.++|+||||+++ |+|++ |+.||.+.+
T Consensus       315 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l-~el~t~g~~P~~~~~  386 (452)
T 1fmk_A          315 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL-TELTTKGRVPYPGMV  386 (452)
T ss_dssp             GGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTTCCSSTTCC
T ss_pred             CCCCEEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHH-HHHHhCCCCCCCCCC
Confidence            999999999999876543322222223456789999999988999999999999999 99999 999998754

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=8.4e-31  Score=189.42  Aligned_cols=149  Identities=25%  Similarity=0.394  Sum_probs=124.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCC------------------CCCccchhhHHHHHHHHHHHHHHhhhc
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQP------------------NFEPVTCSLRLKIAMEIAYGIAYLHVA   62 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~------------------~~~~~~~~~~~~~~~~i~~~l~~lh~~   62 (159)
                      |++++++.+++..+++|||+++|+|.+.+......                  ....+++..+..++.|++.|+.|||  
T Consensus       112 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH--  189 (344)
T 1rjb_A          112 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE--  189 (344)
T ss_dssp             CCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH--
T ss_pred             eeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH--
Confidence            57899999999999999999999999999764321                  0134788889999999999999999  


Q ss_pred             CCCCeEEecCCCCCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCcc
Q 031436           63 FSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGH  141 (159)
Q Consensus        63 ~~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~  141 (159)
                       +.+++|+||+|+||+++.+..++++|||++........ .......++..|+|||.+.+..++.++|+||||+++ |+|
T Consensus       190 -~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il-~el  267 (344)
T 1rjb_A          190 -FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILL-WEI  267 (344)
T ss_dssp             -HTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH-HHH
T ss_pred             -hCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHH-HHH
Confidence             89999999999999999999999999999876543322 122334467789999999988999999999999999 999


Q ss_pred             ee-cccccccCCC
Q 031436          142 LT-GRAWYRSEDW  153 (159)
Q Consensus       142 ~~-g~~p~~~~~~  153 (159)
                      ++ |..||.+.+.
T Consensus       268 ~t~g~~p~~~~~~  280 (344)
T 1rjb_A          268 FSLGVNPYPGIPV  280 (344)
T ss_dssp             TTTSCCSSTTCCC
T ss_pred             HcCCCCCcccCCc
Confidence            98 9999987654

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.96  E-value=5.4e-31  Score=189.57  Aligned_cols=144  Identities=26%  Similarity=0.328  Sum_probs=121.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..++||||+++|+|.+.+.....   ..+++..+..++.|++.|+.|||   +++++|+||+|+||+++
T Consensus        92 v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~  165 (327)
T 3lm5_A           92 INLHEVYENTSEIILILEYAAGGEIFSLCLPELA---EMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLS  165 (327)
T ss_dssp             CCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEES
T ss_pred             EEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEe
Confidence            5789999999999999999999999998865322   56889999999999999999999   89999999999999998


Q ss_pred             C---CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 E---QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~---~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .   +..+|++|||++........  .....+++.|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+.
T Consensus       166 ~~~~~~~~kL~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~~ll~g~~pf~~~~~  238 (327)
T 3lm5_A          166 SIYPLGDIKIVDFGMSRKIGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIA-YMLLTHTSPFVGEDN  238 (327)
T ss_dssp             CBTTBCCEEECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHH-HHHHHSSCSSCCSSH
T ss_pred             cCCCCCcEEEeeCccccccCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHH-HHHHhCCCCCCCCCc
Confidence            7   67899999999876643322  1234578899999999999999999999999999 999999999977643

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.96  E-value=2e-31  Score=193.08  Aligned_cols=141  Identities=21%  Similarity=0.359  Sum_probs=120.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||++.
T Consensus        79 v~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~  150 (342)
T 2qr7_A           79 ITLKDVYDDGKYVYVVTELMKGGELLDKILRQ-----KFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYV  150 (342)
T ss_dssp             CCEEEEEECSSEEEEEECCCCSCBHHHHHHTC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEES
T ss_pred             CeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEe
Confidence            57899999999999999999999999988754     45889999999999999999999   89999999999999985


Q ss_pred             CC----CceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           81 EQ----SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~~----~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      ..    ..+|++|||++........ ......++..|+|||.+.+..++.++|+||+|+++ |+|++|..||.+.
T Consensus       151 ~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~ell~g~~Pf~~~  223 (342)
T 2qr7_A          151 DESGNPESIRICDFGFAKQLRAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLL-YTMLTGYTPFANG  223 (342)
T ss_dssp             SSSCSGGGEEECCCTTCEECBCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHSSCSSCSS
T ss_pred             cCCCCcCeEEEEECCCcccCcCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHH-HHHhcCCCCCCCC
Confidence            43    2599999999876543322 12234678899999999888889999999999999 9999999999764

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.96  E-value=2e-31  Score=187.96  Aligned_cols=144  Identities=21%  Similarity=0.346  Sum_probs=123.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..+++|||+++++|.+.+....    ..+++..+..++.|++.++.+||   +++++|+||+|.||+++
T Consensus        82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~  154 (283)
T 3gen_A           82 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMR----HRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVN  154 (283)
T ss_dssp             CCEEEEECSSSSEEEEECCCTTCBHHHHHHCGG----GCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEEC
T ss_pred             eeEEEEEecCCCeEEEEeccCCCcHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEc
Confidence            578999999999999999999999999987632    45888999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..++++|||.+...............++..|+|||.+.+..++.++|+||+|+++ |++++ |+.||...+
T Consensus       155 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l-~~l~t~g~~p~~~~~  226 (283)
T 3gen_A          155 DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM-WEIYSLGKMPYERFT  226 (283)
T ss_dssp             TTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHH-HHHHTTTCCTTTTSC
T ss_pred             CCCCEEEccccccccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHH-HHHHhCCCCCccccC
Confidence            999999999998876543322212223356679999999988999999999999999 99998 999997654

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.96  E-value=2.8e-31  Score=187.22  Aligned_cols=144  Identities=19%  Similarity=0.269  Sum_probs=111.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++. ++..+++|||+++++|.+.+....    ..+++..+..++.|++.|+.|||   +++++|+||+|+||+++
T Consensus        79 v~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~  150 (281)
T 1mp8_A           79 VKLIGVIT-ENPVWIIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVS  150 (281)
T ss_dssp             CCEEEEEC-SSSCEEEEECCTTEEHHHHHHHTT----TTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEE
T ss_pred             ceEEEEEc-cCccEEEEecCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEEC
Confidence            56788874 567899999999999999987542    35788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~  153 (159)
                      .+..+|++|||++...............++..|+|||.+.+..++.++|+||+|+++ |++++ |..||.+.+.
T Consensus       151 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~ell~~g~~pf~~~~~  223 (281)
T 1mp8_A          151 SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM-WEILMHGVKPFQGVKN  223 (281)
T ss_dssp             ETTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHH-HHHHTTSCCTTTTCCG
T ss_pred             CCCCEEECccccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHH-HHHHhcCCCCCCcCCH
Confidence            999999999999876644332222233456789999999988999999999999999 99886 9999987543

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.96  E-value=6.7e-31  Score=195.44  Aligned_cols=141  Identities=23%  Similarity=0.241  Sum_probs=122.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++.+...+..+++|||+. ++|.+.+.....   ..+++..+..++.|++.|+.|||   +.+++||||||+||+++
T Consensus       162 v~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~  234 (429)
T 3kvw_A          162 IHMLENFTFRNHICMTFELLS-MNLYELIKKNKF---QGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLK  234 (429)
T ss_dssp             CCEEEEEEETTEEEEEECCCC-CBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEES
T ss_pred             EEEEeecccCCeEEEEEeccC-CCHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEc
Confidence            568899999999999999995 699998876532   45888999999999999999999   88999999999999999


Q ss_pred             CCCc--eEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSV--AKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~--~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+..  +||+|||++.......    ....++..|+|||.+.+..++.++|+|||||++ |+|++|+.||.+.+.
T Consensus       235 ~~~~~~vkL~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il-~elltG~~pf~~~~~  304 (429)
T 3kvw_A          235 QQGRSGIKVIDFGSSCYEHQRV----YTYIQSRFYRAPEVILGARYGMPIDMWSLGCIL-AELLTGYPLLPGEDE  304 (429)
T ss_dssp             STTSCCEEECCCTTCEETTCCC----CSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHH-HHHHHSSCSSCCSSH
T ss_pred             cCCCcceEEeecccceecCCcc----cccCCCCCccChHHHhCCCCCchHHHHhHHHHH-HHHHhCCCCCCCCCH
Confidence            8876  9999999986543322    234678899999999999999999999999999 999999999988653

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.96  E-value=1.4e-30  Score=186.70  Aligned_cols=146  Identities=19%  Similarity=0.309  Sum_probs=121.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCC-CCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-QPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~   79 (159)
                      |++++++.+++..++||||++ |+|.+.+.... ......+++..+..++.|++.|+.|||   +++++||||||+||++
T Consensus        66 v~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~  141 (317)
T 2pmi_A           66 VRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLI  141 (317)
T ss_dssp             CCEEEEECCTTEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEE
T ss_pred             ceEEEEEEECCeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEE
Confidence            578999999999999999997 69998876431 122245788889999999999999999   8999999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCC
Q 031436           80 QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +.++.+|++|||++......... .....++..|+|||.+.+. .++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       142 ~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il-~el~~g~~pf~~~~  213 (317)
T 2pmi_A          142 NKRGQLKLGDFGLARAFGIPVNT-FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCIL-AEMITGKPLFPGTN  213 (317)
T ss_dssp             CTTCCEEECCCSSCEETTSCCCC-CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHH-HHHHHSSCSCCCSS
T ss_pred             cCCCCEEECcCccceecCCCccc-CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHH-HHHHhCCCCCCCCC
Confidence            99999999999998765432221 1233578899999998764 689999999999999 99999999997754

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.96  E-value=3.4e-31  Score=187.11  Aligned_cols=147  Identities=22%  Similarity=0.354  Sum_probs=126.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..+++|||+++++|.+.+.....   ..+++..+..++.|++.++.+||   +.+++|+||+|+||+++
T Consensus        72 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~  145 (288)
T 3kfa_A           72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR---QEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVG  145 (288)
T ss_dssp             CCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCT---TTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEEC
T ss_pred             eeEEEEEccCCCEEEEEEcCCCCcHHHHHHhccc---CCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEc
Confidence            5789999999999999999999999999976432   45888899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCCc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDWK  154 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~~  154 (159)
                      .+..++++|||.+...............++..|+|||.+.+..++.++|+||+|+++ |+|++ |..||.+.+..
T Consensus       146 ~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~ll~~g~~p~~~~~~~  219 (288)
T 3kfa_A          146 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL-WEIATYGMSPYPGIDLS  219 (288)
T ss_dssp             GGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTSCCSSTTCCGG
T ss_pred             CCCCEEEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHH-HHHHhCCCCCCCCCCHH
Confidence            999999999999876654433333334456789999999988999999999999999 99999 99999876543

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.96  E-value=3.8e-31  Score=192.85  Aligned_cols=141  Identities=24%  Similarity=0.346  Sum_probs=112.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||.||+++
T Consensus        79 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~  150 (361)
T 3uc3_A           79 VRFKEVILTPTHLAIIMEYASGGELYERICNA-----GRFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLD  150 (361)
T ss_dssp             CCEEEEEECSSEEEEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEEC
T ss_pred             CcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEc
Confidence            57899999999999999999999999988654     45889999999999999999999   89999999999999998


Q ss_pred             CCCc--eEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCC-cceEeccccccCcceecccccccCC
Q 031436           81 EQSV--AKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEK-CDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~--~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~-~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..  +|++|||++.......  ......+++.|+|||.+.+..++.+ +|+||+|+++ |+|++|+.||.+.+
T Consensus       151 ~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il-~ell~g~~Pf~~~~  222 (361)
T 3uc3_A          151 GSPAPRLKICDFGYSKSSVLHS--QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTL-YVMLVGAYPFEDPE  222 (361)
T ss_dssp             SSSSCCEEECCCCCC-----------------CTTSCHHHHHCSSCCHHHHHHHHHHHHH-HHHHHSSCSCC---
T ss_pred             CCCCceEEEeecCccccccccC--CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHH-HHHHhCCCCCCCCc
Confidence            7654  9999999886433222  1223468899999999988887655 8999999999 99999999998754

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.96  E-value=1.4e-30  Score=186.71  Aligned_cols=144  Identities=27%  Similarity=0.352  Sum_probs=120.0

Q ss_pred             CeEEEEEecCC--CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLETE--NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      |++++++...+  ..++||||+++++|.+.+.....  ...+++..+..++.|++.|+.|||   +++++|+||||+||+
T Consensus        70 v~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIl  144 (319)
T 4euu_A           70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIM  144 (319)
T ss_dssp             CCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGG--TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEE
T ss_pred             ceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEE
Confidence            57888887655  67999999999999999976432  133889999999999999999999   899999999999999


Q ss_pred             e----cCCCceEEEecCCCcccCCCcceeeeeecccccccCccccc--------cCCCCCCcceEeccccccCcceeccc
Q 031436           79 F----QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA--------TGDCNEKCDVYSFDGSRDSGHLTGRA  146 (159)
Q Consensus        79 ~----~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~--------~~~~~~~~DvwS~g~~~~~~~~~g~~  146 (159)
                      +    +.+..+|++|||++.........  ....++..|+|||.+.        +..++.++|+||||+++ |+|++|+.
T Consensus       145 l~~~~~~~~~~kL~Dfg~a~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il-~el~~g~~  221 (319)
T 4euu_A          145 RVIGEDGQSVYKLTDFGAARELEDDEQF--VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTF-YHAATGSL  221 (319)
T ss_dssp             EEECTTSCEEEEECCCTTCEECCTTCCB--CCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHH-HHHHHSSC
T ss_pred             EeccCCCCceEEEccCCCceecCCCCce--eecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHH-HHHHhCCC
Confidence            8    66677999999998766443321  2345788999999886        46789999999999999 99999999


Q ss_pred             ccccCC
Q 031436          147 WYRSED  152 (159)
Q Consensus       147 p~~~~~  152 (159)
                      ||...+
T Consensus       222 pf~~~~  227 (319)
T 4euu_A          222 PFRPFE  227 (319)
T ss_dssp             SEECTT
T ss_pred             CCCCCC
Confidence            997543

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.96  E-value=1.4e-30  Score=186.82  Aligned_cols=141  Identities=23%  Similarity=0.369  Sum_probs=123.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..+++|||+++++|.+.+...     ..+++..+..++.|++.|+.|||   +.+++|+||+|+||+++
T Consensus        78 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~  149 (321)
T 2a2a_A           78 ITLHDVYENRTDVVLILELVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLL  149 (321)
T ss_dssp             CCEEEEEECSSEEEEEECCCCSCBHHHHHHTC-----SCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEES
T ss_pred             ceEEEEEecCCEEEEEEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEe
Confidence            57889999999999999999999999998753     46889999999999999999999   89999999999999998


Q ss_pred             CCC----ceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQS----VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~----~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+.    .++++|||++.........  ....++..|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       150 ~~~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~g~~pf~~~~  222 (321)
T 2a2a_A          150 DKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT-YILLSGASPFLGDT  222 (321)
T ss_dssp             CTTSSSCCEEECCCTTCEECCTTCCC--CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHH-HHHHHSCCSSCCSS
T ss_pred             cCCCCcCCEEEccCccceecCccccc--cccCCCCCccCcccccCCCCCCccccHHHHHHH-HHHHHCCCCCCCCC
Confidence            776    7999999998766443221  234578899999999988999999999999999 99999999997754

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.96  E-value=1.5e-30  Score=183.12  Aligned_cols=145  Identities=22%  Similarity=0.328  Sum_probs=105.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..++++||+++++|.+.+....    ..+++..+..++.|++.|+.|||   +.+++|+||+|.||+++
T Consensus        74 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~  146 (278)
T 3cok_A           74 LELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV----KPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLT  146 (278)
T ss_dssp             CCEEEEEECSSEEEEEEECCTTEEHHHHHHTCS----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEEC
T ss_pred             EeEEEEEccCCeEEEEEecCCCCcHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEc
Confidence            578899999999999999999999999987542    46888999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCCc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWK  154 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~  154 (159)
                      .+..++++|||.+......... .....++..|+|||.+.+..++.++|+||+|+++ ++|++|+.||...+..
T Consensus       147 ~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~g~~p~~~~~~~  218 (278)
T 3cok_A          147 RNMNIKIADFGLATQLKMPHEK-HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMF-YTLLIGRPPFDTDTVK  218 (278)
T ss_dssp             TTCCEEECCCTTCEECC-----------------------------CTHHHHHHHHH-HHHHHSSCSSCCCSCC
T ss_pred             CCCCEEEEeecceeeccCCCCc-ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHH-HHHHhCCCCCCChhHH
Confidence            9999999999988765432221 1234578889999999988899999999999999 9999999999876543

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.96  E-value=1.1e-30  Score=186.83  Aligned_cols=136  Identities=20%  Similarity=0.159  Sum_probs=115.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++++|.+++..++||||+ +++|.+.+...+    ..+++..+..++.|++.|+.|||   +.+++|+||||+||+++
T Consensus       120 v~l~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~  191 (311)
T 3p1a_A          120 VRLEQAWEEGGILYLQTELC-GPSLQQHCEAWG----ASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLG  191 (311)
T ss_dssp             CCEEEEEEETTEEEEEEECC-CCBHHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEC
T ss_pred             EEEEEEEEeCCEEEEEEecc-CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEC
Confidence            57899999999999999999 679999886543    45889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceeccccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWY  148 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~  148 (159)
                      .+..+|++|||++........  .....++..|+|||.+.+ .++.++|+||||+++ ++|++|..|+
T Consensus       192 ~~~~~kl~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il-~el~~g~~~~  255 (311)
T 3p1a_A          192 PRGRCKLGDFGLLVELGTAGA--GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTI-LEVACNMELP  255 (311)
T ss_dssp             GGGCEEECCCTTCEECC--------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHH-HHHHHTCCCC
T ss_pred             CCCCEEEccceeeeecccCCC--CcccCCCccccCHhHhcC-CCCchhhHHHHHHHH-HHHHhCCCCC
Confidence            999999999999876543222  223457889999999876 789999999999999 9999996544

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.96  E-value=6.6e-31  Score=187.76  Aligned_cols=143  Identities=20%  Similarity=0.304  Sum_probs=113.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..++++||+++++|.+.+...     ..+++..+..++.|++.++.|||   +.+++|+||+|.||+++
T Consensus        97 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~  168 (309)
T 2h34_A           97 VPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQ-----GPLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVS  168 (309)
T ss_dssp             CCEEEEEEETTEEEEEEECCCCEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEC
T ss_pred             eEEEEEEeeCCeEEEEEEecCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEc
Confidence            57889999999999999999999999998754     35788999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||++...............++..|+|||.+.+..++.++|+||||+++ |++++|+.||.+.+
T Consensus       169 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~g~~pf~~~~  239 (309)
T 2h34_A          169 ADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVL-YECLTGSPPYQGDQ  239 (309)
T ss_dssp             TTSCEEECSCCC----------------CCGGGCCGGGTCC----CCCHHHHHHHHH-HHHHHSSCSSCSCH
T ss_pred             CCCCEEEecCccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHH-HHHHHCCCCCCCch
Confidence            999999999998876544322222334578889999999988899999999999999 99999999997654

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.96  E-value=1.1e-30  Score=186.37  Aligned_cols=150  Identities=24%  Similarity=0.337  Sum_probs=125.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCC-------------------CCCccchhhHHHHHHHHHHHHHHhhh
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQP-------------------NFEPVTCSLRLKIAMEIAYGIAYLHV   61 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-------------------~~~~~~~~~~~~~~~~i~~~l~~lh~   61 (159)
                      |++++++.+++..+++|||+++++|.+++......                   ....+++..+..++.|++.|+.||| 
T Consensus        89 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH-  167 (314)
T 2ivs_A           89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA-  167 (314)
T ss_dssp             CCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH-
T ss_pred             eeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH-
Confidence            57899999999999999999999999998754321                   1134788899999999999999999 


Q ss_pred             cCCCCeEEecCCCCCEEecCCCceEEEecCCCcccCCCcce-eeeeecccccccCccccccCCCCCCcceEeccccccCc
Q 031436           62 AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR-IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSG  140 (159)
Q Consensus        62 ~~~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~  140 (159)
                        +++++|+||+|.||+++.+..++++|||++......... ......++..|+|||.+.+..++.++|+||+|+++ |+
T Consensus       168 --~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~e  244 (314)
T 2ivs_A          168 --EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL-WE  244 (314)
T ss_dssp             --HTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHH-HH
T ss_pred             --HCCCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHH-HH
Confidence              899999999999999999999999999998765443221 12233456789999999988899999999999999 99


Q ss_pred             cee-cccccccCCCc
Q 031436          141 HLT-GRAWYRSEDWK  154 (159)
Q Consensus       141 ~~~-g~~p~~~~~~~  154 (159)
                      |++ |..||.+.+.+
T Consensus       245 l~t~g~~p~~~~~~~  259 (314)
T 2ivs_A          245 IVTLGGNPYPGIPPE  259 (314)
T ss_dssp             HHTTSCCSSTTCCGG
T ss_pred             HHhCCCCCCCCCCHH
Confidence            999 99999876543

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.96  E-value=1.1e-30  Score=201.66  Aligned_cols=144  Identities=26%  Similarity=0.412  Sum_probs=119.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++++|.. +..++||||+++|+|.+++...+    ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus       399 v~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~----~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~  470 (613)
T 2ozo_A          399 VRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLV  470 (613)
T ss_dssp             CCEEEEEES-SSEEEEEECCTTCBHHHHHTTCT----TTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEE
T ss_pred             eeEEEEecc-CCeEEEEEeCCCCcHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEc
Confidence            678999876 67899999999999999986532    46889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcce--eeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~  153 (159)
                      .+..+||+|||++.........  ......++..|+|||.+.+..++.++||||||+++ |+|++ |+.||.+.+.
T Consensus       471 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l-~ellt~G~~Pf~~~~~  545 (613)
T 2ozo_A          471 NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTM-WEALSYGQKPYKKMKG  545 (613)
T ss_dssp             ETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTSCCTTTTCCS
T ss_pred             CCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHH-HHHHHCCCCCCCCCCH
Confidence            9999999999998866433221  11222345789999999989999999999999999 99998 9999987654

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.96  E-value=2.8e-30  Score=185.80  Aligned_cols=141  Identities=23%  Similarity=0.300  Sum_probs=121.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..+++|||+ +++|.+.+.....   .+++...+..++.|++.|+.|||   +++++|+||+|+||+++
T Consensus        80 ~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~  152 (339)
T 1z57_A           80 VQMLEWFEHHGHICIVFELL-GLSTYDFIKENGF---LPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFV  152 (339)
T ss_dssp             CCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEES
T ss_pred             EeeecccccCCcEEEEEcCC-CCCHHHHHHhcCC---CCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEe
Confidence            46788999999999999999 7899998876432   45788899999999999999999   89999999999999998


Q ss_pred             C-------------------CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcc
Q 031436           81 E-------------------QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGH  141 (159)
Q Consensus        81 ~-------------------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~  141 (159)
                      .                   +..+|++|||++.......    ....++..|+|||.+.+..++.++|+||+|+++ |++
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il-~el  227 (339)
T 1z57_A          153 QSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHH----STLVSTRHYRAPEVILALGWSQPCDVWSIGCIL-IEY  227 (339)
T ss_dssp             CCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSCC----CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHH-HHH
T ss_pred             ccccccccCCccccccccccCCCceEeeCcccccCcccc----ccccCCccccChHHhhCCCCCcchhhHHHHHHH-HHH
Confidence            7                   5579999999887543322    234578899999999998999999999999999 999


Q ss_pred             eecccccccCCC
Q 031436          142 LTGRAWYRSEDW  153 (159)
Q Consensus       142 ~~g~~p~~~~~~  153 (159)
                      ++|+.||.+.+.
T Consensus       228 ~~g~~pf~~~~~  239 (339)
T 1z57_A          228 YLGFTVFPTHDS  239 (339)
T ss_dssp             HHSSCSCCCSCH
T ss_pred             HhCCCCCCCCCh
Confidence            999999987653

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.96  E-value=1.7e-30  Score=182.96  Aligned_cols=141  Identities=27%  Similarity=0.482  Sum_probs=121.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..+++|||+++++|.+.+...     ..++...+..++.|++.++.|||   +.+++|+||+|.||+++
T Consensus        72 ~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~  143 (279)
T 3fdn_A           72 LRLYGYFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLG  143 (279)
T ss_dssp             CCEEEEEECSSEEEEEECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEEC
T ss_pred             cchhheEecCCEEEEEEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEc
Confidence            57899999999999999999999999988654     45788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.++++|||++.......   .....++..|+|||.+.+..++.++|+||+|+++ ++|++|+.||...+.
T Consensus       144 ~~~~~~l~Dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~g~~p~~~~~~  212 (279)
T 3fdn_A          144 SAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLC-YEFLVGKPPFEANTY  212 (279)
T ss_dssp             TTSCEEECSCCEESCC-----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHH-HHHHHSSCTTCCSSH
T ss_pred             CCCCEEEEeccccccCCccc---ccccCCCCCccCHhHhccCCCCccchhHhHHHHH-HHHHHCCCCCCCCcH
Confidence            99999999999875543322   1234578899999999999999999999999999 999999999987654

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.96  E-value=6.1e-31  Score=189.29  Aligned_cols=144  Identities=22%  Similarity=0.355  Sum_probs=120.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++++|.++ ..++++|++.+|+|.+.+...+    ..+++..+..++.|++.|+.|||   +++++||||||.||+++
T Consensus        80 v~~~~~~~~~-~~~~v~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~  151 (327)
T 3poz_A           80 CRLLGICLTS-TVQLITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVK  151 (327)
T ss_dssp             CCEEEEEESS-SEEEEEECCTTCBHHHHHHHST----TSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEE
T ss_pred             eEEEEEEecC-CeEEEEEecCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEEC
Confidence            5788999874 5789999999999999987643    45888899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcce-eeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETR-IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~  153 (159)
                      .+..+|++|||++......... ......++..|+|||.+.+..++.++|+||||+++ |++++ |+.||.+.+.
T Consensus       152 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il-~ellt~g~~p~~~~~~  225 (327)
T 3poz_A          152 TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV-WELMTFGSKPYDGIPA  225 (327)
T ss_dssp             ETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTSCCTTTTCCG
T ss_pred             CCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHH-HHHHhcCCCCccCCCH
Confidence            9999999999998765433221 12223456789999999999999999999999999 99999 9999987543

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.96  E-value=3.7e-31  Score=191.66  Aligned_cols=140  Identities=16%  Similarity=0.148  Sum_probs=119.2

Q ss_pred             CeEEEEEec----CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCC
Q 031436            1 MRLIGCCLE----TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSN   76 (159)
Q Consensus         1 v~l~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~n   76 (159)
                      +++++++..    +...+++|||+ +++|.+.+...     ..+++..+..++.|++.|+.|||   +.+++||||||+|
T Consensus       111 ~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~N  181 (345)
T 2v62_A          111 PLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQN-----GTFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAAN  181 (345)
T ss_dssp             CCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGG-----GBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGG
T ss_pred             ceeecccccccCCCcEEEEEEecc-CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHH
Confidence            467888877    67889999999 89999988654     36889999999999999999999   8999999999999


Q ss_pred             EEecCCC--ceEEEecCCCcccCCCcc------eeeeeecccccccCccccccCCCCCCcceEeccccccCcceeccccc
Q 031436           77 ILFQEQS--VAKLFDFSYSESIPEGET------RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWY  148 (159)
Q Consensus        77 il~~~~~--~~~l~d~~~~~~~~~~~~------~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~  148 (159)
                      |+++.+.  .+|++|||++........      .......++..|+|||.+.+..++.++|+||||+++ |+|++|+.||
T Consensus       182 Ill~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il-~ell~g~~pf  260 (345)
T 2v62_A          182 LLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCM-LRWLCGKLPW  260 (345)
T ss_dssp             EEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHH-HHHHHSSCTT
T ss_pred             EEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHH-HHHHhCCCCc
Confidence            9998776  899999999876532211      011234578899999999998999999999999999 9999999999


Q ss_pred             cc
Q 031436          149 RS  150 (159)
Q Consensus       149 ~~  150 (159)
                      .+
T Consensus       261 ~~  262 (345)
T 2v62_A          261 EQ  262 (345)
T ss_dssp             GG
T ss_pred             cc
Confidence            65

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.96  E-value=2.4e-30  Score=183.22  Aligned_cols=141  Identities=21%  Similarity=0.244  Sum_probs=118.4

Q ss_pred             EEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe---c
Q 031436            4 IGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF---Q   80 (159)
Q Consensus         4 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~---~   80 (159)
                      ..++.+++..+++|||+ +++|.+.+....    ..+++..+..++.|++.|+.|||   +.+++|+||+|+||++   +
T Consensus        71 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~  142 (296)
T 4hgt_A           71 RWCGAEGDYNVMVMELL-GPSLEDLFNFCS----RKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGK  142 (296)
T ss_dssp             EEEEEETTEEEEEEECC-CCBHHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGG
T ss_pred             eeecCCCCceEEEEEcc-CCCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccC
Confidence            33446677789999999 899999987432    45889999999999999999999   8999999999999999   6


Q ss_pred             CCCceEEEecCCCcccCCCcc------eeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGET------RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~------~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+..+|++|||++........      .......++..|+|||.+.+..++.++|+||||+++ |++++|+.||.+.+.
T Consensus       143 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~g~~pf~~~~~  220 (296)
T 4hgt_A          143 KGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVL-MYFNLGSLPWQGLKA  220 (296)
T ss_dssp             GTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHH-HHHHHSSCTTSSCCC
T ss_pred             CCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHH-HHHhcCCCCCcccch
Confidence            788899999999876543322      111234678899999999999999999999999999 999999999987543

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.96  E-value=6.8e-31  Score=189.68  Aligned_cols=148  Identities=28%  Similarity=0.461  Sum_probs=122.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCC-------------------CCCccchhhHHHHHHHHHHHHHHhhh
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQP-------------------NFEPVTCSLRLKIAMEIAYGIAYLHV   61 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-------------------~~~~~~~~~~~~~~~~i~~~l~~lh~   61 (159)
                      |+++++|.+++..+++|||+++|+|.+++......                   ....+++..+..++.|++.|+.||| 
T Consensus       113 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH-  191 (343)
T 1luf_A          113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS-  191 (343)
T ss_dssp             CCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH-
T ss_pred             EEEEEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH-
Confidence            57899999999999999999999999998753211                   1246888999999999999999999 


Q ss_pred             cCCCCeEEecCCCCCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCc
Q 031436           62 AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSG  140 (159)
Q Consensus        62 ~~~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~  140 (159)
                        +++++|+||+|+||+++.+..+|++|||++........ .......++..|+|||.+.+..++.++|+||||+++ |+
T Consensus       192 --~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il-~e  268 (343)
T 1luf_A          192 --ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVL-WE  268 (343)
T ss_dssp             --HTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHH-HH
T ss_pred             --hCCeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHH-HH
Confidence              89999999999999999999999999998865532221 112234567889999999988999999999999999 99


Q ss_pred             cee-cccccccCC
Q 031436          141 HLT-GRAWYRSED  152 (159)
Q Consensus       141 ~~~-g~~p~~~~~  152 (159)
                      |++ |..||.+.+
T Consensus       269 l~t~g~~p~~~~~  281 (343)
T 1luf_A          269 IFSYGLQPYYGMA  281 (343)
T ss_dssp             HHTTTCCTTTTSC
T ss_pred             HHhcCCCcCCCCC
Confidence            998 999997754

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.96  E-value=2.3e-30  Score=187.03  Aligned_cols=140  Identities=19%  Similarity=0.234  Sum_probs=121.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCC-ChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe
Q 031436            1 MRLIGCCLETENPVLVFEYVEYG-TLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~   79 (159)
                      |++++++.+++..+++|||+.+| +|.+.+...     ..+++..+..++.|++.|+.|||   +++++|+||||.||++
T Consensus        92 v~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll  163 (335)
T 3dls_A           92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRH-----PRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVI  163 (335)
T ss_dssp             CCEEEEEECSSEEEEEEECCTTSCBHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred             eeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEE
Confidence            57899999999999999999766 999988754     45888999999999999999999   8999999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCC-CCCcceEeccccccCcceecccccccC
Q 031436           80 QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC-NEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~-~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      +.+..+|++|||++........  .....++..|+|||.+.+..+ +.++|+||+|+++ |+|++|+.||...
T Consensus       164 ~~~~~~kL~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il-~el~~g~~pf~~~  233 (335)
T 3dls_A          164 AEDFTIKLIDFGSAAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTL-YTLVFEENPFCEL  233 (335)
T ss_dssp             CTTSCEEECCCTTCEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHH-HHHHHSSCSCSSG
T ss_pred             cCCCcEEEeecccceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHH-HHHHhCCCchhhH
Confidence            9999999999999876644332  223468899999999988776 7889999999999 9999999999754

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.96  E-value=2e-30  Score=184.25  Aligned_cols=141  Identities=23%  Similarity=0.383  Sum_probs=118.4

Q ss_pred             CeEEEEEec--CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLE--TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      |++++++.+  ++..+++|||+++++|.+....      ..+++..+..++.|++.|+.|||   +++++|+||+|+||+
T Consensus        99 v~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil  169 (298)
T 2zv2_A           99 VKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL------KPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNLL  169 (298)
T ss_dssp             CCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS------SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEE
T ss_pred             CeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEE
Confidence            578888876  5578999999999999775432      46889999999999999999999   899999999999999


Q ss_pred             ecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCC---CCCCcceEeccccccCcceecccccccCC
Q 031436           79 FQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD---CNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        79 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~---~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ++.+..+|++|||++......... .....++..|+|||.+.+..   ++.++|+||+|+++ |+|++|+.||...+
T Consensus       170 ~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l-~~l~~g~~pf~~~~  244 (298)
T 2zv2_A          170 VGEDGHIKIADFGVSNEFKGSDAL-LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL-YCFVFGQCPFMDER  244 (298)
T ss_dssp             ECTTSCEEECCCTTCEECSSSSCE-ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             ECCCCCEEEecCCCcccccccccc-ccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHH-HHHHHCCCCCCCcc
Confidence            999999999999998766443222 22346789999999987655   36789999999999 99999999997654

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.96  E-value=2.3e-31  Score=194.40  Aligned_cols=149  Identities=26%  Similarity=0.340  Sum_probs=122.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCC--CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ--PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      |++++++.+++..++||||+++|+|.+++...+.  .....+++..+..++.|++.|+.|||   +++++||||||+||+
T Consensus       137 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIl  213 (367)
T 3l9p_A          137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCL  213 (367)
T ss_dssp             CCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEE
T ss_pred             CeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEE
Confidence            5789999999999999999999999999875432  12245788899999999999999999   899999999999999


Q ss_pred             ecCC---CceEEEecCCCcccCCCc-ceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCC
Q 031436           79 FQEQ---SVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDW  153 (159)
Q Consensus        79 ~~~~---~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~  153 (159)
                      ++.+   ..+|++|||++....... ........++..|+|||.+.+..++.++|+||||+++ |+|++ |..||.+.+.
T Consensus       214 l~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il-~ellt~g~~pf~~~~~  292 (367)
T 3l9p_A          214 LTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL-WEIFSLGYMPYPSKSN  292 (367)
T ss_dssp             ESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTSCCSSTTCCH
T ss_pred             EecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHH-HHHHhCCCCCCCCCCH
Confidence            9844   459999999876432111 1112234567889999999999999999999999999 99998 9999987643

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.96  E-value=2.9e-30  Score=181.53  Aligned_cols=140  Identities=25%  Similarity=0.354  Sum_probs=120.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe-
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF-   79 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~-   79 (159)
                      |++++++.+++..+++|||+++++|.+.+...     ..+++..+..++.|++.|+.+||   +++++|+||+|.||++ 
T Consensus        69 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~  140 (277)
T 3f3z_A           69 IRLYETFEDNTDIYLVMELCTGGELFERVVHK-----RVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFL  140 (277)
T ss_dssp             CCEEEEEECSSEEEEEEECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEES
T ss_pred             eeEEEEEecCCeEEEEEeccCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEe
Confidence            57899999999999999999999999988654     45788999999999999999999   8999999999999999 


Q ss_pred             --cCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           80 --QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        80 --~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                        +.+..++++|||++........  .....++..|+|||.+.+. ++.++|+||+|+++ ++|++|+.||.+.+
T Consensus       141 ~~~~~~~~~l~Dfg~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l-~~l~~g~~p~~~~~  211 (277)
T 3f3z_A          141 TDSPDSPLKLIDFGLAARFKPGKM--MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMM-YVLLCGYPPFSAPT  211 (277)
T ss_dssp             SSSTTCCEEECCCTTCEECCTTSC--BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             cCCCCCcEEEEecccceeccCccc--hhccCCCCCccChHHhccc-CCchhhehhHHHHH-HHHHHCCCCCCCCC
Confidence              6778899999998876543322  1234578899999998654 89999999999999 99999999998754

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.96  E-value=1.4e-30  Score=184.35  Aligned_cols=142  Identities=19%  Similarity=0.312  Sum_probs=118.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..+++|||+. ++|.+.+....    ..++...+..++.|++.|+.|||   +++++|+||||+||+++
T Consensus        63 v~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~  134 (288)
T 1ob3_A           63 VKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVCE----GGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLIN  134 (288)
T ss_dssp             CCEEEEEECSSCEEEEEECCS-EEHHHHHHTST----TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEC
T ss_pred             eeeeeEEccCCeEEEEEEecC-CCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEc
Confidence            578999999999999999997 59999887543    45788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+|++|||++......... .....++..|+|||.+.+. .++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       135 ~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il-~~l~~g~~pf~~~~  205 (288)
T 1ob3_A          135 REGELKIADFGLARAFGIPVRK-YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIF-AEMVNGTPLFPGVS  205 (288)
T ss_dssp             TTSCEEECCTTHHHHHCC----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHH-HHHHHSSCSCCCSS
T ss_pred             CCCCEEEeECccccccCccccc-cccccccccccCchheeCCCCCCcHHHHHHHHHHH-HHHHhCCCCCCCCC
Confidence            9999999999988765432221 1233578899999998764 589999999999999 99999999997653

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.96  E-value=2.2e-30  Score=186.18  Aligned_cols=142  Identities=21%  Similarity=0.328  Sum_probs=117.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++||||+. |+|.+.+....    ..++...+..++.|++.|+.|||   +.+++|+||+|.||+++
T Consensus        63 v~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~  134 (324)
T 3mtl_A           63 VTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCG----NIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLIN  134 (324)
T ss_dssp             CCEEEEEECSSCEEEEEECCS-EEHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEEC
T ss_pred             CeeeeEEeeCCEEEEEecccc-cCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEEC
Confidence            578999999999999999996 69998887543    45788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+|++|||++......... .....++..|+|||.+.+ ..++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       135 ~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il-~~l~~g~~pf~~~~  205 (324)
T 3mtl_A          135 ERGELKLADFGLARAKSIPTKT-YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIF-YEMATGRPLFPGST  205 (324)
T ss_dssp             TTCCEEECSSSEEECC-------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHH-HHHHHSSCSCCCSS
T ss_pred             CCCCEEEccCcccccccCCccc-cccccCcccccChhhhcCCCCCCcHHHHHHHHHHH-HHHHhCCCCCCCCC
Confidence            9999999999988655432221 123356889999999876 5689999999999999 99999999998754

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.96  E-value=1.6e-30  Score=185.47  Aligned_cols=149  Identities=21%  Similarity=0.360  Sum_probs=125.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCC-------------CCCccchhhHHHHHHHHHHHHHHhhhcCCCCe
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQP-------------NFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI   67 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-------------~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~   67 (159)
                      |++++++.+++..+++|||+++|+|.+.+......             ....+++..+..++.|++.|+.|||   +.++
T Consensus        90 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i  166 (313)
T 1t46_A           90 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNC  166 (313)
T ss_dssp             CCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTC
T ss_pred             eeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCe
Confidence            57899999999999999999999999998764321             1124788999999999999999999   8999


Q ss_pred             EEecCCCCCEEecCCCceEEEecCCCcccCCCcce-eeeeecccccccCccccccCCCCCCcceEeccccccCccee-cc
Q 031436           68 VFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR-IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GR  145 (159)
Q Consensus        68 ~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~  145 (159)
                      +|+||+|.||+++.+..+|++|||++......... ......++..|+|||.+.+..++.++|+||||+++ ++|++ |+
T Consensus       167 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~ellt~g~  245 (313)
T 1t46_A          167 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFL-WELFSLGS  245 (313)
T ss_dssp             CCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTTC
T ss_pred             ecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHH-HHHHhCCC
Confidence            99999999999999999999999988766543321 22233456789999999988999999999999999 99998 99


Q ss_pred             cccccCCC
Q 031436          146 AWYRSEDW  153 (159)
Q Consensus       146 ~p~~~~~~  153 (159)
                      .||.+.+.
T Consensus       246 ~p~~~~~~  253 (313)
T 1t46_A          246 SPYPGMPV  253 (313)
T ss_dssp             CSSTTCCS
T ss_pred             CCCCcccc
Confidence            99987654

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.96  E-value=5.7e-30  Score=187.78  Aligned_cols=142  Identities=21%  Similarity=0.268  Sum_probs=120.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++..++..++||||+. ++|.+.+.....   ..+++..+..++.|++.|+.|||+. +.+++||||||+||+++
T Consensus       119 v~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~  193 (382)
T 2vx3_A          119 VHLKRHFMFRNHLCLVFEMLS-YNLYDLLRNTNF---RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLC  193 (382)
T ss_dssp             CCEEEEEEETTEEEEEEECCC-CBHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEES
T ss_pred             EEeeeeeccCCceEEEEecCC-CCHHHHHhhcCc---CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEe
Confidence            467889999999999999995 699999876432   4578899999999999999999932 36899999999999995


Q ss_pred             --CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 --EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 --~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                        .+..+||+|||++.......    ....++..|+|||.+.+..++.++|+||||+++ |+|++|+.||.+.+
T Consensus       194 ~~~~~~~kL~DFG~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il-~elltg~~pf~~~~  262 (382)
T 2vx3_A          194 NPKRSAIKIVDFGSSCQLGQRI----YQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCIL-VEMHTGEPLFSGAN  262 (382)
T ss_dssp             STTSCCEEECCCTTCEETTCCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             cCCCCcEEEEeccCceeccccc----ccccCCccccChHHHcCCCCCcHHHHHHHHHHH-HHHHhCCCCCCCCC
Confidence              46779999999987664322    224578889999999999999999999999999 99999999998764

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.96  E-value=6.8e-31  Score=183.68  Aligned_cols=144  Identities=24%  Similarity=0.387  Sum_probs=122.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..+++|||+++++|.+.+...+    ..+++..+..++.|++.|+.+||   +++++|+||+|+||+++
T Consensus        66 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~  138 (267)
T 3t9t_A           66 VQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQR----GLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVG  138 (267)
T ss_dssp             CCEEEEECSSSSCEEEECCCTTCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEEC
T ss_pred             eeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCc----ccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEC
Confidence            578999999999999999999999999987543    45788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..++++|||++...............++..|+|||.+.+..++.++|+||+|+++ |+|++ |+.||...+
T Consensus       139 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~~g~~p~~~~~  210 (267)
T 3t9t_A          139 ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM-WEVFSEGKIPYENRS  210 (267)
T ss_dssp             GGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTSCCTTTTCC
T ss_pred             CCCCEEEcccccccccccccccccccccccccccChhhhcCCCccchhchhhhHHHH-HHHhccCCCCCCCCC
Confidence            999999999998876543221111223456679999999988899999999999999 99999 899998654

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.96  E-value=3.4e-30  Score=181.85  Aligned_cols=140  Identities=24%  Similarity=0.391  Sum_probs=122.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..+++|||+++++|.+.+...     ..+++..+..++.|++.|+.+||   +++++|+||+|+||+++
T Consensus        77 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~  148 (284)
T 2vgo_A           77 LRMYNYFHDRKRIYLMLEFAPRGELYKELQKH-----GRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMG  148 (284)
T ss_dssp             CCEEEEEECSSEEEEEECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEEC
T ss_pred             eeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEc
Confidence            57889999999999999999999999988754     35788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.++++|||++........   ....++..|+|||.+.+..++.++|+||+|+++ +++++|+.||...+
T Consensus       149 ~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~g~~pf~~~~  216 (284)
T 2vgo_A          149 YKGELKIADFGWSVHAPSLRR---RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLC-YEFLVGMPPFDSPS  216 (284)
T ss_dssp             TTCCEEECCCTTCEECSSSCB---CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHH-HHHHHSSCTTCCSS
T ss_pred             CCCCEEEecccccccCccccc---ccccCCCCcCCHHHhccCCCCcccchhhHHHHH-HHHHHCCCCCCCCC
Confidence            999999999998765433221   234578899999999998899999999999999 99999999997654

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.96  E-value=2e-30  Score=194.50  Aligned_cols=138  Identities=22%  Similarity=0.305  Sum_probs=112.5

Q ss_pred             CeEEEEEecCC------CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCLETE------NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~~~------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      |++++++...+      ..++||||+.+ ++.+.+.       ..+++..+..++.|++.|+.|||   +.+++||||||
T Consensus       124 v~l~~~~~~~~~~~~~~~~~lv~E~~~~-~l~~~~~-------~~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp  192 (464)
T 3ttj_A          124 ISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ-------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP  192 (464)
T ss_dssp             CCCSEEECSCCSTTTCCEEEEEEECCSE-EHHHHHT-------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred             CcEEEEEccCCccccCCeEEEEEeCCCC-CHHHHHh-------hcCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCh
Confidence            46778886543      45999999964 6777664       23778889999999999999999   89999999999


Q ss_pred             CCEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           75 SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        75 ~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +||+++.+..+||+|||++.......  ......+++.|+|||.+.+..++.++|+||+||++ ++|++|+.||.+.+
T Consensus       193 ~NIll~~~~~~kl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il-~ell~g~~pF~g~~  267 (464)
T 3ttj_A          193 SNIVVKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM-GEMVRHKILFPGRD  267 (464)
T ss_dssp             GGEEECTTSCEEECCCCCC-----CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             HhEEEeCCCCEEEEEEEeeeecCCCc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHH-HHHHhCCCCCCCCC
Confidence            99999999999999999987654322  22345689999999999999999999999999999 99999999998865

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=7.1e-30  Score=183.84  Aligned_cols=135  Identities=22%  Similarity=0.339  Sum_probs=112.6

Q ss_pred             CeEEEEEecC----CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCC--------CeE
Q 031436            1 MRLIGCCLET----ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR--------PIV   68 (159)
Q Consensus         1 v~l~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~--------~~~   68 (159)
                      |++++++...    ...+++|||+++|+|.+.+..      ..+++..+..++.|++.|+.|||   +.        +++
T Consensus        94 ~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~iv  164 (337)
T 3mdy_A           94 LGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKS------TTLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIA  164 (337)
T ss_dssp             CCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEE
T ss_pred             eeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEE
Confidence            5678888876    678999999999999999965      35788899999999999999999   77        999


Q ss_pred             EecCCCCCEEecCCCceEEEecCCCcccCCCccee---eeeecccccccCccccccCCCCCC------cceEeccccccC
Q 031436           69 FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRI---RGRVMGTFGYLPPEYIATGDCNEK------CDVYSFDGSRDS  139 (159)
Q Consensus        69 h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~---~~~~~~~~~~~ape~~~~~~~~~~------~DvwS~g~~~~~  139 (159)
                      ||||||+||+++.+..+|++|||++..........   .....++..|+|||.+.+.....+      +|+||||+++ |
T Consensus       165 H~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il-~  243 (337)
T 3mdy_A          165 HRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLIL-W  243 (337)
T ss_dssp             CSCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHH-H
T ss_pred             ecccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHH-H
Confidence            99999999999999999999999987654332211   123467889999999988776665      9999999999 9


Q ss_pred             cceecc
Q 031436          140 GHLTGR  145 (159)
Q Consensus       140 ~~~~g~  145 (159)
                      +|++|.
T Consensus       244 el~tg~  249 (337)
T 3mdy_A          244 EVARRC  249 (337)
T ss_dssp             HHHTTB
T ss_pred             HHHhcc
Confidence            999993

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.96  E-value=2.9e-31  Score=202.15  Aligned_cols=144  Identities=28%  Similarity=0.337  Sum_probs=121.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+ +..++||||+++|+|.+++.....   ..+++..+..++.|++.||.|||   +++++||||+|+||+++
T Consensus       325 v~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~---~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~  397 (535)
T 2h8h_A          325 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVG  397 (535)
T ss_dssp             CCEEEEECS-SSCEEEECCCTTEEHHHHHSHHHH---TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEC
T ss_pred             eeEEEEEee-ccceEeeehhcCCcHHHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEc
Confidence            578898876 778999999999999999864321   34788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..+||+|||++...............++..|+|||.+.+..++.++||||||+++ |+|++ |+.||.+.+
T Consensus       398 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l-~el~t~g~~P~~~~~  469 (535)
T 2h8h_A          398 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL-TELTTKGRVPYPGMV  469 (535)
T ss_dssp             GGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHH-HHHTTTTCCSSTTCC
T ss_pred             CCCcEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHH-HHHHhCCCCCCCCCC
Confidence            999999999999876543221111223456789999999988999999999999999 99999 999998754

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.96  E-value=2.6e-30  Score=184.44  Aligned_cols=142  Identities=23%  Similarity=0.316  Sum_probs=117.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++||||+++++|.+.+...     ..+++..+..++.|++.|+.|||   +.+++|+||+|.||+++
T Consensus        65 ~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~  136 (311)
T 4agu_A           65 VNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQ-----RGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILIT  136 (311)
T ss_dssp             CCEEEEEEETTEEEEEEECCSEEHHHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEC
T ss_pred             cchhheeecCCeEEEEEEeCCCchHHHHHhhh-----cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEc
Confidence            57899999999999999999998888877654     45788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.++++|||.+......... .....++..|+|||.+.+ ..++.++|+||+|+++ +++++|+.||.+.+
T Consensus       137 ~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il-~~l~~g~~p~~~~~  207 (311)
T 4agu_A          137 KHSVIKLCDFGFARLLTGPSDY-YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVF-AELLSGVPLWPGKS  207 (311)
T ss_dssp             TTSCEEECCCTTCEECC-------------GGGCCHHHHHTCSCCCTHHHHHHHHHHH-HHHHHSSCSCCCSS
T ss_pred             CCCCEEEeeCCCchhccCcccc-cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHH-HHHHhCCCCCCCCC
Confidence            9999999999998765433221 123457888999999876 5679999999999999 99999999998764

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.96  E-value=1.9e-30  Score=187.51  Aligned_cols=148  Identities=25%  Similarity=0.260  Sum_probs=117.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCC-----------------------------------CCCccchhhH
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQP-----------------------------------NFEPVTCSLR   45 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-----------------------------------~~~~~~~~~~   45 (159)
                      |+++++|.+++..++||||+++|+|.+.+......                                   ....+++..+
T Consensus        91 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (345)
T 3hko_A           91 ARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLI  170 (345)
T ss_dssp             CCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHH
T ss_pred             ceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHH
Confidence            57899999999999999999999999988521100                                   0122456677


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCC--ceEEEecCCCcccCCCc---ceeeeeecccccccCccccc
Q 031436           46 LKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQS--VAKLFDFSYSESIPEGE---TRIRGRVMGTFGYLPPEYIA  120 (159)
Q Consensus        46 ~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~--~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~~~ape~~~  120 (159)
                      ..++.|++.|+.|||   +++++|+||+|+||+++.+.  .+|++|||++.......   ........+++.|+|||.+.
T Consensus       171 ~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  247 (345)
T 3hko_A          171 SNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLN  247 (345)
T ss_dssp             HHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhc
Confidence            889999999999999   89999999999999998665  79999999987543211   11123446788999999987


Q ss_pred             c--CCCCCCcceEeccccccCcceecccccccCC
Q 031436          121 T--GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus       121 ~--~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +  ..++.++|+||||+++ |+|++|+.||.+.+
T Consensus       248 ~~~~~~~~~~DiwslG~il-~el~~g~~pf~~~~  280 (345)
T 3hko_A          248 TTNESYGPKCDAWSAGVLL-HLLLMGAVPFPGVN  280 (345)
T ss_dssp             CSSSCCCTHHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             cCCCCCCcHHHHHHHHHHH-HHHHHCCCCCCCCC
Confidence            5  5789999999999999 99999999997754

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=2.5e-30  Score=189.31  Aligned_cols=145  Identities=23%  Similarity=0.369  Sum_probs=112.7

Q ss_pred             CeEEEEEec-CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe
Q 031436            1 MRLIGCCLE-TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~   79 (159)
                      |+++++|.+ ++..+++|||+++|+|.+++....    ..+++..+..++.|++.|+.|||   +++++||||||+||++
T Consensus       153 v~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll  225 (373)
T 3c1x_A          153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCML  225 (373)
T ss_dssp             CCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEE
T ss_pred             ceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEE
Confidence            567888754 467899999999999999997543    45778888999999999999999   8999999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcce---eeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCC
Q 031436           80 QEQSVAKLFDFSYSESIPEGETR---IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDW  153 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~  153 (159)
                      +.+..+|++|||++.........   ......++..|+|||.+.+..++.++|+||||+++ |++++ |.+||...+.
T Consensus       226 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il-~ellt~~~~p~~~~~~  302 (373)
T 3c1x_A          226 DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL-WELMTRGAPPYPDVNT  302 (373)
T ss_dssp             CTTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTSCCSCTTSCS
T ss_pred             CCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHH-HHHHhCcCCCCCCCCH
Confidence            99999999999998765332211   11223456789999999999999999999999999 99999 7889977654

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.96  E-value=5.4e-30  Score=184.73  Aligned_cols=148  Identities=23%  Similarity=0.342  Sum_probs=123.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCC-----------CCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQP-----------NFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVF   69 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-----------~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h   69 (159)
                      |+++++|.+++..++||||+++|+|.+++......           ....+++..+..++.|++.|+.|||   +++++|
T Consensus       104 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH  180 (334)
T 2pvf_A          104 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIH  180 (334)
T ss_dssp             CCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEEC
T ss_pred             eeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeC
Confidence            57899999999999999999999999998764321           1134788889999999999999999   899999


Q ss_pred             ecCCCCCEEecCCCceEEEecCCCcccCCCcce-eeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccc
Q 031436           70 RNVKPSNILFQEQSVAKLFDFSYSESIPEGETR-IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAW  147 (159)
Q Consensus        70 ~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p  147 (159)
                      +||+|.||+++.+..+|++|||++......... ......++..|+|||.+.+..++.++|+||||+++ |+|++ |+.|
T Consensus       181 ~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~ellt~g~~p  259 (334)
T 2pvf_A          181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM-WEIFTLGGSP  259 (334)
T ss_dssp             SCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHH-HHHHTTSCCS
T ss_pred             CCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHH-HHHHhCCCCC
Confidence            999999999999999999999998766443221 12223456789999999888899999999999999 99999 9999


Q ss_pred             cccCC
Q 031436          148 YRSED  152 (159)
Q Consensus       148 ~~~~~  152 (159)
                      |.+.+
T Consensus       260 ~~~~~  264 (334)
T 2pvf_A          260 YPGIP  264 (334)
T ss_dssp             STTCC
T ss_pred             cCcCC
Confidence            98754

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.96  E-value=1.3e-30  Score=186.39  Aligned_cols=143  Identities=22%  Similarity=0.329  Sum_probs=116.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++|+||+|+||+++
T Consensus        74 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~  145 (316)
T 2ac3_A           74 LELIEFFEEEDRFYLVFEKMRGGSILSHIHKR-----RHFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCE  145 (316)
T ss_dssp             CCEEEEEEETTEEEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEES
T ss_pred             eeEEEEEeeCCEEEEEEEcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEc
Confidence            57899999999999999999999999998754     45788899999999999999999   89999999999999998


Q ss_pred             CCCc---eEEEecCCCcccCCCcc------eeeeeecccccccCcccccc-----CCCCCCcceEeccccccCcceeccc
Q 031436           81 EQSV---AKLFDFSYSESIPEGET------RIRGRVMGTFGYLPPEYIAT-----GDCNEKCDVYSFDGSRDSGHLTGRA  146 (159)
Q Consensus        81 ~~~~---~~l~d~~~~~~~~~~~~------~~~~~~~~~~~~~ape~~~~-----~~~~~~~DvwS~g~~~~~~~~~g~~  146 (159)
                      .+..   +|++|||++........      .......++..|+|||.+.+     ..++.++|+||+|+++ |+|++|+.
T Consensus       146 ~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il-~~l~~g~~  224 (316)
T 2ac3_A          146 HPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL-YILLSGYP  224 (316)
T ss_dssp             CSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHH-HHHHHSSC
T ss_pred             cCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHH-HHHHHCCC
Confidence            7654   89999998765532211      01122347889999999875     4578999999999999 99999999


Q ss_pred             ccccCC
Q 031436          147 WYRSED  152 (159)
Q Consensus       147 p~~~~~  152 (159)
                      ||.+.+
T Consensus       225 pf~~~~  230 (316)
T 2ac3_A          225 PFVGRC  230 (316)
T ss_dssp             SCCCCC
T ss_pred             CCcccc
Confidence            998754

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.96  E-value=3.6e-30  Score=194.44  Aligned_cols=140  Identities=29%  Similarity=0.421  Sum_probs=120.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++++|.+.+..++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        99 v~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~  170 (494)
T 3lij_A           99 MKLYDFFEDKRNYYLVMECYKGGELFDEIIHR-----MKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLE  170 (494)
T ss_dssp             CCEEEEEECSSEEEEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEES
T ss_pred             CeEEEEEEeCCEEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEe
Confidence            67899999999999999999999999888654     45788889999999999999999   89999999999999997


Q ss_pred             CC---CceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQ---SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ..   ..+|++|||++........  .....+++.|+|||.+. ..++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       171 ~~~~~~~~kl~DfG~a~~~~~~~~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il-~~ll~g~~pf~~~~  241 (494)
T 3lij_A          171 SKEKDALIKIVDFGLSAVFENQKK--MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVIL-FILLAGYPPFGGQT  241 (494)
T ss_dssp             CSSTTCCEEECCCTTCEECBTTBC--BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             CCCCCCcEEEEECCCCeECCCCcc--ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHH-HHHHhCCCCCCCCC
Confidence            53   4599999999876543322  22346899999999886 4689999999999999 99999999998754

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.96  E-value=4.4e-30  Score=185.36  Aligned_cols=142  Identities=20%  Similarity=0.290  Sum_probs=123.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..+++|||+.+++|.+.+...     ..+++..+..++.|++.++.|||   +++++|+||+|+||+++
T Consensus       104 v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~  175 (335)
T 2owb_A          104 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLN  175 (335)
T ss_dssp             CCEEEEEECSSEEEEEECCCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEC
T ss_pred             CeEEEEEecCCeEEEEEecCCCCCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEc
Confidence            57899999999999999999999999988653     45788999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||++......... .....++..|+|||.+.+..++.++|+||||+++ |+|++|+.||...+
T Consensus       176 ~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~g~~pf~~~~  245 (335)
T 2owb_A          176 EDLEVKIGDFGLATKVEYDGER-KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIM-YTLLVGKPPFETSC  245 (335)
T ss_dssp             TTCCEEECCCTTCEECCSTTCC-BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHH-HHHHHSSCTTCCSS
T ss_pred             CCCCEEEeeccCceecccCccc-ccccCCCccccCHHHhccCCCCchhhHHHHHHHH-HHHHHCcCCCCCCC
Confidence            9999999999998765432221 2234578899999999988899999999999999 99999999998754

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.96  E-value=1.8e-30  Score=183.55  Aligned_cols=139  Identities=22%  Similarity=0.350  Sum_probs=117.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..+++|||+++|+|.+++....    ..+++..+..++.|++.|+.|||   +++++|+||||+||+++
T Consensus        75 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~  147 (289)
T 4fvq_A           75 VLNYGVCVCGDENILVQEFVKFGSLDTYLKKNK----NCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLI  147 (289)
T ss_dssp             CCEEEEECCTTCCEEEEECCTTCBHHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE
T ss_pred             eEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEe
Confidence            578999999999999999999999999987542    34788889999999999999999   89999999999999998


Q ss_pred             CCCc--------eEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCccee-ccccccc
Q 031436           81 EQSV--------AKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLT-GRAWYRS  150 (159)
Q Consensus        81 ~~~~--------~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~  150 (159)
                      .+..        ++++|||.+.......     ...++..|+|||.+.+ ..++.++|+||+|+++ |+|++ +.+||..
T Consensus       148 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il-~el~~g~~~~~~~  221 (289)
T 4fvq_A          148 REEDRKTGNPPFIKLSDPGISITVLPKD-----ILQERIPWVPPECIENPKNLNLATDKWSFGTTL-WEICSGGDKPLSA  221 (289)
T ss_dssp             ECCBGGGTBCCEEEECCCCSCTTTSCHH-----HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHH-HHHHTTTCCTTTT
T ss_pred             cCCcccccccceeeeccCcccccccCcc-----ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHH-HHHHcCCCCCccc
Confidence            7776        9999999876553221     2346788999999987 6789999999999999 99999 4566655


Q ss_pred             CC
Q 031436          151 ED  152 (159)
Q Consensus       151 ~~  152 (159)
                      .+
T Consensus       222 ~~  223 (289)
T 4fvq_A          222 LD  223 (289)
T ss_dssp             SC
T ss_pred             cc
Confidence            43

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.96  E-value=4.5e-30  Score=181.04  Aligned_cols=141  Identities=30%  Similarity=0.371  Sum_probs=121.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..+++|||+++++|.+.+...     ..+++..+..++.|++.|+.|||   +++++|+||+|.||+++
T Consensus        68 ~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~  139 (284)
T 3kk8_A           68 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLA  139 (284)
T ss_dssp             CCEEEEEECSSEEEEEECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEES
T ss_pred             CeEEEEEEcCCEEEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEe
Confidence            57899999999999999999999998887654     45788899999999999999999   89999999999999997


Q ss_pred             CCCc---eEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSV---AKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~---~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..   ++++|||.+.........  ....++..|+|||.+.+..++.++|+||+|+++ ++|++|+.||.+.+
T Consensus       140 ~~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~~l~~g~~pf~~~~  211 (284)
T 3kk8_A          140 SKAKGAAVKLADFGLAIEVNDSEAW--HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL-YILLVGYPPFWDED  211 (284)
T ss_dssp             SSSTTCCEEECCCTTCEECCSSCBC--CCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             cCCCCCcEEEeeceeeEEcccCccc--cCCCCCcCCcCchhhcCCCCCcccchHHHHHHH-HHHHHCCCCCCCCc
Confidence            6544   999999998765433221  234578899999999999999999999999999 99999999997654

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.96  E-value=6.4e-30  Score=181.24  Aligned_cols=142  Identities=20%  Similarity=0.290  Sum_probs=123.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..+++|||+++++|.+.+...     ..+++..+..++.|++.|+.|||   +++++|+||+|+||+++
T Consensus        78 v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~  149 (294)
T 2rku_A           78 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLN  149 (294)
T ss_dssp             CCEEEEEECSSEEEEEEECCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEC
T ss_pred             eeeeeeeccCCEEEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEc
Confidence            57899999999999999999999999988653     45788999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||.+......... .....++..|+|||.+.+..++.++|+||+|+++ ++|++|+.||...+
T Consensus       150 ~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~~l~~g~~p~~~~~  219 (294)
T 2rku_A          150 EDLEVKIGDFGLATKVEYDGER-KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIM-YTLLVGKPPFETSC  219 (294)
T ss_dssp             TTCCEEECCCTTCEECCSTTCC-BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHH-HHHHHSSCTTCCSS
T ss_pred             CCCCEEEEeccCceecccCccc-cccccCCCCcCCcchhccCCCCchhhHHHHHHHH-HHHHhCCCCCCCCC
Confidence            9999999999998765432221 2234578889999999988899999999999999 99999999998754

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.96  E-value=2.9e-30  Score=187.37  Aligned_cols=138  Identities=27%  Similarity=0.407  Sum_probs=119.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++||||+. |++.+.+...+    ..+++..+..++.|++.|+.|||   +++++|+||+|+||+++
T Consensus       117 v~~~~~~~~~~~~~lv~e~~~-g~l~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~  188 (348)
T 1u5q_A          117 IQYRGCYLREHTAWLVMEYCL-GSASDLLEVHK----KPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLS  188 (348)
T ss_dssp             CCEEEEEEETTEEEEEEECCS-EEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEE
T ss_pred             eeEEEEEEECCeEEEEEecCC-CCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEC
Confidence            578999999999999999996 68888775432    46788999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccc---cCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA---TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~---~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+|++|||++......     ....+++.|+|||.+.   ...++.++|+||||+++ ++|++|+.||.+.+
T Consensus       189 ~~~~~kL~DfG~a~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il-~ell~g~~p~~~~~  257 (348)
T 1u5q_A          189 EPGLVKLGDFGSASIMAPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC-IELAERKPPLFNMN  257 (348)
T ss_dssp             TTTEEEECCCTTCBSSSSB-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHH-HHHHHSSCTTTTSC
T ss_pred             CCCCEEEeeccCceecCCC-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHH-HHHHhCCCCCCCCC
Confidence            9999999999998765332     1245788999999985   46689999999999999 99999999997654

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.96  E-value=2.7e-30  Score=181.07  Aligned_cols=139  Identities=28%  Similarity=0.469  Sum_probs=113.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCC---eEEecCCCCCE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRP---IVFRNVKPSNI   77 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~---~~h~~l~~~ni   77 (159)
                      +++++++.+++..+++|||+++++|.+.+..      ..+++..+..++.|++.|+.|||   +++   ++|+|++|+||
T Consensus        69 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~------~~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Ni  139 (271)
T 3dtc_A           69 IALRGVCLKEPNLCLVMEFARGGPLNRVLSG------KRIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNI  139 (271)
T ss_dssp             CCEEEEECCC--CEEEEECCTTEEHHHHHTS------SCCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGE
T ss_pred             eeEEEEEecCCceEEEEEcCCCCCHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHE
Confidence            5789999999999999999999999988853      45788999999999999999999   777   89999999999


Q ss_pred             EecC--------CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccc
Q 031436           78 LFQE--------QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYR  149 (159)
Q Consensus        78 l~~~--------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~  149 (159)
                      +++.        +..++++|||.+........   ....++..|+|||.+.+..++.++|+||+|+++ +++++|+.||.
T Consensus       140 l~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~~l~~g~~p~~  215 (271)
T 3dtc_A          140 LILQKVENGDLSNKILKITDFGLAREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLL-WELLTGEVPFR  215 (271)
T ss_dssp             EESSCCSSSCCSSCCEEECCCCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHH-HHHHHCCCTTT
T ss_pred             EEecccccccccCcceEEccCCcccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHH-HHHHhCCCCCC
Confidence            9986        56799999998875543222   123578899999999998999999999999999 99999999998


Q ss_pred             cCC
Q 031436          150 SED  152 (159)
Q Consensus       150 ~~~  152 (159)
                      +.+
T Consensus       216 ~~~  218 (271)
T 3dtc_A          216 GID  218 (271)
T ss_dssp             TSC
T ss_pred             CCC
Confidence            754

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.96  E-value=2.5e-30  Score=185.92  Aligned_cols=146  Identities=23%  Similarity=0.305  Sum_probs=121.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCC-----------CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ-----------PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVF   69 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-----------~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h   69 (159)
                      +++++++.+++..+++|||+++++|.+.+...+.           .....+++..+..++.|++.|+.|||   +++++|
T Consensus        89 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH  165 (327)
T 1fvr_A           89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIH  165 (327)
T ss_dssp             CCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEEC
T ss_pred             hhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccC
Confidence            5789999999999999999999999999876430           11246889999999999999999999   899999


Q ss_pred             ecCCCCCEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-ccccc
Q 031436           70 RNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWY  148 (159)
Q Consensus        70 ~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~  148 (159)
                      +||+|+||+++.+..+|++|||++.......  ......++..|+|||.+.+..++.++|+||+|+++ |+|++ |+.||
T Consensus       166 ~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~ellt~g~~pf  242 (327)
T 1fvr_A          166 RDLAARNILVGENYVAKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL-WEIVSLGGTPY  242 (327)
T ss_dssp             SCCSGGGEEECGGGCEEECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHH-HHHHTTSCCTT
T ss_pred             CCCccceEEEcCCCeEEEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHH-HHHHcCCCCCC
Confidence            9999999999999999999999876432211  11223456789999999888899999999999999 99998 99999


Q ss_pred             ccCC
Q 031436          149 RSED  152 (159)
Q Consensus       149 ~~~~  152 (159)
                      .+.+
T Consensus       243 ~~~~  246 (327)
T 1fvr_A          243 CGMT  246 (327)
T ss_dssp             TTCC
T ss_pred             CCCc
Confidence            7754

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.96  E-value=5.7e-30  Score=181.39  Aligned_cols=138  Identities=18%  Similarity=0.257  Sum_probs=116.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++||||+.+ ++.+.+....    ..+++..+..++.|++.|+.|||   +++++|+||||+||+++
T Consensus        64 v~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~  135 (292)
T 3o0g_A           64 VRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCN----GDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLIN  135 (292)
T ss_dssp             CCEEEEEEETTEEEEEEECCSE-EHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEC
T ss_pred             eeEEeEEEeCCEEEEEEecCCC-CHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEc
Confidence            5789999999999999999964 7777665432    46889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCC-CCCCcceEeccccccCcceeccccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD-CNEKCDVYSFDGSRDSGHLTGRAWY  148 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~DvwS~g~~~~~~~~~g~~p~  148 (159)
                      .++.+|++|||++......... .....++..|+|||.+.+.. ++.++|+||+|+++ ++|++|..||
T Consensus       136 ~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il-~~l~~~~~p~  202 (292)
T 3o0g_A          136 RNGELKLANFGLARAFGIPVRC-YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIF-AELANAGRPL  202 (292)
T ss_dssp             TTSCEEECCCTTCEECCSCCSC-CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHH-HHHTTTSCCS
T ss_pred             CCCCEEEeecccceecCCcccc-ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHH-HHHHHcCCCC
Confidence            9999999999998765432221 22345788899999998766 79999999999999 9999887664

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.96  E-value=7.9e-30  Score=180.66  Aligned_cols=139  Identities=20%  Similarity=0.246  Sum_probs=116.9

Q ss_pred             EEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec---C
Q 031436            5 GCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ---E   81 (159)
Q Consensus         5 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~---~   81 (159)
                      .+..+++..+++|||+ +++|.+.+...+    ..+++..+..++.|++.|+.|||   +++++|+||+|+||+++   .
T Consensus        72 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~  143 (296)
T 3uzp_A           72 WCGAEGDYNVMVMELL-GPSLEDLFNFCS----RKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKK  143 (296)
T ss_dssp             EEEEETTEEEEEEECC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGG
T ss_pred             cccCCCCceEEEEEec-CCCHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCC
Confidence            3445667789999999 899999987432    45889999999999999999999   89999999999999994   7


Q ss_pred             CCceEEEecCCCcccCCCcce------eeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           82 QSVAKLFDFSYSESIPEGETR------IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        82 ~~~~~l~d~~~~~~~~~~~~~------~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +..+|++|||++.........      ......++..|+|||.+.+..++.++|+||||+++ |+|++|+.||.+.+
T Consensus       144 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~g~~pf~~~~  219 (296)
T 3uzp_A          144 GNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVL-MYFNLGSLPWQGLK  219 (296)
T ss_dssp             TTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHH-HHHHHSSCTTSSCC
T ss_pred             CCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHH-HHHHhCCCCCCCcC
Confidence            788999999998765433221      12334678899999999999999999999999999 99999999998754

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.96  E-value=1.3e-29  Score=183.50  Aligned_cols=140  Identities=19%  Similarity=0.284  Sum_probs=119.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe-
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF-   79 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~-   79 (159)
                      +.+++++...+..+++|||+ ++++.+.+.....   ..+++..+..++.|++.|+.|||   +++++|+||||.||++ 
T Consensus        85 ~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~---~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~  157 (355)
T 2eu9_A           85 VLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNF---QPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFV  157 (355)
T ss_dssp             CCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEES
T ss_pred             EEeeeeeeeCCeEEEEEecc-CCChHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEe
Confidence            35678888889999999999 6788887765422   46888999999999999999999   8999999999999999 


Q ss_pred             ------------------cCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcc
Q 031436           80 ------------------QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGH  141 (159)
Q Consensus        80 ------------------~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~  141 (159)
                                        +.+..+|++|||++.......    ....++..|+|||.+.+..++.++|+||+|+++ |+|
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il-~el  232 (355)
T 2eu9_A          158 NSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSIGCIL-FEY  232 (355)
T ss_dssp             CCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHH-HHH
T ss_pred             cccccccccccccccccccCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecCCCCCccchHHHHHHH-HHH
Confidence                              566789999999987543322    224578899999999999999999999999999 999


Q ss_pred             eecccccccCC
Q 031436          142 LTGRAWYRSED  152 (159)
Q Consensus       142 ~~g~~p~~~~~  152 (159)
                      ++|+.||.+.+
T Consensus       233 ~~g~~pf~~~~  243 (355)
T 2eu9_A          233 YRGFTLFQTHE  243 (355)
T ss_dssp             HHSSCSCCCSS
T ss_pred             HhCCCCCCCCC
Confidence            99999998754

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.96  E-value=4.8e-30  Score=193.42  Aligned_cols=140  Identities=27%  Similarity=0.396  Sum_probs=119.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+.+..++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        84 v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~  155 (486)
T 3mwu_A           84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLE  155 (486)
T ss_dssp             CCEEEEEECSSEEEEEECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEES
T ss_pred             CeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEe
Confidence            57899999999999999999999999988654     45888999999999999999999   89999999999999995


Q ss_pred             ---CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 ---EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ---~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                         .+..+|++|||++........  .....+++.|+|||.+.+ .++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       156 ~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il-~~ll~g~~pf~~~~  226 (486)
T 3mwu_A          156 SKEKDCDIKIIDFGLSTCFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVIL-YILLSGTPPFYGKN  226 (486)
T ss_dssp             SSSTTCCEEECSCSCTTTBCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             cCCCCCCEEEEECCcCeECCCCCc--cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHH-HHHHhCCCCCCCCC
Confidence               345799999999876543322  223468899999999876 589999999999999 99999999997754

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.96  E-value=5.8e-30  Score=186.81  Aligned_cols=141  Identities=25%  Similarity=0.388  Sum_probs=121.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++...+..++||||+++++|.+.+...     ..+++..+..++.|++.|+.|||   +.+++|+|++|.||+++
T Consensus       163 v~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~  234 (365)
T 2y7j_A          163 ITLIDSYESSSFMFLVFDLMRKGELFDYLTEK-----VALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLD  234 (365)
T ss_dssp             CCEEEEEEBSSEEEEEECCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC
T ss_pred             eEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEC
Confidence            46789999999999999999999999988653     45788999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc------CCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT------GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~------~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.++++|||++........  .....+++.|+|||.+.+      ..++.++|+||||+++ |+|++|+.||...+
T Consensus       235 ~~~~ikl~DfG~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il-~ell~g~~pf~~~~  309 (365)
T 2y7j_A          235 DNMQIRLSDFGFSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVIL-FTLLAGSPPFWHRR  309 (365)
T ss_dssp             TTCCEEECCCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             CCCCEEEEecCcccccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHH-HHHHHCCCCCCCCC
Confidence            999999999998876644322  123467889999999863      3578999999999999 99999999997643

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=3.6e-30  Score=185.74  Aligned_cols=144  Identities=23%  Similarity=0.287  Sum_probs=116.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+.+..++||||+++|+|.+.+....    ..+++..+..++.|++.|+.+||   +.+++|+||+|.||+++
T Consensus       109 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~  181 (333)
T 1mqb_A          109 IRLEGVISKYKPMMIITEYMENGALDKFLREKD----GEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVN  181 (333)
T ss_dssp             CCEEEEECSSSSEEEEEECCTTEEHHHHHHHTT----TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEC
T ss_pred             CcEEEEEecCCCcEEEEeCCCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEEC
Confidence            578999999999999999999999999987542    45788999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcce--eeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..+|++|||++.........  ......++..|+|||.+.+..++.++|+||||+++ +++++ |+.||...+
T Consensus       182 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~ellt~g~~pf~~~~  255 (333)
T 1mqb_A          182 SNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVM-WEVMTYGERPYWELS  255 (333)
T ss_dssp             TTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHH-HHHHTTSCCTTTTCC
T ss_pred             CCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHH-HHHHcCCCCCcccCC
Confidence            9999999999998765433211  11122346679999999988999999999999999 99998 999997643

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.96  E-value=2.2e-30  Score=195.11  Aligned_cols=140  Identities=26%  Similarity=0.377  Sum_probs=121.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+.+..++||||+.+|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        89 v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~  160 (484)
T 3nyv_A           89 MKLYEFFEDKGYFYLVGEVYTGGELFDEIISR-----KRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLE  160 (484)
T ss_dssp             CCEEEEEECSSEEEEEECCCCSCBHHHHHHTC-----SCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEES
T ss_pred             CcEEEEEEeCCEEEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEe
Confidence            57899999999999999999999999988754     45889999999999999999999   89999999999999994


Q ss_pred             ---CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 ---EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ---~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                         .+..+|++|||++........  .....+++.|+|||.+.+ .++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       161 ~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il-~~ll~g~~pf~~~~  231 (484)
T 3nyv_A          161 SKSKDANIRIIDFGLSTHFEASKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVIL-YILLSGCPPFNGAN  231 (484)
T ss_dssp             SSSTTCCEEECCTTHHHHBCCCCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             cCCCCCcEEEEeeeeeEEcccccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHH-HHHHHCCCCCCCCC
Confidence               567899999998876543322  123458899999999876 689999999999999 99999999998764

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.96  E-value=1.7e-30  Score=184.22  Aligned_cols=142  Identities=23%  Similarity=0.405  Sum_probs=115.8

Q ss_pred             CeEEEEEec--CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLE--TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      |+++++|..  .+..++||||+++|+|.+.+....    ..+++..+..++.|++.|+.|||   +.+++|+||+|.||+
T Consensus        74 v~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil  146 (295)
T 3ugc_A           74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNIL  146 (295)
T ss_dssp             CCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCG----GGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEE
T ss_pred             eeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcc----cccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEE
Confidence            567888854  456899999999999999987542    45888899999999999999999   899999999999999


Q ss_pred             ecCCCceEEEecCCCcccCCCcc--eeeeeecccccccCccccccCCCCCCcceEeccccccCcceeccccccc
Q 031436           79 FQEQSVAKLFDFSYSESIPEGET--RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        79 ~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      ++.+..+|++|||++........  .......++..|+|||.+.+..++.++|+||||+++ +++++|..|+..
T Consensus       147 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~~l~~g~~~~~~  219 (295)
T 3ugc_A          147 VENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL-YELFTYIEKSKS  219 (295)
T ss_dssp             EEETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHH-HHHHHTTCTTCS
T ss_pred             EcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHH-HHHHhcccccCC
Confidence            99999999999999876543321  112233456679999999999999999999999999 999999888764

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.96  E-value=3.6e-30  Score=181.46  Aligned_cols=143  Identities=23%  Similarity=0.303  Sum_probs=117.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+ +..+++|||+++++|.+.+....    ..++...+..++.|++.|+.+||   +++++|+||+|.||+++
T Consensus        76 ~~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~  147 (281)
T 3cc6_A           76 VKLIGIIEE-EPTWIIMELYPYGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVA  147 (281)
T ss_dssp             CCEEEEECS-SSCEEEEECCTTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEE
T ss_pred             ceEEEEEcC-CCCEEEEecCCCCCHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEC
Confidence            467888764 56799999999999999987542    45788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..++++|||++...............++..|+|||.+.+..++.++|+||||+++ |++++ |+.||...+
T Consensus       148 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~llt~g~~p~~~~~  219 (281)
T 3cc6_A          148 SPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCM-WEILSFGKQPFFWLE  219 (281)
T ss_dssp             ETTEEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTTCCTTTTSC
T ss_pred             CCCcEEeCccCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHH-HHHHhCCCCCcccCC
Confidence            999999999998876544332222333456789999999888899999999999999 99998 999997543

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.96  E-value=6.8e-30  Score=193.36  Aligned_cols=141  Identities=29%  Similarity=0.403  Sum_probs=121.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++++|.+++..++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||+|+||+++
T Consensus       109 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~  180 (504)
T 3q5i_A          109 IKLFDVFEDKKYFYLVTEFYEGGELFEQIINR-----HKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLE  180 (504)
T ss_dssp             CCEEEEEECSSEEEEEEECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEES
T ss_pred             CeEEEEEEcCCEEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEe
Confidence            57899999999999999999999999988654     45889999999999999999999   89999999999999998


Q ss_pred             CCC---ceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQS---VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~---~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+.   .+|++|||++........  .....+++.|+|||.+. ..++.++|+||+|+++ |+|++|..||.+.+.
T Consensus       181 ~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il-~~ll~g~~pf~~~~~  252 (504)
T 3q5i_A          181 NKNSLLNIKIVDFGLSSFFSKDYK--LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIM-YILLCGYPPFGGQND  252 (504)
T ss_dssp             STTCCSSEEECCCTTCEECCTTSC--BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHH-HHHHHSSCSSCCSSH
T ss_pred             cCCCCccEEEEECCCCEEcCCCCc--cccccCCcCCCCHHHhc-cCCCchHHHHHHHHHH-HHHHhCCCCCCCCCH
Confidence            764   699999999876644322  12346889999999986 4689999999999999 999999999987653

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.96  E-value=6.4e-30  Score=191.39  Aligned_cols=142  Identities=20%  Similarity=0.290  Sum_probs=112.8

Q ss_pred             CeEEEEEec-----CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC
Q 031436            1 MRLIGCCLE-----TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS   75 (159)
Q Consensus         1 v~l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~   75 (159)
                      |++++++..     ....++|||++ +++|.+.+...     ..+++..+..++.|++.||.|||   +.+++||||||+
T Consensus       115 v~l~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~  185 (458)
T 3rp9_A          115 VKVLDIVIPKDVEKFDELYVVLEIA-DSDFKKLFRTP-----VYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPA  185 (458)
T ss_dssp             CCEEEECCCSCTTTCCCEEEEECCC-SEEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGG
T ss_pred             CceEEEEecCCcccCceEEEEEecc-ccchhhhcccC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChh
Confidence            578888843     35689999998 57999988754     45889999999999999999999   899999999999


Q ss_pred             CEEecCCCceEEEecCCCcccCCCcc--------------------------eeeeeecccccccCcccc-ccCCCCCCc
Q 031436           76 NILFQEQSVAKLFDFSYSESIPEGET--------------------------RIRGRVMGTFGYLPPEYI-ATGDCNEKC  128 (159)
Q Consensus        76 nil~~~~~~~~l~d~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~ape~~-~~~~~~~~~  128 (159)
                      |||++.+..+||+|||+++.......                          .......+++.|+|||++ ....++.++
T Consensus       186 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~  265 (458)
T 3rp9_A          186 NCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAI  265 (458)
T ss_dssp             GEEECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHH
T ss_pred             hEEECCCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHh
Confidence            99999999999999999876542211                          112234578899999986 456799999


Q ss_pred             ceEeccccccCccee-----------cccccccCC
Q 031436          129 DVYSFDGSRDSGHLT-----------GRAWYRSED  152 (159)
Q Consensus       129 DvwS~g~~~~~~~~~-----------g~~p~~~~~  152 (159)
                      ||||+||++ |||++           |+++|++.+
T Consensus       266 DiwSlG~il-~elltg~~~~~~~~~~~~p~f~g~~  299 (458)
T 3rp9_A          266 DVWSIGCIF-AELLNMIKENVAYHADRGPLFPGSS  299 (458)
T ss_dssp             HHHHHHHHH-HHHHTTSTTTCSSGGGCCCSCC---
T ss_pred             HHHHHHHHH-HHHHHhccccccccccccccCCCCc
Confidence            999999999 99998           777777654

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.96  E-value=1.1e-29  Score=182.22  Aligned_cols=131  Identities=24%  Similarity=0.337  Sum_probs=108.3

Q ss_pred             ceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecCC
Q 031436           13 PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY   92 (159)
Q Consensus        13 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~~   92 (159)
                      .+++|||+++++|.+.+.....  ....+...+..++.|++.|+.|||   +++++||||||.||+++.+..+|++|||+
T Consensus       136 ~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~  210 (332)
T 3qd2_B          136 LYIQMQLCRKENLKDWMNRRCS--LEDREHGVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGL  210 (332)
T ss_dssp             EEEEEECCCSSCHHHHHHTCCS--GGGSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             EEEEEEecCCCCHHHHHhcccC--ccchhhHHHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCc
Confidence            7899999999999999976432  133455567889999999999999   89999999999999999999999999999


Q ss_pred             CcccCCCcc-----------eeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccc
Q 031436           93 SESIPEGET-----------RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYR  149 (159)
Q Consensus        93 ~~~~~~~~~-----------~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~  149 (159)
                      +........           .......+++.|+|||.+.+..++.++|+||+|+++ |+|++|..|+.
T Consensus       211 a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il-~el~~~~~~~~  277 (332)
T 3qd2_B          211 VTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLIL-FELLYSFSTQM  277 (332)
T ss_dssp             CEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHH-HHHHSCCCCHH
T ss_pred             ccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHH-HHHHHcCCChh
Confidence            876654321           111234578899999999999999999999999999 99999887764

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.96  E-value=1.5e-30  Score=187.36  Aligned_cols=149  Identities=22%  Similarity=0.330  Sum_probs=123.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCC---------CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ---------PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN   71 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---------~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~   71 (159)
                      |+++++|.+++..+++|||+++|+|.+.+.....         .....++...+..++.|++.|+.|||   +.+++|+|
T Consensus       113 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~D  189 (333)
T 2i1m_A          113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRD  189 (333)
T ss_dssp             CCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSC
T ss_pred             eeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCC
Confidence            5789999999999999999999999998864210         00135788899999999999999999   89999999


Q ss_pred             CCCCCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccc
Q 031436           72 VKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYR  149 (159)
Q Consensus        72 l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~  149 (159)
                      |+|.||+++.+..++++|||++........ .......++..|+|||.+.+..++.++|+||||+++ |+|++ |..||.
T Consensus       190 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~el~t~g~~p~~  268 (333)
T 2i1m_A          190 VAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL-WEIFSLGLNPYP  268 (333)
T ss_dssp             CSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHH-HHHTTTSCCSST
T ss_pred             cccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHH-HHHHcCCCCCCc
Confidence            999999999999999999998875543222 112233456789999999988999999999999999 99998 999998


Q ss_pred             cCCC
Q 031436          150 SEDW  153 (159)
Q Consensus       150 ~~~~  153 (159)
                      +...
T Consensus       269 ~~~~  272 (333)
T 2i1m_A          269 GILV  272 (333)
T ss_dssp             TCCS
T ss_pred             ccch
Confidence            7653

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.96  E-value=8.4e-30  Score=179.58  Aligned_cols=141  Identities=26%  Similarity=0.370  Sum_probs=120.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..+++|||+++++|.+.+...     ..+++..+..++.|++.|+.+||   +++++|+||+|.||+++
T Consensus        71 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~  142 (283)
T 3bhy_A           71 ITLHDIFENKTDVVLILELVSGGELFDFLAEK-----ESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLL  142 (283)
T ss_dssp             CCEEEEEECSSEEEEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEES
T ss_pred             eehhheecCCCeEEEEEeecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEe
Confidence            57889999999999999999999999988653     45788999999999999999999   89999999999999998


Q ss_pred             CCC----ceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQS----VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~----~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+.    .++++|||.+........  .....++..|+|||.+.+..++.++|+||||+++ +++++|+.||.+.+
T Consensus       143 ~~~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~g~~p~~~~~  215 (283)
T 3bhy_A          143 DKNVPNPRIKLIDFGIAHKIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT-YILLSGASPFLGET  215 (283)
T ss_dssp             CSSSSSCCEEECCCTTCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHH-HHHHHSSCTTCCSS
T ss_pred             cCCCCCCceEEEecccceeccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHH-HHHHHCCCCCCCcc
Confidence            765    799999998876543222  1223578889999999988999999999999999 99999999998754

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.96  E-value=1.6e-30  Score=201.36  Aligned_cols=143  Identities=26%  Similarity=0.392  Sum_probs=118.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++++|.. +..++||||+++|+|.+++...     ..+++..+..++.|++.||.|||   +++++||||||+||+++
T Consensus       433 v~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~  503 (635)
T 4fl3_A          433 VRMIGICEA-ESWMLVMEMAELGPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLV  503 (635)
T ss_dssp             CCEEEEEES-SSEEEEEECCTTEEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEE
T ss_pred             eeEEEEEec-CCEEEEEEccCCCCHHHHHhhC-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEe
Confidence            678998864 5688999999999999999654     45788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcc--eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGET--RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~  153 (159)
                      .+..+||+|||++........  .......++..|+|||.+.+..++.++||||||+++ |+|++ |+.||.+.+.
T Consensus       504 ~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l-~ellt~G~~Pf~~~~~  578 (635)
T 4fl3_A          504 TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLM-WEAFSYGQKPYRGMKG  578 (635)
T ss_dssp             ETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTTCCSSTTCCH
T ss_pred             CCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHH-HHHHhCCCCCCCCCCH
Confidence            999999999999876643321  112223456789999999999999999999999999 99998 9999987653

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.96  E-value=1.2e-29  Score=177.55  Aligned_cols=139  Identities=19%  Similarity=0.305  Sum_probs=117.5

Q ss_pred             CeEEEEEecC--CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCC--eEEecCCCCC
Q 031436            1 MRLIGCCLET--ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRP--IVFRNVKPSN   76 (159)
Q Consensus         1 v~l~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~--~~h~~l~~~n   76 (159)
                      |++++++.+.  +..+++|||+++|+|.+.+.....   ..+++..+..++.|++.|+.|||   +.+  ++|+|++|+|
T Consensus        70 v~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~N  143 (271)
T 3kmu_A           70 LPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTN---FVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRS  143 (271)
T ss_dssp             ECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSS---CCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGG
T ss_pred             hheEEEEccCCCCCeEeeecccCCCcHHHHHhhccc---CCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccce
Confidence            4688998876  788999999999999999976432   35889999999999999999999   888  9999999999


Q ss_pred             EEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCC---CcceEeccccccCcceecccccccCC
Q 031436           77 ILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNE---KCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        77 il~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~---~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      |+++.+..+++.|++++......      ...+++.|+|||.+.+..++.   ++|+||||+++ |++++|+.||.+.+
T Consensus       144 il~~~~~~~~l~~~~~~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il-~el~~g~~p~~~~~  215 (271)
T 3kmu_A          144 VMIDEDMTARISMADVKFSFQSP------GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLL-WELVTREVPFADLS  215 (271)
T ss_dssp             EEECTTSCEEEEGGGSCCTTSCT------TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHH-HHHHHCSCTTTTSC
T ss_pred             EEEcCCcceeEEeccceeeeccc------CccCCccccChhhhccCCCCCCCchhhHHHHHHHH-HHHHhCCCCccccC
Confidence            99999999999988776543222      124688899999998766554   79999999999 99999999997654

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.96  E-value=3.5e-30  Score=184.77  Aligned_cols=149  Identities=21%  Similarity=0.330  Sum_probs=113.4

Q ss_pred             CeEEEEEecCCCc------eEEEEecCCCChHHHhhCCC-CCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCC
Q 031436            1 MRLIGCCLETENP------VLVFEYVEYGTLADRIYHPR-QPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK   73 (159)
Q Consensus         1 v~l~~~~~~~~~~------~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~   73 (159)
                      |++++++......      ++++||+.+|+|.+.+.... ......+++..+..++.|++.|+.|||   +++++|+|||
T Consensus        88 v~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dik  164 (323)
T 3qup_A           88 AKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLA  164 (323)
T ss_dssp             CCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred             ehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCC
Confidence            4677888776554      89999999999999886432 112235888999999999999999999   8999999999


Q ss_pred             CCCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccC
Q 031436           74 PSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSE  151 (159)
Q Consensus        74 ~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~  151 (159)
                      |+||+++.+..+|++|||++........ .......++..|+|||.+.+..++.++|+||||+++ |+|++ |+.||.+.
T Consensus       165 p~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~ell~~g~~p~~~~  243 (323)
T 3qup_A          165 ARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTM-WEIMTRGQTPYAGI  243 (323)
T ss_dssp             GGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTSCCTTTTC
T ss_pred             cceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHH-HHHHhCCCCCcccc
Confidence            9999999999999999999876543322 111223456789999999999999999999999999 99999 99999875


Q ss_pred             CC
Q 031436          152 DW  153 (159)
Q Consensus       152 ~~  153 (159)
                      +.
T Consensus       244 ~~  245 (323)
T 3qup_A          244 EN  245 (323)
T ss_dssp             CG
T ss_pred             Ch
Confidence            43

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.96  E-value=1.5e-29  Score=180.16  Aligned_cols=146  Identities=29%  Similarity=0.456  Sum_probs=123.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..+++|||+++++|.+.+.....  ...+++..+..++.|++.|+.|||   +.+++|+||+|.||+++
T Consensus        93 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili~  167 (307)
T 2nru_A           93 VELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG--TPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLD  167 (307)
T ss_dssp             CCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG--CCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEC
T ss_pred             EEEEEEEecCCceEEEEEecCCCcHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEEc
Confidence            5789999999999999999999999998875321  145788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+..++++|||++........ .......++..|+|||.+.+ .++.++|+||||+++ |+|++|..||...+.
T Consensus       168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il-~~l~~g~~p~~~~~~  239 (307)
T 2nru_A          168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVL-LEIITGLPAVDEHRE  239 (307)
T ss_dssp             TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHH-HHHHHCCCSBCTTBS
T ss_pred             CCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHH-HHHHHCCCCcccCcc
Confidence            999999999998876543222 12233457889999998865 588999999999999 999999999987543

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.96  E-value=2e-30  Score=188.61  Aligned_cols=140  Identities=24%  Similarity=0.386  Sum_probs=120.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCC-CeEEecCCCCCEEe
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR-PIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~-~~~h~~l~~~nil~   79 (159)
                      |++++++.+++..++||||+++++|.+.+...     ..+++..+..++.|++.++.|||   +. +++|+||+|.||++
T Consensus        94 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~  165 (360)
T 3eqc_A           94 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILV  165 (360)
T ss_dssp             CCEEEEEEETTEEEEEECCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEE
T ss_pred             EEEeEEEEECCEEEEEEECCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEE
Confidence            57899999999999999999999999998754     35788889999999999999999   65 89999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           80 QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +.+..++++|||++......   ......++..|+|||.+.+..++.++|+||+|+++ |+|++|+.||...+
T Consensus       166 ~~~~~~kl~Dfg~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~g~~pf~~~~  234 (360)
T 3eqc_A          166 NSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL-VEMAVGRYPIPPPD  234 (360)
T ss_dssp             CTTCCEEECCCCCCHHHHHH---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHH-HHHHHTSCCSSCCC
T ss_pred             CCCCCEEEEECCCCcccccc---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHH-HHHHhCCCCCCCCC
Confidence            99999999999987644221   11234578899999999999999999999999999 99999999998754

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.96  E-value=6.6e-30  Score=198.57  Aligned_cols=143  Identities=20%  Similarity=0.276  Sum_probs=118.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++. ++..++||||+++|+|.+.+...+    ..+++..+..++.|++.|+.|||   +.+++||||||+||+++
T Consensus       454 v~l~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~  525 (656)
T 2j0j_A          454 VKLIGVIT-ENPVWIIMELCTLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVS  525 (656)
T ss_dssp             CCEEEEEC-SSSCEEEEECCTTCBHHHHHHHTT----TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEE
T ss_pred             CeEEEEEe-cCceEEEEEcCCCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEe
Confidence            57889885 467899999999999999987532    35788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .++.+|++|||++...............+++.|+|||.+.+..++.++|+||||+++ |+|++ |..||.+.+
T Consensus       526 ~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il-~ellt~g~~Pf~~~~  597 (656)
T 2j0j_A          526 SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM-WEILMHGVKPFQGVK  597 (656)
T ss_dssp             ETTEEEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTSCCTTTTCC
T ss_pred             CCCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHH-HHHHHcCCCCCCCCC
Confidence            999999999999876644332222233456789999999988999999999999999 99886 999998754

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.96  E-value=6.7e-30  Score=184.05  Aligned_cols=142  Identities=25%  Similarity=0.439  Sum_probs=117.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++||||+.+++|.+.....     ..+++..+..++.|++.|+.+||   +.+++|+||+|.||+++
T Consensus        87 v~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~  158 (331)
T 4aaa_A           87 VNLLEVCKKKKRWYLVFEFVDHTILDDLELFP-----NGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVS  158 (331)
T ss_dssp             CCEEEEEEETTEEEEEEECCSEEHHHHHHHST-----TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEC
T ss_pred             eeEEEEeecCCEEEEEEecCCcchHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEc
Confidence            57899999999999999999988887766543     45888999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||++......... .....++..|+|||.+.+. .++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       159 ~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il-~~l~~g~~pf~~~~  229 (331)
T 4aaa_A          159 QSGVVKLCDFGFARTLAAPGEV-YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLV-TEMFMGEPLFPGDS  229 (331)
T ss_dssp             TTSCEEECCCTTC-------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHH-HHHHHSSCSCCCSS
T ss_pred             CCCcEEEEeCCCceeecCCccc-cCCCcCCccccCcccccCCCCcchHHHHHHHHHHH-HHHHhCCCCCCCCC
Confidence            9999999999998765432221 2234578889999998775 689999999999999 99999999998764

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.96  E-value=3.6e-30  Score=185.39  Aligned_cols=144  Identities=22%  Similarity=0.355  Sum_probs=115.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++++|.++ ..++++|++.+|+|.+.+....    ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        80 v~~~~~~~~~-~~~~v~~~~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~  151 (327)
T 3lzb_A           80 CRLLGICLTS-TVQLITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVK  151 (327)
T ss_dssp             CCCCEEEESS-SEEEEECCCSSCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEE
T ss_pred             eEEEEEEecC-CceEEEEecCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEc
Confidence            4678888764 4789999999999999987643    45888899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcce-eeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETR-IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~  153 (159)
                      .+..+|++|||++......... ......++..|+|||.+.+..++.++|+||+|+++ |+|++ |+.||.+.+.
T Consensus       152 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il-~ell~~g~~p~~~~~~  225 (327)
T 3lzb_A          152 TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV-WELMTFGSKPYDGIPA  225 (327)
T ss_dssp             ETTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTSCCTTTTCCG
T ss_pred             CCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHH-HHHHHCCCCCCCCCCH
Confidence            9999999999998765433221 11223456789999999999999999999999999 99999 9999987654

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.96  E-value=7e-30  Score=187.89  Aligned_cols=140  Identities=21%  Similarity=0.312  Sum_probs=114.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++..++..++|||+ .+++|.+.+...     ..+++..+..++.|++.||.|||   +.+++||||||+||+++
T Consensus       119 v~~~~~~~~~~~~~lv~E~-~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~  189 (390)
T 2zmd_A          119 IRLYDYEITDQYIYMVMEC-GNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV  189 (390)
T ss_dssp             CCEEEEEECSSEEEEEEEC-CSEEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES
T ss_pred             EEEEEEEecCCEEEEEEec-CCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE
Confidence            5788999998999999995 578999998754     35778888899999999999999   89999999999999995


Q ss_pred             CCCceEEEecCCCcccCCCcce-eeeeecccccccCcccccc-----------CCCCCCcceEeccccccCcceeccccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETR-IRGRVMGTFGYLPPEYIAT-----------GDCNEKCDVYSFDGSRDSGHLTGRAWY  148 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~-----------~~~~~~~DvwS~g~~~~~~~~~g~~p~  148 (159)
                       +..+||+|||++......... ......+++.|+|||.+.+           ..++.++||||||+++ |+|++|+.||
T Consensus       190 -~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil-~ell~G~~Pf  267 (390)
T 2zmd_A          190 -DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL-YYMTYGKTPF  267 (390)
T ss_dssp             -SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHH-HHHHHSSCTT
T ss_pred             -CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHH-HHHHHCCCcc
Confidence             467999999998766433221 1234468999999999865           3688999999999999 9999999999


Q ss_pred             ccC
Q 031436          149 RSE  151 (159)
Q Consensus       149 ~~~  151 (159)
                      ...
T Consensus       268 ~~~  270 (390)
T 2zmd_A          268 QQI  270 (390)
T ss_dssp             TTC
T ss_pred             hhh
Confidence            764

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.96  E-value=3.3e-30  Score=181.37  Aligned_cols=144  Identities=28%  Similarity=0.406  Sum_probs=120.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++. ++..+++|||+++++|.+.+.....   ..+++..+..++.|++.|+.+||   +++++|+||+|.||+++
T Consensus        71 ~~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~  143 (279)
T 1qpc_A           71 VRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVS  143 (279)
T ss_dssp             CCEEEEEC-SSSCEEEEECCTTCBHHHHTTSHHH---HTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC
T ss_pred             ceEEEEEc-CCCcEEEEecCCCCCHHHHHhcCCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEc
Confidence            46788876 4668999999999999999864311   25788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..++++|||.+...............++..|+|||.+.+..++.++|+||||+++ ++|++ |+.||.+.+
T Consensus       144 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~el~~~g~~p~~~~~  215 (279)
T 1qpc_A          144 DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL-TEIVTHGRIPYPGMT  215 (279)
T ss_dssp             TTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHH-HHHHTTTCCSSTTCC
T ss_pred             CCCCEEECCCcccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHH-HHHHhCCCCCCcccC
Confidence            999999999999876644332222223456789999999888899999999999999 99999 999997654

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.96  E-value=5.9e-30  Score=179.68  Aligned_cols=144  Identities=25%  Similarity=0.376  Sum_probs=122.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..++++||+++++|.+.+...     ..++...+..++.|++.|+.+||   +++++|+||+|.||+++
T Consensus        68 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~  139 (276)
T 2yex_A           68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLD  139 (276)
T ss_dssp             CCEEEEEEETTEEEEEEECCTTEEGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC
T ss_pred             eeeeeEEEcCCEEEEEEEecCCCcHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEc
Confidence            57889999999999999999999999988643     45888999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCC-CCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDC-NEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~-~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.++++|||.+........ .......++..|+|||.+.+..+ +.++|+||+|+++ ++|++|+.||...+.
T Consensus       140 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il-~~l~~g~~p~~~~~~  213 (276)
T 2yex_A          140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL-TAMLAGELPWDQPSD  213 (276)
T ss_dssp             TTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHH-HHHHHSSCCCSCSCT
T ss_pred             cCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHH-HHHHhCCCCCCCCch
Confidence            999999999998865432221 11233457888999999987765 7789999999999 999999999987543

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.96  E-value=6.4e-30  Score=182.63  Aligned_cols=149  Identities=22%  Similarity=0.376  Sum_probs=123.3

Q ss_pred             CeEEEEEecCC-CceEEEEecCCCChHHHhhCCCCCC-----------CCccchhhHHHHHHHHHHHHHHhhhcCCCCeE
Q 031436            1 MRLIGCCLETE-NPVLVFEYVEYGTLADRIYHPRQPN-----------FEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV   68 (159)
Q Consensus         1 v~l~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~-----------~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~   68 (159)
                      |++++++.+.+ ..+++|||+++++|.+.+.......           ...+++..+..++.|++.|+.|||   +.+++
T Consensus        94 v~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~  170 (316)
T 2xir_A           94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCI  170 (316)
T ss_dssp             CCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCC
T ss_pred             eeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence            57888887654 5899999999999999997643210           123788899999999999999999   89999


Q ss_pred             EecCCCCCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-ccc
Q 031436           69 FRNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRA  146 (159)
Q Consensus        69 h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~  146 (159)
                      |+||+|.||+++.+..+|++|||++........ .......++..|+|||.+.+..++.++|+||+|+++ |+|++ |+.
T Consensus       171 H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~t~g~~  249 (316)
T 2xir_A          171 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL-WEIFSLGAS  249 (316)
T ss_dssp             CSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTSCC
T ss_pred             cccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHH-HHHHhCCCC
Confidence            999999999999999999999999876544332 222334567789999999999999999999999999 99998 999


Q ss_pred             ccccCCC
Q 031436          147 WYRSEDW  153 (159)
Q Consensus       147 p~~~~~~  153 (159)
                      ||.+.+.
T Consensus       250 p~~~~~~  256 (316)
T 2xir_A          250 PYPGVKI  256 (316)
T ss_dssp             SSTTCCC
T ss_pred             CCcccch
Confidence            9987654

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.96  E-value=1.2e-29  Score=180.48  Aligned_cols=141  Identities=24%  Similarity=0.374  Sum_probs=122.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..+++|||+++++|.+.+..      ..++...+..++.|++.|+.+||   +.+++|+||+|.||+++
T Consensus        83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~  153 (303)
T 3a7i_A           83 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEP------GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLS  153 (303)
T ss_dssp             CCEEEEEEETTEEEEEEECCTTEEHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEC
T ss_pred             eEEEEEEecCCeEEEEEEeCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEEC
Confidence            5788999999999999999999999998854      45788999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.++++|||.+........ ......++..|+|||.+.+..++.++|+||||+++ +++++|+.||...+
T Consensus       154 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~g~~p~~~~~  223 (303)
T 3a7i_A          154 EHGEVKLADFGVAGQLTDTQI-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITA-IELARGEPPHSELH  223 (303)
T ss_dssp             TTSCEEECCCTTCEECBTTBC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHH-HHHHHSSCTTTTSC
T ss_pred             CCCCEEEeecccceecCcccc-ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHH-HHHccCCCCCCCcC
Confidence            999999999998876543322 12234578889999999988899999999999999 99999999997643

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=7.1e-30  Score=180.52  Aligned_cols=144  Identities=25%  Similarity=0.417  Sum_probs=121.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++ +.+..+++|||+++++|.+.+...+    ..+++..+..++.|++.|+.+||   +.+++|+||+|+||+++
T Consensus        73 ~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~  144 (287)
T 1u59_A           73 VRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLV  144 (287)
T ss_dssp             CCEEEEE-ESSSEEEEEECCTTEEHHHHHTTCT----TTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEE
T ss_pred             eEEEEEe-cCCCcEEEEEeCCCCCHHHHHHhCC----ccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEc
Confidence            5678888 4567899999999999999886432    45889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCccee--eeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRI--RGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~  153 (159)
                      .+..++++|||++..........  .....++..|+|||.+.+..++.++|+||+|+++ ++|++ |+.||...+.
T Consensus       145 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~ellt~g~~p~~~~~~  219 (287)
T 1u59_A          145 NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTM-WEALSYGQKPYKKMKG  219 (287)
T ss_dssp             ETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHH-HHHHTTSCCTTTTCCT
T ss_pred             CCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHH-HHHHcCCCCCcccCCH
Confidence            99999999999987664433211  1223356789999999888899999999999999 99998 9999987543

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.96  E-value=2.3e-29  Score=177.74  Aligned_cols=139  Identities=30%  Similarity=0.551  Sum_probs=115.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCC--eEEecCCCCCEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRP--IVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~--~~h~~l~~~nil   78 (159)
                      |++++++.+.  .+++|||+++|+|.+.+....    ..+++..+..++.|++.|+.|||   +.+  ++|+||+|+||+
T Consensus        86 ~~~~~~~~~~--~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil  156 (287)
T 4f0f_A           86 VKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIF  156 (287)
T ss_dssp             CCEEEEETTT--TEEEEECCTTCBHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEE
T ss_pred             hhhheeecCC--CeEEEEecCCCCHHHHHhccc----CCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEE
Confidence            4678888654  379999999999999886543    46889999999999999999999   888  999999999999


Q ss_pred             ecCCCc-----eEEEecCCCcccCCCcceeeeeecccccccCccccc--cCCCCCCcceEeccccccCcceecccccccC
Q 031436           79 FQEQSV-----AKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA--TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        79 ~~~~~~-----~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~--~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      ++.+..     +|++|||++......    .....++..|+|||.+.  ...++.++|+||+|+++ |+|++|+.||...
T Consensus       157 ~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l-~~l~~g~~pf~~~  231 (287)
T 4f0f_A          157 LQSLDENAPVCAKVADFGLSQQSVHS----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMIL-YTILTGEGPFDEY  231 (287)
T ss_dssp             ESCCCTTCSCCEEECCCTTCBCCSSC----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHH-HHHHHSSCTTTTC
T ss_pred             EeccCCCCceeEEeCCCCcccccccc----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHH-HHHHcCCCCCccc
Confidence            987665     999999988754332    22346788999999984  45578999999999999 9999999999875


Q ss_pred             CC
Q 031436          152 DW  153 (159)
Q Consensus       152 ~~  153 (159)
                      +.
T Consensus       232 ~~  233 (287)
T 4f0f_A          232 SY  233 (287)
T ss_dssp             CC
T ss_pred             cc
Confidence            43

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.96  E-value=1.9e-30  Score=188.35  Aligned_cols=142  Identities=14%  Similarity=0.164  Sum_probs=119.4

Q ss_pred             EEEEEec-CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecC
Q 031436            3 LIGCCLE-TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQE   81 (159)
Q Consensus         3 l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~   81 (159)
                      +++++.. ++..++||||+ +++|.+++.....   ..+++..+..++.|++.|+.|||   +++++||||+|+||+++.
T Consensus       122 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~---~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl~~~  194 (352)
T 2jii_A          122 CMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPK---HVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIFVDP  194 (352)
T ss_dssp             CCEEEEETTTEEEEEEECC-CEEHHHHHHHSGG---GCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEEEET
T ss_pred             hhhccccCCcEEEEEecCC-CcCHHHHHHhCCc---CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEEcC
Confidence            5667765 67789999999 8999999975421   46889999999999999999999   899999999999999998


Q ss_pred             CC--ceEEEecCCCcccCCCcce------eeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           82 QS--VAKLFDFSYSESIPEGETR------IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        82 ~~--~~~l~d~~~~~~~~~~~~~------~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +.  .++++|||++.........      ......++..|+|||.+.+..++.++|+||||+++ |+|++|+.||....
T Consensus       195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il-~el~~g~~pf~~~~  272 (352)
T 2jii_A          195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCM-LKWLYGFLPWTNCL  272 (352)
T ss_dssp             TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHH-HHHHHSCCTTGGGT
T ss_pred             CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHH-HHHHhCCCCcccCC
Confidence            87  8999999998765432111      11223578899999999998999999999999999 99999999998764

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.96  E-value=1.2e-29  Score=181.28  Aligned_cols=143  Identities=24%  Similarity=0.361  Sum_probs=123.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..+++|||+++++|.+.+....    ..++...+..++.|++.|+.+||   +.+++|+||+|.||+++
T Consensus        87 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~  159 (314)
T 3com_A           87 VKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN----KTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLN  159 (314)
T ss_dssp             CCEEEEEEETTEEEEEEECCTTEEHHHHHHHHT----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEC
T ss_pred             ccEEEEEEeCCEEEEEeecCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEEC
Confidence            578899999999999999999999999886322    45788999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.++++|||.+......... .....++..|+|||.+.+..++.++|+||||+++ |+|++|+.||...+
T Consensus       160 ~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~g~~p~~~~~  229 (314)
T 3com_A          160 TEGHAKLADFGVAGQLTDTMAK-RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITA-IEMAEGKPPYADIH  229 (314)
T ss_dssp             TTCCEEECCCTTCEECBTTBSC-BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHH-HHHHHSSCTTTTSC
T ss_pred             CCCCEEEeecccchhhhhhccc-cCccCCCCCccChhhcCCCCCCccccHHHHHHHH-HHHHhCCCCCCCCC
Confidence            9999999999988765433221 2234578889999999988899999999999999 99999999997654

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.96  E-value=1.4e-29  Score=190.55  Aligned_cols=141  Identities=18%  Similarity=0.230  Sum_probs=119.6

Q ss_pred             EEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe---
Q 031436            3 LIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF---   79 (159)
Q Consensus         3 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~---   79 (159)
                      +..++.++...+++|||+ +++|.+++....    ..+++..+..++.|++.||.|||   +++++||||||+||++   
T Consensus        68 i~~~~~~~~~~~lvme~~-g~sL~~ll~~~~----~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~  139 (483)
T 3sv0_A           68 VRWFGVEGDYNVLVMDLL-GPSLEDLFNFCS----RKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLG  139 (483)
T ss_dssp             EEEEEEETTEEEEEEECC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCG
T ss_pred             EEEEEeeCCEEEEEEECC-CCCHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecC
Confidence            445566777889999999 899999997533    46889999999999999999999   8999999999999999   


Q ss_pred             cCCCceEEEecCCCcccCCCcce------eeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           80 QEQSVAKLFDFSYSESIPEGETR------IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~------~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +.+..+||+|||++.........      ......++..|+|||.+.+..++.++||||||+++ |+|++|+.||.+..
T Consensus       140 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil-~elltG~~Pf~~~~  217 (483)
T 3sv0_A          140 RRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVL-MYFLRGSLPWQGLK  217 (483)
T ss_dssp             GGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHH-HHHHHSSCTTSSCC
T ss_pred             CCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHH-HHHHhCCCCCcccc
Confidence            57788999999998765433221      11245688999999999999999999999999999 99999999998754

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.96  E-value=4.2e-30  Score=186.01  Aligned_cols=140  Identities=21%  Similarity=0.311  Sum_probs=113.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++|||+. +++|.+.+...     ..+++..+..++.|++.|+.|||   +.+++||||||+||+++
T Consensus        72 v~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~  142 (343)
T 3dbq_A           72 IRLYDYEITDQYIYMVMECG-NIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV  142 (343)
T ss_dssp             CCEEEEEECSSEEEEEECCC-SEEHHHHHHHS-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE
T ss_pred             EEEeeeEeeCCEEEEEEeCC-CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE
Confidence            57899999999999999955 78999998764     45788889999999999999999   89999999999999997


Q ss_pred             CCCceEEEecCCCcccCCCcce-eeeeecccccccCcccccc-----------CCCCCCcceEeccccccCcceeccccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETR-IRGRVMGTFGYLPPEYIAT-----------GDCNEKCDVYSFDGSRDSGHLTGRAWY  148 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~-----------~~~~~~~DvwS~g~~~~~~~~~g~~p~  148 (159)
                       +..+|++|||++......... ......+++.|+|||.+.+           ..++.++|+||||+++ |+|++|+.||
T Consensus       143 -~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il-~ell~g~~pf  220 (343)
T 3dbq_A          143 -DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL-YYMTYGKTPF  220 (343)
T ss_dssp             -TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHH-HHHHHSSCTT
T ss_pred             -CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHH-HHHHhCCCcc
Confidence             567999999998766433221 2234568999999999865           5688999999999999 9999999999


Q ss_pred             ccC
Q 031436          149 RSE  151 (159)
Q Consensus       149 ~~~  151 (159)
                      ...
T Consensus       221 ~~~  223 (343)
T 3dbq_A          221 QQI  223 (343)
T ss_dssp             TTC
T ss_pred             hhh
Confidence            763

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.96  E-value=7.5e-30  Score=189.28  Aligned_cols=141  Identities=23%  Similarity=0.347  Sum_probs=111.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.. +..++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus       203 v~l~~~~~~-~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~  273 (419)
T 3i6u_A          203 IKIKNFFDA-EDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLS  273 (419)
T ss_dssp             CCCCEEEES-SEEEEEEECCTTCBGGGGTSSS-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEES
T ss_pred             eeEEEEEec-CceEEEEEcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEe
Confidence            466777754 5679999999999999888654     45889999999999999999999   89999999999999997


Q ss_pred             CC---CceEEEecCCCcccCCCcceeeeeecccccccCcccccc---CCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQ---SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT---GDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~---~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+   ..+|++|||++.......  ......+++.|+|||.+.+   ..++.++|+||+|+++ |+|++|+.||.....
T Consensus       274 ~~~~~~~~kl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il-~~lltg~~pf~~~~~  349 (419)
T 3i6u_A          274 SQEEDCLIKITDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL-FICLSGYPPFSEHRT  349 (419)
T ss_dssp             SSSSSCCEEECCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHH-HHHHHSSCSSCCCSS
T ss_pred             cCCCcceEEEeecccceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHH-HHHHHCCCCCCCCcc
Confidence            54   359999999987664322  2233568899999999853   5678899999999999 999999999987543

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.96  E-value=1.1e-29  Score=185.56  Aligned_cols=138  Identities=22%  Similarity=0.321  Sum_probs=110.1

Q ss_pred             CeEEEEEecCC------CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCLETE------NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~~~------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      |++++++...+      ..++||||+. ++|.+.+.       ..++...+..++.|++.|+.|||   +++++||||||
T Consensus        87 v~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp  155 (371)
T 2xrw_A           87 IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQ-------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP  155 (371)
T ss_dssp             CCEEEEECSCCSTTTCCEEEEEEECCS-EEHHHHHH-------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             cceEEeeccccccccccceEEEEEcCC-CCHHHHHh-------hccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCH
Confidence            56788887654      5799999996 58888875       23678888999999999999999   89999999999


Q ss_pred             CCEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           75 SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        75 ~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +||+++.+..+|++|||++.......  ......++..|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       156 ~NIl~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~el~~g~~pf~~~~  230 (371)
T 2xrw_A          156 SNIVVKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM-GEMIKGGVLFPGTD  230 (371)
T ss_dssp             GGEEECTTSCEEECCCCC------------------CTTCCHHHHTTCCCCTTHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             HHEEEcCCCCEEEEEeeccccccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHH-HHHHhCCCCCCCCC
Confidence            99999999999999999987654322  12234678899999999999999999999999999 99999999998765

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.96  E-value=7.4e-30  Score=187.26  Aligned_cols=140  Identities=20%  Similarity=0.260  Sum_probs=116.8

Q ss_pred             CeEEEEEe----cCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCC-CeEEecCCCC
Q 031436            1 MRLIGCCL----ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR-PIVFRNVKPS   75 (159)
Q Consensus         1 v~l~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~-~~~h~~l~~~   75 (159)
                      |++++++.    ++...++||||+ ++++.+.+.....   ..+++..+..++.|++.||.|||   ++ +++||||||.
T Consensus       104 v~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~  176 (397)
T 1wak_A          104 VQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNY---QGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPE  176 (397)
T ss_dssp             CCEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGG
T ss_pred             eeeecceeecCCCCceEEEEEecc-CccHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHH
Confidence            46778776    556789999999 5677777654322   45889999999999999999999   77 9999999999


Q ss_pred             CEEecCCC-------------------------------------------------ceEEEecCCCcccCCCcceeeee
Q 031436           76 NILFQEQS-------------------------------------------------VAKLFDFSYSESIPEGETRIRGR  106 (159)
Q Consensus        76 nil~~~~~-------------------------------------------------~~~l~d~~~~~~~~~~~~~~~~~  106 (159)
                      ||+++.+.                                                 .+|++|||.+.......    ..
T Consensus       177 NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~----~~  252 (397)
T 1wak_A          177 NILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF----TE  252 (397)
T ss_dssp             GEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS----CS
T ss_pred             HeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC----cc
Confidence            99998664                                                 79999999887654322    22


Q ss_pred             ecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436          107 VMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus       107 ~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ..++..|+|||.+.+..++.++|+||||+++ |+|++|+.||.+.+
T Consensus       253 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~elltg~~pf~~~~  297 (397)
T 1wak_A          253 DIQTRQYRSLEVLIGSGYNTPADIWSTACMA-FELATGDYLFEPHS  297 (397)
T ss_dssp             CCSCGGGCCHHHHHTSCCCTHHHHHHHHHHH-HHHHHSSCSCCCCC
T ss_pred             CCCCCcccCChhhcCCCCCcHHHHHHHHHHH-HHHhhCCCCCCCCc
Confidence            3578899999999999999999999999999 99999999998654

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=1.3e-29  Score=185.04  Aligned_cols=138  Identities=21%  Similarity=0.340  Sum_probs=117.7

Q ss_pred             CeEEEEEecCC------CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCLETE------NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~~~------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      |++++++...+      ..++||||+ +++|.+.+..      ..++...+..++.|++.|+.|||   +.+++||||||
T Consensus        87 v~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp  156 (367)
T 1cm8_A           87 IGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKH------EKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKP  156 (367)
T ss_dssp             CCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             CCceeeEecCCccccCceEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCH
Confidence            45677776653      459999999 7899998865      34788889999999999999999   89999999999


Q ss_pred             CCEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCCC
Q 031436           75 SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        75 ~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .||+++.+..+|++|||++.......    ....++..|+|||.+.+ ..++.++|+||+||++ ++|++|+.||.+.+.
T Consensus       157 ~NIll~~~~~~kl~Dfg~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il-~ell~g~~pf~~~~~  231 (367)
T 1cm8_A          157 GNLAVNEDCELKILDFGLARQADSEM----TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIM-AEMITGKTLFKGSDH  231 (367)
T ss_dssp             GGEEECTTCCEEECCCTTCEECCSSC----CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHH-HHHHHSSCSSCCSSH
T ss_pred             HHEEEcCCCCEEEEeeeccccccccc----CcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHH-HHHHhCCCCCCCCCH
Confidence            99999999999999999987654321    22457888999999877 6799999999999999 999999999987653

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.96  E-value=5.7e-30  Score=181.95  Aligned_cols=142  Identities=23%  Similarity=0.371  Sum_probs=119.7

Q ss_pred             CeEEEEEecC--CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLET--ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      +++++++.+.  +..+++|||+++++|.+.+....    ..+++..+..++.|++.|+.+||   +++++|+||+|.||+
T Consensus        86 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil  158 (302)
T 4e5w_A           86 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVL  158 (302)
T ss_dssp             CCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEE
T ss_pred             eeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEE
Confidence            5688888876  66899999999999999986432    45788999999999999999999   899999999999999


Q ss_pred             ecCCCceEEEecCCCcccCCCcc--eeeeeecccccccCccccccCCCCCCcceEeccccccCcceeccccccc
Q 031436           79 FQEQSVAKLFDFSYSESIPEGET--RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        79 ~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      ++.+..++++|||++........  .......++..|+|||.+.+..++.++|+||+|+++ |+|++|..|+..
T Consensus       159 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~g~~p~~~  231 (302)
T 4e5w_A          159 VESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTL-HELLTYCDSDSS  231 (302)
T ss_dssp             EEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHH-HHHHTTTCGGGS
T ss_pred             EcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHH-HHHHHccCCCcc
Confidence            99999999999999876654332  112234567779999999988899999999999999 999999988643

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.95  E-value=2.1e-29  Score=182.74  Aligned_cols=143  Identities=22%  Similarity=0.320  Sum_probs=117.3

Q ss_pred             CeEEEEEec--------CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecC
Q 031436            1 MRLIGCCLE--------TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNV   72 (159)
Q Consensus         1 v~l~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l   72 (159)
                      |++++++..        ++..++||||+. +++.+.+....    ..+++..+..++.|++.|+.|||   +++++||||
T Consensus        79 v~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dl  150 (351)
T 3mi9_A           79 VNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNVL----VKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDM  150 (351)
T ss_dssp             CCEEEEEEEC--------CEEEEEEECCS-EEHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCC
T ss_pred             ccHhheeeccccccccCCceEEEEEeccC-CCHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCC
Confidence            467788776        346789999996 58888776543    45889999999999999999999   899999999


Q ss_pred             CCCCEEecCCCceEEEecCCCcccCCCc---ceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceeccccc
Q 031436           73 KPSNILFQEQSVAKLFDFSYSESIPEGE---TRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWY  148 (159)
Q Consensus        73 ~~~nil~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~  148 (159)
                      ||+||+++.+..+|++|||++.......   ........++..|+|||.+.+ ..++.++|+||+|+++ ++|++|+.||
T Consensus       151 kp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il-~ell~g~~pf  229 (351)
T 3mi9_A          151 KAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM-AEMWTRSPIM  229 (351)
T ss_dssp             SGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHH-HHHHHSSCSC
T ss_pred             CHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHH-HHHHhCCCCC
Confidence            9999999999999999999987654221   111123456888999999876 4589999999999999 9999999999


Q ss_pred             ccCC
Q 031436          149 RSED  152 (159)
Q Consensus       149 ~~~~  152 (159)
                      .+.+
T Consensus       230 ~~~~  233 (351)
T 3mi9_A          230 QGNT  233 (351)
T ss_dssp             CCSS
T ss_pred             CCCC
Confidence            8754

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.4e-29  Score=183.45  Aligned_cols=142  Identities=23%  Similarity=0.279  Sum_probs=120.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+.+..+++|||+.+ +|.+.+....    ..+++..+..++.|++.|+.|||   +++++|+||+|+||+++
T Consensus        75 v~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~  146 (346)
T 1ua2_A           75 IGLLDAFGHKSNISLVFDFMET-DLEVIIKDNS----LVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLD  146 (346)
T ss_dssp             CCEEEEECCTTCCEEEEECCSE-EHHHHHTTCC----SSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEC
T ss_pred             CeEEEEEeeCCceEEEEEcCCC-CHHHHHHhcC----cCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEc
Confidence            5789999999999999999975 8988886532    45788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+|++|||++......... .....++..|+|||.+.+. .++.++|+||+|+++ |+|++|.+||.+.+
T Consensus       147 ~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il-~ell~g~~~~~~~~  217 (346)
T 1ua2_A          147 ENGVLKLADFGLAKSFGSPNRA-YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCIL-AELLLRVPFLPGDS  217 (346)
T ss_dssp             TTCCEEECCCGGGSTTTSCCCC-CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             CCCCEEEEecccceeccCCccc-CCcccccccccCchHhhCCCCCCchhhhHhHHHHH-HHHHHCCCCCCCCC
Confidence            9999999999998765432221 2234578899999998764 478999999999999 99999999997754

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.95  E-value=8.2e-30  Score=181.52  Aligned_cols=140  Identities=28%  Similarity=0.350  Sum_probs=120.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe-
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF-   79 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~-   79 (159)
                      +++++++.+++..+++|||+++++|.+.+...     ..+++..+..++.|++.|+.|||   +.+++|+||+|+||++ 
T Consensus        69 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~  140 (304)
T 2jam_A           69 VTLEDIYESTTHYYLVMQLVSGGELFDRILER-----GVYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYL  140 (304)
T ss_dssp             CCEEEEEECSSEEEEEECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEES
T ss_pred             eehhhhcccCCEEEEEEEcCCCccHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEe
Confidence            57889999999999999999999999988653     45788899999999999999999   8999999999999999 


Q ss_pred             --cCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           80 --QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        80 --~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                        +.+..++++|||++.......   .....++..|+|||.+.+..++.++|+||+|+++ |+|++|+.||...+
T Consensus       141 ~~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~g~~pf~~~~  211 (304)
T 2jam_A          141 TPEENSKIMITDFGLSKMEQNGI---MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIT-YILLCGYPPFYEET  211 (304)
T ss_dssp             SSSTTCCEEBCSCSTTCCCCCBT---THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHH-HHHHHSSCTTTTSC
T ss_pred             cCCCCCCEEEccCCcceecCCCc---cccccCCCCccChHHhccCCCCchhhHHHHHHHH-HHHHHCCCCCCCCC
Confidence              667889999999876543221   1223578899999999998999999999999999 99999999997653

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.95  E-value=5e-30  Score=181.28  Aligned_cols=144  Identities=27%  Similarity=0.406  Sum_probs=116.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+.+..++||||+++|+|.+.+..... ....+++..+..++.|++.|+.|||   +++++|+||+|.||+++
T Consensus        83 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~  158 (285)
T 3is5_A           83 IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQA-RGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQ  158 (285)
T ss_dssp             CCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEES
T ss_pred             HhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhh-cccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEe
Confidence            5789999999999999999999999998754211 1145888999999999999999999   89999999999999994


Q ss_pred             ---CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 ---EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ---~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                         .+..++++|||++........  .....++..|+|||.+. ..++.++|+||+|+++ ++|++|+.||.+.+
T Consensus       159 ~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il-~~ll~g~~pf~~~~  229 (285)
T 3is5_A          159 DTSPHSPIKIIDFGLAELFKSDEH--STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVM-YFLLTGCLPFTGTS  229 (285)
T ss_dssp             SSSTTCCEEECCCCCCCC------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             cCCCCCCEEEEeeecceecCCccc--CcCcccccCcCChHHhc-cCCCcccCeehHHHHH-HHHHhCCCCCCCCC
Confidence               456799999999876543222  22345788999999875 5689999999999999 99999999998764

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.95  E-value=9.3e-30  Score=180.13  Aligned_cols=143  Identities=22%  Similarity=0.367  Sum_probs=109.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++ ..+..+++|||+++++|.+.+....    ..+++..+..++.|++.|+.|||   +.+++|+||+|.||+++
T Consensus        83 v~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~  154 (289)
T 3og7_A           83 LLFMGYS-TAPQLAIVTQWCEGSSLYHHLHASE----TKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLH  154 (289)
T ss_dssp             CCEEEEE-CSSSCEEEEECCCEEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEE
T ss_pred             EEEEeec-cCCccEEEEEecCCCcHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEEC
Confidence            4567754 4567899999999999999886432    46888899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCc-ceeeeeecccccccCccccc---cCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYLPPEYIA---TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~ape~~~---~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||++....... ........++..|+|||.+.   +..++.++|+||+|+++ +++++|+.||...+
T Consensus       155 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il-~el~~g~~p~~~~~  229 (289)
T 3og7_A          155 EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVL-YELMTGQLPYSNIN  229 (289)
T ss_dssp             TTTEEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHH-HHHHHSSCTTSSCC
T ss_pred             CCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHH-HHHHHCCCCccccc
Confidence            99999999999886543321 11223345788999999986   56688899999999999 99999999998754

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.95  E-value=9.6e-30  Score=182.31  Aligned_cols=148  Identities=25%  Similarity=0.372  Sum_probs=122.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCC-----CCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS   75 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~   75 (159)
                      +++++++.+++..+++|||+++|+|.+.+...+     ......++...+..++.|++.|+.+||   +++++|+||+|.
T Consensus        91 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~  167 (322)
T 1p4o_A           91 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAAR  167 (322)
T ss_dssp             CCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGG
T ss_pred             eeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccc
Confidence            578999999999999999999999999886421     011134678889999999999999999   899999999999


Q ss_pred             CEEecCCCceEEEecCCCcccCCCcce-eeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           76 NILFQEQSVAKLFDFSYSESIPEGETR-IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        76 nil~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      ||+++.++.+|++|||++......... ......++..|+|||.+.+..++.++|+||+|+++ |+|++ |+.||.+.+
T Consensus       168 NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~el~~~g~~p~~~~~  245 (322)
T 1p4o_A          168 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL-WEIATLAEQPYQGLS  245 (322)
T ss_dssp             GEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHH-HHHHHTSCCTTTTSC
T ss_pred             eEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHH-HHHHhcCCCccccCC
Confidence            999999999999999988755332211 11223456789999999988899999999999999 99999 899997754

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.95  E-value=5.8e-30  Score=184.33  Aligned_cols=141  Identities=21%  Similarity=0.338  Sum_probs=114.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++||||+. |+|.+.+...     ..+++..+..++.|++.|+.|||   +++++|+||||+||+++
T Consensus        96 v~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~  166 (329)
T 3gbz_A           96 IELKSVIHHNHRLHLIFEYAE-NDLKKYMDKN-----PDVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLS  166 (329)
T ss_dssp             CCEEEEEEETTEEEEEEECCS-EEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEE
T ss_pred             ceEEEEEecCCEEEEEEecCC-CCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEe
Confidence            578999999999999999997 5999988754     35788999999999999999999   89999999999999994


Q ss_pred             -----CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCC
Q 031436           81 -----EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 -----~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                           ....+|++|||++......... .....++..|+|||.+.+. .++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       167 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il-~ell~g~~pf~~~~  242 (329)
T 3gbz_A          167 VSDASETPVLKIGDFGLARAFGIPIRQ-FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIW-AEMLMKTPLFPGDS  242 (329)
T ss_dssp             C-----CCEEEECCTTHHHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             cCCCCccceEEECcCCCccccCCcccc-cCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHH-HHHHHCCCCcCCCC
Confidence                 4456999999988765432221 2233568899999999875 489999999999999 99999999997654

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.95  E-value=8.3e-30  Score=180.48  Aligned_cols=142  Identities=27%  Similarity=0.410  Sum_probs=119.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++ +.+..+++|||+++++|.+.+...     ..++...+..++.|++.|+.+||   +.+++|+||+|.||+++
T Consensus        81 ~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~  151 (291)
T 1xbb_A           81 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLV  151 (291)
T ss_dssp             CCEEEEE-ESSSEEEEEECCTTEEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEE
T ss_pred             EEEEEEE-CCCCcEEEEEeCCCCCHHHHHHhC-----cCCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEe
Confidence            5678888 567889999999999999998754     35788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCccee--eeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRI--RGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..++++|||++..........  .....++..|+|||.+.+..++.++|+||||+++ |+|++ |+.||.+.+
T Consensus       152 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~~g~~p~~~~~  225 (291)
T 1xbb_A          152 TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLM-WEAFSYGQKPYRGMK  225 (291)
T ss_dssp             ETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHH-HHHHTTTCCSSTTCC
T ss_pred             CCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHH-HHHHhcCCCCCCCCC
Confidence            99999999999987664433221  1222345779999999888899999999999999 99999 999998754

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.95  E-value=1.6e-29  Score=179.35  Aligned_cols=145  Identities=23%  Similarity=0.372  Sum_probs=119.0

Q ss_pred             CeEEEEEe-cCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe
Q 031436            1 MRLIGCCL-ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~   79 (159)
                      |+++++|. .++..+++|||+++|+|.+.+....    ..++...+..++.|++.|+.+||   +++++|+||+|+||++
T Consensus        89 v~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~  161 (298)
T 3f66_A           89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCML  161 (298)
T ss_dssp             CCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTT----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred             eeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEE
Confidence            46778765 4567899999999999999997532    45788889999999999999999   8999999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcce---eeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCC
Q 031436           80 QEQSVAKLFDFSYSESIPEGETR---IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDW  153 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~  153 (159)
                      +.+..+|++|||++.........   ......++..|+|||.+.+..++.++|+||+|+++ +++++ +.+||...+.
T Consensus       162 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~~~~~~~~~~~~  238 (298)
T 3f66_A          162 DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL-WELMTRGAPPYPDVNT  238 (298)
T ss_dssp             CTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTSCCSSTTSCT
T ss_pred             CCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHH-HHHHhCCCCCCccCCH
Confidence            99999999999998765432211   11233456789999999999999999999999999 99999 6788876554

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.95  E-value=9.8e-30  Score=187.32  Aligned_cols=144  Identities=24%  Similarity=0.324  Sum_probs=114.8

Q ss_pred             CeEEEEEecCCC------ceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCLETEN------PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~~~~------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      |+++++|...+.      .++||||+++ ++.+.+..... ....+++..+..++.|++.|+.|||   +++++||||||
T Consensus        95 v~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp  169 (394)
T 4e7w_A           95 VDLKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAK-LKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKP  169 (394)
T ss_dssp             CCEEEEEEEESSSSSCEEEEEEEECCSE-EHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             ceEEEEEEecCCCCCceEEEEEeeccCc-cHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCH
Confidence            567888865433      7899999975 55554432110 1156888899999999999999999   89999999999


Q ss_pred             CCEEec-CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCC
Q 031436           75 SNILFQ-EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        75 ~nil~~-~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +||+++ .+..+|++|||++.........  ....++..|+|||.+.+. .++.++|+||+||++ |+|++|+.||.+.+
T Consensus       170 ~Nill~~~~~~~kL~DFG~a~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il-~ell~g~~pf~~~~  246 (394)
T 4e7w_A          170 QNLLLDPPSGVLKLIDFGSAKILIAGEPN--VSYICSRYYRAPELIFGATNYTTNIDIWSTGCVM-AELMQGQPLFPGES  246 (394)
T ss_dssp             GGEEEETTTTEEEECCCTTCEECCTTCCC--CSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             HHEEEcCCCCcEEEeeCCCcccccCCCCC--cccccCcCccCHHHHcCCCCCCcHHHHHHHHHHH-HHHHhCCCCCCCCC
Confidence            999998 7889999999998765433221  234578899999998765 589999999999999 99999999998865

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.95  E-value=1e-29  Score=180.42  Aligned_cols=144  Identities=21%  Similarity=0.338  Sum_probs=115.4

Q ss_pred             CeEEEEEec----CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcC-----CCCeEEec
Q 031436            1 MRLIGCCLE----TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF-----SRPIVFRN   71 (159)
Q Consensus         1 v~l~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~-----~~~~~h~~   71 (159)
                      |++++++..    ....+++|||+++|+|.+++..      ..+++..+..++.|++.|+.|||+..     +.+++|||
T Consensus        65 v~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~D  138 (301)
T 3q4u_A           65 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRD  138 (301)
T ss_dssp             CCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTT------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSC
T ss_pred             eeEEEeeccccCCCceeEEehhhccCCCHHHHHhh------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCC
Confidence            467777654    2457899999999999999953      45888999999999999999999321     36899999


Q ss_pred             CCCCCEEecCCCceEEEecCCCcccCCCccee---eeeecccccccCccccccC------CCCCCcceEeccccccCcce
Q 031436           72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRI---RGRVMGTFGYLPPEYIATG------DCNEKCDVYSFDGSRDSGHL  142 (159)
Q Consensus        72 l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~---~~~~~~~~~~~ape~~~~~------~~~~~~DvwS~g~~~~~~~~  142 (159)
                      |||+||+++.+..+|++|||++..........   .....++..|+|||.+.+.      .++.++|+||||+++ |+|+
T Consensus       139 lkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il-~el~  217 (301)
T 3q4u_A          139 LKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVL-WEVA  217 (301)
T ss_dssp             CCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHH-HHHH
T ss_pred             CChHhEEEcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHH-HHHH
Confidence            99999999999999999999986554332221   1233678899999999876      445789999999999 9999


Q ss_pred             ec----------ccccccC
Q 031436          143 TG----------RAWYRSE  151 (159)
Q Consensus       143 ~g----------~~p~~~~  151 (159)
                      +|          +.||...
T Consensus       218 tg~~~~~~~~~~~~pf~~~  236 (301)
T 3q4u_A          218 RRMVSNGIVEDYKPPFYDV  236 (301)
T ss_dssp             TTBCBTTBCCCCCCTTTTT
T ss_pred             hhhcCcccccccccccccc
Confidence            99          7777553

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.95  E-value=5.8e-30  Score=184.41  Aligned_cols=127  Identities=20%  Similarity=0.319  Sum_probs=104.8

Q ss_pred             CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCC---------CeEEecCCCCCEEecCC
Q 031436           12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR---------PIVFRNVKPSNILFQEQ   82 (159)
Q Consensus        12 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~---------~~~h~~l~~~nil~~~~   82 (159)
                      ..++||||+++|+|.+++...      ..++.....++.|++.|+.|||   +.         +++||||||+||+++.+
T Consensus        86 ~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~  156 (336)
T 3g2f_A           86 EYLLVMEYYPNGSLXKYLSLH------TSDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKND  156 (336)
T ss_dssp             EEEEEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTT
T ss_pred             eEEEEEecCCCCcHHHHHhhc------ccchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCC
Confidence            568999999999999999653      3477788899999999999999   78         99999999999999999


Q ss_pred             CceEEEecCCCcccCCCcc-------eeeeeecccccccCcccccc-------CCCCCCcceEeccccccCcceeccccc
Q 031436           83 SVAKLFDFSYSESIPEGET-------RIRGRVMGTFGYLPPEYIAT-------GDCNEKCDVYSFDGSRDSGHLTGRAWY  148 (159)
Q Consensus        83 ~~~~l~d~~~~~~~~~~~~-------~~~~~~~~~~~~~ape~~~~-------~~~~~~~DvwS~g~~~~~~~~~g~~p~  148 (159)
                      ..+||+|||++........       .......++..|+|||.+.+       ..++.++|+||||+++ |+|++|..||
T Consensus       157 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il-~ell~g~~p~  235 (336)
T 3g2f_A          157 GTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIY-WEIFMRCTDL  235 (336)
T ss_dssp             SCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHH-HHHHTTBGGG
T ss_pred             CcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHH-HHHHhcCCcC
Confidence            9999999999876543211       11123457889999999876       3456789999999999 9999996555

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.95  E-value=2.6e-29  Score=179.39  Aligned_cols=142  Identities=26%  Similarity=0.449  Sum_probs=111.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.  +..++||||+++|+|.+.+.....  ...++...+..++.|++.|+.|||+...++++|+||+|+||+++
T Consensus        64 v~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~  139 (307)
T 2eva_A           64 VKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEP--LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLV  139 (307)
T ss_dssp             CCEEEBCT--TTTEEEEECCTTCBHHHHHHCSSS--EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEE
T ss_pred             CeEEEEEc--CCcEEEEEcCCCCCHHHHHhccCC--CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEe
Confidence            46778776  458999999999999999976431  13467788889999999999999921118899999999999998


Q ss_pred             CCCc-eEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           81 EQSV-AKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~~~~-~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .+.. +|++|||++.......    ....++..|+|||.+.+..++.++|+||||+++ |+|++|+.||...
T Consensus       140 ~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il-~el~~g~~p~~~~  206 (307)
T 2eva_A          140 AGGTVLKICDFGTACDIQTHM----TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIIL-WEVITRRKPFDEI  206 (307)
T ss_dssp             TTTTEEEECCCCC----------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHH-HHHHHTCCTTTTT
T ss_pred             CCCCEEEEccccccccccccc----ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHH-HHHHHCCCCchhh
Confidence            7765 7999999886543221    123578899999999998999999999999999 9999999999754

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.95  E-value=2.6e-29  Score=180.28  Aligned_cols=142  Identities=23%  Similarity=0.354  Sum_probs=120.3

Q ss_pred             CeEEEEEe-----cCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC
Q 031436            1 MRLIGCCL-----ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS   75 (159)
Q Consensus         1 v~l~~~~~-----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~   75 (159)
                      ++++++|.     .....++++||+. |+|.+.+.....   ..+++..+..++.|++.|+.|||   +.+++|+||+|.
T Consensus        77 ~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~  149 (326)
T 1blx_A           77 VRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPE---PGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQ  149 (326)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEEECCS-CBHHHHHHHSCT---TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGG
T ss_pred             EeeeeeeeecccCCCceEEEEEecCC-CCHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHH
Confidence            46788886     4567899999997 699998876432   45788999999999999999999   899999999999


Q ss_pred             CEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           76 NILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        76 nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ||+++.++.++++|||++.......  ......++..|+|||.+.+..++.++|+||||+++ |+|++|+.||.+.+
T Consensus       150 Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~g~~pf~~~~  223 (326)
T 1blx_A          150 NILVTSSGQIKLADFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIF-AEMFRRKPLFRGSS  223 (326)
T ss_dssp             GEEECTTCCEEECSCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHH-HHHHHSSCSCCCSS
T ss_pred             HeEEcCCCCEEEecCcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHH-HHHHcCCCCCCCCC
Confidence            9999999999999999887654322  12234578899999999988999999999999999 99999999998654

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.95  E-value=1.7e-29  Score=181.35  Aligned_cols=144  Identities=24%  Similarity=0.346  Sum_probs=113.9

Q ss_pred             CeEEEEEec------CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCLE------TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      +++++++..      ++..+++|||+++++|.+.+.....   ..++...+..++.|++.|+.|||   +.+++|+||+|
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp  157 (326)
T 2x7f_A           84 ATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG---NTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKG  157 (326)
T ss_dssp             CCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGG---GCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSG
T ss_pred             eeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcH
Confidence            467888876      4578999999999999999875432   45788889999999999999999   89999999999


Q ss_pred             CCEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccc-----cCCCCCCcceEeccccccCcceecccccc
Q 031436           75 SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA-----TGDCNEKCDVYSFDGSRDSGHLTGRAWYR  149 (159)
Q Consensus        75 ~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~-----~~~~~~~~DvwS~g~~~~~~~~~g~~p~~  149 (159)
                      .||+++.+..++++|||++........ ......++..|+|||.+.     +..++.++|+||||+++ |+|++|+.||.
T Consensus       158 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il-~~l~~g~~p~~  235 (326)
T 2x7f_A          158 QNVLLTENAEVKLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITA-IEMAEGAPPLC  235 (326)
T ss_dssp             GGEEECTTCCEEECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHH-HHHHHSSCTTT
T ss_pred             HHEEEcCCCCEEEeeCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHH-HHHHhCCCCCC
Confidence            999999999999999998876543221 122345788999999986     45689999999999999 99999999997


Q ss_pred             cCC
Q 031436          150 SED  152 (159)
Q Consensus       150 ~~~  152 (159)
                      ..+
T Consensus       236 ~~~  238 (326)
T 2x7f_A          236 DMH  238 (326)
T ss_dssp             TSC
T ss_pred             CCc
Confidence            654

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.95  E-value=2e-30  Score=189.88  Aligned_cols=131  Identities=13%  Similarity=0.085  Sum_probs=105.5

Q ss_pred             ceEEEEecCCCChHHHhhCCCCC--CCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEec
Q 031436           13 PVLVFEYVEYGTLADRIYHPRQP--NFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF   90 (159)
Q Consensus        13 ~~lv~e~~~~g~L~~~l~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~   90 (159)
                      .+++|||+ +|+|.+.+......  ....+++..+..++.|++.||.|||   +++++||||||+||+++.++.+|++||
T Consensus       175 ~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DF  250 (377)
T 3byv_A          175 RFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGF  250 (377)
T ss_dssp             EEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCG
T ss_pred             EEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEec
Confidence            78999999 68999988753211  1133445778889999999999999   899999999999999999999999999


Q ss_pred             CCCcccCCCcceeeeeecccccccCccccccC-----------CCCCCcceEeccccccCcceecccccccCCC
Q 031436           91 SYSESIPEGETRIRGRVMGTFGYLPPEYIATG-----------DCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-----------~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      |++.....    ......+ ..|+|||.+.+.           .++.++|+||||+++ |+|++|+.||.+.+.
T Consensus       251 G~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il-~elltg~~Pf~~~~~  318 (377)
T 3byv_A          251 EHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI-YWIWCADLPITKDAA  318 (377)
T ss_dssp             GGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH-HHHHHSSCCC-----
T ss_pred             hhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHH-HHHHHCCCCCccccc
Confidence            99875432    1223456 889999999887           899999999999999 999999999987654

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.95  E-value=5.3e-29  Score=176.20  Aligned_cols=138  Identities=23%  Similarity=0.300  Sum_probs=115.9

Q ss_pred             CeEEEEEec----CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCC--eEEecCCC
Q 031436            1 MRLIGCCLE----TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRP--IVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~--~~h~~l~~   74 (159)
                      |++++++..    ++..++||||+++++|.+.+...     ..++...+..++.|++.|+.|||   +.+  ++|+||+|
T Consensus        88 v~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp  159 (290)
T 1t4h_A           88 VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKC  159 (290)
T ss_dssp             CCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCG
T ss_pred             eeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCH
Confidence            467777764    34578999999999999998754     45788889999999999999999   888  99999999


Q ss_pred             CCEEec-CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           75 SNILFQ-EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        75 ~nil~~-~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      .||+++ .+..++++|||++........   ....++..|+|||.+.+ .++.++|+||+|+++ ++|++|+.||...
T Consensus       160 ~Nil~~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l-~~l~~g~~pf~~~  232 (290)
T 1t4h_A          160 DNIFITGPTGSVKIGDLGLATLKRASFA---KAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCM-LEMATSEYPYSEC  232 (290)
T ss_dssp             GGEEESSTTSCEEECCTTGGGGCCTTSB---EESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHH-HHHHHSSCTTTTC
T ss_pred             HHEEEECCCCCEEEeeCCCccccccccc---ccccCCcCcCCHHHHhc-cCCCcchHHHHHHHH-HHHHhCCCCCCCc
Confidence            999997 678999999998865433322   23457889999998864 589999999999999 9999999999764

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.95  E-value=2.6e-30  Score=188.92  Aligned_cols=126  Identities=12%  Similarity=0.009  Sum_probs=105.4

Q ss_pred             ceEEEEecCCCChHHHhhCCCCCCCCccchhhH------HHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceE
Q 031436           13 PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLR------LKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAK   86 (159)
Q Consensus        13 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~------~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~   86 (159)
                      .++||||++ |+|.+++....    ..+.....      ..++.|++.|+.|||   +++++||||||+||+++.++.+|
T Consensus       163 ~~lv~e~~~-~~L~~~l~~~~----~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~k  234 (371)
T 3q60_A          163 YLLLMPAAS-VDLELLFSTLD----FVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLVHGHFTPDNLFIMPDGRLM  234 (371)
T ss_dssp             EEEEECCCS-EEHHHHHHHHH----HSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEEETTCSGGGEEECTTSCEE
T ss_pred             EEEEecCCC-CCHHHHHHHhc----cccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCccCcCCHHHEEECCCCCEE
Confidence            799999998 89999987532    12333334      566799999999999   89999999999999999999999


Q ss_pred             EEecCCCcccCCCcceeeeeecccccccCcccccc--CCCCCCcceEeccccccCcceecccccccC
Q 031436           87 LFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT--GDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        87 l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~--~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      |+|||++.......    ....++..|+|||.+.+  ..++.++|+||||+++ |+|++|+.||.+.
T Consensus       235 L~DFG~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il-~elltg~~Pf~~~  296 (371)
T 3q60_A          235 LGDVSALWKVGTRG----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSI-YRVWCLFLPFGLV  296 (371)
T ss_dssp             ECCGGGEEETTCEE----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHH-HHHHHSSCSTTBC
T ss_pred             EEecceeeecCCCc----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHH-HHHHhCCCCCCCc
Confidence            99999987653321    12346688999999987  6799999999999999 9999999999876

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.95  E-value=3.8e-29  Score=186.13  Aligned_cols=138  Identities=20%  Similarity=0.270  Sum_probs=111.1

Q ss_pred             CeEEEEEecC-----CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC
Q 031436            1 MRLIGCCLET-----ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS   75 (159)
Q Consensus         1 v~l~~~~~~~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~   75 (159)
                      |++++++...     +..++||||+. ++|.+.+...     ..+++..+..++.|++.|+.|||   +.+++||||||.
T Consensus        88 v~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~  158 (432)
T 3n9x_A           88 IRLYDLIIPDDLLKFDELYIVLEIAD-SDLKKLFKTP-----IFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPA  158 (432)
T ss_dssp             CCEEEECCCSCTTTCCCEEEEEECCS-EEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGG
T ss_pred             ceEEEEEecCCCCcCCeEEEEEecCC-cCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHH
Confidence            5678888765     56899999995 6999998754     45889999999999999999999   899999999999


Q ss_pred             CEEecCCCceEEEecCCCcccCCCcc---------------------eeeeeecccccccCcccc-ccCCCCCCcceEec
Q 031436           76 NILFQEQSVAKLFDFSYSESIPEGET---------------------RIRGRVMGTFGYLPPEYI-ATGDCNEKCDVYSF  133 (159)
Q Consensus        76 nil~~~~~~~~l~d~~~~~~~~~~~~---------------------~~~~~~~~~~~~~ape~~-~~~~~~~~~DvwS~  133 (159)
                      ||+++.+..+||+|||++........                     .......++..|+|||.+ ....++.++|+||+
T Consensus       159 NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSl  238 (432)
T 3n9x_A          159 NCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWST  238 (432)
T ss_dssp             GEEECTTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHH
T ss_pred             HeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchH
Confidence            99999999999999999876543211                     112345678999999986 45669999999999


Q ss_pred             cccccCcceeccccc
Q 031436          134 DGSRDSGHLTGRAWY  148 (159)
Q Consensus       134 g~~~~~~~~~g~~p~  148 (159)
                      ||++ ++|++|..||
T Consensus       239 G~il-~ell~g~~p~  252 (432)
T 3n9x_A          239 GCIF-AELLNMLQSH  252 (432)
T ss_dssp             HHHH-HHHHTTCTTT
T ss_pred             HHHH-HHHHhccccc
Confidence            9999 9999844333

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=2.9e-29  Score=177.94  Aligned_cols=144  Identities=26%  Similarity=0.341  Sum_probs=118.7

Q ss_pred             CeEEEEEecCCCc-eEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe
Q 031436            1 MRLIGCCLETENP-VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~~~~~-~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~   79 (159)
                      |++++++.+.+.. ++++||+.+|+|.+.+....    ..+++..+..++.|++.|+.|||   +++++|+|++|.||++
T Consensus        85 v~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili  157 (298)
T 3pls_A           85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQ----RNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCML  157 (298)
T ss_dssp             CCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred             eeEEEEEecCCCCcEEEEecccCCCHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEE
Confidence            4678888766555 89999999999999997632    45788889999999999999999   8999999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcc---eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           80 QEQSVAKLFDFSYSESIPEGET---RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      +.+..+|++|||++........   .......++..|+|||.+.+..++.++|+||+|+++ |+|++ +.+||...+
T Consensus       158 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~g~~~~~~~~~  233 (298)
T 3pls_A          158 DESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLL-WELLTRGAPPYRHID  233 (298)
T ss_dssp             CTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHH-HHHHHTSCCTTTTSC
T ss_pred             cCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHH-HHHhhCCCCCCccCC
Confidence            9999999999999875543221   111233467789999999999999999999999999 99999 556665543

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.95  E-value=9.1e-30  Score=179.37  Aligned_cols=140  Identities=20%  Similarity=0.296  Sum_probs=116.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..+++|||+++++|.+.+..... ....+++..+..++.|++.|+.|||   +++++|+||+|+||+++
T Consensus        74 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~  149 (289)
T 1x8b_A           74 VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFIS  149 (289)
T ss_dssp             CCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC
T ss_pred             eeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEc
Confidence            5789999999999999999999999998875311 1135788999999999999999999   89999999999999998


Q ss_pred             C-------------------CCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCc
Q 031436           81 E-------------------QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSG  140 (159)
Q Consensus        81 ~-------------------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~  140 (159)
                      .                   ...++++|||.+........     ..++..|+|||.+.+. .++.++|+||||+++ ++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~-----~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il-~~  223 (289)
T 1x8b_A          150 RTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV-----EEGDSRFLANEVLQENYTHLPKADIFALALTV-VC  223 (289)
T ss_dssp             --------------------CCCEEECCCTTCEETTCSCC-----CCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHH-HH
T ss_pred             CCCCCcccccccccccccCCceEEEEcccccccccCCccc-----cCCCccccChhHhcCCCCCCchhhHHHHHHHH-HH
Confidence            4                   34789999998876644322     2478889999999766 566899999999999 99


Q ss_pred             ceeccccccc
Q 031436          141 HLTGRAWYRS  150 (159)
Q Consensus       141 ~~~g~~p~~~  150 (159)
                      +++|.+|+..
T Consensus       224 l~~~~~~~~~  233 (289)
T 1x8b_A          224 AAGAEPLPRN  233 (289)
T ss_dssp             HTTCCCCCSS
T ss_pred             HhcCCCCCcc
Confidence            9999877644

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.95  E-value=1.5e-29  Score=181.32  Aligned_cols=141  Identities=28%  Similarity=0.455  Sum_probs=119.5

Q ss_pred             CeEEEEEecC--CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLET--ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      |++++++.+.  ...+++|||+++|+|.+.+...      .+++..+..++.|++.++.+||   +.+++|+||+|+||+
T Consensus        96 v~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil  166 (318)
T 3lxp_A           96 IKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVL  166 (318)
T ss_dssp             CCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGS------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEE
T ss_pred             hhEEEEEecCCCceEEEEEecccCCcHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEE
Confidence            5788888874  5678999999999999998653      4788899999999999999999   899999999999999


Q ss_pred             ecCCCceEEEecCCCcccCCCcc--eeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           79 FQEQSVAKLFDFSYSESIPEGET--RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        79 ~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      ++.+..++++|||++........  .......++..|+|||.+.+..++.++|+||+|+++ ++|++|..||...
T Consensus       167 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~ll~g~~p~~~~  240 (318)
T 3lxp_A          167 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTL-YELLTHCDSSQSP  240 (318)
T ss_dssp             ECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHH-HHHHTTTCGGGSH
T ss_pred             EcCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHH-HHHHhCCCccccc
Confidence            99999999999999877654332  112234467779999999988899999999999999 9999999998754

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.95  E-value=3.6e-29  Score=177.50  Aligned_cols=141  Identities=28%  Similarity=0.343  Sum_probs=121.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..+++|||+++++|.+.+...     ..+++..+..++.|++.|+.+||   +.+++|+||+|.||+++
T Consensus        87 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~  158 (298)
T 1phk_A           87 IQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLD  158 (298)
T ss_dssp             CCEEEEEECSSEEEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC
T ss_pred             eeeeeeeccCCeEEEEEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEc
Confidence            57889999999999999999999999998753     45788999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccc------cCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA------TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~------~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||.+........  .....++..|+|||.+.      ...++.++|+||+|+++ ++|++|+.||...+
T Consensus       159 ~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l-~~l~~g~~p~~~~~  233 (298)
T 1phk_A          159 DDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM-YTLLAGSPPFWHRK  233 (298)
T ss_dssp             TTCCEEECCCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             CCCcEEEecccchhhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHH-HHHHHCCCCCcCcc
Confidence            999999999998876543322  12345788899999885      44678999999999999 99999999997653

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.95  E-value=5.8e-30  Score=184.89  Aligned_cols=142  Identities=25%  Similarity=0.370  Sum_probs=101.3

Q ss_pred             CeEEEEEec----CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCC
Q 031436            1 MRLIGCCLE----TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSN   76 (159)
Q Consensus         1 v~l~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~n   76 (159)
                      +++++++..    ++..++||||+++|+|.+.+.....   ..+++..+..++.|++.|+.|||   +++++|+||+|.|
T Consensus        85 ~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~---~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~N  158 (336)
T 3fhr_A           85 VCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGD---QAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPEN  158 (336)
T ss_dssp             CCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-C---CCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGG
T ss_pred             HHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHH
Confidence            467777765    3457899999999999999976432   46899999999999999999999   8999999999999


Q ss_pred             EEecC---CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           77 ILFQE---QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        77 il~~~---~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      |+++.   +..+|++|||++........   ....+++.|+|||.+.+..++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       159 Ill~~~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~g~~pf~~~~  233 (336)
T 3fhr_A          159 LLYTSKEKDAVLKLTDFGFAKETTQNAL---QTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM-YILLCGFPPFYSNT  233 (336)
T ss_dssp             EEESCSSTTCCEEECCCTTCEEC-------------------------CHHHHHHHHHHHHHHH-HHHHHSSCCC----
T ss_pred             EEEEecCCCceEEEeccccceecccccc---ccCCCCcCccChhhhCCCCCCchhhHHHHHHHH-HHHHHCCCCCCCcc
Confidence            99975   34599999998876543221   233568889999999888899999999999999 99999999997654

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.95  E-value=5e-29  Score=179.15  Aligned_cols=136  Identities=20%  Similarity=0.258  Sum_probs=115.4

Q ss_pred             CeEEEEEec--CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLE--TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      +++++++.+  ....+++|||+++++|.+.+.        .++...+..++.|++.|+.|||   +++++|+||||+||+
T Consensus        94 ~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil  162 (330)
T 3nsz_A           94 ITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ--------TLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVM  162 (330)
T ss_dssp             CCEEEEEECTTTCCEEEEEECCCCCCHHHHGG--------GCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEE
T ss_pred             EEeeeeeccCCCCceEEEEeccCchhHHHHHH--------hCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEE
Confidence            467888887  567899999999999998873        4678888999999999999999   899999999999999


Q ss_pred             ecCCC-ceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceeccccccc
Q 031436           79 FQEQS-VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        79 ~~~~~-~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      ++.+. .++++|||++........  .....++..|+|||.+.+ ..++.++|+||+|+++ ++|++|+.||..
T Consensus       163 ~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il-~~ll~g~~p~~~  233 (330)
T 3nsz_A          163 IDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML-ASMIFRKEPFFH  233 (330)
T ss_dssp             EETTTTEEEECCCTTCEECCTTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHH-HHHHHTCSSSSC
T ss_pred             EcCCCCEEEEEeCCCceEcCCCCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHH-HHHHhCCCCccc
Confidence            99766 899999999876543322  123457888999999877 6689999999999999 999999999843

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.95  E-value=3.2e-29  Score=179.07  Aligned_cols=149  Identities=23%  Similarity=0.418  Sum_probs=115.1

Q ss_pred             CeEEEEEecCC-----CceEEEEecCCCChHHHhhCCC-CCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCLETE-----NPVLVFEYVEYGTLADRIYHPR-QPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~~~-----~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      |++++++.+.+     ..++++||+++++|.+.+.... ......+++..+..++.|++.|+.|||   +++++|+||+|
T Consensus        99 v~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp  175 (313)
T 3brb_A           99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAA  175 (313)
T ss_dssp             CCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSG
T ss_pred             eeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCc
Confidence            46778887654     3589999999999999885322 112256889999999999999999999   89999999999


Q ss_pred             CCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           75 SNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        75 ~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .||+++.+..+|++|||++........ .......++..|+|||.+.+..++.++|+||||+++ |+|++ |..||.+.+
T Consensus       176 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~el~~~g~~p~~~~~  254 (313)
T 3brb_A          176 RNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTM-WEIATRGMTPYPGVQ  254 (313)
T ss_dssp             GGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHH-HHHHTTSCCSSTTCC
T ss_pred             ceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHH-HHHHhcCCCCCccCC
Confidence            999999999999999999876543321 112233456789999999999999999999999999 99999 899998765


Q ss_pred             C
Q 031436          153 W  153 (159)
Q Consensus       153 ~  153 (159)
                      .
T Consensus       255 ~  255 (313)
T 3brb_A          255 N  255 (313)
T ss_dssp             G
T ss_pred             H
Confidence            4

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.95  E-value=3.9e-30  Score=189.52  Aligned_cols=143  Identities=27%  Similarity=0.348  Sum_probs=118.5

Q ss_pred             CeEEEEEecCC--CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLETE--NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      |++++++.+.+  ..++||||+++|+|.+.+.....  ...+++..+..++.|++.|+.|||   +++++||||||+||+
T Consensus        70 v~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIl  144 (396)
T 4eut_A           70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIM  144 (396)
T ss_dssp             CCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGG--TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEE
T ss_pred             CeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEE
Confidence            57888887655  67999999999999999875421  133889999999999999999999   899999999999999


Q ss_pred             e----cCCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc--------CCCCCCcceEeccccccCcceeccc
Q 031436           79 F----QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT--------GDCNEKCDVYSFDGSRDSGHLTGRA  146 (159)
Q Consensus        79 ~----~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~--------~~~~~~~DvwS~g~~~~~~~~~g~~  146 (159)
                      +    +.+..+|++|||++.........  ....++..|+|||.+.+        ..++.++|+||||+++ |+|++|+.
T Consensus       145 l~~~~~~~~~~kL~DFG~a~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il-~el~tg~~  221 (396)
T 4eut_A          145 RVIGEDGQSVYKLTDFGAARELEDDEQF--VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTF-YHAATGSL  221 (396)
T ss_dssp             EEECTTSCEEEEECCGGGCEECCCGGGS--SCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHH-HHHHHSSC
T ss_pred             EeecCCCceeEEEecCCCceEccCCCcc--ccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHH-HHHHHCCC
Confidence            8    66677999999998766443221  23457889999999865        4577899999999999 99999999


Q ss_pred             ccccC
Q 031436          147 WYRSE  151 (159)
Q Consensus       147 p~~~~  151 (159)
                      ||...
T Consensus       222 Pf~~~  226 (396)
T 4eut_A          222 PFRPF  226 (396)
T ss_dssp             SEECT
T ss_pred             CCCCC
Confidence            99754

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.95  E-value=2.3e-29  Score=192.76  Aligned_cols=134  Identities=16%  Similarity=0.118  Sum_probs=97.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++++++.+||||||++|++|.+.+...     .+++..   .++.||+.||.|+|   ++|++||||||+|||++
T Consensus       305 ~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~-----~~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~  373 (569)
T 4azs_A          305 PAVLAHGENAQSGWLVMEKLPGRLLSDMLAAG-----EEIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVD  373 (569)
T ss_dssp             CCEEEEEECSSEEEEEEECCCSEEHHHHHHTT-----CCCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEEC
T ss_pred             eEEEEEEEECCEEEEEEecCCCCcHHHHHHhC-----CCCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEEC
Confidence            57899999999999999999999999999764     345443   47899999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceeccccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWY  148 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~  148 (159)
                      .++.+||+|||+++....... ......||+.|+|||.+.+. +..++|+||+|+.. +++.++..++
T Consensus       374 ~dg~vKL~DFGlAr~~~~~~~-~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~-~~l~~~~~~~  438 (569)
T 4azs_A          374 ARQHARLIDFGSIVTTPQDCS-WPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHP-FNLPQPWSNW  438 (569)
T ss_dssp             TTSCEEECCCTTEESCC---C-CSHHHHHHHHHHHHHHC-------------------CCCCTTHHHH
T ss_pred             CCCCEEEeecccCeeCCCCCc-cccCceechhhccHHHhCCC-CCCcccccccccch-hhhccccchh
Confidence            999999999999887654332 22345689999999998764 56789999999999 8888876554

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.95  E-value=2.1e-29  Score=184.86  Aligned_cols=133  Identities=20%  Similarity=0.303  Sum_probs=109.6

Q ss_pred             CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec-CCCceEEEec
Q 031436           12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ-EQSVAKLFDF   90 (159)
Q Consensus        12 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~-~~~~~~l~d~   90 (159)
                      ..++||||++ |+|.+.+..... ....+++..+..++.|++.|+.|||   +++++||||||+||+++ .+..+|++||
T Consensus       112 ~~~lv~e~~~-~~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH---~~gi~H~Dikp~Nil~~~~~~~~kl~Df  186 (383)
T 3eb0_A          112 YLNVIMEYVP-DTLHKVLKSFIR-SGRSIPMNLISIYIYQLFRAVGFIH---SLGICHRDIKPQNLLVNSKDNTLKLCDF  186 (383)
T ss_dssp             EEEEEECCCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEEETTTTEEEECCC
T ss_pred             EEEEEEecCC-ccHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH---HCcCccCccCHHHEEEcCCCCcEEEEEC
Confidence            4789999997 588777653211 1156889999999999999999999   99999999999999997 5788999999


Q ss_pred             CCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCC
Q 031436           91 SYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      |++.........  ....++..|+|||.+.+. .++.++|+||+|+++ ++|++|+.||.+.+
T Consensus       187 g~a~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il-~ell~g~~pf~~~~  246 (383)
T 3eb0_A          187 GSAKKLIPSEPS--VAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF-GELILGKPLFSGET  246 (383)
T ss_dssp             TTCEECCTTSCC--CCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             CCCcccCCCCCC--cCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH-HHHHhCCCCCCCCC
Confidence            998765443322  234578889999998875 489999999999999 99999999998764

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.95  E-value=1.1e-29  Score=182.53  Aligned_cols=143  Identities=24%  Similarity=0.321  Sum_probs=120.1

Q ss_pred             CeEEEEEe--cCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCL--ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~--~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      +++++++.  +.+..++||||+++++|.+++...+    ..+++..+..++.|++.|+.|||   +.+++|+||+|.||+
T Consensus        87 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl  159 (327)
T 3lxl_A           87 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNIL  159 (327)
T ss_dssp             CCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEE
T ss_pred             eEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEE
Confidence            46778776  4456889999999999999987532    35888999999999999999999   899999999999999


Q ss_pred             ecCCCceEEEecCCCcccCCCcce--eeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           79 FQEQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        79 ~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      ++.+..++++|||++.........  ......++..|+|||.+.+..++.++|+||+|+++ ++|++|..||...
T Consensus       160 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~ll~g~~p~~~~  233 (327)
T 3lxl_A          160 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVL-YELFTYCDKSCSP  233 (327)
T ss_dssp             EEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHH-HHHHTTTCGGGSH
T ss_pred             ECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHH-HHHHhCCCCCccc
Confidence            999999999999998766443321  12233467779999999988899999999999999 9999999998653

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.95  E-value=2e-29  Score=182.41  Aligned_cols=143  Identities=22%  Similarity=0.321  Sum_probs=121.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHH------hhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCC-CCeEEecCC
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADR------IYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS-RPIVFRNVK   73 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~-~~~~h~~l~   73 (159)
                      +++++++.+++..++||||+++++|.+.      +....   ...+++..+..++.|++.|+.|||   + .+++|+||+
T Consensus       106 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~  179 (348)
T 2pml_X          106 LTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY---TCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVK  179 (348)
T ss_dssp             CCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS---CCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCC
T ss_pred             ceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc---ccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCC
Confidence            4678999999999999999999999988      43321   256889999999999999999999   7 999999999


Q ss_pred             CCCEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCC-CcceEeccccccCcceecccccccC
Q 031436           74 PSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNE-KCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        74 ~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~-~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      |.||+++.+..++++|||.+......   ......++..|+|||.+.+. .++. ++|+||+|+++ ++|++|+.||.+.
T Consensus       180 p~Nil~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il-~~l~~g~~pf~~~  255 (348)
T 2pml_X          180 PSNILMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL-YVMFYNVVPFSLK  255 (348)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHH-HHHHHSSCSSCCS
T ss_pred             hHhEEEcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHH-HHHHhCCCCCCCC
Confidence            99999999999999999988765433   12234578899999999877 5665 99999999999 9999999999875


Q ss_pred             CC
Q 031436          152 DW  153 (159)
Q Consensus       152 ~~  153 (159)
                      +.
T Consensus       256 ~~  257 (348)
T 2pml_X          256 IS  257 (348)
T ss_dssp             SC
T ss_pred             Cc
Confidence            43

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.95  E-value=2e-29  Score=177.03  Aligned_cols=141  Identities=26%  Similarity=0.352  Sum_probs=114.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..++++||+++++|.+.+...     ..++...+..++.|++.|+.+||   +++++|+||+|.||+++
T Consensus        74 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~  145 (276)
T 2h6d_A           74 IKLYQVISTPTDFFMVMEYVSGGELFDYICKH-----GRVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLD  145 (276)
T ss_dssp             CCEEEEEECSSEEEEEEECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEEC
T ss_pred             eEEEEEEecCCeEEEEEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEEC
Confidence            57889999999999999999999999998654     35788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCC-CCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC-NEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~-~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||.+........  .....++..|+|||.+.+..+ +.++|+||+|+++ ++|++|+.||...+
T Consensus       146 ~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l-~~l~~g~~p~~~~~  215 (276)
T 2h6d_A          146 AHMNAKIADFGLSNMMSDGEF--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVIL-YALLCGTLPFDDEH  215 (276)
T ss_dssp             TTSCEEECCCCGGGCCCC---------------CCTGGGTTSCCCHHHHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             CCCCEEEeecccccccCCCcc--eecccCCccccCHHHHcCCCCCCccchHHHHHHHH-HHHHhCCCCCCCCc
Confidence            999999999998876543321  123357888999999987765 6899999999999 99999999997654

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.95  E-value=2.4e-29  Score=186.61  Aligned_cols=144  Identities=24%  Similarity=0.319  Sum_probs=114.0

Q ss_pred             CeEEEEEecCC------CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCLETE------NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~~~------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      |+++++|....      .+++||||+.+ ++.+.+..... ....+++..+..++.|++.||.|||   +.+++||||||
T Consensus       110 v~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp  184 (420)
T 1j1b_A          110 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKP  184 (420)
T ss_dssp             CCEEEEEEEEETTTTEEEEEEEEECCCE-EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSG
T ss_pred             cceeeEEeccCCCCcceeEEeehhcccc-cHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCh
Confidence            46777774321      36799999974 77766543111 1156888899999999999999999   89999999999


Q ss_pred             CCEEecCC-CceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCC
Q 031436           75 SNILFQEQ-SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        75 ~nil~~~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +||+++.+ ..+||+|||+++.......  .....++..|+|||.+.+. .++.++|+|||||++ |+|++|+.||.+.+
T Consensus       185 ~NILl~~~~~~~kl~DFG~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il-~ell~G~~pf~~~~  261 (420)
T 1j1b_A          185 QNLLLDPDTAVLKLCDFGSAKQLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVL-AELLLGQPIFPGDS  261 (420)
T ss_dssp             GGEEEETTTTEEEECCCTTCEECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             hhEEEeCCCCeEEeccchhhhhcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHH-HHHHhCCCCCCCCC
Confidence            99999965 5689999999876543322  1234678899999998765 689999999999999 99999999998764

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.95  E-value=2.7e-29  Score=176.84  Aligned_cols=131  Identities=28%  Similarity=0.433  Sum_probs=112.2

Q ss_pred             CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEe
Q 031436           10 TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFD   89 (159)
Q Consensus        10 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d   89 (159)
                      ....+++|||+++++|.+.+.....   ..+++..+..++.|++.|+.|||   +++++|+||+|+||+++.+..++++|
T Consensus        92 ~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~D  165 (284)
T 2a19_B           92 TKCLFIQMEFCDKGTLEQWIEKRRG---EKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGD  165 (284)
T ss_dssp             EEEEEEEECCCCSCBHHHHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECC
T ss_pred             cceEEEEEeccCCCCHHHHHhhccC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCEEECc
Confidence            3457899999999999999875422   45788889999999999999999   89999999999999999999999999


Q ss_pred             cCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccc
Q 031436           90 FSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYR  149 (159)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~  149 (159)
                      ||++.........  ....++..|+|||.+.+..++.++|+||||+++ ++|++|..|+.
T Consensus       166 fg~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~~~~~~~  222 (284)
T 2a19_B          166 FGLVTSLKNDGKR--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLIL-AELLHVCDTAF  222 (284)
T ss_dssp             CTTCEESSCCSCC--CCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHH-HHHHSCCSSHH
T ss_pred             chhheeccccccc--cccCCcccccChhhhccCCCcchhhhHHHHHHH-HHHHhcCCcch
Confidence            9988766443221  223578899999999998899999999999999 99999988774

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.95  E-value=2.1e-29  Score=179.74  Aligned_cols=146  Identities=21%  Similarity=0.310  Sum_probs=113.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..+++|||+.+++|.+.+..... ....++...+..++.|++.|+.+||   +.+++|+||+|.||+++
T Consensus        95 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~  170 (310)
T 2wqm_A           95 IKYYASFIEDNELNIVLELADAGDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFIT  170 (310)
T ss_dssp             CCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEC
T ss_pred             eeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEc
Confidence            5788999999999999999999999998864211 1145788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.++++|||++......... .....++..|+|||.+.+..++.++|+||||+++ ++|++|..||.+..
T Consensus       171 ~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il-~~l~~g~~p~~~~~  240 (310)
T 2wqm_A          171 ATGVVKLGDLGLGRFFSSKTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL-YEMAALQSPFYGDK  240 (310)
T ss_dssp             TTSCEEECCC-------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHH-HHHHHSSCTTC---
T ss_pred             CCCCEEEEeccceeeecCCCcc-ccccCCCeeEeChHHhCCCCCCchhhHHHHHHHH-HHHHhCCCCCcccc
Confidence            9999999999987755432221 2234578889999999998999999999999999 99999999997653

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.95  E-value=3.2e-29  Score=177.98  Aligned_cols=148  Identities=25%  Similarity=0.348  Sum_probs=119.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCC---CCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHP---RQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNI   77 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~ni   77 (159)
                      +++++++..++..+++|||+++++|.+.+...   .......+++..+..++.|++.|+.|||   +.+++|+||+|.||
T Consensus        76 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Ni  152 (303)
T 2vwi_A           76 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNI  152 (303)
T ss_dssp             CCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGE
T ss_pred             eeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhE
Confidence            57889999999999999999999999988631   1111245888999999999999999999   89999999999999


Q ss_pred             EecCCCceEEEecCCCcccCCCcc----eeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCC
Q 031436           78 LFQEQSVAKLFDFSYSESIPEGET----RIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        78 l~~~~~~~~l~d~~~~~~~~~~~~----~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +++.++.++++|||++........    .......++..|+|||.+.+ ..++.++|+||+|+++ ++|++|+.||...+
T Consensus       153 l~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il-~~l~~g~~pf~~~~  231 (303)
T 2vwi_A          153 LLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA-IELATGAAPYHKYP  231 (303)
T ss_dssp             EECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHH-HHHHHSSCTTTTSC
T ss_pred             EEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHH-HHHHhCCCCCccCc
Confidence            999999999999998765432211    11123457888999999875 5689999999999999 99999999997643

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.95  E-value=1.4e-29  Score=186.89  Aligned_cols=147  Identities=22%  Similarity=0.323  Sum_probs=110.9

Q ss_pred             CeEEEEEe--cCCCceEEEEecCCCChHHHhhCCC----CCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCL--ETENPVLVFEYVEYGTLADRIYHPR----QPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~--~~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      |++++++.  .+...++||||+. ++|.+.+...+    ......+++..+..++.|++.|+.|||   +++++||||||
T Consensus        81 v~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp  156 (405)
T 3rgf_A           81 ISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKP  156 (405)
T ss_dssp             CCCCEEEEETTTTEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred             eeEeeEEecCCCCeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCH
Confidence            46778884  4667899999996 58888775321    111235888999999999999999999   89999999999


Q ss_pred             CCEEe----cCCCceEEEecCCCcccCCCcc--eeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccc
Q 031436           75 SNILF----QEQSVAKLFDFSYSESIPEGET--RIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAW  147 (159)
Q Consensus        75 ~nil~----~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p  147 (159)
                      +||++    +.+..+||+|||++........  .......++..|+|||.+.+. .++.++|+||+||++ |+|++|+.|
T Consensus       157 ~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il-~ell~g~~p  235 (405)
T 3rgf_A          157 ANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIF-AELLTSEPI  235 (405)
T ss_dssp             GGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHH-HHHHHSSCT
T ss_pred             HHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHH-HHHHhCCCC
Confidence            99999    5667899999999876543221  122345678999999999874 489999999999999 999999999


Q ss_pred             cccCC
Q 031436          148 YRSED  152 (159)
Q Consensus       148 ~~~~~  152 (159)
                      |.+.+
T Consensus       236 f~~~~  240 (405)
T 3rgf_A          236 FHCRQ  240 (405)
T ss_dssp             TCCCC
T ss_pred             CCCcc
Confidence            97654

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.95  E-value=5.2e-29  Score=178.71  Aligned_cols=141  Identities=23%  Similarity=0.331  Sum_probs=117.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++..+ ..+++|||+++++|.+.+...     ..+++..+..++.|++.|+.|||   +++++|+||+|+||+++
T Consensus        78 ~~~~~~~~~~-~~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~  148 (322)
T 2ycf_A           78 IKIKNFFDAE-DYYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLS  148 (322)
T ss_dssp             CCEEEEEESS-SEEEEEECCTTEETHHHHSTT-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEES
T ss_pred             ceEeeEEcCC-ceEEEEecCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEe
Confidence            4678888654 489999999999999988653     45788899999999999999999   89999999999999998


Q ss_pred             CCC---ceEEEecCCCcccCCCcceeeeeecccccccCccccc---cCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQS---VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA---TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~---~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~---~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+.   .+|++|||++........  .....++..|+|||.+.   ...++.++|+||||+++ |+|++|+.||...+.
T Consensus       149 ~~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il-~~l~~g~~pf~~~~~  224 (322)
T 2ycf_A          149 SQEEDCLIKITDFGHSKILGETSL--MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL-FICLSGYPPFSEHRT  224 (322)
T ss_dssp             SSSSSCCEEECCCTTCEECCCCHH--HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHH-HHHHHSSCSSCSTTC
T ss_pred             cCCCCCeEEEccCccceecccccc--cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHH-HHHHhCCCCCcccch
Confidence            654   499999999876643321  12345788999999974   45688999999999999 999999999977543

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.95  E-value=3.1e-29  Score=183.11  Aligned_cols=138  Identities=23%  Similarity=0.349  Sum_probs=105.4

Q ss_pred             CeEEEEEecC------CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCLET------ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~~------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      |++++++...      +..++++|++ +++|.+.+..      ..++...+..++.|++.|+.|||   +.+++||||||
T Consensus        91 v~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp  160 (367)
T 2fst_X           91 IGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKP  160 (367)
T ss_dssp             CCCSEEECSCSSGGGCCCCEEEEECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred             CcEEEEEecCCccccCCeEEEEeccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCH
Confidence            4567777543      5679999999 6899888754      35788999999999999999999   89999999999


Q ss_pred             CCEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCCC
Q 031436           75 SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        75 ~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .||+++.+..+|++|||++......    .....++..|+|||.+.+ ..++.++|+||+||++ ++|++|+.||.+.+.
T Consensus       161 ~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il-~ell~g~~pf~~~~~  235 (367)
T 2fst_X          161 SNLAVNEDCELKILDFGLARHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM-AELLTGRTLFPGTDH  235 (367)
T ss_dssp             GGEEECTTCCEEECC-------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHH-HHHHHSSCSCCCSSH
T ss_pred             hhEEECCCCCEEEeecccccccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHH-HHHHhCCCCCCCCCH
Confidence            9999999999999999998765332    123467889999999877 6789999999999999 999999999988653

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.95  E-value=1.2e-29  Score=179.28  Aligned_cols=142  Identities=23%  Similarity=0.305  Sum_probs=109.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCC-CeEEecCCCCCEEe
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR-PIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~-~~~h~~l~~~nil~   79 (159)
                      |++++++.+++..+++|||++ |+|.+.+..... ....+++..+..++.|++.|+.|||   ++ +++|+||+|+||++
T Consensus        69 v~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~  143 (290)
T 3fme_A           69 VTFYGALFREGDVWICMELMD-TSLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLI  143 (290)
T ss_dssp             CCEEEEEECSSSEEEEEECCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEE
T ss_pred             EEEeeeeeccCCEEEEEehhc-cchHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEE
Confidence            578999999999999999996 588777653211 1156889999999999999999999   76 99999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcceeeeeecccccccCcccc----ccCCCCCCcceEeccccccCcceeccccccc
Q 031436           80 QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI----ATGDCNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~----~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      +.+..+|++|||++........  .....++..|+|||.+    .+..++.++|+||+|+++ +++++|+.||..
T Consensus       144 ~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il-~~l~~g~~p~~~  215 (290)
T 3fme_A          144 NALGQVKMCDFGISGYLVDDVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITM-IELAILRFPYDS  215 (290)
T ss_dssp             CTTCCEEBCCC-----------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHH-HHHHHTSCSSCC
T ss_pred             CCCCCEEEeecCCccccccccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHH-HHHHHCCCCccc
Confidence            9999999999998876543322  1223578889999996    456789999999999999 999999999975

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.95  E-value=3.4e-29  Score=176.99  Aligned_cols=143  Identities=22%  Similarity=0.385  Sum_probs=118.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.++ ..++++||+++++|.+.+....    ..+++..+..++.|++.|+.+||   +++++|+||+|+||+++
T Consensus        84 ~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~  155 (291)
T 1u46_A           84 IRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLA  155 (291)
T ss_dssp             CCEEEEECSS-SCEEEEECCTTCBHHHHHHHHG----GGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEE
T ss_pred             ccEEEEEccC-CceeeEecccCCCHHHHHHhcc----CCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEc
Confidence            5678888764 4889999999999999887532    45788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcce--eeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..++++|||++.........  ......++..|+|||.+.+..++.++|+||||+++ ++|++ |+.||.+.+
T Consensus       156 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~~g~~p~~~~~  229 (291)
T 1u46_A          156 TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL-WEMFTYGQEPWIGLN  229 (291)
T ss_dssp             ETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHH-HHHHTTSCCTTTTCC
T ss_pred             CCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHH-HHHHhCCCCCcccCC
Confidence            9999999999998776543321  11223456679999999888899999999999999 99999 999997654

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.95  E-value=1.4e-29  Score=178.24  Aligned_cols=143  Identities=24%  Similarity=0.354  Sum_probs=114.1

Q ss_pred             CeEEEEEecC-CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe
Q 031436            1 MRLIGCCLET-ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~   79 (159)
                      |++++++.+. +..++++||+++++|.+.+.....   ..+++..+..++.|++.|+.+||   +++++|+||+|.||++
T Consensus        77 v~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~  150 (278)
T 1byg_A           77 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLV  150 (278)
T ss_dssp             CCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred             eeEEEEEEcCCCceEEEEecCCCCCHHHHHHhccc---ccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEE
Confidence            5678887554 578999999999999998865321   23678888999999999999999   8999999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCCc
Q 031436           80 QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDWK  154 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~~  154 (159)
                      +.+..++++|||++........    ...++..|+|||.+.+..++.++|+||+|+++ +++++ |+.||...+.+
T Consensus       151 ~~~~~~~l~Dfg~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~t~g~~p~~~~~~~  221 (278)
T 1byg_A          151 SEDNVAKVSDFGLTKEASSTQD----TGKLPVKWTAPEALREKKFSTKSDVWSFGILL-WEIYSFGRVPYPRIPLK  221 (278)
T ss_dssp             CTTSCEEECCCCC----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTSCCSCTTSCGG
T ss_pred             eCCCcEEEeecccccccccccc----CCCccccccCHHHhCCCCCCchhcHHHHHHHH-HHHHhCCCCCCCCCCHH
Confidence            9999999999998765433221    22457789999999988999999999999999 99998 99999876543

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.95  E-value=5.5e-29  Score=178.10  Aligned_cols=143  Identities=17%  Similarity=0.253  Sum_probs=115.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+.+..++++||+++++|.+.+...+    ..+++..+..++.|++.|+.+||   +.+++|+||+|+||+++
T Consensus        92 v~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~  164 (319)
T 2y4i_B           92 VLFMGACMSPPHLAIITSLCKGRTLYSVVRDAK----IVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD  164 (319)
T ss_dssp             CCCCEEEECSSCEEEECBCCCSEEHHHHTTSSC----CCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC
T ss_pred             eEEEEEEecCCceEEEeecccCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe
Confidence            467899999999999999999999999986542    45788999999999999999999   89999999999999998


Q ss_pred             CCCceEEEecCCCcccCCCc----ceeeeeecccccccCcccccc---------CCCCCCcceEeccccccCcceecccc
Q 031436           81 EQSVAKLFDFSYSESIPEGE----TRIRGRVMGTFGYLPPEYIAT---------GDCNEKCDVYSFDGSRDSGHLTGRAW  147 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~----~~~~~~~~~~~~~~ape~~~~---------~~~~~~~DvwS~g~~~~~~~~~g~~p  147 (159)
                       ++.++++|||++.......    ........++..|+|||.+.+         ..++.++|+||||+++ |+|++|+.|
T Consensus       165 -~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il-~el~~g~~p  242 (319)
T 2y4i_B          165 -NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIW-YELHAREWP  242 (319)
T ss_dssp             ---CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHH-HHHHHSSCS
T ss_pred             -CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHH-HHHHhCCCC
Confidence             5689999999876442111    111122347788999999864         3478899999999999 999999999


Q ss_pred             cccCC
Q 031436          148 YRSED  152 (159)
Q Consensus       148 ~~~~~  152 (159)
                      |...+
T Consensus       243 ~~~~~  247 (319)
T 2y4i_B          243 FKTQP  247 (319)
T ss_dssp             SSSCC
T ss_pred             CCCCC
Confidence            97654

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.95  E-value=1e-28  Score=183.78  Aligned_cols=143  Identities=22%  Similarity=0.278  Sum_probs=111.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..+++|||+. |+|.+.+....    ..........++.|++.|+.|||   +++++||||||+||+++
T Consensus        81 v~l~~~~~~~~~~~lv~E~~~-g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~  152 (432)
T 3p23_A           81 IRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKD----FAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILIS  152 (432)
T ss_dssp             CCEEEEEEETTEEEEEEECCS-EEHHHHHHSSS----CCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEEC
T ss_pred             CeEEEEEecCCEEEEEEECCC-CCHHHHHHhcC----CCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEe
Confidence            578999999999999999996 69999987653    23444556789999999999999   89999999999999995


Q ss_pred             C-----CCceEEEecCCCcccCCCcc--eeeeeecccccccCccccc---cCCCCCCcceEeccccccCccee-cccccc
Q 031436           81 E-----QSVAKLFDFSYSESIPEGET--RIRGRVMGTFGYLPPEYIA---TGDCNEKCDVYSFDGSRDSGHLT-GRAWYR  149 (159)
Q Consensus        81 ~-----~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~---~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~  149 (159)
                      .     ...++++|||++........  .......+++.|+|||.+.   ...++.++|+||+||++ +++++ |..||.
T Consensus       153 ~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il-~ellt~g~~pf~  231 (432)
T 3p23_A          153 MPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVF-YYVISEGSHPFG  231 (432)
T ss_dssp             CCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHH-HHHHTTSCBTTB
T ss_pred             cCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHH-HHHHcCCCCCcc
Confidence            3     23578999999876643321  1223356899999999997   45678899999999999 99999 999997


Q ss_pred             cCC
Q 031436          150 SED  152 (159)
Q Consensus       150 ~~~  152 (159)
                      ...
T Consensus       232 ~~~  234 (432)
T 3p23_A          232 KSL  234 (432)
T ss_dssp             STT
T ss_pred             hhh
Confidence            543

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.95  E-value=2.8e-29  Score=180.50  Aligned_cols=148  Identities=26%  Similarity=0.350  Sum_probs=120.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCC--CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ--PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      |++++++.+++..+++|||+++++|.+++.....  .....+++..+..++.|++.|+.|||   +.+++|+||+|.||+
T Consensus        96 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIl  172 (327)
T 2yfx_A           96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCL  172 (327)
T ss_dssp             CCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEE
T ss_pred             CeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEE
Confidence            5789999999999999999999999999876432  12245788889999999999999999   899999999999999


Q ss_pred             ecC---CCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           79 FQE---QSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        79 ~~~---~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      ++.   ...++++|||++........ .......++..|+|||.+.+..++.++|+||||+++ |+|++ |+.||...+
T Consensus       173 i~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~ellt~g~~p~~~~~  250 (327)
T 2yfx_A          173 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL-WEIFSLGYMPYPSKS  250 (327)
T ss_dssp             ESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTSCCSSTTCC
T ss_pred             EecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHH-HHHHcCCCCCCCCcC
Confidence            984   44699999998764432221 112233567789999999888899999999999999 99998 999998754

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.95  E-value=5.6e-29  Score=176.19  Aligned_cols=144  Identities=23%  Similarity=0.300  Sum_probs=119.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+.+..+++|||+++++|.+.+.....  ...+++..+..++.|++.|+.+||   +.+++|+||+|.||+++
T Consensus        82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~  156 (295)
T 2clq_A           82 VQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWG--PLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLIN  156 (295)
T ss_dssp             CCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTC--CCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEE
T ss_pred             eeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEE
Confidence            5789999999999999999999999998875422  134567788889999999999999   89999999999999998


Q ss_pred             C-CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCC--CCCCcceEeccccccCcceecccccccC
Q 031436           81 E-QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD--CNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        81 ~-~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~--~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      . +..++++|||.+........ ......++..|+|||.+.+..  ++.++|+||||+++ |+|++|+.||...
T Consensus       157 ~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il-~~l~~g~~pf~~~  228 (295)
T 2clq_A          157 TYSGVLKISDFGTSKRLAGINP-CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTI-IEMATGKPPFYEL  228 (295)
T ss_dssp             TTTCCEEECCTTTCEESCC------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHH-HHHHHTSCTTGGG
T ss_pred             CCCCCEEEeecccccccCCCCC-cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHH-HHHHHCCCCccCC
Confidence            7 78999999998876543221 122345788999999987643  78999999999999 9999999999754

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.95  E-value=5.4e-29  Score=178.96  Aligned_cols=142  Identities=23%  Similarity=0.384  Sum_probs=118.4

Q ss_pred             CeEEEEEecCC--CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLETE--NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      |++++++...+  ..+++|||+++++|.+.+...+    ..+++..+..++.|++.|+.+||   +.+++|+||+|.||+
T Consensus       105 v~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIl  177 (326)
T 2w1i_A          105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNIL  177 (326)
T ss_dssp             CCEEEEECC----CCEEEECCCTTCBHHHHHHHST----TSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEE
T ss_pred             eeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEE
Confidence            46788886643  7899999999999999987643    45788889999999999999999   899999999999999


Q ss_pred             ecCCCceEEEecCCCcccCCCccee--eeeecccccccCccccccCCCCCCcceEeccccccCcceeccccccc
Q 031436           79 FQEQSVAKLFDFSYSESIPEGETRI--RGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        79 ~~~~~~~~l~d~~~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      ++.+..++++|||++..........  .....++..|+|||.+.+..++.++|+||||+++ ++|++|..|+..
T Consensus       178 i~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~el~tg~~~~~~  250 (326)
T 2w1i_A          178 VENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL-YELFTYIEKSKS  250 (326)
T ss_dssp             EEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHH-HHHHHTTCGGGS
T ss_pred             EcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHH-HHHHhcCCCCCC
Confidence            9999999999999987665433211  1223456679999999888899999999999999 999999988864

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.95  E-value=3.2e-29  Score=182.77  Aligned_cols=140  Identities=20%  Similarity=0.280  Sum_probs=113.6

Q ss_pred             CeEEEEEecCC----CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCC-CeEEecCCCC
Q 031436            1 MRLIGCCLETE----NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR-PIVFRNVKPS   75 (159)
Q Consensus         1 v~l~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~-~~~h~~l~~~   75 (159)
                      +++++++...+    ..++++|++ +++|.+.+.....   ..++...+..++.|++.|+.|||   ++ +++|+||||+
T Consensus        89 ~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~  161 (373)
T 1q8y_A           89 LKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEH---RGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPE  161 (373)
T ss_dssp             CCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGG
T ss_pred             HHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhc---cCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChH
Confidence            35667776543    678999999 8899999876432   45888899999999999999999   77 9999999999


Q ss_pred             CEEecC------CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccc
Q 031436           76 NILFQE------QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYR  149 (159)
Q Consensus        76 nil~~~------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~  149 (159)
                      ||+++.      ...+|++|||++.......    ....++..|+|||.+.+..++.++|+||||+++ |+|++|+.||.
T Consensus       162 NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il-~el~~g~~pf~  236 (373)
T 1q8y_A          162 NVLMEIVDSPENLIQIKIADLGNACWYDEHY----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLI-FELITGDFLFE  236 (373)
T ss_dssp             GEEEEEEETTTTEEEEEECCCTTCEETTBCC----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHH-HHHHHSSCCC-
T ss_pred             HeEEeccCCCcCcceEEEcccccccccCCCC----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHH-HHHHhCCCCCC
Confidence            999953      3378999999987654322    123578899999999999999999999999999 99999999998


Q ss_pred             cCC
Q 031436          150 SED  152 (159)
Q Consensus       150 ~~~  152 (159)
                      +.+
T Consensus       237 ~~~  239 (373)
T 1q8y_A          237 PDE  239 (373)
T ss_dssp             ---
T ss_pred             CCc
Confidence            654

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.95  E-value=8.7e-29  Score=180.04  Aligned_cols=141  Identities=19%  Similarity=0.272  Sum_probs=110.5

Q ss_pred             CeEEEEEec-----CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC
Q 031436            1 MRLIGCCLE-----TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS   75 (159)
Q Consensus         1 v~l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~   75 (159)
                      |++++++..     ....++||||+. |+|.+.+...+    ..+++..+..++.|++.|+.|||   +++++|+||+|.
T Consensus        92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~  163 (362)
T 3pg1_A           92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR----IVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPG  163 (362)
T ss_dssp             CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGG
T ss_pred             cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChH
Confidence            456777743     235789999997 69988887542    46889999999999999999999   899999999999


Q ss_pred             CEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCC
Q 031436           76 NILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        76 nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ||+++.+..+|++|||++........  .....++..|+|||.+.+ ..++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       164 NIl~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il-~~l~~g~~pf~~~~  238 (362)
T 3pg1_A          164 NILLADNNDITICDFNLAREDTADAN--KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVM-AEMFNRKALFRGST  238 (362)
T ss_dssp             GEEECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHH-HHHHHSSCSCCCSS
T ss_pred             HEEEcCCCCEEEEecCcccccccccc--cceecccceecCcHHhcCCCCCCcHhHHHhHHHHH-HHHHhCCCCCCCCC
Confidence            99999999999999999875433222  223457888999999877 6789999999999999 99999999998754

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.95  E-value=1.9e-29  Score=179.18  Aligned_cols=143  Identities=17%  Similarity=0.249  Sum_probs=117.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+++..+++|||+++++|.+.+....    ..+++..+..++.|++.|+.|||   +.+++|+||+|.||+++
T Consensus        79 ~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~  151 (302)
T 2j7t_A           79 VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELD----RGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMT  151 (302)
T ss_dssp             CCEEEEEECC-CEEEEEECCTTEEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEC
T ss_pred             eeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEC
Confidence            578999999999999999999999998876532    45788999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccc-----cCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA-----TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~-----~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..++++|||++........ ......++..|+|||.+.     +..++.++|+||||+++ ++|++|..||...+
T Consensus       152 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il-~~l~~g~~p~~~~~  226 (302)
T 2j7t_A          152 LEGDIRLADFGVSAKNLKTLQ-KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITL-IEMAQIEPPHHELN  226 (302)
T ss_dssp             TTSCEEECCCHHHHHHHHHHH-C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHH-HHHHHSSCTTTTSC
T ss_pred             CCCCEEEEECCCCcccccccc-ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHH-HHHhcCCCCCccCC
Confidence            999999999997643221111 112345788899999983     56789999999999999 99999999998654

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.95  E-value=8.3e-29  Score=184.40  Aligned_cols=146  Identities=21%  Similarity=0.260  Sum_probs=110.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCC--CccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNF--EPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      |++++++.+++..+++|||+. |+|.+.+........  ....+..+..++.|++.|+.|||   +++++||||||+||+
T Consensus        72 v~~~~~~~~~~~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NIL  147 (434)
T 2rio_A           72 IRYYCSETTDRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNIL  147 (434)
T ss_dssp             CCEEEEEECSSEEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEE
T ss_pred             CeEEEEEecCCeEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEE
Confidence            578999999999999999995 699999976432111  11233456779999999999999   899999999999999


Q ss_pred             ecCC-------------CceEEEecCCCcccCCCcce---eeeeecccccccCcccccc-------CCCCCCcceEeccc
Q 031436           79 FQEQ-------------SVAKLFDFSYSESIPEGETR---IRGRVMGTFGYLPPEYIAT-------GDCNEKCDVYSFDG  135 (159)
Q Consensus        79 ~~~~-------------~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~-------~~~~~~~DvwS~g~  135 (159)
                      ++..             ..+|++|||++.........   ......++..|+|||.+.+       ..++.++|+|||||
T Consensus       148 l~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~  227 (434)
T 2rio_A          148 VSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGC  227 (434)
T ss_dssp             EECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHH
T ss_pred             EecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHH
Confidence            9653             47999999998776543221   1123468899999999875       56899999999999


Q ss_pred             cccCccee-cccccccC
Q 031436          136 SRDSGHLT-GRAWYRSE  151 (159)
Q Consensus       136 ~~~~~~~~-g~~p~~~~  151 (159)
                      ++ |+|++ |+.||...
T Consensus       228 il-~ellt~g~~Pf~~~  243 (434)
T 2rio_A          228 VF-YYILSKGKHPFGDK  243 (434)
T ss_dssp             HH-HHHHTTSCCTTCST
T ss_pred             HH-HHHHhCCCCCCCCc
Confidence            99 99998 99999764

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.95  E-value=1.6e-28  Score=179.47  Aligned_cols=136  Identities=21%  Similarity=0.342  Sum_probs=113.2

Q ss_pred             CeEEEEEecCCCc------eEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCLETENP------VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~~~~~------~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      |++++++...+..      +++|||+. ++|.+.+.       ..+++..+..++.|++.|+.|||   +++++|+||+|
T Consensus       104 v~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp  172 (371)
T 4exu_A          104 IGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMG-------MEFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKP  172 (371)
T ss_dssp             CCCSEEECSCSSSTTCCCCEEEEECCC-EEHHHHTT-------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             hhhhhheeccCCcccceeEEEEEcccc-ccHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCH
Confidence            4677888776654      99999996 68887773       34788999999999999999999   89999999999


Q ss_pred             CCEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCC
Q 031436           75 SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        75 ~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +||+++.+..+|++|||++.......    ....++..|+|||.+.+ ..++.++|+||+|+++ ++|++|+.||.+.+
T Consensus       173 ~NIll~~~~~~kL~Dfg~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il-~el~~g~~pf~~~~  246 (371)
T 4exu_A          173 GNLAVNEDCELKILDFGLARHADAEM----TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIM-AEMLTGKTLFKGKD  246 (371)
T ss_dssp             GGEEECTTCCEEECSTTCC------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHH-HHHHHSSCSCCCSS
T ss_pred             HHeEECCCCCEEEEecCcccccccCc----CCcccCccccCHHHhcCCCCCCcHHhHHHHHHHH-HHHHhCCCCCCCCC
Confidence            99999999999999999887553321    23457889999999887 6789999999999999 99999999998765

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.95  E-value=1.2e-28  Score=179.70  Aligned_cols=143  Identities=17%  Similarity=0.280  Sum_probs=117.2

Q ss_pred             CeEEEEEecC-----CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC
Q 031436            1 MRLIGCCLET-----ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS   75 (159)
Q Consensus         1 v~l~~~~~~~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~   75 (159)
                      |++++++...     ...++++|++. |+|.+.+..      ..++...+..++.|++.|+.|||   +++++|+||+|+
T Consensus        88 v~~~~~~~~~~~~~~~~~~iv~e~~~-~~L~~~l~~------~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~  157 (364)
T 3qyz_A           88 IGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKT------QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPS  157 (364)
T ss_dssp             CCCCEEECCSSTTTCCCEEEEEECCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGG
T ss_pred             ccceeEEecCCccccceEEEEEcccC-cCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChH
Confidence            4567777544     36789999996 699998864      34788899999999999999999   899999999999


Q ss_pred             CEEecCCCceEEEecCCCcccCCCccee--eeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCC
Q 031436           76 NILFQEQSVAKLFDFSYSESIPEGETRI--RGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        76 nil~~~~~~~~l~d~~~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ||+++.+..+|++|||++..........  .....+++.|+|||.+.+ ..++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       158 NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il-~ell~g~~pf~~~~  236 (364)
T 3qyz_A          158 NLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL-AEMLSNRPIFPGKH  236 (364)
T ss_dssp             GEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             hEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHH-HHHHHCCCCCCCCC
Confidence            9999999999999999987654322111  123467889999998654 4589999999999999 99999999998765


Q ss_pred             Cc
Q 031436          153 WK  154 (159)
Q Consensus       153 ~~  154 (159)
                      ..
T Consensus       237 ~~  238 (364)
T 3qyz_A          237 YL  238 (364)
T ss_dssp             GG
T ss_pred             hH
Confidence            43

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.95  E-value=1.2e-29  Score=178.46  Aligned_cols=146  Identities=21%  Similarity=0.301  Sum_probs=118.0

Q ss_pred             CeEEEEEe--cCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCC-----eEEecCC
Q 031436            1 MRLIGCCL--ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRP-----IVFRNVK   73 (159)
Q Consensus         1 v~l~~~~~--~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~-----~~h~~l~   73 (159)
                      |++++++.  .++..+++|||+++++|.+.+..... ....+++..+..++.|++.|+.+||   +.+     ++|+||+
T Consensus        68 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~  143 (279)
T 2w5a_A           68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLK  143 (279)
T ss_dssp             CCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCS
T ss_pred             CeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccc
Confidence            46788774  35678999999999999998865321 1145888999999999999999999   777     9999999


Q ss_pred             CCCEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           74 PSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        74 ~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      |+||+++.+..+|++|||.+......... .....++..|+|||.+.+..++.++|+||||+++ |+|++|+.||...+
T Consensus       144 p~NIl~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~g~~p~~~~~  220 (279)
T 2w5a_A          144 PANVFLDGKQNVKLGDFGLARILNHDTSF-AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLL-YELCALMPPFTAFS  220 (279)
T ss_dssp             GGGEEECSSSCEEECCCCHHHHC---CHH-HHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             hhhEEEcCCCCEEEecCchheeecccccc-ccccCCCccccChHHhccCCCCchhhHHHHHHHH-HHHHHCCCCCcccC
Confidence            99999999999999999987665432211 1223578889999999988899999999999999 99999999998754

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.95  E-value=8e-29  Score=177.77  Aligned_cols=139  Identities=22%  Similarity=0.270  Sum_probs=118.9

Q ss_pred             CeEEEEEecCCCceEEEEecCC-CChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe
Q 031436            1 MRLIGCCLETENPVLVFEYVEY-GTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~   79 (159)
                      +++++++.+++..++++|++.+ ++|.+.+...     ..+++..+..++.|++.|+.|||   +++++|+||+|+||++
T Consensus       111 ~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll  182 (320)
T 3a99_A          111 IRLLDWFERPDSFVLILERPEPVQDLFDFITER-----GALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILI  182 (320)
T ss_dssp             CCEEEEEECSSEEEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEE
T ss_pred             eEEEEEEecCCcEEEEEEcCCCCccHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEE
Confidence            5788999999999999999975 8999988753     45788899999999999999999   8999999999999999


Q ss_pred             c-CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCC-CCCcceEeccccccCcceecccccccC
Q 031436           80 Q-EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC-NEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        80 ~-~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~-~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      + .+..+|++|||++........   ....++..|+|||.+.+..+ +.++|+||||+++ |+|++|+.||...
T Consensus       183 ~~~~~~~kL~Dfg~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il-~el~~g~~pf~~~  252 (320)
T 3a99_A          183 DLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL-YDMVCGDIPFEHD  252 (320)
T ss_dssp             ETTTTEEEECCCTTCEECCSSCB---CCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHH-HHHHHSSCSCCSH
T ss_pred             eCCCCCEEEeeCccccccccccc---cCCCCCccCCChHHhccCCCCCccchHHhHHHHH-HHHHHCCCCCCCh
Confidence            8 678999999999876643222   22457888999999887665 6889999999999 9999999999653

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.94  E-value=5.7e-29  Score=178.78  Aligned_cols=144  Identities=22%  Similarity=0.279  Sum_probs=102.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCC-CeEEecCCCCCEEe
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR-PIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~-~~~h~~l~~~nil~   79 (159)
                      |++++++.+++..+++|||+. ++|.+.+..........+++..+..++.|++.|+.+||   +. +++|+||+|.||++
T Consensus        84 v~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll  159 (327)
T 3aln_A           84 VQFYGALFREGDCWICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILL  159 (327)
T ss_dssp             CCEEEEEECSSEEEEEECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEE
T ss_pred             eeeeeEEEeCCceEEEEeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEE
Confidence            578999999999999999997 58887765311111156788899999999999999999   77 99999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcceeeeeecccccccCcccc----ccCCCCCCcceEeccccccCcceecccccccC
Q 031436           80 QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI----ATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~----~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      +.+..+|++|||++........  .....++..|+|||.+    .+..++.++|+||||+++ ++|++|+.||...
T Consensus       160 ~~~~~~kl~Dfg~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il-~~l~~g~~pf~~~  232 (327)
T 3aln_A          160 DRSGNIKLCDFGISGQLVDSIA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITL-YELATGRFPYPKW  232 (327)
T ss_dssp             ETTTEEEECCCSSSCC--------------------------------CCSHHHHHHHHHHH-HHHHHSCCCSSCC
T ss_pred             cCCCCEEEccCCCceecccccc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHH-HHHHHCCCCCCCc
Confidence            9999999999999876543322  1223578889999998    456689999999999999 9999999999764

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.94  E-value=4e-28  Score=172.65  Aligned_cols=144  Identities=20%  Similarity=0.313  Sum_probs=115.5

Q ss_pred             CeEEEEEe--cCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCL--ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~--~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      +++++++.  +++..+++|||+.++ +.+.+.....   ..+++..+..++.|++.|+.|||   +++++|+||+|.||+
T Consensus        69 ~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~---~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl  141 (305)
T 2wtk_C           69 IQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPE---KRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLL  141 (305)
T ss_dssp             CCEEEEEECC---CEEEEEECCSEE-HHHHHHHSTT---CSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEE
T ss_pred             eEEEEEEEcCCCCeEEEEehhccCC-HHHHHHhCcc---cccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEE
Confidence            56788884  456789999999764 7777665332   56888999999999999999999   899999999999999


Q ss_pred             ecCCCceEEEecCCCcccCCCc-ceeeeeecccccccCccccccCC--CCCCcceEeccccccCcceecccccccCC
Q 031436           79 FQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYLPPEYIATGD--CNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        79 ~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~ape~~~~~~--~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ++.+..++++|||.+....... ........++..|+|||.+.+..  ++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       142 ~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il-~~l~~g~~p~~~~~  217 (305)
T 2wtk_C          142 LTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTL-YNITTGLYPFEGDN  217 (305)
T ss_dssp             ECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHH-HHHHHSSCSCCCSS
T ss_pred             EcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHH-HHHHhCCCCCCCch
Confidence            9999999999999987654321 11222345788999999987654  37799999999999 99999999998754

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.94  E-value=9.8e-29  Score=177.68  Aligned_cols=145  Identities=20%  Similarity=0.242  Sum_probs=102.2

Q ss_pred             CeEEEEEe--------cCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCC--eEEe
Q 031436            1 MRLIGCCL--------ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRP--IVFR   70 (159)
Q Consensus         1 v~l~~~~~--------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~--~~h~   70 (159)
                      |++++++.        .....++++||+. |+|.+.+.....  ...+++..+..++.|++.|+.|||   +.+  ++|+
T Consensus        89 v~~~~~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~  162 (337)
T 3ll6_A           89 VQFCSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMES--RGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHR  162 (337)
T ss_dssp             CCEEEEEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHT--TCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCC
T ss_pred             hhccccccccccccccCCceEEEEEEecC-CCHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEc
Confidence            46778873        2334789999995 799988764211  145889999999999999999999   888  9999


Q ss_pred             cCCCCCEEecCCCceEEEecCCCcccCCCcce-----------eeeeecccccccCcccc---ccCCCCCCcceEecccc
Q 031436           71 NVKPSNILFQEQSVAKLFDFSYSESIPEGETR-----------IRGRVMGTFGYLPPEYI---ATGDCNEKCDVYSFDGS  136 (159)
Q Consensus        71 ~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-----------~~~~~~~~~~~~ape~~---~~~~~~~~~DvwS~g~~  136 (159)
                      ||+|+||+++.+..+|++|||++.........           ......++..|+|||.+   .+..++.++|+||||++
T Consensus       163 Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~i  242 (337)
T 3ll6_A          163 DLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCI  242 (337)
T ss_dssp             CCCGGGCEECTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHH
T ss_pred             cCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHH
Confidence            99999999999999999999998765432211           01133478889999998   56678899999999999


Q ss_pred             ccCcceecccccccCC
Q 031436          137 RDSGHLTGRAWYRSED  152 (159)
Q Consensus       137 ~~~~~~~g~~p~~~~~  152 (159)
                      + |+|++|+.||...+
T Consensus       243 l-~el~~g~~p~~~~~  257 (337)
T 3ll6_A          243 L-YLLCFRQHPFEDGA  257 (337)
T ss_dssp             H-HHHHHSSCCC----
T ss_pred             H-HHHHhCCCCCcchh
Confidence            9 99999999997654

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.94  E-value=2.6e-28  Score=176.10  Aligned_cols=144  Identities=22%  Similarity=0.284  Sum_probs=116.7

Q ss_pred             CeEEEEEecCC----CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcC-----CCCeEEec
Q 031436            1 MRLIGCCLETE----NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF-----SRPIVFRN   71 (159)
Q Consensus         1 v~l~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~-----~~~~~h~~   71 (159)
                      +++++++....    ..+++|||+++|+|.+.+..      ..+++..+..++.|++.|+.|||+..     +.+++|+|
T Consensus        99 ~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~D  172 (342)
T 1b6c_B           99 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRD  172 (342)
T ss_dssp             CCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSC
T ss_pred             EEEEeeecccCCccceeEEEEeecCCCcHHHHHhc------cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCC
Confidence            56788888765    78999999999999999964      34788899999999999999999210     36799999


Q ss_pred             CCCCCEEecCCCceEEEecCCCcccCCCcce---eeeeecccccccCccccccCC------CCCCcceEeccccccCcce
Q 031436           72 VKPSNILFQEQSVAKLFDFSYSESIPEGETR---IRGRVMGTFGYLPPEYIATGD------CNEKCDVYSFDGSRDSGHL  142 (159)
Q Consensus        72 l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~------~~~~~DvwS~g~~~~~~~~  142 (159)
                      |+|+||+++.+..+|++|||++.........   ......++..|+|||.+.+..      ++.++|+||||+++ |+|+
T Consensus       173 lkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il-~el~  251 (342)
T 1b6c_B          173 LKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF-WEIA  251 (342)
T ss_dssp             CSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHH-HHHH
T ss_pred             CCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHH-HHHH
Confidence            9999999999999999999998765443221   112345788999999987652      33689999999999 9999


Q ss_pred             ec----------ccccccC
Q 031436          143 TG----------RAWYRSE  151 (159)
Q Consensus       143 ~g----------~~p~~~~  151 (159)
                      +|          ..||...
T Consensus       252 tg~~~~~~~~~~~~p~~~~  270 (342)
T 1b6c_B          252 RRCSIGGIHEDYQLPYYDL  270 (342)
T ss_dssp             TTBCBTTBCCCCCCTTTTT
T ss_pred             hccCcCCcccccccCcccc
Confidence            99          6777654

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.94  E-value=2.7e-28  Score=176.79  Aligned_cols=141  Identities=18%  Similarity=0.239  Sum_probs=115.5

Q ss_pred             CeEEEEEecC-----CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC
Q 031436            1 MRLIGCCLET-----ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS   75 (159)
Q Consensus         1 v~l~~~~~~~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~   75 (159)
                      |++++++..+     ...++++||+. ++|.+.+..      ..++...+..++.|++.|+.|||   +++++|+||+|.
T Consensus        72 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~  141 (353)
T 2b9h_A           72 ITIFNIQRPDSFENFNEVYIIQELMQ-TDLHRVIST------QMLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPS  141 (353)
T ss_dssp             CCEEEECCCSCSTTCCCEEEEECCCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGG
T ss_pred             CCeeeeecccccCccceEEEEEeccC-ccHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHH
Confidence            4677777653     67899999996 699988864      35788899999999999999999   899999999999


Q ss_pred             CEEecCCCceEEEecCCCcccCCCcce---------eeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecc
Q 031436           76 NILFQEQSVAKLFDFSYSESIPEGETR---------IRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGR  145 (159)
Q Consensus        76 nil~~~~~~~~l~d~~~~~~~~~~~~~---------~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~  145 (159)
                      ||+++.+..+|++|||++.........         ......++..|+|||.+.+ ..++.++|+||+|+++ ++|++|+
T Consensus       142 Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il-~~l~~g~  220 (353)
T 2b9h_A          142 NLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCIL-AELFLRR  220 (353)
T ss_dssp             GEEECTTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHH-HHHHHSS
T ss_pred             HeEEcCCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHH-HHHHhCC
Confidence            999999999999999998765432111         0112356888999998764 6789999999999999 9999999


Q ss_pred             cccccCC
Q 031436          146 AWYRSED  152 (159)
Q Consensus       146 ~p~~~~~  152 (159)
                      .||.+.+
T Consensus       221 ~pf~~~~  227 (353)
T 2b9h_A          221 PIFPGRD  227 (353)
T ss_dssp             CSCCCSS
T ss_pred             CCCCCCC
Confidence            9998765

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.94  E-value=8.3e-28  Score=174.61  Aligned_cols=146  Identities=21%  Similarity=0.283  Sum_probs=114.5

Q ss_pred             CeEEEEEecCCC-------ceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCC
Q 031436            1 MRLIGCCLETEN-------PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK   73 (159)
Q Consensus         1 v~l~~~~~~~~~-------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~   73 (159)
                      |+++++|...+.       .+++|||+.+ ++.+.+..... ....++...+..++.|++.|+.|+|.. +.+++|+|||
T Consensus        82 v~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlk  158 (360)
T 3e3p_A           82 VQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYR-RQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIK  158 (360)
T ss_dssp             CCEEEEEEEECSSCTTCEEEEEEEECCSC-BHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCC
T ss_pred             ccHHHhhhccccccccceeEEEEeecccc-cHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCC
Confidence            567888865333       7899999975 66554432110 114577888889999999999999943 5789999999


Q ss_pred             CCCEEecC-CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCC-CCCCcceEeccccccCcceecccccccC
Q 031436           74 PSNILFQE-QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD-CNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        74 ~~nil~~~-~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      |+||+++. +..+||+|||++.........  ....++..|+|||.+.+.. ++.++|+||||+++ |+|++|+.||.+.
T Consensus       159 p~NIll~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il-~ell~g~~pf~~~  235 (360)
T 3e3p_A          159 PHNVLVNEADGTLKLCDFGSAKKLSPSEPN--VAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIF-AEMMLGEPIFRGD  235 (360)
T ss_dssp             GGGEEEETTTTEEEECCCTTCBCCCTTSCC--CSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHH-HHHHHSSCSSCCS
T ss_pred             HHHEEEeCCCCcEEEeeCCCceecCCCCCc--ccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHH-HHHHhCCCCcCCC
Confidence            99999986 789999999998766443321  2345788899999987654 89999999999999 9999999999876


Q ss_pred             C
Q 031436          152 D  152 (159)
Q Consensus       152 ~  152 (159)
                      +
T Consensus       236 ~  236 (360)
T 3e3p_A          236 N  236 (360)
T ss_dssp             S
T ss_pred             C
Confidence            4

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.94  E-value=5.6e-28  Score=175.39  Aligned_cols=137  Identities=21%  Similarity=0.344  Sum_probs=112.8

Q ss_pred             CeEEEEEecCCC------ceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCLETEN------PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~~~~------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      |++++++...+.      .+++|||+. ++|.+.+.       ..+++..+..++.|++.|+.|||   +++++|+||+|
T Consensus        86 v~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp  154 (353)
T 3coi_A           86 IGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMG-------LKFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKP  154 (353)
T ss_dssp             CCCSEEECSCSSGGGCCCCEEEEECCS-EEGGGTTT-------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCG
T ss_pred             ccHhheEecccccccceeEEEEecccc-CCHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCH
Confidence            456778876654      499999996 68877663       34788999999999999999999   89999999999


Q ss_pred             CCEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCCC
Q 031436           75 SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        75 ~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .||+++.++.+|++|||++.......    ....++..|+|||.+.+ ..++.++|+||+|+++ ++|++|+.||.+.+.
T Consensus       155 ~NIl~~~~~~~kl~Dfg~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il-~el~~g~~pf~~~~~  229 (353)
T 3coi_A          155 GNLAVNEDCELKILDFGLARHADAEM----TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIM-AEMLTGKTLFKGKDY  229 (353)
T ss_dssp             GGEEECTTCCEEECSTTCTTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHH-HHHHHSSCSSBSSCH
T ss_pred             HHEeECCCCcEEEeecccccCCCCCc----cccccCcCcCCHHHHhCcCCCCchhhHHHHHHHH-HHHHhCCCCCCCCCH
Confidence            99999999999999999887543221    22457888999999876 6789999999999999 999999999988653

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.94  E-value=4.5e-28  Score=171.27  Aligned_cols=140  Identities=27%  Similarity=0.393  Sum_probs=118.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +++++++.+.+..++++|++++++|.+.+...     ..+++..+..++.|++.|+.+||   +++++|+||+|.||+++
T Consensus        84 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~  155 (287)
T 2wei_A           84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLE  155 (287)
T ss_dssp             CCEEEEEECSSEEEEEECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEES
T ss_pred             cEEEEEEeCCCeEEEEEEccCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEe
Confidence            57889999999999999999999999887653     35788999999999999999999   89999999999999996


Q ss_pred             CC---CceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQ---SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+   ..+|++|||++.........  ....++..|+|||.+.+. ++.++|+||+|+++ ++|++|+.||.+.+
T Consensus       156 ~~~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l-~~l~~g~~p~~~~~  226 (287)
T 2wei_A          156 SKEKDCDIKIIDFGLSTCFQQNTKM--KDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVIL-YILLSGTPPFYGKN  226 (287)
T ss_dssp             CSSTTCCEEECSTTGGGTBCCCSSC--SCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             cCCCcccEEEeccCcceeecCCCcc--ccccCcccccChHHhcCC-CCCchhhHhHHHHH-HHHHhCCCCCCCCC
Confidence            54   46999999988765433221  223477889999998654 89999999999999 99999999997654

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.94  E-value=1.7e-27  Score=184.14  Aligned_cols=142  Identities=24%  Similarity=0.386  Sum_probs=119.3

Q ss_pred             CeEEEEEec------CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCLE------TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      |++++++..      ++..++||||+++|+|.+++.....  ...+++..+..++.|++.|+.|||   +.+++|+||+|
T Consensus        75 V~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~--~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP  149 (676)
T 3qa8_A           75 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFEN--CCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKP  149 (676)
T ss_dssp             CCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSC--TTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCS
T ss_pred             CceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCH
Confidence            456677654      6778999999999999999976432  135888899999999999999999   89999999999


Q ss_pred             CCEEecCCC---ceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceeccccccc
Q 031436           75 SNILFQEQS---VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        75 ~nil~~~~~---~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      .||+++.++   .++++|||.+........  .....++..|+|||.+.+..++.++|+||+|+++ |++++|+.||.+
T Consensus       150 ~NILl~~~g~~~~vKL~DFG~a~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviL-yeLltG~~Pf~~  225 (676)
T 3qa8_A          150 ENIVLQPGPQRLIHKIIDLGYAKELDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLA-FECITGFRPFLP  225 (676)
T ss_dssp             TTEEEECCSSSCEEEECSCCCCCBTTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHH-HHHHSSCSSCCS
T ss_pred             HHeEeecCCCceeEEEcccccccccccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHH-HHHHHCCCCCCc
Confidence            999998654   489999999876644322  2234678899999999999999999999999999 999999999965

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.94  E-value=1.7e-28  Score=175.49  Aligned_cols=145  Identities=22%  Similarity=0.330  Sum_probs=115.7

Q ss_pred             CeEEEEEe----cCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCC
Q 031436            1 MRLIGCCL----ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSN   76 (159)
Q Consensus         1 v~l~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~n   76 (159)
                      |++++++.    .....++++||+.+|+|.+.+..... ....+++..+..++.|++.|+.|||   +++++|+||+|+|
T Consensus        89 v~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~N  164 (317)
T 2buj_A           89 LRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTN  164 (317)
T ss_dssp             CCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGG
T ss_pred             eeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHH
Confidence            45677776    23467899999999999998875321 1256889999999999999999999   8999999999999


Q ss_pred             EEecCCCceEEEecCCCcccCCCcce--------eeeeecccccccCccccccCC---CCCCcceEeccccccCcceecc
Q 031436           77 ILFQEQSVAKLFDFSYSESIPEGETR--------IRGRVMGTFGYLPPEYIATGD---CNEKCDVYSFDGSRDSGHLTGR  145 (159)
Q Consensus        77 il~~~~~~~~l~d~~~~~~~~~~~~~--------~~~~~~~~~~~~ape~~~~~~---~~~~~DvwS~g~~~~~~~~~g~  145 (159)
                      |+++.+..++++|||.+.........        ......++..|+|||.+.+..   ++.++|+||||+++ |+|++|+
T Consensus       165 Il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il-~el~~g~  243 (317)
T 2buj_A          165 ILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVL-YAMMFGE  243 (317)
T ss_dssp             EEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHH-HHHHHSS
T ss_pred             EEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHH-HHHHhCC
Confidence            99999999999999987654321100        001223578899999987554   68999999999999 9999999


Q ss_pred             ccccc
Q 031436          146 AWYRS  150 (159)
Q Consensus       146 ~p~~~  150 (159)
                      .||..
T Consensus       244 ~p~~~  248 (317)
T 2buj_A          244 GPYDM  248 (317)
T ss_dssp             CTTHH
T ss_pred             CChhh
Confidence            99964

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.94  E-value=7.7e-28  Score=171.92  Aligned_cols=134  Identities=21%  Similarity=0.331  Sum_probs=108.6

Q ss_pred             ecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec-CCCceE
Q 031436            8 LETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ-EQSVAK   86 (159)
Q Consensus         8 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~-~~~~~~   86 (159)
                      .+.+..+++|||+. |+|.+.+..      ..++...+..++.|++.|+.|||   +++++|+||+|+||+++ .+..+|
T Consensus        92 ~~~~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~k  161 (320)
T 2i6l_A           92 TELNSVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLK  161 (320)
T ss_dssp             CSCSEEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEE
T ss_pred             cccCceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEE
Confidence            44567899999997 699998854      35788889999999999999999   89999999999999997 456899


Q ss_pred             EEecCCCcccCCCcc--eeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCC
Q 031436           87 LFDFSYSESIPEGET--RIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        87 l~d~~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ++|||++........  .......++..|+|||.+.+ ..++.++|+||||+++ |+|++|+.||.+.+
T Consensus       162 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il-~el~~g~~pf~~~~  229 (320)
T 2i6l_A          162 IGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIF-AEMLTGKTLFAGAH  229 (320)
T ss_dssp             ECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             EccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHH-HHHHhCCCCCCCCC
Confidence            999998876532211  11123345788999998865 6789999999999999 99999999998764

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.94  E-value=5.8e-28  Score=172.58  Aligned_cols=140  Identities=21%  Similarity=0.315  Sum_probs=112.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..+++||+. +++|.+.+...     ..+++..+..++.|++.|+.|||   +++++|+||+|.||+++
T Consensus        91 v~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~  161 (313)
T 3cek_A           91 IRLYDYEITDQYIYMVMECG-NIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV  161 (313)
T ss_dssp             CCEEEEEECSSEEEEEECCC-SEEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE
T ss_pred             EEEEEEeecCCEEEEEEecC-CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEE
Confidence            57889999999999999954 78999998754     45788889999999999999999   89999999999999996


Q ss_pred             CCCceEEEecCCCcccCCCcce-eeeeecccccccCcccccc-----------CCCCCCcceEeccccccCcceeccccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETR-IRGRVMGTFGYLPPEYIAT-----------GDCNEKCDVYSFDGSRDSGHLTGRAWY  148 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~-----------~~~~~~~DvwS~g~~~~~~~~~g~~p~  148 (159)
                      . +.+|++|||++......... ......++..|+|||.+.+           ..++.++|+||||+++ ++|++|+.||
T Consensus       162 ~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il-~el~~g~~pf  239 (313)
T 3cek_A          162 D-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL-YYMTYGKTPF  239 (313)
T ss_dssp             T-TEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHH-HHHHHSSCTT
T ss_pred             C-CeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHH-HHHHhCCCch
Confidence            4 78999999998765433221 1223457889999999875           4678899999999999 9999999999


Q ss_pred             ccC
Q 031436          149 RSE  151 (159)
Q Consensus       149 ~~~  151 (159)
                      ...
T Consensus       240 ~~~  242 (313)
T 3cek_A          240 QQI  242 (313)
T ss_dssp             TTC
T ss_pred             hhH
Confidence            764

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.94  E-value=3.7e-28  Score=173.47  Aligned_cols=138  Identities=25%  Similarity=0.305  Sum_probs=114.0

Q ss_pred             CeEEEEEecCCCceEEEEe-cCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe
Q 031436            1 MRLIGCCLETENPVLVFEY-VEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~   79 (159)
                      +++++++.+.+..++++|+ +.+++|.+.+...     ..+++..+..++.|++.|+.|||   +.+++|+||+|.||++
T Consensus       101 ~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~  172 (312)
T 2iwi_A          101 IRLLDWFETQEGFMLVLERPLPAQDLFDYITEK-----GPLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILI  172 (312)
T ss_dssp             CCEEEEC-----CEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEE
T ss_pred             eeEEEEEecCCeEEEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEE
Confidence            5788999988999999999 7889999998753     35788999999999999999999   8899999999999999


Q ss_pred             c-CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCC-CCcceEeccccccCcceeccccccc
Q 031436           80 Q-EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYSFDGSRDSGHLTGRAWYRS  150 (159)
Q Consensus        80 ~-~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~-~~~DvwS~g~~~~~~~~~g~~p~~~  150 (159)
                      + .+..++++|||++........   ....++..|+|||.+.+..+. .++|+||+|+++ |++++|+.||..
T Consensus       173 ~~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il-~~l~~g~~pf~~  241 (312)
T 2iwi_A          173 DLRRGCAKLIDFGSGALLHDEPY---TDFDGTRVYSPPEWISRHQYHALPATVWSLGILL-YDMVCGDIPFER  241 (312)
T ss_dssp             ETTTTEEEECCCSSCEECCSSCB---CCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHH-HHHHHSSCSCCS
T ss_pred             eCCCCeEEEEEcchhhhcccCcc---cccCCcccccCceeeecCCCCCccchHHHHHHHH-HHHHHCCCCCCC
Confidence            8 778899999998876644322   234578889999998776654 589999999999 999999999965

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.94  E-value=8.1e-28  Score=187.67  Aligned_cols=133  Identities=24%  Similarity=0.371  Sum_probs=111.9

Q ss_pred             CeEEEEEecCCC-----ceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC
Q 031436            1 MRLIGCCLETEN-----PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS   75 (159)
Q Consensus         1 v~l~~~~~~~~~-----~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~   75 (159)
                      |+++++|.+.+.     .|+||||+++++|.+.+.       ..+++.++..++.|++.++.|+|   +++++||||||.
T Consensus       142 v~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~-------~~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~  211 (681)
T 2pzi_A          142 VQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKG-------QKLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPE  211 (681)
T ss_dssp             CCEEEEEEEECTTSCEEEEEEEECCCCEECC-----------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGG
T ss_pred             CeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChH
Confidence            578899987665     699999999999987653       25788999999999999999999   899999999999


Q ss_pred             CEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           76 NILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        76 nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      ||+++.+ .+|++|||++......     ....+++.|+|||.+.+. ++.++|+||||+++ ++|++|..||.+.
T Consensus       212 NIll~~~-~~kl~DFG~a~~~~~~-----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l-~~l~~g~~~~~~~  279 (681)
T 2pzi_A          212 NIMLTEE-QLKLIDLGAVSRINSF-----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTL-AALTLDLPTRNGR  279 (681)
T ss_dssp             GEEECSS-CEEECCCTTCEETTCC-----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHH-HHHHSCCCEETTE
T ss_pred             HeEEeCC-cEEEEecccchhcccC-----CccCCCccccCHHHHcCC-CCCceehhhhHHHH-HHHHhCCCCCccc
Confidence            9999876 7999999998766433     234588999999998765 48899999999999 9999999998764

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.94  E-value=7.3e-28  Score=172.09  Aligned_cols=140  Identities=25%  Similarity=0.397  Sum_probs=108.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCC-CeEEecCCCCCEEe
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR-PIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~-~~~h~~l~~~nil~   79 (159)
                      +++++++.+++..+++|||+ ++.+........    ..+++..+..++.|++.|+.|||   ++ +++|+||+|+||++
T Consensus        87 ~~~~~~~~~~~~~~lv~e~~-~~~~~~l~~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~  158 (318)
T 2dyl_A           87 VQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQ----GPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILL  158 (318)
T ss_dssp             CCEEEEEECSSEEEEEECCC-SEEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEE
T ss_pred             eeEEEEEecCCcEEEEEecc-CCcHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEE
Confidence            57899999999999999999 556655554322    45788899999999999999999   74 99999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcceeeeeecccccccCccccc-----cCCCCCCcceEeccccccCcceecccccccC
Q 031436           80 QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA-----TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~-----~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      +.+..+|++|||++........  .....++..|+|||.+.     ...++.++|+||||+++ ++|++|+.||...
T Consensus       159 ~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il-~~l~~g~~pf~~~  232 (318)
T 2dyl_A          159 DERGQIKLCDFGISGRLVDDKA--KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISL-VELATGQFPYKNC  232 (318)
T ss_dssp             CTTSCEEECCCTTC----------------CCTTCCHHHHC--------CCTHHHHHHHHHHH-HHHHHSSCTTTTC
T ss_pred             CCCCCEEEEECCCchhccCCcc--ccccCCCccccChhhcccccccccCCccccchhhHHHHH-HHHHhCCCCCCCC
Confidence            9999999999998866543222  12345788999999984     45688999999999999 9999999999763

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.94  E-value=2e-27  Score=168.44  Aligned_cols=126  Identities=25%  Similarity=0.336  Sum_probs=100.8

Q ss_pred             CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEe
Q 031436           10 TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFD   89 (159)
Q Consensus        10 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d   89 (159)
                      .+..+++|||+++++|.+.+....    ..++...+..++.|++.|+.|||   +++++|+||+|+||+++.+..++++|
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~d  159 (303)
T 1zy4_A           87 KSTLFIQMEYCENGTLYDLIHSEN----LNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGD  159 (303)
T ss_dssp             EEEEEEEEECCCSCBHHHHHHHSC----GGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECC
T ss_pred             CCceEEEEecCCCCCHHHhhhccc----cccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEee
Confidence            456789999999999999997532    45677888899999999999999   89999999999999999999999999


Q ss_pred             cCCCcccCCCc-------------ceeeeeecccccccCccccccC-CCCCCcceEeccccccCccee
Q 031436           90 FSYSESIPEGE-------------TRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLT  143 (159)
Q Consensus        90 ~~~~~~~~~~~-------------~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~  143 (159)
                      ||.+.......             ........++..|+|||.+.+. .++.++|+||+|+++ |+|++
T Consensus       160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il-~~l~~  226 (303)
T 1zy4_A          160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIF-FEMIY  226 (303)
T ss_dssp             CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHH-HHHHS
T ss_pred             CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHH-HHHHh
Confidence            99887654221             1111234578889999999765 689999999999999 99987

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.93  E-value=3.6e-28  Score=175.33  Aligned_cols=127  Identities=13%  Similarity=0.171  Sum_probs=107.2

Q ss_pred             CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCC------
Q 031436           10 TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQS------   83 (159)
Q Consensus        10 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~------   83 (159)
                      ++..++||||+++|++.+.+..      ..+++..+..++.|++.|+.|||+  +++++||||||+||+++.++      
T Consensus       134 ~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~~aL~~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~  205 (336)
T 2vuw_A          134 DDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLTASLAVAEA--SLRFEHRDLHWGNVLLKKTSLKKLHY  205 (336)
T ss_dssp             TTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHHHHHHHHHH--HHCCBCSCCCGGGEEEEECSCSEEEE
T ss_pred             cCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHH--hCCEeECCCCHHHEEEeccCCcceee
Confidence            6789999999999977776643      357889999999999999999993  37899999999999998876      


Q ss_pred             --------------ceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccc
Q 031436           84 --------------VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYR  149 (159)
Q Consensus        84 --------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~  149 (159)
                                    .+||+|||++......      ...++..|+|||.+.+.. +.++|+||++++..+++++|..||.
T Consensus       206 ~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~  278 (336)
T 2vuw_A          206 TLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYS  278 (336)
T ss_dssp             EETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred             eccCccccccCCCceEEEeeccccEecCCC------cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCc
Confidence                          8999999998765432      235889999999998776 8899999998884499999999997


Q ss_pred             cC
Q 031436          150 SE  151 (159)
Q Consensus       150 ~~  151 (159)
                      ..
T Consensus       279 ~~  280 (336)
T 2vuw_A          279 NV  280 (336)
T ss_dssp             HH
T ss_pred             ch
Confidence            63

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.93  E-value=1e-27  Score=177.58  Aligned_cols=132  Identities=13%  Similarity=0.118  Sum_probs=106.5

Q ss_pred             CceEEEEecCCCChHHHhhCCC--CCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEe
Q 031436           12 NPVLVFEYVEYGTLADRIYHPR--QPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFD   89 (159)
Q Consensus        12 ~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d   89 (159)
                      ..+++|+.+ +++|.+++....  ......+++..+..++.|++.|+.|||   +++++||||||+||+++.++.+||+|
T Consensus       179 ~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~iiHrDiKp~NILl~~~~~~kL~D  254 (413)
T 3dzo_A          179 SRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTG  254 (413)
T ss_dssp             SEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECC
T ss_pred             ceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcccceEEEecCCeEEEEe
Confidence            456777777 679998885210  011256778888899999999999999   89999999999999999999999999


Q ss_pred             cCCCcccCCCcceeeeeecccccccCcccc----------ccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           90 FSYSESIPEGETRIRGRVMGTFGYLPPEYI----------ATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~ape~~----------~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      ||++......    .....+ ..|+|||.+          .+..++.++|+||||+++ |+|++|+.||...+.
T Consensus       255 FG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil-~elltg~~Pf~~~~~  322 (413)
T 3dzo_A          255 FEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI-YWIWCADLPNTDDAA  322 (413)
T ss_dssp             GGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH-HHHHHSSCCCCTTGG
T ss_pred             ccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH-HHHHHCCCCCCCcch
Confidence            9997754322    223456 889999999          555688899999999999 999999999987643

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.92  E-value=1.6e-26  Score=164.31  Aligned_cols=122  Identities=26%  Similarity=0.409  Sum_probs=103.1

Q ss_pred             CeEEEEEec----CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCC
Q 031436            1 MRLIGCCLE----TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSN   76 (159)
Q Consensus         1 v~l~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~n   76 (159)
                      +++++++..    ++..+++|||+++|+|.+.+.....   ..+++..+..++.|++.|+.|||   +.+++|+||+|+|
T Consensus        74 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~N  147 (299)
T 3m2w_A           74 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN  147 (299)
T ss_dssp             CCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGG
T ss_pred             hhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHH
Confidence            467787766    6678999999999999999876432   46889999999999999999999   8999999999999


Q ss_pred             EEecC---CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           77 ILFQE---QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        77 il~~~---~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      |+++.   +..++++|||++....                       +..++.++|+||+|+++ |+|++|+.||.+.+
T Consensus       148 il~~~~~~~~~~kl~Dfg~a~~~~-----------------------~~~~~~~~DiwslG~il-~el~tg~~pf~~~~  202 (299)
T 3m2w_A          148 LLYTSKRPNAILKLTDFGFAKETT-----------------------GEKYDKSCDMWSLGVIM-YILLCGYPPFYSNH  202 (299)
T ss_dssp             EEESSSSTTCCEEECCCTTCEECT-----------------------TCGGGGHHHHHHHHHHH-HHHHHSSCSCCC--
T ss_pred             EEEecCCCCCcEEEeccccccccc-----------------------cccCCchhhHHHHHHHH-HHHHHCCCCCCCCc
Confidence            99987   6789999999765332                       23467889999999999 99999999997653

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.91  E-value=2.6e-25  Score=157.43  Aligned_cols=115  Identities=15%  Similarity=0.130  Sum_probs=97.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++||||+++++|.+++...       ....+...++.|++.|+.|||   +++++||||||+||+++
T Consensus        94 v~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~  163 (286)
T 3uqc_A           94 ARVLDVVHTRAGGLVVAEWIRGGSLQEVADTS-------PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVS  163 (286)
T ss_dssp             CCEEEEEEETTEEEEEEECCCEEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEE
T ss_pred             ceeeEEEEECCcEEEEEEecCCCCHHHHHhcC-------CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEc
Confidence            57899999999999999999999999998532       234467789999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCCc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWK  154 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~  154 (159)
                      .++.+|+++.+                     |++       .++.++|+||||+++ |+|++|+.||.+.+..
T Consensus       164 ~~g~~kl~~~~---------------------~~~-------~~~~~~Di~slG~il-~elltg~~Pf~~~~~~  208 (286)
T 3uqc_A          164 IDGDVVLAYPA---------------------TMP-------DANPQDDIRGIGASL-YALLVNRWPLPEAGVR  208 (286)
T ss_dssp             TTSCEEECSCC---------------------CCT-------TCCHHHHHHHHHHHH-HHHHHSEECSCCCSBC
T ss_pred             CCCCEEEEecc---------------------ccC-------CCCchhHHHHHHHHH-HHHHHCCCCCCcCCcc
Confidence            99888887432                     122       368999999999999 9999999999886543

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.81  E-value=4.8e-22  Score=151.53  Aligned_cols=126  Identities=18%  Similarity=0.212  Sum_probs=99.9

Q ss_pred             EEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCC
Q 031436            4 IGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQS   83 (159)
Q Consensus         4 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~   83 (159)
                      ..++...+..++||||+++++|.+.+..             ...++.|++.++.|||   +++++||||||+||+++.  
T Consensus       405 ~~~~~~~~~~~lVmE~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--  466 (540)
T 3en9_A          405 YIFDVDLDNKRIMMSYINGKLAKDVIED-------------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--  466 (540)
T ss_dssp             CEEEEETTTTEEEEECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--
T ss_pred             EEEEEeCCccEEEEECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--
Confidence            4455567788999999999999998853             3368999999999999   899999999999999998  


Q ss_pred             ceEEEecCCCcccCCCccee------eeeecccccccCcccccc--CCCCCCcceEeccccccCcceeccccc
Q 031436           84 VAKLFDFSYSESIPEGETRI------RGRVMGTFGYLPPEYIAT--GDCNEKCDVYSFDGSRDSGHLTGRAWY  148 (159)
Q Consensus        84 ~~~l~d~~~~~~~~~~~~~~------~~~~~~~~~~~ape~~~~--~~~~~~~DvwS~g~~~~~~~~~g~~p~  148 (159)
                      .+|++|||+++.........      .....+++.|+|||++..  ..|+..+|+||...-. .+-+.++.+|
T Consensus       467 ~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~-l~~v~~r~rY  538 (540)
T 3en9_A          467 DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILEL-MKDVERRARY  538 (540)
T ss_dssp             SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHH-HHHHHTCSCC
T ss_pred             eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHhcccc
Confidence            89999999998775432211      124568999999999976  5678888999986665 5555555544

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.62  E-value=8.3e-17  Score=113.60  Aligned_cols=76  Identities=17%  Similarity=0.144  Sum_probs=62.5

Q ss_pred             EEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCC
Q 031436            3 LIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQ   82 (159)
Q Consensus         3 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~   82 (159)
                      +.+++. .+..++||||+++++|.+ +..           .....++.|++.|+.++|   +.+++||||||.||+++ +
T Consensus       166 v~~~~~-~~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~-~  228 (282)
T 1zar_A          166 VPKVYA-WEGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS-E  228 (282)
T ss_dssp             SCCEEE-EETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE-T
T ss_pred             cCeEEe-ccceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE-C
Confidence            344443 366799999999999987 421           123468999999999999   89999999999999999 8


Q ss_pred             CceEEEecCCCcc
Q 031436           83 SVAKLFDFSYSES   95 (159)
Q Consensus        83 ~~~~l~d~~~~~~   95 (159)
                      +.++++|||++..
T Consensus       229 ~~vkl~DFG~a~~  241 (282)
T 1zar_A          229 EGIWIIDFPQSVE  241 (282)
T ss_dssp             TEEEECCCTTCEE
T ss_pred             CcEEEEECCCCeE
Confidence            8999999998753

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.33  E-value=3.2e-12  Score=88.96  Aligned_cols=74  Identities=15%  Similarity=0.178  Sum_probs=58.7

Q ss_pred             CCceEEEEecCC-C----ChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCce
Q 031436           11 ENPVLVFEYVEY-G----TLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVA   85 (159)
Q Consensus        11 ~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~   85 (159)
                      +..++||||+.+ |    +|.+....        .++.....++.|++.++.+||.  +.+++|||++|.||+++.  .+
T Consensus       141 ~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~--~~givHrDlkp~NILl~~--~~  208 (258)
T 1zth_A          141 MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQ--EAELVHADLSEYNIMYID--KV  208 (258)
T ss_dssp             ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHH--TSCEECSSCSTTSEEESS--SE
T ss_pred             CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHH--HCCEEeCCCCHHHEEEcC--cE
Confidence            356899999942 3    56554421        2345667899999999999994  578999999999999988  89


Q ss_pred             EEEecCCCccc
Q 031436           86 KLFDFSYSESI   96 (159)
Q Consensus        86 ~l~d~~~~~~~   96 (159)
                      +++|||++...
T Consensus       209 ~liDFG~a~~~  219 (258)
T 1zth_A          209 YFIDMGQAVTL  219 (258)
T ss_dssp             EECCCTTCEET
T ss_pred             EEEECcccccC
Confidence            99999998655

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.04  E-value=1.1e-10  Score=85.37  Aligned_cols=69  Identities=14%  Similarity=0.142  Sum_probs=54.4

Q ss_pred             ceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCC---------
Q 031436           13 PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQS---------   83 (159)
Q Consensus        13 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~---------   83 (159)
                      .++||||+.|++|.+....           +....+..|++.++.++|   ..+++||||||.|||++.++         
T Consensus       186 ~~LVME~i~G~~L~~l~~~-----------~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~dgd~~d~~~~~  251 (397)
T 4gyi_A          186 HTIVMSLVDALPMRQVSSV-----------PDPASLYADLIALILRLA---KHGLIHGDFNEFNILIREEKDAEDPSSIT  251 (397)
T ss_dssp             TEEEEECCSCEEGGGCCCC-----------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEEEECSSCTTSEE
T ss_pred             ceEEEEecCCccHhhhccc-----------HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeCCCCcccccccc
Confidence            4799999998887554311           123457899999999999   89999999999999997654         


Q ss_pred             -ceEEEecCCCcc
Q 031436           84 -VAKLFDFSYSES   95 (159)
Q Consensus        84 -~~~l~d~~~~~~   95 (159)
                       .+.++||+.+..
T Consensus       252 ~~~~iID~~Q~V~  264 (397)
T 4gyi_A          252 LTPIIIXFPQMVS  264 (397)
T ss_dssp             EEEEECCCTTCEE
T ss_pred             cceEEEEeCCccc
Confidence             378999986544

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.60  E-value=7.8e-08  Score=66.59  Aligned_cols=83  Identities=14%  Similarity=0.060  Sum_probs=61.0

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhc-------------------
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVA-------------------   62 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-------------------   62 (159)
                      ++++++.+.+..+++||+++|.++.+.+..          ......++.+++..+..||+.                   
T Consensus        74 ~v~~~~~~~~~~~lv~e~i~G~~l~~~~~~----------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~  143 (263)
T 3tm0_A           74 KVLHFERHDGWSNLLMSEADGVLCSEEYED----------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELD  143 (263)
T ss_dssp             CEEEEEEETTEEEEEEECCSSEEHHHHCCT----------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHH
T ss_pred             eEEEEEecCCceEEEEEecCCeehhhccCC----------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHH
Confidence            467778888889999999999888765311          112235677888888888841                   


Q ss_pred             -------------------------------------CCCCeEEecCCCCCEEecCCCceEEEecCCCc
Q 031436           63 -------------------------------------FSRPIVFRNVKPSNILFQEQSVAKLFDFSYSE   94 (159)
Q Consensus        63 -------------------------------------~~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~   94 (159)
                                                           ....++|+|+++.||+++....+.++||+.+.
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          144 YLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             HHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             HHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                                                 01458999999999999775556799998653

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.48  E-value=3.4e-07  Score=62.94  Aligned_cols=81  Identities=14%  Similarity=0.096  Sum_probs=55.0

Q ss_pred             eEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcC------------------
Q 031436            2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF------------------   63 (159)
Q Consensus         2 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~------------------   63 (159)
                      +++++...++..+++|||++|.++.  ...        ..   ...++.+++..+..+|+..                  
T Consensus        79 ~~~~~~~~~~~~~~v~e~i~G~~l~--~~~--------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~  145 (264)
T 1nd4_A           79 AVLDVVTEAGRDWLLLGEVPGQDLL--SSH--------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERAR  145 (264)
T ss_dssp             CEEEEEECSSCEEEEEECCSSEETT--TSC--------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHH
T ss_pred             eEEEeccCCCCCEEEEEecCCcccC--cCc--------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHH
Confidence            3677777777889999999987773  211        01   1134555666666666310                  


Q ss_pred             -------------------------------------CCCeEEecCCCCCEEecCCCceEEEecCCCcc
Q 031436           64 -------------------------------------SRPIVFRNVKPSNILFQEQSVAKLFDFSYSES   95 (159)
Q Consensus        64 -------------------------------------~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~~   95 (159)
                                                           ..+++|+|++|.||+++.+..+.++||+.+..
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          146 TRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             HHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             HHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence                                                 12399999999999998765567999987543

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.34  E-value=1.3e-06  Score=63.29  Aligned_cols=86  Identities=21%  Similarity=0.308  Sum_probs=62.2

Q ss_pred             eEEEEEecC---CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcC---------------
Q 031436            2 RLIGCCLET---ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF---------------   63 (159)
Q Consensus         2 ~l~~~~~~~---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~---------------   63 (159)
                      ++++.+.+.   +..+++||+++|.++.+...       ..++......+..+++..+..||+..               
T Consensus       102 ~~~~~~~~~~~~g~~~~vme~v~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~  174 (359)
T 3dxp_A          102 KMYALCEDESVIGRAFYIMEFVSGRVLWDQSL-------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNY  174 (359)
T ss_dssp             CEEEEECCTTTTSSCEEEEECCCCBCCCCTTC-------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCH
T ss_pred             cEEEECCCCCccCCeEEEEEecCCeecCCCcc-------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCc
Confidence            456777665   45899999999866643111       23556666677888888888888420               


Q ss_pred             ----------------------------------------CCCeEEecCCCCCEEecCCC--ceEEEecCCCc
Q 031436           64 ----------------------------------------SRPIVFRNVKPSNILFQEQS--VAKLFDFSYSE   94 (159)
Q Consensus        64 ----------------------------------------~~~~~h~~l~~~nil~~~~~--~~~l~d~~~~~   94 (159)
                                                              ...++|+|+++.||+++.+.  .+.++||+.+.
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~  247 (359)
T 3dxp_A          175 FQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELST  247 (359)
T ss_dssp             HHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCE
T ss_pred             hHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccc
Confidence                                                    24689999999999998764  35899998764

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=97.67  E-value=0.00016  Score=50.02  Aligned_cols=29  Identities=14%  Similarity=0.252  Sum_probs=24.1

Q ss_pred             CeEEecCCCCCEEecCCCceEEEecCCCc
Q 031436           66 PIVFRNVKPSNILFQEQSVAKLFDFSYSE   94 (159)
Q Consensus        66 ~~~h~~l~~~nil~~~~~~~~l~d~~~~~   94 (159)
                      .++|+|+.+.|++++....+-++||+.+.
T Consensus       194 ~l~HGDl~~~Nil~~~~~~~~viDwe~a~  222 (272)
T 4gkh_A          194 VVTHGDFSLDNLIFDEGKLIGCIDVGRVG  222 (272)
T ss_dssp             EEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             EEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence            47899999999999877666789998654

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.46  E-value=0.00019  Score=50.66  Aligned_cols=31  Identities=16%  Similarity=0.426  Sum_probs=25.2

Q ss_pred             CCeEEecCCCCCEEecC--CCceEEEecCCCcc
Q 031436           65 RPIVFRNVKPSNILFQE--QSVAKLFDFSYSES   95 (159)
Q Consensus        65 ~~~~h~~l~~~nil~~~--~~~~~l~d~~~~~~   95 (159)
                      ..++|+|+.+.|++++.  ...+.++||+.+..
T Consensus       191 ~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~  223 (304)
T 3sg8_A          191 PCLIHNDFSSDHILFDTEKNTICGIIDFGDAAI  223 (304)
T ss_dssp             CEEECSCCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred             ceeEeCCCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence            45799999999999987  45578999987543

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=97.16  E-value=0.0017  Score=45.95  Aligned_cols=31  Identities=16%  Similarity=0.374  Sum_probs=24.7

Q ss_pred             CCCeEEecCCCCCEEecC---CCc-eEEEecCCCc
Q 031436           64 SRPIVFRNVKPSNILFQE---QSV-AKLFDFSYSE   94 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~---~~~-~~l~d~~~~~   94 (159)
                      ...++|+|+.+.|++++.   +.. ..++||+.+.
T Consensus       189 ~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~  223 (306)
T 3tdw_A          189 TPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA  223 (306)
T ss_dssp             CCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCE
T ss_pred             CCeeEeCCCCcccEEEecCCCCCceEEEEehhhcC
Confidence            456899999999999987   344 4799998654

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=96.65  E-value=0.0057  Score=43.88  Aligned_cols=31  Identities=10%  Similarity=0.379  Sum_probs=24.9

Q ss_pred             CCCeEEecCCCCCEEecCCCceEEEecCCCc
Q 031436           64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSE   94 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~   94 (159)
                      ...++|+|+.+.||+++....+.++||..+.
T Consensus       221 ~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~  251 (357)
T 3ats_A          221 EPVLLWGDARVGNVLYRDFQPVAVLDWEMVA  251 (357)
T ss_dssp             CCEEECSSCSGGGEEEETTEEEEECCGGGCE
T ss_pred             CceEEeCCCCCCeEEEeCCcEEEEEcccccc
Confidence            3568999999999999854446889998654

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=94.62  E-value=0.048  Score=38.52  Aligned_cols=31  Identities=16%  Similarity=0.209  Sum_probs=26.9

Q ss_pred             CCCeEEecCCCCCEEecCCCceEEEecCCCc
Q 031436           64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSE   94 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~   94 (159)
                      ...++|+|+.+.|++++.+..+.++||+.+.
T Consensus       221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             SCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             cCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            5789999999999999776778999998654

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=93.33  E-value=0.4  Score=33.43  Aligned_cols=30  Identities=17%  Similarity=0.158  Sum_probs=23.9

Q ss_pred             CCCeEEecCCCCCEEecCCCceEEEecCCCc
Q 031436           64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSE   94 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~   94 (159)
                      ...++|+|+.+.|++ ..+..+.++||..+.
T Consensus       172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~  201 (301)
T 3dxq_A          172 PLAACHCDPLCENFL-DTGERMWIVDWEYSG  201 (301)
T ss_dssp             CCEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred             CceeeccCCCcCCEE-ECCCCEEEEeccccc
Confidence            456899999999999 445567999997654

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=93.24  E-value=0.12  Score=38.02  Aligned_cols=31  Identities=10%  Similarity=0.345  Sum_probs=26.6

Q ss_pred             CCCeEEecCCCCCEEecCCCceEEEecCCCcc
Q 031436           64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSES   95 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~~   95 (159)
                      ...++|+|+.+.||+++.+. +.++||+.+..
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~  261 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY  261 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence            67899999999999998766 89999986553

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=90.53  E-value=0.085  Score=37.09  Aligned_cols=31  Identities=16%  Similarity=0.421  Sum_probs=25.1

Q ss_pred             CCCeEEecCCCCCEEecCCCceEEEecCCCc
Q 031436           64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSE   94 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~   94 (159)
                      ..+++|+|+.+.|++++.+..+.++||+.+.
T Consensus       186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          186 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             CcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence            3568999999999999876555799997653

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=89.26  E-value=0.16  Score=35.89  Aligned_cols=32  Identities=19%  Similarity=0.349  Sum_probs=26.2

Q ss_pred             CCCeEEecCCCCCEEecCC----CceEEEecCCCcc
Q 031436           64 SRPIVFRNVKPSNILFQEQ----SVAKLFDFSYSES   95 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~----~~~~l~d~~~~~~   95 (159)
                      ...++|+|+.+.|++++.+    ..+.++||+.+..
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence            4679999999999999764    5689999986543

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=87.25  E-value=0.76  Score=32.25  Aligned_cols=29  Identities=14%  Similarity=0.236  Sum_probs=24.2

Q ss_pred             CCCeEEecCCCCCEEecCCCceEEEecCCCc
Q 031436           64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSE   94 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~   94 (159)
                      ...++|+|+.+.||+++ + .+.++||+.+.
T Consensus       194 ~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~  222 (328)
T 1zyl_A          194 TVLRLHGDCHAGNILWR-D-GPMFVDLDDAR  222 (328)
T ss_dssp             CCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred             CeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence            45689999999999998 4 78999997654

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=85.43  E-value=0.31  Score=32.91  Aligned_cols=95  Identities=11%  Similarity=0.013  Sum_probs=55.5

Q ss_pred             CChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecCCCcccCCCcce
Q 031436           23 GTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR  102 (159)
Q Consensus        23 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~  102 (159)
                      .||.+.+...+    .++.++++..++.|.+..+.-.-.  ++.-..+-..|..|++..++.+...+-. +.      . 
T Consensus        33 vSL~eIL~~~~----~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~~~-s~------~-   98 (229)
T 2yle_A           33 LSLEEILRLYN----QPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAPAA-DD------A-   98 (229)
T ss_dssp             EEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECCC------------
T ss_pred             ccHHHHHHHcC----CCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccccc-cc------c-
Confidence            47888877654    689999999999999988776621  1111234445677777777766544211 00      0 


Q ss_pred             eeeeecccccccCccccccCCCCCCcceEecccccc
Q 031436          103 IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRD  138 (159)
Q Consensus       103 ~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~  138 (159)
                            ....+.+||... ...+.+.=|||+|+++|
T Consensus        99 ------~~~~~~~pe~~~-~~~te~~~IysLG~tLY  127 (229)
T 2yle_A           99 ------GEPPPVAGKLGY-SQCMETEVIESLGIIIY  127 (229)
T ss_dssp             --------------CCSS-SSSCHHHHHHHHHHHHH
T ss_pred             ------cccCCCChhhcc-ccchHHHHHHHHHHHHH
Confidence                  011244676652 23456677899999983

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=84.35  E-value=0.5  Score=33.96  Aligned_cols=30  Identities=23%  Similarity=0.468  Sum_probs=23.7

Q ss_pred             CCCeEEecCCCCCEEecCCCceEEEecCCCc
Q 031436           64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSE   94 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~   94 (159)
                      ...++|+|+.+.|++++.+. +.++||..+.
T Consensus       211 ~~~l~HgDl~~~Nil~~~~~-~~lID~e~a~  240 (369)
T 3c5i_A          211 TIVFCHNDLQENNIINTNKC-LRLIDFEYSG  240 (369)
T ss_dssp             CEEEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred             CeEEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence            35689999999999997654 7899997543

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=83.64  E-value=1.4  Score=32.92  Aligned_cols=16  Identities=19%  Similarity=0.175  Sum_probs=14.6

Q ss_pred             CCeEEecCCCCCEEec
Q 031436           65 RPIVFRNVKPSNILFQ   80 (159)
Q Consensus        65 ~~~~h~~l~~~nil~~   80 (159)
                      ..++|+|+.+.||+++
T Consensus       290 ~v~cHnDl~~gNIL~~  305 (458)
T 2qg7_A          290 IVLCHCDLLSSNIINT  305 (458)
T ss_dssp             EEEECSCCCGGGEEEC
T ss_pred             eeEEecCCCCCcEEee
Confidence            4689999999999998

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=82.36  E-value=0.54  Score=33.53  Aligned_cols=31  Identities=10%  Similarity=0.247  Sum_probs=25.8

Q ss_pred             CCCeEEecCCCCCEEecCCCceEEEecCCCc
Q 031436           64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSE   94 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~   94 (159)
                      ...++|+|+.+.|++++.+..+.++||..+.
T Consensus       205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~  235 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPM  235 (339)
T ss_dssp             GCEEECSCCCGGGEEECGGGCEEECCCSSCE
T ss_pred             CceeEeCCCCcCCEEEeCCCeEEEEECCCCe
Confidence            3568999999999999876678999997544

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=82.12  E-value=0.69  Score=33.55  Aligned_cols=30  Identities=13%  Similarity=0.326  Sum_probs=24.8

Q ss_pred             CCCeEEecCCCCCEEecCCCceEEEecCCCc
Q 031436           64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSE   94 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~   94 (159)
                      ...++|+|+.+.||+++.+ .+.++||..+.
T Consensus       226 ~~~L~HGDl~~~Nil~~~~-~~~lID~e~a~  255 (397)
T 2olc_A          226 AETLIHGDLHTGSIFASEH-ETKVIDPEFAF  255 (397)
T ss_dssp             CCEEECSCCSGGGEEECSS-CEEECCCTTCE
T ss_pred             CCceeeCCCCcCcEEEeCC-CeEEEeCcccc
Confidence            5679999999999999765 38899997554

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=81.58  E-value=0.61  Score=34.50  Aligned_cols=18  Identities=17%  Similarity=0.359  Sum_probs=15.2

Q ss_pred             CCeEEecCCCCCEEecCC
Q 031436           65 RPIVFRNVKPSNILFQEQ   82 (159)
Q Consensus        65 ~~~~h~~l~~~nil~~~~   82 (159)
                      ..++|+|+.+.||+++.+
T Consensus       249 ~v~~H~Dl~~gNiL~~~~  266 (429)
T 1nw1_A          249 VTFCHNDLQEGNILLPKA  266 (429)
T ss_dssp             EEEECSCCCGGGEEEEC-
T ss_pred             eEEEeCCCCCCeEEeeCC
Confidence            458999999999999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	159
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-28
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	4e-28
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-27
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-27
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-27
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-26
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	8e-26
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-25
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	3e-25
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	5e-25
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-24
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-24
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-24
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	4e-24
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	9e-24
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-23
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-23
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-23
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-23
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	7e-23
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-22
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	4e-22
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-21
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-21
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	5e-21
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	8e-21
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-20
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-20
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-20
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-20
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-20
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-20
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	5e-20
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	5e-20
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	6e-20
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	7e-20
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-19
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-19
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-18
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-18
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	5e-18
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-17
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	8e-17
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-16
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	6e-16
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	8e-16
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	5e-15
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	6e-15
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	8e-15
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-14
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-14
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-14
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	7e-13
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	8e-13
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	9e-13
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-12
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-12
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-11
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	9e-11
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-08
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	3e-08
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-07
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	2e-04

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (259), Expect = 2e-28
 Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 7/132 (5%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           RL     + E   ++ EY+E G+L D +  P        T +  L +A +IA G+A++  
Sbjct: 72  RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIE- 126

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
              R  + R+++ +NIL  +    K+ DF  +  I + E   R        +  PE I  
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY 184

Query: 122 GDCNEKCDVYSF 133
           G    K DV+SF
Sbjct: 185 GTFTIKSDVWSF 196

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (259), Expect = 4e-28
 Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 10/133 (7%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +   G         +  E+++ G+L   +          +   +  K+++ +  G+ YL 
Sbjct: 67  VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-----RIPEQILGKVSIAVIKGLTYLR 121

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
                 I+ R+VKPSNIL   +   KL DF  S  + +         +GT  Y+ PE + 
Sbjct: 122 --EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQ 176

Query: 121 TGDCNEKCDVYSF 133
               + + D++S 
Sbjct: 177 GTHYSVQSDIWSM 189

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (251), Expect = 2e-27
 Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 12/136 (8%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
             +G         +V ++ E  +L   ++               + IA + A G+ YLH 
Sbjct: 68  LFMGYS-TAPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHA 122

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYLPPEYIA 120
              + I+ R++K +NI   E    K+ DF  +        +    ++ G+  ++ PE I 
Sbjct: 123 ---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179

Query: 121 TGDCN---EKCDVYSF 133
             D N    + DVY+F
Sbjct: 180 MQDKNPYSFQSDVYAF 195

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (250), Expect = 2e-27
 Identities = 26/133 (19%), Positives = 53/133 (39%), Gaps = 7/133 (5%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L G C +     ++ EY+  G L + +   R             ++  ++   + YL 
Sbjct: 62  VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL----EMCKDVCEAMEYLE 117

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + R++   N L  +Q V K+ DF  S  + + E            + PPE + 
Sbjct: 118 S---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLM 174

Query: 121 TGDCNEKCDVYSF 133
               + K D+++F
Sbjct: 175 YSKFSSKSDIWAF 187

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 5e-27
 Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 11/133 (8%)

Query: 2   RLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +L+G  +E +  + +V EY+  G+L D +    +           LK ++++   + YL 
Sbjct: 64  QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGG---DCLLKFSLDVCEAMEYLE 120

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
                  V R++   N+L  E +VAK+ DF  ++     +            +  PE + 
Sbjct: 121 ---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD----TGKLPVKWTAPEALR 173

Query: 121 TGDCNEKCDVYSF 133
               + K DV+SF
Sbjct: 174 EKKFSTKSDVWSF 186

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.5 bits (245), Expect = 2e-26
 Identities = 38/153 (24%), Positives = 62/153 (40%), Gaps = 12/153 (7%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           RL G   +     L+ EY   GT+   +                     E+A  ++Y H 
Sbjct: 70  RLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----KFDEQRTATYITELANALSYCH- 123

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
             S+ ++ R++KP N+L       K+ DF +S   P         + GT  YLPPE I  
Sbjct: 124 --SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT---TLCGTLDYLPPEMIEG 178

Query: 122 GDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWK 154
              +EK D++S  G      L G+  + +  ++
Sbjct: 179 RMHDEKVDLWSL-GVLCYEFLVGKPPFEANTYQ 210

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.1 bits (241), Expect = 8e-26
 Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 10/135 (7%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RLIG C + E  +LV E    G L   +   R    E +  S   ++  +++ G+ YL 
Sbjct: 72  VRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLE 126

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET--RIRGRVMGTFGYLPPEY 118
               +  V R++   N+L   +  AK+ DF  S+++   ++    R        +  PE 
Sbjct: 127 E---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC 183

Query: 119 IATGDCNEKCDVYSF 133
           I     + + DV+S+
Sbjct: 184 INFRKFSSRSDVWSY 198

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.2 bits (239), Expect = 1e-25
 Identities = 30/137 (21%), Positives = 57/137 (41%), Gaps = 6/137 (4%)

Query: 1   MRLIGCCLETEN--PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAY 58
           +R     ++  N    +V EY E G LA  I    +   + +     L++  ++   +  
Sbjct: 66  VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER-QYLDEEFVLRVMTQLTLALKE 124

Query: 59  LH--VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPP 116
            H        ++ R++KP+N+    +   KL DF  +  +    +      +GT  Y+ P
Sbjct: 125 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF-AKAFVGTPYYMSP 183

Query: 117 EYIATGDCNEKCDVYSF 133
           E +     NEK D++S 
Sbjct: 184 EQMNRMSYNEKSDIWSL 200

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.4 bits (239), Expect = 3e-25
 Identities = 36/151 (23%), Positives = 59/151 (39%), Gaps = 22/151 (14%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE------------------PVTCS 43
            L+G C  +    L+FEY  YG L + +   R+   E                   +T  
Sbjct: 105 NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 164

Query: 44  LRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET-R 102
             L  A ++A G+ +L     +  V R++   N+L     V K+ DF  +  I       
Sbjct: 165 DLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV 221

Query: 103 IRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
           +RG       ++ PE +  G    K DV+S+
Sbjct: 222 VRGNARLPVKWMAPESLFEGIYTIKSDVWSY 252

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.4 bits (234), Expect = 5e-25
 Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 7/133 (5%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L G CLE     LVFE++E+G L+D +   R            L + +++  G+AYL 
Sbjct: 63  VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET----LLGMCLDVCEGMAYLE 118

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
                 ++ R++   N L  E  V K+ DF  +  + + +            +  PE  +
Sbjct: 119 ---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 175

Query: 121 TGDCNEKCDVYSF 133
               + K DV+SF
Sbjct: 176 FSRYSSKSDVWSF 188

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.3 bits (234), Expect = 1e-24
 Identities = 31/138 (22%), Positives = 52/138 (37%), Gaps = 13/138 (9%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+       N  ++ E+   G +   +    +P  E         +  +    + YLH
Sbjct: 72  VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQ----IQVVCKQTLDALNYLH 127

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
                 I+ R++K  NILF      KL DF  S        R R   +GT  ++ PE + 
Sbjct: 128 ---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR-RDSFIGTPYWMAPEVVM 183

Query: 121 TGDC-----NEKCDVYSF 133
                    + K DV+S 
Sbjct: 184 CETSKDRPYDYKADVWSL 201

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.2 bits (231), Expect = 2e-24
 Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 10/135 (7%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++  G   E     L  EY   G L DRI          +      +   ++  G+ YLH
Sbjct: 66  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLH 120

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMGTFGYLPPEYI 119
                 I  R++KP N+L  E+   K+ DF  +         R+  ++ GT  Y+ PE +
Sbjct: 121 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 177

Query: 120 ATGDCN-EKCDVYSF 133
              + + E  DV+S 
Sbjct: 178 KRREFHAEPVDVWSC 192

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.1 bits (231), Expect = 3e-24
 Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 10/133 (7%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +  +   L  +   +V EY+  G+L D +        +         +  E    + +LH
Sbjct: 80  VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ------IAAVCRECLQALEFLH 133

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S  ++ R++K  NIL       KL DF +   I   +++ R  ++GT  ++ PE + 
Sbjct: 134 ---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSTMVGTPYWMAPEVVT 189

Query: 121 TGDCNEKCDVYSF 133
                 K D++S 
Sbjct: 190 RKAYGPKVDIWSL 202

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 93.1 bits (231), Expect = 4e-24
 Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 16/135 (11%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           +  GC L      LV EY           H +     P+       +      G+AYLH 
Sbjct: 79  QYRGCYLREHTAWLVMEYCLGSASDLLEVHKK-----PLQEVEIAAVTHGALQGLAYLH- 132

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
             S  ++ R+VK  NIL  E  + KL DF  +  +    +      +GT  ++ PE I  
Sbjct: 133 --SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS-----FVGTPYWMAPEVILA 185

Query: 122 ---GDCNEKCDVYSF 133
              G  + K DV+S 
Sbjct: 186 MDEGQYDGKVDVWSL 200

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 91.8 bits (227), Expect = 9e-24
 Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 23/153 (15%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIY-------------------HPRQPNFEPVT 41
           ++L+G C   +   L+FEY+ YG L + +                        P   P++
Sbjct: 79  VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 138

Query: 42  CSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE- 100
           C+ +L IA ++A G+AYL     R  V R++   N L  E  V K+ DF  S +I   + 
Sbjct: 139 CAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY 195

Query: 101 TRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
            +  G       ++PPE I       + DV+++
Sbjct: 196 YKADGNDAIPIRWMPPESIFYNRYTTESDVWAY 228

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.3 bits (226), Expect = 1e-23
 Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 11/134 (8%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           R+IG C E E+ +LV E  E G L   +   R      V     +++  +++ G+ YL  
Sbjct: 72  RMIGIC-EAESWMLVMEMAELGPLNKYLQQNR-----HVKDKNIIELVHQVSMGMKYLEE 125

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET--RIRGRVMGTFGYLPPEYI 119
                 V R++   N+L   Q  AK+ DF  S+++   E   + +        +  PE I
Sbjct: 126 ---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 182

Query: 120 ATGDCNEKCDVYSF 133
                + K DV+SF
Sbjct: 183 NYYKFSSKSDVWSF 196

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.9 bits (225), Expect = 2e-23
 Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 7/132 (5%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           +L       E   +V EY+  G+L D +                + +A +IA G+AY+  
Sbjct: 76  QLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRL---PQLVDMAAQIASGMAYVER 131

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
                 V R+++ +NIL  E  V K+ DF  +  I + E   R        +  PE    
Sbjct: 132 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 188

Query: 122 GDCNEKCDVYSF 133
           G    K DV+SF
Sbjct: 189 GRFTIKSDVWSF 200

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 90.9 bits (225), Expect = 2e-23
 Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 6/133 (4%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+G C       ++ E++ YG L D +    +     V     L +A +I+  + YL 
Sbjct: 76  VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQISSAMEYLE 132

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
               +  + R++   N L  E  + K+ DF  S  +                +  PE +A
Sbjct: 133 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 189

Query: 121 TGDCNEKCDVYSF 133
               + K DV++F
Sbjct: 190 YNKFSIKSDVWAF 202

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.0 bits (225), Expect = 3e-23
 Identities = 30/146 (20%), Positives = 56/146 (38%), Gaps = 17/146 (11%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE-------------PVTCSLRLKI 48
            L+G C      +++ EY  YG L + +   R                   +     L  
Sbjct: 91  NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150

Query: 49  AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR-IRGRV 107
           + ++A G+A+L    S+  + R++   NIL     + K+ DF  +  I       ++G  
Sbjct: 151 SYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207

Query: 108 MGTFGYLPPEYIATGDCNEKCDVYSF 133
                ++ PE I       + DV+S+
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSY 233

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.9 bits (222), Expect = 7e-23
 Identities = 32/144 (22%), Positives = 53/144 (36%), Gaps = 16/144 (11%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRI-----------YHPRQPNFEPVTCSLRLKIA 49
           + L+G C       L  EY  +G L D +           +         ++    L  A
Sbjct: 74  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 133

Query: 50  MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMG 109
            ++A G+ YL     +  + R++   NIL  E  VAK+ DF  S        +  GR   
Sbjct: 134 ADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGR--L 188

Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
              ++  E +         DV+S+
Sbjct: 189 PVRWMAIESLNYSVYTTNSDVWSY 212

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.5 bits (219), Expect = 1e-22
 Identities = 29/134 (21%), Positives = 52/134 (38%), Gaps = 9/134 (6%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L     + E       Y + G L   I             +       EI   + YLH
Sbjct: 71  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-----SFDETCTRFYTAEIVSALEYLH 125

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMGTFGYLPPEYI 119
               + I+ R++KP NIL  E    ++ DF  ++ + PE +       +GT  Y+ PE +
Sbjct: 126 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 182

Query: 120 ATGDCNEKCDVYSF 133
                 +  D+++ 
Sbjct: 183 TEKSACKSSDLWAL 196

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.1 bits (215), Expect = 4e-22
 Identities = 29/135 (21%), Positives = 57/135 (42%), Gaps = 10/135 (7%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G    T    +V E    G+L DR+   +             + A+++A G+ YL 
Sbjct: 74  IRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGT----LSRYAVQVAEGMGYLE 128

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET--RIRGRVMGTFGYLPPEY 118
              S+  + R++   N+L   + + K+ DF    ++P+ +    ++      F +  PE 
Sbjct: 129 ---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 185

Query: 119 IATGDCNEKCDVYSF 133
           + T   +   D + F
Sbjct: 186 LKTRTFSHASDTWMF 200

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.8 bits (212), Expect = 1e-21
 Identities = 32/137 (23%), Positives = 53/137 (38%), Gaps = 15/137 (10%)

Query: 2   RLIGCCLET----ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIA 57
           R       T    +  VLV E +  GTL   +       F+ +   +      +I  G+ 
Sbjct: 72  RFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK-----RFKVMKIKVLRSWCRQILKGLQ 126

Query: 58  YLHVAFSRPIVFRNVKPSNILF-QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPP 116
           +LH   + PI+ R++K  NI         K+ D   +        +    V+GT  ++ P
Sbjct: 127 FLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK---AVIGTPEFMAP 182

Query: 117 EYIATGDCNEKCDVYSF 133
           E       +E  DVY+F
Sbjct: 183 EMY-EEKYDESVDVYAF 198

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 85.9 bits (212), Expect = 3e-21
 Identities = 27/153 (17%), Positives = 61/153 (39%), Gaps = 12/153 (7%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
            L     +    V+++E++  G L +++          ++    ++   ++  G+ ++H 
Sbjct: 87  NLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK----MSEDEAVEYMRQVCKGLCHMH- 141

Query: 62  AFSRPIVFRNVKPSNILF--QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
                 V  ++KP NI+F  +  +  KL DF  +  +   ++       GT  +  PE  
Sbjct: 142 --ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK--VTTGTAEFAAPEVA 197

Query: 120 ATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
                    D++S  G      L+G + +  E+
Sbjct: 198 EGKPVGYYTDMWSV-GVLSYILLSGLSPFGGEN 229

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 85.5 bits (211), Expect = 5e-21
 Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 12/155 (7%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
            L     +    VL+ E++  G L DRI        E       +    +   G+ ++H 
Sbjct: 90  NLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAE----VINYMRQACEGLKHMH- 144

Query: 62  AFSRPIVFRNVKPSNILF--QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
                IV  ++KP NI+   ++ S  K+ DF  +  +   E         T  +  PE +
Sbjct: 145 --EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV--TTATAEFAAPEIV 200

Query: 120 ATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWK 154
                    D+++  G      L+G + +  ED  
Sbjct: 201 DREPVGFYTDMWAI-GVLGYVLLSGLSPFAGEDDL 234

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.1 bits (207), Expect = 8e-21
 Identities = 30/137 (21%), Positives = 60/137 (43%), Gaps = 11/137 (8%)

Query: 1   MRLIGCCLETEN-PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
           + L+G CL +E  P++V  Y+++G L + I +         T    +   +++A G+ +L
Sbjct: 91  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKFL 146

Query: 60  HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE---TRIRGRVMGTFGYLPP 116
                +  V R++   N +  E+   K+ DF  +  + + E      +        ++  
Sbjct: 147 AS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 203

Query: 117 EYIATGDCNEKCDVYSF 133
           E + T     K DV+SF
Sbjct: 204 ESLQTQKFTTKSDVWSF 220

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 84.0 bits (207), Expect = 1e-20
 Identities = 27/137 (19%), Positives = 49/137 (35%), Gaps = 11/137 (8%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           + L G   ++   +++ E++E G+L   +                + +   IA G+ YL 
Sbjct: 90  IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQ----LVGMLRGIAAGMKYLA 145

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRI----RGRVMGTFGYLPP 116
                  V R++   NIL     V K+ DF  S  + +  +               +  P
Sbjct: 146 D---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 202

Query: 117 EYIATGDCNEKCDVYSF 133
           E I         DV+S+
Sbjct: 203 EAIQYRKFTSASDVWSY 219

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.4 bits (205), Expect = 1e-20
 Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 24/151 (15%)

Query: 1   MRLIGCCLETENPV----LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGI 56
           +  I    +         LV +Y E+G+L D +          VT    +K+A+  A G+
Sbjct: 60  LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGL 113

Query: 57  AYLHVAF-----SRPIVFRNVKPSNILFQEQSVAKLFDF---SYSESIPEGETRIRGRVM 108
           A+LH+          I  R++K  NIL ++     + D       +S  +         +
Sbjct: 114 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 173

Query: 109 GTFGYLPPEYIAT------GDCNEKCDVYSF 133
           GT  Y+ PE +         +  ++ D+Y+ 
Sbjct: 174 GTKRYMAPEVLDDSINMKHFESFKRADIYAM 204

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.3 bits (205), Expect = 2e-20
 Identities = 29/134 (21%), Positives = 53/134 (39%), Gaps = 9/134 (6%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
            RL+G C  T    L+ + + +G L D +   +            L   ++IA G+ YL 
Sbjct: 74  CRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE 128

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GRVMGTFGYLPPEYI 119
               R +V R++   N+L +     K+ DF  ++ +   E             ++  E I
Sbjct: 129 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185

Query: 120 ATGDCNEKCDVYSF 133
                  + DV+S+
Sbjct: 186 LHRIYTHQSDVWSY 199

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.0 bits (204), Expect = 2e-20
 Identities = 31/145 (21%), Positives = 59/145 (40%), Gaps = 15/145 (10%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE-----------PVTCSLRLKIA 49
           + L+G C +     ++ EY   G L + +   R P  E            ++    +  A
Sbjct: 82  INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCA 141

Query: 50  MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM- 108
            ++A G+ YL    S+  + R++   N+L  E +V K+ DF  +  I   +   +     
Sbjct: 142 YQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 198

Query: 109 GTFGYLPPEYIATGDCNEKCDVYSF 133
               ++ PE +       + DV+SF
Sbjct: 199 LPVKWMAPEALFDRIYTHQSDVWSF 223

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.1 bits (202), Expect = 3e-20
 Identities = 27/132 (20%), Positives = 48/132 (36%), Gaps = 8/132 (6%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           +LIG   E     ++ E    G L   +          +  +  +  A +++  +AYL  
Sbjct: 72  KLIGVITE-NPVWIIMELCTLGELRSFLQV----RKYSLDLASLILYAYQLSTALAYLE- 125

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
             S+  V R++   N+L       KL DF  S  + +       +      ++ PE I  
Sbjct: 126 --SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 183

Query: 122 GDCNEKCDVYSF 133
                  DV+ F
Sbjct: 184 RRFTSASDVWMF 195

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 81.7 bits (201), Expect = 4e-20
 Identities = 37/139 (26%), Positives = 55/139 (39%), Gaps = 16/139 (11%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L           LVF+ ++ G L D +          ++     KI   +   I  LH
Sbjct: 73  IQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV-----TLSEKETRKIMRALLEVICALH 127

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
                 IV R++KP NIL  +    KL DF +S  +  GE      V GT  YL PE I 
Sbjct: 128 ---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAPEIIE 182

Query: 121 TGDC------NEKCDVYSF 133
                      ++ D++S 
Sbjct: 183 CSMNDNHPGYGKEVDMWST 201

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.9 bits (201), Expect = 5e-20
 Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 16/145 (11%)

Query: 2   RLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFE-----------PVTCSLRLKIA 49
            L+G C +   P+ ++ E+ ++G L+  +   R                 +T    +  +
Sbjct: 81  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 140

Query: 50  MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GRVM 108
            ++A G+ +L    SR  + R++   NIL  E++V K+ DF  +  I +    +R G   
Sbjct: 141 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 197

Query: 109 GTFGYLPPEYIATGDCNEKCDVYSF 133
               ++ PE I       + DV+SF
Sbjct: 198 LPLKWMAPETIFDRVYTIQSDVWSF 222

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.5 bits (203), Expect = 5e-20
 Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 15/139 (10%)

Query: 2   RLIGCC----LETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIA 57
           R++          +  ++V E ++ G L  RI   +    +  T     +I   I   I 
Sbjct: 69  RIVDVYENLYAGRKCLLIVMECLDGGELFSRI---QDRGDQAFTEREASEIMKSIGEAIQ 125

Query: 58  YLHVAFSRPIVFRNVKPSNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
           YLH   S  I  R+VKP N+L+   +  ++ KL DF +++      +        T  Y+
Sbjct: 126 YLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT--PCYTPYYV 180

Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE +     ++ CD++S 
Sbjct: 181 APEVLGPEKYDKSCDMWSL 199

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 82.5 bits (203), Expect = 6e-20
 Identities = 27/134 (20%), Positives = 53/134 (39%), Gaps = 12/134 (8%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           + +       +    + + +  G L   +        E          A EI  G+ ++H
Sbjct: 70  VCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEA----DMRFYAAEIILGLEHMH 124

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              +R +V+R++KP+NIL  E    ++ D   +    + +       +GT GY+ PE + 
Sbjct: 125 ---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASVGTHGYMAPEVLQ 178

Query: 121 TG-DCNEKCDVYSF 133
            G   +   D +S 
Sbjct: 179 KGVAYDSSADWFSL 192

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.0 bits (202), Expect = 7e-20
 Identities = 24/135 (17%), Positives = 51/135 (37%), Gaps = 11/135 (8%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           + L       E  V++FE++    + +RI          +     +    ++   + +LH
Sbjct: 64  LHLHESFESMEELVMIFEFISGLDIFERINTSAFE----LNEREIVSYVHQVCEALQFLH 119

Query: 61  VAFSRPIVFRNVKPSNILFQ--EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEY 118
              S  I   +++P NI++Q    S  K+ +F  +  +  G+      +     Y  PE 
Sbjct: 120 ---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF--RLLFTAPEYYAPEV 174

Query: 119 IATGDCNEKCDVYSF 133
                 +   D++S 
Sbjct: 175 HQHDVVSTATDMWSL 189

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.3 bits (200), Expect = 1e-19
 Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 9/132 (6%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
            +       EN   V EY+  G L   I             S     A EI  G+ +LH 
Sbjct: 67  HMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH-----KFDLSRATFYAAEIILGLQFLH- 120

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
             S+ IV+R++K  NIL  +    K+ DF   +    G+ +      GT  Y+ PE +  
Sbjct: 121 --SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNTFCGTPDYIAPEILLG 177

Query: 122 GDCNEKCDVYSF 133
              N   D +SF
Sbjct: 178 QKYNHSVDWWSF 189

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.9 bits (196), Expect = 3e-19
 Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 9/135 (6%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL G   + +  +++ EY+E G L   +                + +   IA G+ YL 
Sbjct: 72  IRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQ----LVGMLRGIAAGMKYLA 127

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE--TRIRGRVMGTFGYLPPEY 118
              +   V R++   NIL     V K+ DF  S  + +    T           +  PE 
Sbjct: 128 ---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 184

Query: 119 IATGDCNEKCDVYSF 133
           I+        DV+SF
Sbjct: 185 ISYRKFTSASDVWSF 199

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.4 bits (192), Expect = 1e-18
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ-----PNFEPVTCSLRLKIAMEIAYG 55
           +RL+G   + +  +++ E +  G L   +   R      P   P + S  +++A EIA G
Sbjct: 86  VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 145

Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
           +AYL+   +   V R++   N +  E    K+ DF  +  I E +  R  G+ +    ++
Sbjct: 146 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 202

Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE +  G      DV+SF
Sbjct: 203 SPESLKDGVFTTYSDVWSF 221

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 77.1 bits (189), Expect = 3e-18
 Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 14/139 (10%)

Query: 1   MRLIGCCLETEN----PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGI 56
           + +             P +V EYV+  TL D ++        P+T    +++  +    +
Sbjct: 70  VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEVIADACQAL 124

Query: 57  AYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRI--RGRVMGTFGYL 114
            + H      I+ R+VKP+NI+    +  K+ DF  + +I +    +     V+GT  YL
Sbjct: 125 NFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 181

Query: 115 PPEYIATGDCNEKCDVYSF 133
            PE       + + DVYS 
Sbjct: 182 SPEQARGDSVDARSDVYSL 200

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 76.6 bits (188), Expect = 5e-18
 Identities = 34/135 (25%), Positives = 53/135 (39%), Gaps = 13/135 (9%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
            L        +  L+ + V  G L DRI           T     ++  ++   + YLH 
Sbjct: 71  ALDDIYESGGHLYLIMQLVSGGELFDRIVEKG-----FYTERDASRLIFQVLDAVKYLH- 124

Query: 62  AFSRPIVFRNVKPSNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEY 118
                IV R++KP N+L+    E S   + DF  S+    G         GT GY+ PE 
Sbjct: 125 --DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV--LSTACGTPGYVAPEV 180

Query: 119 IATGDCNEKCDVYSF 133
           +A    ++  D +S 
Sbjct: 181 LAQKPYSKAVDCWSI 195

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 74.7 bits (183), Expect = 2e-17
 Identities = 32/133 (24%), Positives = 64/133 (48%), Gaps = 12/133 (9%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +R+ G   + +   ++ +Y+E G L   +   ++         +    A E+   + YLH
Sbjct: 67  IRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRF-----PNPVAKFYAAEVCLALEYLH 121

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S+ I++R++KP NIL  +    K+ DF +++ +P+    + G       Y+ PE ++
Sbjct: 122 ---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTP----DYIAPEVVS 174

Query: 121 TGDCNEKCDVYSF 133
           T   N+  D +SF
Sbjct: 175 TKPYNKSIDWWSF 187

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.4 bits (179), Expect = 8e-17
 Identities = 31/134 (23%), Positives = 50/134 (37%), Gaps = 10/134 (7%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           + L+       N  LVF+++E       I             S      +    G+ YLH
Sbjct: 63  IGLLDAFGHKSNISLVFDFMETDLEVI-IKDNSLVLTP----SHIKAYMLMTLQGLEYLH 117

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
                 I+ R++KP+N+L  E  V KL DF  ++S          +V  T  Y  PE + 
Sbjct: 118 ---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQV-VTRWYRAPELLF 173

Query: 121 TGDC-NEKCDVYSF 133
                    D+++ 
Sbjct: 174 GARMYGVGVDMWAV 187

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.2 bits (176), Expect = 2e-16
 Identities = 27/134 (20%), Positives = 47/134 (35%), Gaps = 6/134 (4%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLA-DRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
           +RL   C  +         + +  +  D   +  +     V       +  ++  G+ +L
Sbjct: 73  VRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 132

Query: 60  HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
           H   S  +V R++KP NIL       KL DF  +             V+ T  Y  PE +
Sbjct: 133 H---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--TSVVVTLWYRAPEVL 187

Query: 120 ATGDCNEKCDVYSF 133
                    D++S 
Sbjct: 188 LQSSYATPVDLWSV 201

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.5 bits (172), Expect = 6e-16
 Identities = 28/135 (20%), Positives = 47/135 (34%), Gaps = 12/135 (8%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           +RL+      ++ VL+ E  E           R    E     L      ++   + + H
Sbjct: 72  IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEE----LARSFFWQVLEAVRHCH 127

Query: 61  VAFSRPIVFRNVKPSNILF-QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
              +  ++ R++K  NIL    +   KL DF     + +          GT  Y PPE+I
Sbjct: 128 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT---DFDGTRVYSPPEWI 181

Query: 120 ATGD-CNEKCDVYSF 133
                      V+S 
Sbjct: 182 RYHRYHGRSAAVWSL 196

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.6 bits (172), Expect = 8e-16
 Identities = 31/136 (22%), Positives = 53/136 (38%), Gaps = 14/136 (10%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
            L        + +L+ E V  G L D +        E        +   +I  G+ YLH 
Sbjct: 77  TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA-----TEFLKQILNGVYYLH- 130

Query: 62  AFSRPIVFRNVKPSNILFQEQSVA----KLFDFSYSESIPEGETRIRGRVMGTFGYLPPE 117
             S  I   ++KP NI+  +++V     K+ DF  +  I  G       + GT  ++ PE
Sbjct: 131 --SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPE 186

Query: 118 YIATGDCNEKCDVYSF 133
            +       + D++S 
Sbjct: 187 IVNYEPLGLEADMWSI 202

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 68.4 bits (166), Expect = 5e-15
 Identities = 23/132 (17%), Positives = 50/132 (37%), Gaps = 8/132 (6%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           +L       +  VLVFE+++                  +         +++  GIAY H 
Sbjct: 64  KLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEG-----GLESVTAKSFLLQLLNGIAYCH- 117

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
              R ++ R++KP N+L   +   K+ DF  + +      +    ++  +   P   + +
Sbjct: 118 --DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGS 175

Query: 122 GDCNEKCDVYSF 133
              +   D++S 
Sbjct: 176 KKYSTTIDIWSV 187

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 67.9 bits (165), Expect = 6e-15
 Identities = 28/141 (19%), Positives = 49/141 (34%), Gaps = 17/141 (12%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
            +  C  E +  V+V E +         +  R       +    L +A ++   I Y+H 
Sbjct: 67  TIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR-----KFSLKTVLLLADQMISRIEYIH- 120

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKL---FDFSYSESIPEGET------RIRGRVMGTFG 112
             S+  + R+VKP N L        L    DF  ++   +  T      R    + GT  
Sbjct: 121 --SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTAR 178

Query: 113 YLPPEYIATGDCNEKCDVYSF 133
           Y         + + + D+ S 
Sbjct: 179 YASINTHLGIEQSRRDDLESL 199

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 67.9 bits (165), Expect = 8e-15
 Identities = 20/144 (13%), Positives = 48/144 (33%), Gaps = 19/144 (13%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
             +     E  + VLV + +            R       +       A ++   +  +H
Sbjct: 64  PNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGR-----KFSVKTVAMAAKQMLARVQSIH 118

Query: 61  VAFSRPIVFRNVKPSNILFQEQ-----SVAKLFDFSYSESIPEGETRI------RGRVMG 109
               + +V+R++KP N L         ++  + DF   +   +  T+       +  + G
Sbjct: 119 ---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSG 175

Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
           T  Y+        + + + D+ + 
Sbjct: 176 TARYMSINTHLGREQSRRDDLEAL 199

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.2 bits (163), Expect = 1e-14
 Identities = 23/133 (17%), Positives = 47/133 (35%), Gaps = 7/133 (5%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+          LVFE++                   +   L      ++  G+A+ H
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLAFCH 119

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S  ++ R++KP N+L   +   KL DF  + +           V+  +   P   + 
Sbjct: 120 ---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176

Query: 121 TGDCNEKCDVYSF 133
               +   D++S 
Sbjct: 177 CKYYSTAVDIWSL 189

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.2 bits (163), Expect = 2e-14
 Identities = 27/159 (16%), Positives = 53/159 (33%), Gaps = 17/159 (10%)

Query: 2   RLIGCC----LETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIA 57
            +        +E    V +  ++    L   +      N              +I  G+ 
Sbjct: 70  GINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDH------ICYFLYQILRGLK 123

Query: 58  YLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRI--RGRVMGTFGYLP 115
           Y+H   S  ++ R++KPSN+L       K+ DF  +                + T  Y  
Sbjct: 124 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 180

Query: 116 PEYIATGDC-NEKCDVYSFDGSRDSGHLTGRAWYRSEDW 153
           PE +       +  D++S  G   +  L+ R  +  + +
Sbjct: 181 PEIMLNSKGYTKSIDIWSV-GCILAEMLSNRPIFPGKHY 218

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.1 bits (163), Expect = 2e-14
 Identities = 29/139 (20%), Positives = 50/139 (35%), Gaps = 13/139 (9%)

Query: 2   RLIGCCLETENP------VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYG 55
           RL      +          LV +YV         ++ R    + +          ++   
Sbjct: 77  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK--QTLPVIYVKLYMYQLFRS 134

Query: 56  IAYLHVAFSRPIVFRNVKPSNI-LFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
           +AY+H   S  I  R++KP N+ L  + +V KL DF  ++ +  GE      +   +   
Sbjct: 135 LAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSYICSRYYRA 190

Query: 115 PPEYIATGDCNEKCDVYSF 133
           P       D     DV+S 
Sbjct: 191 PELIFGATDYTSSIDVWSA 209

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 62.6 bits (151), Expect = 7e-13
 Identities = 29/136 (21%), Positives = 49/136 (36%), Gaps = 15/136 (11%)

Query: 1   MRLIGCCLETEN--PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAY 58
           + L     +  +  P LVFE+V                 + +T         EI   + Y
Sbjct: 93  ITLADIVKDPVSRTPALVFEHVNNTDFKQLY--------QTLTDYDIRFYMYEILKALDY 144

Query: 59  LHVAFSRPIVFRNVKPSNILF-QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPE 117
            H   S  I+ R+VKP N++   E    +L D+  +E    G+     RV   +   P  
Sbjct: 145 CH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-EYNVRVASRYFKGPEL 200

Query: 118 YIATGDCNEKCDVYSF 133
            +     +   D++S 
Sbjct: 201 LVDYQMYDYSLDMWSL 216

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.5 bits (151), Expect = 8e-13
 Identities = 30/133 (22%), Positives = 44/133 (33%), Gaps = 9/133 (6%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
             L       +    V EY   G L   +   R    E            EI   + YLH
Sbjct: 68  TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-----YGAEIVSALEYLH 122

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              SR +V+R++K  N++  +    K+ DF   +              GT  YL PE + 
Sbjct: 123 ---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT-MKTFCGTPEYLAPEVLE 178

Query: 121 TGDCNEKCDVYSF 133
             D     D +  
Sbjct: 179 DNDYGRAVDWWGL 191

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 62.1 bits (150), Expect = 9e-13
 Identities = 30/152 (19%), Positives = 59/152 (38%), Gaps = 13/152 (8%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L     +  N  +V EYV  G +   +           +       A +I     YLH
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-----RFSEPHARFYAAQIVLTFEYLH 158

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
              S  +++R++KP N+L  +Q   ++ DF +++ +      + G        L PE I 
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTP----EALAPEIIL 211

Query: 121 TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
           +   N+  D ++  G        G   + ++ 
Sbjct: 212 SKGYNKAVDWWAL-GVLIYEMAAGYPPFFADQ 242

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.8 bits (149), Expect = 1e-12
 Identities = 30/164 (18%), Positives = 54/164 (32%), Gaps = 21/164 (12%)

Query: 1   MRLIGCCLETENPV--------LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEI 52
           + LI  C    +P         LVF++ E+                  T S   ++   +
Sbjct: 72  VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV-----KFTLSEIKRVMQML 126

Query: 53  AYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET---RIRGRVMG 109
              +  L+      I+ R++K +N+L     V KL DF  + +    +          + 
Sbjct: 127 ---LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVV 183

Query: 110 TFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
           T  Y PPE +    D     D++   G   +   T     +   
Sbjct: 184 TLWYRPPELLLGERDYGPPIDLWGA-GCIMAEMWTRSPIMQGNT 226

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.9 bits (149), Expect = 1e-12
 Identities = 22/132 (16%), Positives = 44/132 (33%), Gaps = 8/132 (6%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
           RL       +   LVFE+ +              + E     +      ++  G+ + H 
Sbjct: 65  RLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPE-----IVKSFLFQLLKGLGFCHS 119

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
              R ++ R++KP N+L       KL +F  + +           V+  +   P      
Sbjct: 120 ---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA 176

Query: 122 GDCNEKCDVYSF 133
              +   D++S 
Sbjct: 177 KLYSTSIDMWSA 188

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (138), Expect = 4e-11
 Identities = 30/135 (22%), Positives = 50/135 (37%), Gaps = 10/135 (7%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           + L           L+ +Y+  G L   +    +     V   +      EI   + +LH
Sbjct: 92  VTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVG-----EIVLALEHLH 146

Query: 61  VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
                 I++R++K  NIL        L DF  S+     ET       GT  Y+ P+ + 
Sbjct: 147 ---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVR 203

Query: 121 TGD--CNEKCDVYSF 133
            GD   ++  D +S 
Sbjct: 204 GGDSGHDKAVDWWSL 218

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.8 bits (136), Expect = 9e-11
 Identities = 24/153 (15%), Positives = 55/153 (35%), Gaps = 8/153 (5%)

Query: 2   RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
            L+      E      ++             +    E +       +  ++  G+ Y+H 
Sbjct: 81  GLLDVFTPDETLDDFTDFYLVMPFMGTDLG-KLMKHEKLGEDRIQFLVYQMLKGLRYIH- 138

Query: 62  AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
             +  I+ R++KP N+   E    K+ DF  +      ++ + G V+  +   P   +  
Sbjct: 139 --AAGIIHRDLKPGNLAVNEDCELKILDFGLARQA---DSEMTGYVVTRWYRAPEVILNW 193

Query: 122 GDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWK 154
               +  D++S  G   +  +TG+  ++  D  
Sbjct: 194 MRYTQTVDIWSV-GCIMAEMITGKTLFKGSDHL 225

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.9 bits (118), Expect = 2e-08
 Identities = 30/159 (18%), Positives = 54/159 (33%), Gaps = 20/159 (12%)

Query: 2   RLIGCCL------ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYG 55
            L+          E ++  LV E ++                          +  ++  G
Sbjct: 80  SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE--------RMSYLLYQMLCG 131

Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLP 115
           I +LH   S  I+ R++KPSNI+ +     K+ DF  + +            + T  Y  
Sbjct: 132 IKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRYYRA 186

Query: 116 PEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWK 154
           PE I      E  D++S  G      +  +  +   D+ 
Sbjct: 187 PEVILGMGYKENVDIWSV-GCIMGEMVRHKILFPGRDYI 224

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.6 bits (117), Expect = 3e-08
 Identities = 21/157 (13%), Positives = 50/157 (31%), Gaps = 5/157 (3%)

Query: 1   MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
           ++L+          +    V      + +   ++     +      +I+ ++  G+ Y+H
Sbjct: 83  LKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH 142

Query: 61  VAFSRPIVFRNVKPSNILF-QEQSVAKLFDFSYSESIPEGETRIR-GRVMGTFGYLPPEY 118
                 I+  ++KP N+L     S   L     ++              + T  Y  PE 
Sbjct: 143 --RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEV 200

Query: 119 IATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWKP 155
           +         D++S         +TG   +  ++   
Sbjct: 201 LLGAPWGCGADIWST-ACLIFELITGDFLFEPDEGHS 236

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.6 bits (112), Expect = 1e-07
 Identities = 33/157 (21%), Positives = 61/157 (38%), Gaps = 18/157 (11%)

Query: 1   MRLIGCC-----LETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYG 55
           + L+        LE  N V +  ++    L + +   +  +           +  +I  G
Sbjct: 80  IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH------VQFLIYQILRG 133

Query: 56  IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLP 115
           + Y+H   S  I+ R++KPSN+   E    K+ DF  +      +  + G V   +   P
Sbjct: 134 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAP 187

Query: 116 PEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
              +     N+  D++S  G   +  LTGR  +   D
Sbjct: 188 EIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 223

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 37.5 bits (86), Expect = 2e-04
 Identities = 14/93 (15%), Positives = 30/93 (32%), Gaps = 16/93 (17%)

Query: 4   IGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
           +      E   ++ E ++   L                     ++   I   +A  +   
Sbjct: 76  VPKVYAWEGNAVLMELIDAKELYRVRVENPD------------EVLDMILEEVAKFY--- 120

Query: 64  SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI 96
            R IV  ++   N+L  E+ +  + DF  S  +
Sbjct: 121 HRGIVHGDLSQYNVLVSEEGI-WIIDFPQSVEV 152

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	159
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.98
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.98
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.98
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.98
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.97
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.97
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.97
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.97
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.97
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.97
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.97
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.97
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.97
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.97
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.97
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.96
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.96
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.96
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.96
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.95
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.9
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.42
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	97.46
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	96.49
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	93.75
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	84.9

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-39  Score=226.98  Aligned_cols=141  Identities=26%  Similarity=0.470  Sum_probs=127.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++|||||++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        69 v~~~~~~~~~~~~~ivmEy~~~g~L~~~l~~~-----~~l~e~~~~~i~~qi~~al~~lH---~~~ivHrDiKp~Nill~  140 (263)
T d2j4za1          69 LRLYGYFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLG  140 (263)
T ss_dssp             CCEEEEEECSSEEEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEC
T ss_pred             CeEEEEEEECCEEEEEEeecCCCcHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeeeeccccceec
Confidence            68999999999999999999999999998754     46889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.+|++|||++........   ....|++.|+|||.+.+..++.++|+||+||++ |+|++|+.||.+.+.
T Consensus       141 ~~~~~kl~DFG~a~~~~~~~~---~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvil-yell~G~~Pf~~~~~  209 (263)
T d2j4za1         141 SAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLC-YEFLVGKPPFEANTY  209 (263)
T ss_dssp             TTSCEEECCCCSCSCCCCCCC---EETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHH-HHHHHSSCTTCCSSH
T ss_pred             CCCCEeecccceeeecCCCcc---cccCCCCcccCHHHHcCCCCCchhhhhhHhHHH-HHHhcCCCCCCCCCH
Confidence            999999999999876644322   345689999999999999999999999999999 999999999987654

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-39  Score=226.31  Aligned_cols=141  Identities=23%  Similarity=0.384  Sum_probs=125.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++|||||++|+|.+.+..      ..+++.++..++.|++.|+.|||   +++++||||||+||+++
T Consensus        80 v~~~~~~~~~~~~~ivmEy~~gg~L~~~~~~------~~l~~~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp~NILl~  150 (293)
T d1yhwa1          80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLG  150 (293)
T ss_dssp             CCEEEEEEETTEEEEEEECCTTCBHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEC
T ss_pred             eeEeEEEEECCEEEEEEEecCCCcHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCcHHHeEEC
Confidence            6899999999999999999999999987754      35889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+|++|||++........ ......|++.|+|||.+.+..++.++|+||+||++ |+|++|+.||.+.+
T Consensus       151 ~~~~vkl~DFG~a~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil-yemltG~~Pf~~~~  220 (293)
T d1yhwa1         151 MDGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMA-IEMIEGEPPYLNEN  220 (293)
T ss_dssp             TTCCEEECCCTTCEECCSTTC-CBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHH-HHHHHSSCTTTTSC
T ss_pred             CCCcEeeccchhheeeccccc-cccccccCCCccChhhhcCCCCCchhceehHhHHH-HHHhhCCCCCCCCC
Confidence            999999999999987644332 22345689999999999999999999999999999 99999999998765

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-39  Score=226.41  Aligned_cols=144  Identities=25%  Similarity=0.376  Sum_probs=125.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++|||||++|+|.+.+...     ..+++.++..++.|++.|+.|||   +++++||||||+||+++
T Consensus        66 v~~~~~~~~~~~~~ivmEy~~gg~L~~~l~~~-----~~l~e~~~~~i~~qi~~al~ylH---~~~IiHrDiKp~NILl~  137 (271)
T d1nvra_          66 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLD  137 (271)
T ss_dssp             CCEEEEEEETTEEEEEEECCTTEEGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEC
T ss_pred             eeEeeeeccCceeEEEEeccCCCcHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH---HcCCccCcccHHHEEEC
Confidence            68999999999999999999999999988643     56899999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCC-CCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDC-NEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~-~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.+||+|||++........ .......||+.|+|||.+.+..+ +.++|+||+||++ |+|++|+.||...+.
T Consensus       138 ~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvil-yeml~G~~pf~~~~~  211 (271)
T d1nvra_         138 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL-TAMLAGELPWDQPSD  211 (271)
T ss_dssp             TTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHH-HHHHHSSCSCSSSST
T ss_pred             CCCCEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHH-HHHHhCCCCCCCCCh
Confidence            999999999999886543322 22334578999999999988876 5789999999999 999999999977543

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-39  Score=225.96  Aligned_cols=143  Identities=20%  Similarity=0.331  Sum_probs=124.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..|+|||||++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        71 v~l~~~~~~~~~~~ivmEy~~gg~L~~~~~~~-----~~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp~NIll~  142 (288)
T d1uu3a_          71 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-----GSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLN  142 (288)
T ss_dssp             CCEEEEEECSSEEEEEECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC
T ss_pred             eEEEEEEEECCEEEEEEEccCCCCHHHhhhcc-----CCCCHHHHHHHHHHHHHHHHhhc---cccEEcCcCCccccccC
Confidence            67899999999999999999999999987654     46889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+|++|||+++....... .......||+.|+|||.+.+..++.++||||+||++ |+|++|+.||.+.+
T Consensus       143 ~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvil-yell~g~~Pf~~~~  214 (288)
T d1uu3a_         143 EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCII-YQLVAGLPPFRAGN  214 (288)
T ss_dssp             TTSCEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             CCceEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHH-HHHhhCCCCCCCcC
Confidence            999999999999987653322 222345689999999999999999999999999999 99999999998765

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-38  Score=226.54  Aligned_cols=144  Identities=22%  Similarity=0.304  Sum_probs=128.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++.+++|||||++|+|.+.+...     ..+++..+..++.|++.|+.|+|   +++++||||||+||+++
T Consensus        68 v~l~~~~~~~~~~~iv~ey~~gg~L~~~~~~~-----~~~~e~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NILl~  139 (337)
T d1o6la_          68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRE-----RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLD  139 (337)
T ss_dssp             CCEEEEEECSSEEEEEEECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEEC
T ss_pred             EEEEeeeccccccccceeccCCCchhhhhhcc-----cCCcHHHHHHHHHHHhhhhhhhh---hcCccccccCHHHeEec
Confidence            67899999999999999999999999988764     45888999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCCc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWK  154 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~  154 (159)
                      .++.+|++|||+++........ .....||+.|+|||++.+..++.++|+||+||++ |+|++|+.||.+.+.+
T Consensus       140 ~~g~vkl~DFG~a~~~~~~~~~-~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvil-yeml~G~~pf~~~~~~  211 (337)
T d1o6la_         140 KDGHIKITDFGLCKEGISDGAT-MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM-YEMMCGRLPFYNQDHE  211 (337)
T ss_dssp             TTSCEEECCCTTCBCSCCTTCC-BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHH-HHHHHSSCSSCCSSHH
T ss_pred             CCCCEEEeecccccccccCCcc-cccceeCHHHhhhhhccCCCCChhhcccchhhHH-HHHHHCCCCCCCcCHH
Confidence            9999999999999866443322 2345789999999999999999999999999999 9999999999887643

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-39  Score=230.54  Aligned_cols=141  Identities=23%  Similarity=0.370  Sum_probs=124.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCC-CCeEEecCCCCCEEe
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS-RPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~-~~~~h~~l~~~nil~   79 (159)
                      |+++++|.+++..++||||+++|+|.+.+.+.     ..+++..+..++.|++.|+.|||   + ++++||||||+|||+
T Consensus        67 v~l~~~~~~~~~~~iVmEy~~gg~L~~~l~~~-----~~l~~~~~~~~~~qil~aL~yLH---~~~~IiHRDiKP~NILl  138 (322)
T d1s9ja_          67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILV  138 (322)
T ss_dssp             CCEEEEEECSSEEEEEEECCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEE
T ss_pred             CcEEEEEEECCEEEEEEEcCCCCcHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHH---HhCCEEccccCHHHeeE
Confidence            68999999999999999999999999998754     45889999999999999999999   5 489999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           80 QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      +.++.+|++|||++......   ......||+.|+|||++.+..++.++||||+||++ |+|++|+.||.+.+.
T Consensus       139 ~~~~~vkl~DFGla~~~~~~---~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil-~ell~G~~Pf~~~~~  208 (322)
T d1s9ja_         139 NSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL-VEMAVGRYPIPPPDA  208 (322)
T ss_dssp             CTTCCEEECCCCCCHHHHHH---TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHH-HHHHHSSCCSSCCCT
T ss_pred             CCCCCEEEeeCCCccccCCC---ccccccCCccccCchHHcCCCCCcHHHHHHHHHHH-HHHHHCCCCCCCCCH
Confidence            99999999999998765321   12345789999999999999999999999999999 999999999987653

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-38  Score=225.23  Aligned_cols=150  Identities=25%  Similarity=0.393  Sum_probs=127.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCC------------------CCCccchhhHHHHHHHHHHHHHHhhhc
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQP------------------NFEPVTCSLRLKIAMEIAYGIAYLHVA   62 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~------------------~~~~~~~~~~~~~~~~i~~~l~~lh~~   62 (159)
                      |+++|+|.+.+.+++|||||++|+|.+++...+..                  ....+++..+..++.|++.|+.|||  
T Consensus       104 v~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH--  181 (325)
T d1rjba_         104 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE--  181 (325)
T ss_dssp             CCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH--
T ss_pred             eEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHH--
Confidence            68999999999999999999999999998764321                  1235788899999999999999999  


Q ss_pred             CCCCeEEecCCCCCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCcc
Q 031436           63 FSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGH  141 (159)
Q Consensus        63 ~~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~  141 (159)
                       +++++||||||+||+++.+..+|++|||+++....... .......+|+.|+|||.+.+..++.++|||||||++ |||
T Consensus       182 -~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil-~em  259 (325)
T d1rjba_         182 -FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILL-WEI  259 (325)
T ss_dssp             -HTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH-HHH
T ss_pred             -hCCeeeccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHH-HHH
Confidence             89999999999999999999999999999876544332 222344578899999999999999999999999999 999


Q ss_pred             ee-cccccccCCCc
Q 031436          142 LT-GRAWYRSEDWK  154 (159)
Q Consensus       142 ~~-g~~p~~~~~~~  154 (159)
                      ++ |+.||.+.+..
T Consensus       260 lt~g~~Pf~~~~~~  273 (325)
T d1rjba_         260 FSLGVNPYPGIPVD  273 (325)
T ss_dssp             TTTSCCSSTTCCCS
T ss_pred             HhCCCCCCCCCCHH
Confidence            97 89999886543

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-38  Score=219.70  Aligned_cols=144  Identities=25%  Similarity=0.409  Sum_probs=115.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++|+|.+++..++||||+++|+|.+++....    ..+++.....++.|++.|+.|+|   +++++||||||+||+++
T Consensus        63 v~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~----~~~~~~~~~~i~~qia~gl~~lH---~~~iiHrDlKp~Nill~  135 (263)
T d1sm2a_          63 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR----GLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVG  135 (263)
T ss_dssp             CCEEEEECSSSSCEEEEECCTTCBHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCTTCSGGGEEEC
T ss_pred             ccccceeccCCceEEEEEecCCCcHHHHhhccc----cCCCHHHHHHHHHHHHHHHHhhh---ccceeecccchhheeec
Confidence            689999999999999999999999999887543    45788889999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .+..+||+|||+++..............++..|+|||.+.+..++.++||||||+++ |||++ |.+||...+
T Consensus       136 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil-~el~t~~~~~~~~~~  207 (263)
T d1sm2a_         136 ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM-WEVFSEGKIPYENRS  207 (263)
T ss_dssp             GGGCEEECSCC------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHH-HHHHTTSCCTTCSCC
T ss_pred             CCCCeEecccchheeccCCCceeecceecCcccCChHHhcCCCCCchhhhcchHHHH-HHHHHCCCCCCCCCC
Confidence            999999999999876654433333334678899999999999999999999999999 99998 577776544

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-38  Score=220.72  Aligned_cols=144  Identities=22%  Similarity=0.313  Sum_probs=118.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++|++.+ +.+++|||||++|+|.+++...+    ..+++..+..++.|++.|+.|||   +++++||||||+|||++
T Consensus        67 v~~~~~~~~-~~~~lv~Ey~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~gl~yLH---~~~ivHrDlKp~NiLl~  138 (276)
T d1uwha_          67 LLFMGYSTA-PQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLH  138 (276)
T ss_dssp             CCEEEEECS-SSCEEEEECCCEEEHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEE
T ss_pred             eeeeEEEec-cEEEEEEecCCCCCHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHh---cCCEeccccCHHHEEEc
Confidence            578888765 67899999999999999987543    45889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccC---CCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATG---DCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~---~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+..+||+|||++........ .......+|+.|+|||.+.+.   .++.++|||||||++ |||++|+.||.+.+.
T Consensus       139 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l-~el~tg~~Pf~~~~~  214 (276)
T d1uwha_         139 EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL-YELMTGQLPYSNINN  214 (276)
T ss_dssp             TTSSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHH-HHHHHSSCTTTTCCC
T ss_pred             CCCCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHH-HHHHHCCCCCCCCCh
Confidence            999999999999876543222 222345689999999998643   478999999999999 999999999987543

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-38  Score=223.90  Aligned_cols=145  Identities=21%  Similarity=0.257  Sum_probs=124.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++|||||++|+|.+.+....    .++++.++..++.|++.|+.|||   +++++||||||+||+++
T Consensus        72 v~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~~~----~~l~e~~~~~i~~qi~~gL~ylH---~~~ivHrDiKp~NIll~  144 (288)
T d2jfla1          72 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELE----RPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFT  144 (288)
T ss_dssp             CCEEEEEEETTEEEEEEECCTTEEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEC
T ss_pred             CeEEEEEeeCCeEEEEEecCCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEEeecChhheeEC
Confidence            689999999999999999999999999875432    46899999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccc-----cCCCCCCcceEeccccccCcceecccccccCCCc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA-----TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWK  154 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~-----~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~  154 (159)
                      .++.+||+|||++........ ......|++.|+|||.+.     +..++.++||||+||++ |+|++|+.||.+.+..
T Consensus       145 ~~~~~Kl~DFG~a~~~~~~~~-~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvil-yemltg~~Pf~~~~~~  221 (288)
T d2jfla1         145 LDGDIKLADFGVSAKNTRTIQ-RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITL-IEMAEIEPPHHELNPM  221 (288)
T ss_dssp             TTSCEEECCCTTCEECHHHHH-HHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHH-HHHHHSSCTTTTSCGG
T ss_pred             CCCCEEEEechhhhccCCCcc-cccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHH-HHHhhCCCCCCCCCHH
Confidence            999999999999865532211 123456899999999984     45678999999999999 9999999999876543

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.4e-38  Score=222.70  Aligned_cols=141  Identities=26%  Similarity=0.342  Sum_probs=114.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++.+++|||||++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||++.
T Consensus        70 v~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp~Nil~~  141 (307)
T d1a06a_          70 VALDDIYESGGHLYLIMQLVSGGELFDRIVEK-----GFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYY  141 (307)
T ss_dssp             CCEEEEEECSSEEEEEECCCCSCBHHHHHHTC-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEES
T ss_pred             CcEEEEEEECCEEEEEEeccCCCcHHHhhhcc-----cCCCHHHHHHHHHHHHHHHHhhh---hceeeeEEecccceeec
Confidence            68999999999999999999999999999754     46899999999999999999999   89999999999999995


Q ss_pred             ---CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 ---EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ---~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                         .++.+|++|||++.......  ......||+.|+|||.+.+..++.++|+||+||++ |+|++|+.||.+.+
T Consensus       142 ~~~~~~~vkl~DFG~a~~~~~~~--~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvil-yell~g~~Pf~~~~  213 (307)
T d1a06a_         142 SLDEDSKIMISDFGLSKMEDPGS--VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA-YILLCGYPPFYDEN  213 (307)
T ss_dssp             SSSTTCCEEECCC--------------------CTTSCHHHHTTCCCCTHHHHHHHHHHH-HHHHHSSCSCCCSS
T ss_pred             ccCCCceEEEeccceeEEccCCC--eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHH-HHHHhCCCCCCCCC
Confidence               45789999999987654322  22345689999999999999999999999999999 99999999998764

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.5e-37  Score=221.16  Aligned_cols=139  Identities=25%  Similarity=0.471  Sum_probs=125.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++.+++|||||++|++.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        67 v~~~~~~~~~~~~~ivmE~~~gg~l~~~~~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~~iiHrDiKp~NILl~  138 (316)
T d1fota_          67 IRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS-----QRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLD  138 (316)
T ss_dssp             CCEEEEEECSSEEEEEECCCCSCBHHHHHHHT-----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEEC
T ss_pred             hheeeeEeeCCeeeeEeeecCCcccccccccc-----ccccccHHHHHHHHHHHhhhhhc---cCcEEccccCchheeEc
Confidence            68999999999999999999999999888764     45678888889999999999999   99999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+||+|||++.......    ....|++.|+|||.+.+..++.++|+||+||++ |+|++|+.||.+.+
T Consensus       139 ~~g~vkL~DFG~a~~~~~~~----~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvil-yemltG~~Pf~~~~  205 (316)
T d1fota_         139 KNGHIKITDFGFAKYVPDVT----YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILI-YEMLAGYTPFYDSN  205 (316)
T ss_dssp             TTSCEEECCCSSCEECSSCB----CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHH-HHHHHSSCTTCCSS
T ss_pred             CCCCEEEecCccceEecccc----ccccCcccccCHHHHcCCCCCchhhccccchhH-HHHHhCCCCCCCcC
Confidence            99999999999988764432    235689999999999999999999999999999 99999999998765

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=9.5e-38  Score=220.78  Aligned_cols=145  Identities=21%  Similarity=0.254  Sum_probs=116.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++|+|.+++..++|||||++|+|.+++....    ..+++.++..++.|++.||.|||   +++++||||||+|||++
T Consensus        90 v~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~----~~l~~~~~~~i~~qia~gl~yLH---~~~iiHrDlKp~NILl~  162 (299)
T d1jpaa_          90 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQND----GQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRDLAARNILVN  162 (299)
T ss_dssp             CCEEEEECSSSSCEEEEECCTTEEHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEC
T ss_pred             ccEEEEEeeCCEEEEEEEecCCCcceeeecccc----CCCCHHHHHHHHHHHHHHHHHHh---hCCCccCccccceEEEC
Confidence            689999999999999999999999999887543    45889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCccee----eeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRI----RGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~----~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~  153 (159)
                      .+..+||+|||+++.........    .....+++.|+|||.+.+..++.++|||||||++ |||++ |+.||.+.+.
T Consensus       163 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl-~el~t~g~~Pf~~~~~  239 (299)
T d1jpaa_         163 SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVM-WEVMSYGERPYWDMTN  239 (299)
T ss_dssp             TTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHH-HHHHTTSCCTTTTCCH
T ss_pred             CCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHH-HHHHhCCCCCCCCCCH
Confidence            99999999999987654332111    1123467889999999999999999999999999 99997 8999987653

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.6e-37  Score=218.43  Aligned_cols=145  Identities=22%  Similarity=0.337  Sum_probs=124.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++|+|.+++..+++|||+++|+|.+.+.....   ..+++..+..++.|++.|+.|||   +++++||||||+|||++
T Consensus        76 v~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~---~~~~~~~~~~i~~qi~~gL~yLH---~~~iiHrDlKp~NILl~  149 (287)
T d1opja_          76 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR---QEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVG  149 (287)
T ss_dssp             CCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCT---TTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEC
T ss_pred             ecCCccEeeCCeeEEEeecccCcchHHHhhhccc---cchHHHHHHHHHHHHHHHHHHHH---HCCcccCccccCeEEEC
Confidence            6899999999999999999999999998875432   56888899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecc-cccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGR-AWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~-~p~~~~~  152 (159)
                      .++.+||+|||+++..............++..|+|||.+.+..++.++||||||+++ |+|++|. +||.+.+
T Consensus       150 ~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l-~ell~~~~p~~~~~~  221 (287)
T d1opja_         150 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL-WEIATYGMSPYPGID  221 (287)
T ss_dssp             GGGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHH-HHHHTTSCCSSTTCC
T ss_pred             CCCcEEEccccceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHH-HHHHhCCCCCCCcch
Confidence            999999999999987655443333334577889999999999999999999999999 9999965 4555543

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=3.1e-37  Score=222.32  Aligned_cols=143  Identities=21%  Similarity=0.289  Sum_probs=125.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++.+++|||||++|+|.+.+....    .++++.++..++.|++.|+.|||   +++++||||||+|||++
T Consensus        89 v~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~~~----~~l~e~~~~~i~~qi~~aL~ylH---~~~iiHRDiKp~NILl~  161 (352)
T d1koba_          89 INLHDAFEDKYEMVLILEFLSGGELFDRIAAED----YKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCE  161 (352)
T ss_dssp             CCEEEEEECSSEEEEEEECCCCCBHHHHTTCTT----CCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEES
T ss_pred             CcEEEEEEECCEEEEEEEcCCCChHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccccccccccc
Confidence            689999999999999999999999988775432    46899999999999999999999   89999999999999997


Q ss_pred             --CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 --EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 --~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                        .++.+||+|||++........  .....+++.|+|||.+.+..++.++|+||+||++ |+|++|+.||.+.+.
T Consensus       162 ~~~~~~vkL~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil-yelltG~~Pf~~~~~  233 (352)
T d1koba_         162 TKKASSVKIIDFGLATKLNPDEI--VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLG-YVLLSGLSPFAGEDD  233 (352)
T ss_dssp             STTCCCEEECCCTTCEECCTTSC--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHH-HHHHHSCCSSCCSSH
T ss_pred             ccCCCeEEEeecccceecCCCCc--eeeccCcccccCHHHHcCCCCCCccchHHHHHHH-HHHHhCCCCCCCCCH
Confidence              457899999999987754332  2345688999999999999999999999999999 999999999987653

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=2.7e-37  Score=222.51  Aligned_cols=142  Identities=18%  Similarity=0.313  Sum_probs=125.4

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++.+++|||||++|+|.+.+....    ..+++..+..++.|++.||.|||   +++++||||||+||+++
T Consensus        86 v~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~----~~l~e~~~~~i~~qi~~aL~ylH---~~~iiHrDiKp~NIll~  158 (350)
T d1koaa2          86 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH----NKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFT  158 (350)
T ss_dssp             CCEEEEEEETTEEEEEECCCCSCBHHHHHTCTT----SCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEES
T ss_pred             CcEEEEEEECCEEEEEEEcCCCCCHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHH---hcCCeeeeechhHeeec
Confidence            688999999999999999999999999886432    46899999999999999999999   89999999999999996


Q ss_pred             C--CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 E--QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~--~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .  ++.+||+|||++........  .....+|+.|+|||++.+..++.++|+||+||++ |+|++|+.||.+.+
T Consensus       159 ~~~~~~vkL~DFG~a~~~~~~~~--~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvil-yell~G~~Pf~~~~  229 (350)
T d1koaa2         159 TKRSNELKLIDFGLTAHLDPKQS--VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLS-YILLSGLSPFGGEN  229 (350)
T ss_dssp             STTSCCEEECCCTTCEECCTTSC--EEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             cCCCCeEEEeecchheecccccc--cceecCcccccCHHHHcCCCCChhHhhhhhhHHH-HHHHhCCCCCCCCC
Confidence            4  46899999999887654332  2345689999999999999999999999999999 99999999998764

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-37  Score=220.35  Aligned_cols=143  Identities=27%  Similarity=0.385  Sum_probs=127.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..|+||||+++|+|.+++...     ..+++.++..++.|++.|+.|||   +++++|||+||+||+++
T Consensus        66 v~~~~~~~~~~~~yivmEy~~~g~L~~~i~~~-----~~~~e~~~~~~~~qi~~al~ylH---~~~iiHrDikp~NiL~~  137 (320)
T d1xjda_          66 THMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLD  137 (320)
T ss_dssp             CCEEEEEECSSEEEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEEC
T ss_pred             EEEEEEEccCCceeEEEeecCCCcHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCcccceeec
Confidence            68999999999999999999999999998754     45788999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.+|++|||++......... .....|++.|+|||.+.+..++.++|+||+||++ |+|++|+.||.+.+.
T Consensus       138 ~~~~~kl~DFG~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil-yemltG~~PF~~~~~  208 (320)
T d1xjda_         138 KDGHIKIADFGMCKENMLGDAK-TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLL-YEMLIGQSPFHGQDE  208 (320)
T ss_dssp             TTSCEEECCCTTCBCCCCTTCC-BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHH-HHHHHSSCSSCCSSH
T ss_pred             CCCceeccccchhhhccccccc-ccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHH-HHHHhCCCCCCCCCH
Confidence            9999999999998766543322 2345689999999999999999999999999999 999999999987653

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-37  Score=218.38  Aligned_cols=144  Identities=25%  Similarity=0.408  Sum_probs=124.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++|+|.+ +.+++||||+++|+|.+++...+    ..+++..+..++.|++.||.|||   +++++||||||+||+++
T Consensus        72 v~l~g~~~~-~~~~lvmE~~~~g~L~~~l~~~~----~~l~~~~~~~i~~qi~~gL~ylH---~~~iiHrDlKp~Nill~  143 (285)
T d1u59a_          72 VRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLV  143 (285)
T ss_dssp             CCEEEEEES-SSEEEEEECCTTEEHHHHHTTCT----TTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEE
T ss_pred             eeEeeeecc-CeEEEEEEeCCCCcHHHHhhccc----cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCcCchhheeec
Confidence            689999865 57899999999999999876543    46889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcce--eeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~  153 (159)
                      .+..+|++|||+++........  ......+++.|+|||.+.+..++.++|||||||++ |||++ |+.||.+.+.
T Consensus       144 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l-~E~lt~G~~Pf~~~~~  218 (285)
T d1u59a_         144 NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTM-WEALSYGQKPYKKMKG  218 (285)
T ss_dssp             ETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHH-HHHHTTSCCTTTTCCT
T ss_pred             cCCceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHH-HHHHhCCCCCCCCCCH
Confidence            9999999999999876543322  12334578899999999989999999999999999 99987 8999987653

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-38  Score=221.67  Aligned_cols=150  Identities=19%  Similarity=0.272  Sum_probs=113.0

Q ss_pred             CeEEEEEec--CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcC--CCCeEEecCCCCC
Q 031436            1 MRLIGCCLE--TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF--SRPIVFRNVKPSN   76 (159)
Q Consensus         1 v~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--~~~~~h~~l~~~n   76 (159)
                      |++++++.+  ++.+++|||||++|+|.+.+..... ....+++..+..++.|++.|+.|||+..  ..+++||||||+|
T Consensus        66 v~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~-~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~N  144 (269)
T d2java1          66 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN  144 (269)
T ss_dssp             CCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGG
T ss_pred             eeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhh
Confidence            678998865  4568999999999999998864211 1156899999999999999999999320  1249999999999


Q ss_pred             EEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           77 ILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        77 il~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      |+++.++.+|++|||+++........ .....+++.|+|||.+.+..++.++|||||||++ |+|++|+.||.+.+.
T Consensus       145 Ill~~~~~vkl~DFG~a~~~~~~~~~-~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvil-yel~tg~~Pf~~~~~  219 (269)
T d2java1         145 VFLDGKQNVKLGDFGLARILNHDTSF-AKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLL-YELCALMPPFTAFSQ  219 (269)
T ss_dssp             EEECTTSCEEECCHHHHHHC------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHH-HHHHHSSCSCCCSSH
T ss_pred             cCcCCCCcEEEeeccceeecccCCCc-cccCCCCcccCCHHHHcCCCCChHHHHHhhCHHH-HHHhhCCCCCCCCCH
Confidence            99999999999999998776443222 2345689999999999999999999999999999 999999999987654

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.2e-37  Score=223.22  Aligned_cols=141  Identities=20%  Similarity=0.322  Sum_probs=124.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++.+|+|||||++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+|||++
T Consensus        70 v~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~~-----~~~~e~~~~~~~~qi~~aL~ylH---~~~iiHrDlKP~NILl~  141 (364)
T d1omwa3          70 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH-----GVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLD  141 (364)
T ss_dssp             CCEEEEEECSSEEEEEECCCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEC
T ss_pred             EEEEEEEEECCEEEEEEEecCCCcHHHHHHhc-----ccccHHHHHHHHHHHHHHHHHHH---HCCccceeeccceeEEc
Confidence            67899999999999999999999999998754     45788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++.+||+|||++........   ....|++.|+|||.+.. ..++.++|+||+||++ |+|++|+.||.+.+.
T Consensus       142 ~~g~iKl~DFGla~~~~~~~~---~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvil-yemltG~~Pf~~~~~  211 (364)
T d1omwa3         142 EHGHVRISDLGLACDFSKKKP---HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCML-FKLLRGHSPFRQHKT  211 (364)
T ss_dssp             SSSCEEECCCTTCEECSSSCC---CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHH-HHHHHSSCSSCSSCS
T ss_pred             CCCcEEEeeeceeeecCCCcc---cccccccccchhHHhhcCCCCCcccchhHHHHHH-HHHHhCCCCCCCCCH
Confidence            999999999999886654322   23468999999999864 5689999999999999 999999999987654

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-37  Score=217.61  Aligned_cols=142  Identities=26%  Similarity=0.394  Sum_probs=121.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++|+|.+ +..++||||+++|+|.+++...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        71 v~~~g~~~~-~~~~lvmE~~~~g~L~~~l~~~-----~~l~~~~~~~i~~qi~~gl~ylH---~~~iiHrDlKp~Nill~  141 (277)
T d1xbba_          71 VRMIGICEA-ESWMLVMEMAELGPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLV  141 (277)
T ss_dssp             CCEEEEEES-SSEEEEEECCTTEEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEE
T ss_pred             ceEEEEecc-CCEEEEEEcCCCCcHHHHHhhc-----cCCCHHHHHHHHHHHHHHHhhHH---hCCcccCCCcchhhccc
Confidence            689999865 5678999999999999988754     45889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcce--eeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~  152 (159)
                      .++.+|++|||+++........  ......+++.|+|||.+.+..++.++||||||+++ |||++ |+.||.+.+
T Consensus       142 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l-~ellt~g~~Pf~~~~  215 (277)
T d1xbba_         142 TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLM-WEAFSYGQKPYRGMK  215 (277)
T ss_dssp             ETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHH-HHHHTTTCCSSTTCC
T ss_pred             ccCcccccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhh-hHHhhCCCCCCCCCC
Confidence            9999999999999876543322  12334578899999999999999999999999999 99987 899998764

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-37  Score=213.17  Aligned_cols=139  Identities=23%  Similarity=0.297  Sum_probs=118.0

Q ss_pred             CeEEEEEec----CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCC--eEEecCCC
Q 031436            1 MRLIGCCLE----TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRP--IVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~--~~h~~l~~   74 (159)
                      |+++++|.+    ++.+++||||+++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++  ++||||||
T Consensus        71 v~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~-----~~~~~~~~~~~~~qi~~gl~yLH---~~~~~IiHrDiKp  142 (270)
T d1t4ha_          71 VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKC  142 (270)
T ss_dssp             CCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCG
T ss_pred             eeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhcc-----ccccHHHHHHHHHHHHHHHHHHH---HCCCCEEeCCcCh
Confidence            678898864    34578999999999999998754     45888999999999999999999   777  99999999


Q ss_pred             CCEEec-CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           75 SNILFQ-EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        75 ~nil~~-~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +||+++ .+..+|++|||++.......   .....||+.|+|||.+.+ +++.++||||+||++ |+|++|+.||...+
T Consensus       143 ~NILl~~~~~~~Kl~DFGla~~~~~~~---~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvil-yel~~g~~Pf~~~~  216 (270)
T d1t4ha_         143 DNIFITGPTGSVKIGDLGLATLKRASF---AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCM-LEMATSEYPYSECQ  216 (270)
T ss_dssp             GGEEESSTTSCEEECCTTGGGGCCTTS---BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHH-HHHHHSSCTTTTCS
T ss_pred             hhceeeCCCCCEEEeecCcceeccCCc---cCCcccCccccCHHHhCC-CCCCcCchhhHHHHH-HHHHHCCCCCCCcc
Confidence            999996 46789999999987543322   224578999999998865 599999999999999 99999999997643

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.8e-37  Score=218.43  Aligned_cols=138  Identities=26%  Similarity=0.360  Sum_probs=120.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++|||||.+|++.......     .++++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        78 v~~~~~~~~~~~~~iv~E~~~~g~l~~~~~~~-----~~l~e~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp~NILl~  149 (309)
T d1u5ra_          78 IQYRGCYLREHTAWLVMEYCLGSASDLLEVHK-----KPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLS  149 (309)
T ss_dssp             CCEEEEEEETTEEEEEEECCSEEHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEE
T ss_pred             eeEEEEEEECCEEEEEEEecCCCchHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEC
Confidence            68999999999999999999988887655443     46899999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc---CCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT---GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~---~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+|++|||++......     ....||+.|+|||.+.+   ..++.++|||||||++ |+|++|+.||.+.+
T Consensus       150 ~~~~~Kl~DFG~a~~~~~~-----~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvil-yel~~g~~Pf~~~~  218 (309)
T d1u5ra_         150 EPGLVKLGDFGSASIMAPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC-IELAERKPPLFNMN  218 (309)
T ss_dssp             TTTEEEECCCTTCBSSSSB-----CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHH-HHHHHSSCTTTTSC
T ss_pred             CCCCEEEeecccccccCCC-----CccccCccccCHHHHhccCCCCcCchhhhhhHHHHH-HHHHHCCCCCCCCC
Confidence            9999999999998765432     23468999999999864   3588999999999999 99999999997754

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=7.6e-37  Score=220.22  Aligned_cols=139  Identities=22%  Similarity=0.318  Sum_probs=125.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+.+..+++|||+.+|+|.+.+...     ..+++..+..++.|++.||.|||   +++++||||||+|||++
T Consensus       104 v~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~~-----~~l~e~~~~~i~~qi~~aL~yLH---~~~iiHRDIKP~NILl~  175 (350)
T d1rdqe_         104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI-----GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLID  175 (350)
T ss_dssp             CCEEEEEECSSEEEEEEECCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEC
T ss_pred             eecccccccccccccccccccccchhhhHhhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCcCCHHHcccC
Confidence            67899999999999999999999999988754     45889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+||+|||+++......    ....|++.|+|||++.+..++.++|+||+||++ |+|++|+.||.+.+
T Consensus       176 ~~g~ikL~DFG~a~~~~~~~----~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvil-yemltG~~Pf~~~~  242 (350)
T d1rdqe_         176 QQGYIQVTDFGFAKRVKGRT----WTLCGTPEALAPEIILSKGYNKAVDWWALGVLI-YEMAAGYPPFFADQ  242 (350)
T ss_dssp             TTSCEEECCCTTCEECSSCB----CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             CCCCEEeeeceeeeeccccc----ccccCccccCCHHHHcCCCCCccccccchhHHH-HHHHhCCCCCCCcC
Confidence            99999999999998764332    234689999999999999999999999999999 99999999998764

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-37  Score=220.31  Aligned_cols=144  Identities=25%  Similarity=0.361  Sum_probs=123.6

Q ss_pred             CeEEEEEec----CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCC
Q 031436            1 MRLIGCCLE----TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSN   76 (159)
Q Consensus         1 v~l~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~n   76 (159)
                      |++++++.+    ++.+|+|||||++|+|.+.+.....   ..+++.++..++.|++.|+.|||   +++++||||||+|
T Consensus        68 v~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~---~~l~e~~~~~i~~qi~~al~ylH---~~~iiHRDiKp~N  141 (335)
T d2ozaa1          68 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN  141 (335)
T ss_dssp             CCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSC---CCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGG
T ss_pred             CeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhcCC---CCcCHHHHHHHHHHHHHHHHHHH---HcCCccccccccc
Confidence            578888865    4568999999999999999975422   56999999999999999999999   8999999999999


Q ss_pred             EEecC---CCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           77 ILFQE---QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        77 il~~~---~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      |+++.   ...+|++|||++........  .....|++.|+|||.+.+..++.++|+||+||++ |+|++|+.||.+.+.
T Consensus       142 Ill~~~~~~~~~Kl~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvil-y~lltg~~Pf~~~~~  218 (335)
T d2ozaa1         142 LLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM-YILLCGYPPFYSNHG  218 (335)
T ss_dssp             EEESCSSTTCCEEECCCTTCEECCCCCC--CCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHH-HHHTTSSCSCEETTC
T ss_pred             cccccccccccccccccceeeeccCCCc--cccccCCcccCCcHHHcCCCCCHHHHHHhhchhH-HHHhhCCCCCCCCCH
Confidence            99975   35699999999876654332  2345689999999999999999999999999999 999999999987653

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-37  Score=215.26  Aligned_cols=144  Identities=28%  Similarity=0.391  Sum_probs=121.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++|+|.+ +..++||||+++|+|.+.+.....   ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        71 v~~~g~~~~-~~~~iv~Ey~~~g~L~~~~~~~~~---~~l~~~~~~~i~~qi~~gl~~lH---~~~ivHrDiKp~NIll~  143 (272)
T d1qpca_          71 VRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVS  143 (272)
T ss_dssp             CCEEEEECS-SSCEEEEECCTTCBHHHHTTSHHH---HTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC
T ss_pred             eEEEeeecc-CCeEEEEEeCCCCcHHHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccchhheeee
Confidence            688998865 678999999999999987754321   35889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceec-ccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTG-RAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g-~~p~~~~~  152 (159)
                      .+..+||+|||+++..............+++.|+|||.+.+..++.++||||||+++ |||++| ++||...+
T Consensus       144 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl-~ellt~~~~~~~~~~  215 (272)
T d1qpca_         144 DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL-TEIVTHGRIPYPGMT  215 (272)
T ss_dssp             TTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHH-HHHHTTTCCSSTTCC
T ss_pred             cccceeeccccceEEccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHH-HHHHhCCCCCCCCCC
Confidence            999999999999987654443333344678899999999988999999999999999 999995 66666544

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-36  Score=214.52  Aligned_cols=142  Identities=23%  Similarity=0.335  Sum_probs=124.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++++|.+++..++|||||++|+|.+.+...     ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        76 v~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~~-----~~l~~~~~~~~~~qi~~al~yLH---~~~ivHrDiKp~Nill~  147 (293)
T d1jksa_          76 ITLHEVYENKTDVILILELVAGGELFDFLAEK-----ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLL  147 (293)
T ss_dssp             CCEEEEEECSSEEEEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEES
T ss_pred             CcEEEEEEECCEEEEEEEcCCCccccchhccc-----cccchhHHHHHHHHHHHHHHhhh---hcceeecccccceEEEe
Confidence            68999999999999999999999999998754     46899999999999999999999   89999999999999998


Q ss_pred             CCC----ceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQS----VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~~----~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .++    .+|++|||++........  .....+++.|+|||.+.+..++.++|+||+||++ |+|++|+.||.+.+.
T Consensus       148 ~~~~~~~~vkl~DfG~a~~~~~~~~--~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvil-yell~g~~Pf~~~~~  221 (293)
T d1jksa_         148 DRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT-YILLSGASPFLGDTK  221 (293)
T ss_dssp             CSSSSSCCEEECCCTTCEECTTSCB--CSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHH-HHHHHSSCSSCCSSH
T ss_pred             cCCCcccceEecchhhhhhcCCCcc--ccccCCCCcccCHHHHcCCCCCCcccchhhhHHH-HHHHcCCCCCCCCCH
Confidence            664    589999999877643322  2234678899999999999999999999999999 999999999987653

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.9e-37  Score=211.45  Aligned_cols=145  Identities=21%  Similarity=0.336  Sum_probs=126.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++|+|.+++.+++||||+++|+|.+.+....    ..+++..+..++.|++.|+.|||   +++++||||+|+||+++
T Consensus        62 v~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~~~----~~~~~~~~~~i~~qi~~gl~~LH---~~~iiH~dlk~~Nill~  134 (258)
T d1k2pa_          62 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMR----HRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVN  134 (258)
T ss_dssp             CCEEEEECCSSSEEEEEECCTTEEHHHHHHSGG----GCCCHHHHHHHHHHHHHHHHHHH---HTTBCCSCCSGGGEEEC
T ss_pred             eeEEEEEeeCCceEEEEEccCCCcHHHhhhccc----cCCcHHHHHHHHHHHHHHHHHHh---hcCcccccccceeEEEc
Confidence            689999999999999999999999998876543    45778888999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDW  153 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~  153 (159)
                      .+..+|++|||++...............++..|+|||.+.+..++.++||||||+++ |||++ |+.||.+.+.
T Consensus       135 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l-~el~t~g~~Pf~~~~~  207 (258)
T d1k2pa_         135 DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM-WEIYSLGKMPYERFTN  207 (258)
T ss_dssp             TTCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTSCCTTTTSCH
T ss_pred             CCCcEEECcchhheeccCCCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhh-HhHHhcCCCCCCCCCH
Confidence            999999999999876654433333335678899999999999999999999999999 99997 8999987653

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=6.6e-36  Score=209.17  Aligned_cols=141  Identities=28%  Similarity=0.343  Sum_probs=124.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..|+||||+++|+|.+++...     ..+++.++..++.|++.|+.|||   +++++||||||+||+++
T Consensus        73 v~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~  144 (277)
T d1phka_          73 IQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLD  144 (277)
T ss_dssp             CCEEEEEECSSEEEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC
T ss_pred             EEEEeecccCcceEEEEEcCCCchHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HcCCcccccccceEEEc
Confidence            67899999999999999999999999999754     46899999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCcccccc------CCCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT------GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~------~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+||+|||++........  .....|+..|+|||.+.+      ..++.++|+||+||++ |+|++|+.||.+.+
T Consensus       145 ~~~~~kl~DFG~a~~~~~~~~--~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvil-yeml~g~~Pf~~~~  219 (277)
T d1phka_         145 DDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM-YTLLAGSPPFWHRK  219 (277)
T ss_dssp             TTCCEEECCCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             CCCCeEEccchheeEccCCCc--eeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhh-hhhccCCCCCCCCC
Confidence            999999999999987654322  223468899999999853      3468899999999999 99999999998765

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-36  Score=210.77  Aligned_cols=145  Identities=19%  Similarity=0.269  Sum_probs=114.1

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++|+|. ++.+++||||+++|++.+.+....    ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        71 v~l~~~~~-~~~~~iv~E~~~~g~l~~~~~~~~----~~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDlKp~NIll~  142 (273)
T d1mp8a_          71 VKLIGVIT-ENPVWIIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVS  142 (273)
T ss_dssp             CCEEEEEC-SSSCEEEEECCTTEEHHHHHHHTT----TTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEE
T ss_pred             eeEEEEEe-cCeEEEEEEeccCCcHHhhhhccC----CCCCHHHHHHHHHHHHHHhhhhc---ccCeeccccchhheeec
Confidence            67899986 478899999999999998876533    46889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCCc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDWK  154 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~~  154 (159)
                      .+..+|++|||+++..............+++.|+|||.+.+..++.++||||||+++ |||++ |.+||.+.+.+
T Consensus       143 ~~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil-~e~lt~g~~P~~~~~~~  216 (273)
T d1mp8a_         143 SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM-WEILMHGVKPFQGVKNN  216 (273)
T ss_dssp             ETTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHH-HHHHTTSCCTTTTCCGG
T ss_pred             CCCcEEEccchhheeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHH-HHHHhcCCCCCCCCCHH
Confidence            999999999999886654333333445678899999999999999999999999999 99887 89999887654

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-35  Score=211.63  Aligned_cols=143  Identities=19%  Similarity=0.288  Sum_probs=125.2

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++.+|+|||||++|+|.+.+....    ..+++.++..++.|++.|+.|||   +.+++||||||+||+++
T Consensus        64 v~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~~~----~~l~e~~~~~i~~qi~~al~yLH---~~~iiHrDlKp~NIll~  136 (321)
T d1tkia_          64 LHLHESFESMEELVMIFEFISGLDIFERINTSA----FELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQ  136 (321)
T ss_dssp             CCEEEEEEETTEEEEEECCCCCCBHHHHHTSSS----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEES
T ss_pred             CeEEEEEEECCEEEEEEecCCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HcCCCcccccccceeec
Confidence            689999999999999999999999999986542    46899999999999999999999   89999999999999997


Q ss_pred             CC--CceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 EQ--SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 ~~--~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                      .+  ..+|++|||++........  .....+++.|+|||...+..++.++|+||+||++ |+|++|+.||.+.+.
T Consensus       137 ~~~~~~ikl~DFG~~~~~~~~~~--~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvil-y~ll~G~~Pf~~~~~  208 (321)
T d1tkia_         137 TRRSSTIKIIEFGQARQLKPGDN--FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLV-YVLLSGINPFLAETN  208 (321)
T ss_dssp             SSSCCCEEECCCTTCEECCTTCE--EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHH-HHHHHSSCTTCCSSH
T ss_pred             CCCceEEEEcccchhhccccCCc--ccccccccccccchhccCCCCCchhhcccHHHHH-HHHHhCCCCCCCCCH
Confidence            54  4789999999887644332  2334678899999999999999999999999999 999999999987653

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-35  Score=209.79  Aligned_cols=150  Identities=21%  Similarity=0.347  Sum_probs=116.9

Q ss_pred             CeEEEEEec-CCCceEEEEecCCCChHHHhhCCCC-----------CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeE
Q 031436            1 MRLIGCCLE-TENPVLVFEYVEYGTLADRIYHPRQ-----------PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV   68 (159)
Q Consensus         1 v~l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~-----------~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~   68 (159)
                      |++++++.+ ++.++++||||++|+|.+++...+.           .....+++.++..++.|++.|+.|||   +++++
T Consensus        80 v~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~iv  156 (299)
T d1ywna1          80 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCI  156 (299)
T ss_dssp             CCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHH---HTTCC
T ss_pred             EEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHH---hCCCc
Confidence            456777765 4568999999999999999865321           01135788999999999999999999   89999


Q ss_pred             EecCCCCCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCcceec-cc
Q 031436           69 FRNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTG-RA  146 (159)
Q Consensus        69 h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g-~~  146 (159)
                      ||||||+||+++.+..+||+|||+++....... .......||+.|+|||.+.+..++.++|||||||++ |||+++ .+
T Consensus       157 HrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil-~ellt~~~~  235 (299)
T d1ywna1         157 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL-WEIFSLGAS  235 (299)
T ss_dssp             CSCCCGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTSCC
T ss_pred             CCcCCccceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHH-HHHHhCCCC
Confidence            999999999999999999999999876544332 222345688999999999999999999999999999 999986 57


Q ss_pred             ccccCCCc
Q 031436          147 WYRSEDWK  154 (159)
Q Consensus       147 p~~~~~~~  154 (159)
                      ||.+.+..
T Consensus       236 p~~~~~~~  243 (299)
T d1ywna1         236 PYPGVKID  243 (299)
T ss_dssp             SSTTCCCS
T ss_pred             CCCCCCHH
Confidence            88876543

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-35  Score=208.66  Aligned_cols=142  Identities=22%  Similarity=0.248  Sum_probs=120.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++||||+.++++.......     ..+++..+..++.|++.|++|||   +++++||||||+||+++
T Consensus        63 v~~~~~~~~~~~~~ivmE~~~~~~~~~~~~~~-----~~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDiKp~NIli~  134 (299)
T d1ua2a_          63 IGLLDAFGHKSNISLVFDFMETDLEVIIKDNS-----LVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLD  134 (299)
T ss_dssp             CCEEEEECCTTCCEEEEECCSEEHHHHHTTCC-----SSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEC
T ss_pred             eEEEeeeccCCceeehhhhhcchHHhhhhhcc-----cCCCHHHHHHHHHHHHHHHHHhh---ccceecccCCcceEEec
Confidence            68999999999999999999876665554322     56888999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..+|++|||.+......... .....+++.|+|||.+... .++.++||||+||++ |+|++|+.||.+.+
T Consensus       135 ~~~~~KL~DFG~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil-~el~~g~~pf~~~~  205 (299)
T d1ua2a_         135 ENGVLKLADFGLAKSFGSPNRA-YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCIL-AELLLRVPFLPGDS  205 (299)
T ss_dssp             TTCCEEECCCGGGSTTTSCCCC-CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             CCCccccccCccccccCCCccc-ccceecChhhccHHHHccCCCCChhhhhhhcchHH-HHHHhCcCCCCCCC
Confidence            9999999999998766543322 2234688999999998754 579999999999999 99999999997654

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.5e-35  Score=207.51  Aligned_cols=143  Identities=25%  Similarity=0.426  Sum_probs=115.8

Q ss_pred             CeEEEEEecCCC----ceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCC
Q 031436            1 MRLIGCCLETEN----PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSN   76 (159)
Q Consensus         1 v~l~~~~~~~~~----~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~n   76 (159)
                      |++++++...+.    +|+||||+++++|.+.+...     ..+++.++..++.|++.|+.|||   +++++||||||+|
T Consensus        70 v~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~-----~~l~~~~~~~i~~qi~~al~~lH---~~~iiHrDiKP~N  141 (277)
T d1o6ya_          70 VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPAN  141 (277)
T ss_dssp             CCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGG
T ss_pred             CcccceeeeccCCCceEEEEEECCCCCEehhhhccc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCccCccccCcc
Confidence            577888876443    78999999999999888654     46889999999999999999999   8999999999999


Q ss_pred             EEecCCCceEEEecCCCcccCCCcc--eeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           77 ILFQEQSVAKLFDFSYSESIPEGET--RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        77 il~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      |+++.+...+++|||.+........  .......|++.|+|||.+.+..++.++|+||+||++ |+|++|+.||.+.+
T Consensus       142 Ill~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvil-yelltG~~Pf~~~~  218 (277)
T d1o6ya_         142 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL-YEVLTGEPPFTGDS  218 (277)
T ss_dssp             EEEETTSCEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHH-HHHHHSSCSCCCSS
T ss_pred             cccCccccceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHH-HHHHhCCCCCCCcC
Confidence            9999999999999998765433221  223345689999999999999999999999999999 99999999998764

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-35  Score=206.64  Aligned_cols=143  Identities=22%  Similarity=0.263  Sum_probs=115.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++|+|.+.+..+++|||+.++++.+.+....    ..+++.++..++.|++.|+.|||   +++++||||||+|||++
T Consensus        72 v~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~~~----~~~~~~~~~~i~~~i~~gl~~lH---~~~iiHrDlKp~NILl~  144 (283)
T d1mqba_          72 IRLEGVISKYKPMMIITEYMENGALDKFLREKD----GEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVN  144 (283)
T ss_dssp             CCEEEEECSSSSEEEEEECCTTEEHHHHHHHTT----TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEC
T ss_pred             eeeeEEEecCCceEEEEEecccCcchhhhhccc----ccccHHHHHHHHHHHHHhhhhcc---ccccccCccccceEEEC
Confidence            689999999999999999999999988776543    46888999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcce--eeeeecccccccCccccccCCCCCCcceEeccccccCcceec-ccccccC
Q 031436           81 EQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTG-RAWYRSE  151 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g-~~p~~~~  151 (159)
                      .+..+||+|||+++........  ......++..|+|||.+.+..++.++||||||+++ |||+++ .+|+...
T Consensus       145 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil-~el~t~~~~~~~~~  217 (283)
T d1mqba_         145 SNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVM-WEVMTYGERPYWEL  217 (283)
T ss_dssp             TTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHH-HHHHTTSCCTTTTC
T ss_pred             CCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHH-HHHHhCCCCccccC
Confidence            9999999999998765433221  12233568889999999999999999999999999 999985 4555443

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-35  Score=206.28  Aligned_cols=149  Identities=22%  Similarity=0.330  Sum_probs=126.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCC-----------CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ-----------PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVF   69 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-----------~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h   69 (159)
                      |+++++|.+++..++||||+++|+|.+.+...+.           .....+++.+++.++.|++.|+.|||   +.+++|
T Consensus        82 v~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH---~~~ivH  158 (299)
T d1fgka_          82 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIH  158 (299)
T ss_dssp             CCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCC
T ss_pred             EecccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhh---hCCEEe
Confidence            6899999999999999999999999999875431           12256899999999999999999999   899999


Q ss_pred             ecCCCCCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccc
Q 031436           70 RNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAW  147 (159)
Q Consensus        70 ~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p  147 (159)
                      |||||+|||++.++.+|++|||++........ .......+++.|+|||.+.+..++.++|+||||+++ |+|++ |++|
T Consensus       159 rDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl-~ell~~g~~p  237 (299)
T d1fgka_         159 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL-WEIFTLGGSP  237 (299)
T ss_dssp             SCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTSCCS
T ss_pred             eeecccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHH-HHhccCCCCC
Confidence            99999999999999999999999876643322 122334578889999999999999999999999999 99997 7999


Q ss_pred             cccCCC
Q 031436          148 YRSEDW  153 (159)
Q Consensus       148 ~~~~~~  153 (159)
                      |.+.+.
T Consensus       238 ~~~~~~  243 (299)
T d1fgka_         238 YPGVPV  243 (299)
T ss_dssp             STTCCH
T ss_pred             CCCCCH
Confidence            987654

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-35  Score=207.60  Aligned_cols=144  Identities=27%  Similarity=0.319  Sum_probs=115.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++|+|.+ ++.++||||+++|+|.+.+.....   ..+++.+++.++.|++.|+.|||   +++++||||||+||+++
T Consensus        75 v~~~g~~~~-~~~~lv~Ey~~~g~l~~~~~~~~~---~~l~~~~~~~i~~~i~~gl~~LH---~~~ivH~DlKp~NIll~  147 (285)
T d1fmka3          75 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVG  147 (285)
T ss_dssp             CCEEEEECS-SSCEEEECCCTTCBHHHHHSHHHH---TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEC
T ss_pred             eEEEEEEec-CCeEEEEEecCCCchhhhhhhccc---ccchHHHHHHHHHHHHHHHHHHh---hhheecccccceEEEEC
Confidence            689999854 678999999999999988764321   45899999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceec-ccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTG-RAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g-~~p~~~~~  152 (159)
                      .+..+||+|||+++..............++..|+|||.+....++.++||||||+++ |||++| ++|+.+..
T Consensus       148 ~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil-~el~t~~~p~~~~~~  219 (285)
T d1fmka3         148 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL-TELTTKGRVPYPGMV  219 (285)
T ss_dssp             GGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTTCCSSTTCC
T ss_pred             CCCcEEEcccchhhhccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHH-HHHHhCCCCCCCCCC
Confidence            999999999999876543332223334578899999999999999999999999999 999985 55555543

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-35  Score=207.42  Aligned_cols=145  Identities=22%  Similarity=0.353  Sum_probs=121.8

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++|+|.+ +..++++|++.+|+|.+.+....    ..+++..+..++.|++.|+.|||   +++++||||||+||+++
T Consensus        74 v~l~g~~~~-~~~~~v~e~~~~~~l~~~~~~~~----~~~~~~~~~~i~~qi~~gl~yLH---~~~iiHrDlKp~NIll~  145 (317)
T d1xkka_          74 CRLLGICLT-STVQLITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVK  145 (317)
T ss_dssp             CCEEEEEES-SSEEEEEECCTTCBHHHHHHHTS----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEE
T ss_pred             eeEEEEEec-CCeeEEEEeccCCcccccccccc----cCCCHHHHHHHHHHHHHHHHHHH---HcCcccCcchhhcceeC
Confidence            689999986 56778899999999999876543    56889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCccee-eeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCCc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRI-RGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDWK  154 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~~  154 (159)
                      .+..+|++|||++.......... .....++..|+|||.+.+..++.++||||||+++ |||++ |+.||.+.+.+
T Consensus       146 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil-~el~t~g~~p~~~~~~~  220 (317)
T d1xkka_         146 TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV-WELMTFGSKPYDGIPAS  220 (317)
T ss_dssp             ETTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTSCCTTTTSCGG
T ss_pred             CCCCeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHH-HHHHHCCCCCCCCCCHH
Confidence            99999999999988765433221 2234578899999999999999999999999999 99998 89999886544

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-35  Score=203.50  Aligned_cols=145  Identities=21%  Similarity=0.369  Sum_probs=121.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++|+|.+ +..++||||+++|++.+.+....    ..+++..++.++.|++.|+.|||   +++++||||||+||+++
T Consensus        74 v~~~g~~~~-~~~~lv~e~~~~~~l~~~~~~~~----~~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDikp~NIll~  145 (273)
T d1u46a_          74 IRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLA  145 (273)
T ss_dssp             CCEEEEECS-SSCEEEEECCTTCBHHHHHHHHG----GGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEE
T ss_pred             EEEEEEEee-cchheeeeeecCcchhhhhhccc----CCCCHHHHHHHHHHHHHHHHHhh---hCCEeeeeecHHHhccc
Confidence            688999975 57899999999999998776532    46889999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcce--eeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCCc
Q 031436           81 EQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDWK  154 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~~  154 (159)
                      .+..+|++|||++.........  ......++..|+|||.+.+..++.++|+||||+++ |||++ |+.||.+.+.+
T Consensus       146 ~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil-~emlt~G~~Pf~~~~~~  221 (273)
T d1u46a_         146 TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL-WEMFTYGQEPWIGLNGS  221 (273)
T ss_dssp             ETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHH-HHHHTTSCCTTTTCCHH
T ss_pred             cccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHH-HHHHhCCCCCCCCcCHH
Confidence            9999999999998876544322  22334567789999999999999999999999999 99997 89999876544

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-34  Score=203.11  Aligned_cols=142  Identities=23%  Similarity=0.326  Sum_probs=118.4

Q ss_pred             CeEEEEEec-----CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC
Q 031436            1 MRLIGCCLE-----TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS   75 (159)
Q Consensus         1 v~l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~   75 (159)
                      |+++++|..     ....++++|++.++++........    ..+++..+..++.|++.|++|||   +++++||||||+
T Consensus        73 v~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~----~~~~~~~~~~~~~qi~~aL~yLH---~~~ivHrDiKp~  145 (305)
T d1blxa_          73 VRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPE----PGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQ  145 (305)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCT----TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGG
T ss_pred             ceeeeeecccccccCceEEEEEEeccCCchhhhhhccC----CCCCHHHHHHHHHHHHHHHHHHH---hCCEEecCCCcc
Confidence            578888853     346789999998766654443322    56888999999999999999999   899999999999


Q ss_pred             CEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           76 NILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        76 nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      |||++.++.+|++|||++.......  ......||+.|+|||.+.+.+++.++|+||+||++ |+|++|+.||.+.+
T Consensus       146 NILi~~~~~~kl~dfg~~~~~~~~~--~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il-~ell~g~~pf~~~~  219 (305)
T d1blxa_         146 NILVTSSGQIKLADFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIF-AEMFRRKPLFRGSS  219 (305)
T ss_dssp             GEEECTTCCEEECSCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHH-HHHHHSSCSCCCSS
T ss_pred             EEEEcCCCCeeecchhhhhhhcccc--cCCCcccChhhcCcchhcCCCCChhehhhchHHHH-HHHHHCCCCCCCCC
Confidence            9999999999999999877553322  22345789999999999999999999999999999 99999999998764

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-35  Score=202.77  Aligned_cols=144  Identities=24%  Similarity=0.351  Sum_probs=116.6

Q ss_pred             CeEEEEEec-CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe
Q 031436            1 MRLIGCCLE-TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~   79 (159)
                      |+++|+|.+ .+.+++||||+++|+|.+++...+.   ..+++..+..++.|++.|+.|||   +++++||||+|+||++
T Consensus        63 v~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~---~~l~~~~~~~i~~~i~~al~ylH---~~~ivH~dlkp~Nil~  136 (262)
T d1byga_          63 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLV  136 (262)
T ss_dssp             CCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred             eeEEEEEEecCCcEEEEEeccCCCCHHHHHHhcCC---CCCCHHHHHHHHHHHHhhccccc---cCceeccccchHhhee
Confidence            678999965 4568999999999999999864321   35788999999999999999999   8999999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cccccccCCCcc
Q 031436           80 QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GRAWYRSEDWKP  155 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~~p~~~~~~~~  155 (159)
                      +.++.+|++|||+++......    ....++..|+|||.+.+..++.++||||||+++ |||++ |+.||...+.++
T Consensus       137 ~~~~~~kl~dfg~s~~~~~~~----~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il-~el~t~~~~p~~~~~~~~  208 (262)
T d1byga_         137 SEDNVAKVSDFGLTKEASSTQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILL-WEIYSFGRVPYPRIPLKD  208 (262)
T ss_dssp             CTTSCEEECCCCC----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTSCCSCTTSCGGG
T ss_pred             cCCCCEeecccccceecCCCC----ccccccccCCChHHHhCCCCChHHHHHhHHHHH-HHHHHCCCCCCCCCCHHH
Confidence            999999999999987653322    223567889999999999999999999999999 99998 799998876543

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=4.2e-34  Score=202.33  Aligned_cols=145  Identities=21%  Similarity=0.255  Sum_probs=117.7

Q ss_pred             CeEEEEEecCC----CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhc-----CCCCeEEec
Q 031436            1 MRLIGCCLETE----NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVA-----FSRPIVFRN   71 (159)
Q Consensus         1 v~l~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-----~~~~~~h~~   71 (159)
                      |+++|+|.+.+    .+++||||+++|+|.+.+..      ..+++.....++.|++.|+.|+|+.     .+++++|||
T Consensus        60 v~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~------~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrD  133 (303)
T d1vjya_          60 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRD  133 (303)
T ss_dssp             CCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSC
T ss_pred             cceEEEEEeCCCcceEEEEEEecccCCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccc
Confidence            67899998654    47899999999999999975      3578888899999999999999931     025899999


Q ss_pred             CCCCCEEecCCCceEEEecCCCcccCCCcce---eeeeecccccccCccccccCC------CCCCcceEeccccccCcce
Q 031436           72 VKPSNILFQEQSVAKLFDFSYSESIPEGETR---IRGRVMGTFGYLPPEYIATGD------CNEKCDVYSFDGSRDSGHL  142 (159)
Q Consensus        72 l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~------~~~~~DvwS~g~~~~~~~~  142 (159)
                      |||.||+++.++.+|++|||++.........   ......|++.|+|||++.+..      ++.++|||||||++ |||+
T Consensus       134 lKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl-~el~  212 (303)
T d1vjya_         134 LKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF-WEIA  212 (303)
T ss_dssp             CCGGGEEECTTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHH-HHHH
T ss_pred             cCccceEEcCCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHH-HHHh
Confidence            9999999999999999999998766443321   123456899999999987643      56789999999999 9999


Q ss_pred             ecccccccCC
Q 031436          143 TGRAWYRSED  152 (159)
Q Consensus       143 ~g~~p~~~~~  152 (159)
                      +|..||....
T Consensus       213 tg~~~~~~~~  222 (303)
T d1vjya_         213 RRCSIGGIHE  222 (303)
T ss_dssp             HTBCBTTBCC
T ss_pred             hCCCCCCccc
Confidence            9998886543

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=2.5e-34  Score=200.86  Aligned_cols=139  Identities=22%  Similarity=0.260  Sum_probs=118.6

Q ss_pred             CeEEEEEecCCCceEEEEecCC-CChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe
Q 031436            1 MRLIGCCLETENPVLVFEYVEY-GTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~   79 (159)
                      |++++++.+++..++||||+.+ +++.+.+...     ..+++.++..++.|++.|+.|||   +++++||||||+||++
T Consensus        72 v~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~~~-----~~l~e~~~~~~~~qi~~al~~lH---~~~iiHrDiKp~NIll  143 (273)
T d1xwsa_          72 IRLLDWFERPDSFVLILERPEPVQDLFDFITER-----GALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILI  143 (273)
T ss_dssp             CCEEEEEECSSEEEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred             cEEEEEEeeCCeEEEEEEeccCcchHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCccccCcccceEE
Confidence            6889999999999999999975 5777777653     46889999999999999999999   8999999999999999


Q ss_pred             cCC-CceEEEecCCCcccCCCcceeeeeecccccccCccccccCCC-CCCcceEeccccccCcceecccccccC
Q 031436           80 QEQ-SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC-NEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        80 ~~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~-~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      +.+ ..+|++|||++.......   .....||+.|+|||.+.+..+ +.++|+||+||++ |+|++|+.||.+.
T Consensus       144 ~~~~~~vkl~DFG~a~~~~~~~---~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvil-yell~g~~Pf~~~  213 (273)
T d1xwsa_         144 DLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL-YDMVCGDIPFEHD  213 (273)
T ss_dssp             ETTTTEEEECCCTTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHH-HHHHHSSCSCCSH
T ss_pred             ecCCCeEEECccccceeccccc---ccccccCCCcCCHHHHcCCCCCCcccccccceeee-hhHhhCCCCCCCc
Confidence            854 689999999987553322   234568999999999987765 5779999999999 9999999999764

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=6.5e-34  Score=201.87  Aligned_cols=147  Identities=22%  Similarity=0.286  Sum_probs=122.7

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCC-----------CCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEE
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----------QPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVF   69 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h   69 (159)
                      |+++|+|.+++.+++||||+++|+|.+.+....           ......+++..+..++.|++.|+.|+|   +++++|
T Consensus        74 v~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH---~~~iiH  150 (309)
T d1fvra_          74 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIH  150 (309)
T ss_dssp             CCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEEC
T ss_pred             eeEEEEEecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhh---cCCccc
Confidence            689999999999999999999999999986531           112256889999999999999999999   899999


Q ss_pred             ecCCCCCEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecc-ccc
Q 031436           70 RNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGR-AWY  148 (159)
Q Consensus        70 ~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~-~p~  148 (159)
                      |||||.|||++.+..+|++|||++........  .....++..|+|||.+.+..++.++||||||+++ |||++|. +||
T Consensus       151 rDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil-~ell~~~~~p~  227 (309)
T d1fvra_         151 RDLAARNILVGENYVAKIADFGLSRGQEVYVK--KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL-WEIVSLGGTPY  227 (309)
T ss_dssp             SCCSGGGEEECGGGCEEECCTTCEESSCEECC--C----CCTTTCCHHHHHHCEECHHHHHHHHHHHH-HHHHTTSCCTT
T ss_pred             cccccceEEEcCCCceEEcccccccccccccc--ccceecCCcccchHHhccCCCCccceeehhHHHH-HHHHhcCCCCC
Confidence            99999999999999999999999865432211  1234578899999999999999999999999999 9999964 678


Q ss_pred             ccCCC
Q 031436          149 RSEDW  153 (159)
Q Consensus       149 ~~~~~  153 (159)
                      .+.+.
T Consensus       228 ~~~~~  232 (309)
T d1fvra_         228 CGMTC  232 (309)
T ss_dssp             TTCCH
T ss_pred             CCCCH
Confidence            76543

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.98  E-value=4.4e-34  Score=202.11  Aligned_cols=148  Identities=28%  Similarity=0.459  Sum_probs=122.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCC-------------------CCCCccchhhHHHHHHHHHHHHHHhhh
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ-------------------PNFEPVTCSLRLKIAMEIAYGIAYLHV   61 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------------~~~~~~~~~~~~~~~~~i~~~l~~lh~   61 (159)
                      |+++++|.+.+..++++||+++|+|.+++.....                   .....+++..+..++.|++.|+.|+| 
T Consensus        79 v~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH-  157 (301)
T d1lufa_          79 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS-  157 (301)
T ss_dssp             CCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH-
T ss_pred             ccceeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcc-
Confidence            5789999999999999999999999998864221                   11245788889999999999999999 


Q ss_pred             cCCCCeEEecCCCCCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCc
Q 031436           62 AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSG  140 (159)
Q Consensus        62 ~~~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~  140 (159)
                        +.+++||||||+||+++.+..+||+|||+++....... .......+++.|+|||.+.+..++.++||||||+++ ||
T Consensus       158 --~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl-~e  234 (301)
T d1lufa_         158 --ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVL-WE  234 (301)
T ss_dssp             --HTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHH-HH
T ss_pred             --cCCeEeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhH-HH
Confidence              89999999999999999999999999999876543222 222344577889999999999999999999999999 99


Q ss_pred             ceecc-cccccCC
Q 031436          141 HLTGR-AWYRSED  152 (159)
Q Consensus       141 ~~~g~-~p~~~~~  152 (159)
                      |++|. +||.+.+
T Consensus       235 ll~~~~~p~~~~~  247 (301)
T d1lufa_         235 IFSYGLQPYYGMA  247 (301)
T ss_dssp             HHTTTCCTTTTSC
T ss_pred             HHccCCCCCCCCC
Confidence            99885 6787654

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-33  Score=200.92  Aligned_cols=149  Identities=21%  Similarity=0.357  Sum_probs=126.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCC-------------CCCCccchhhHHHHHHHHHHHHHHhhhcCCCCe
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ-------------PNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI   67 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~   67 (159)
                      |+++|+|.+++..+++||||++|+|.+++.....             .....+++..+..++.|++.|+.|||   ++++
T Consensus        90 v~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH---~~~i  166 (311)
T d1t46a_          90 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNC  166 (311)
T ss_dssp             CCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTC
T ss_pred             EEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCe
Confidence            6899999999999999999999999998875431             12245788899999999999999999   8999


Q ss_pred             EEecCCCCCEEecCCCceEEEecCCCcccCCCcc-eeeeeecccccccCccccccCCCCCCcceEeccccccCccee-cc
Q 031436           68 VFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLT-GR  145 (159)
Q Consensus        68 ~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~-g~  145 (159)
                      +||||||+||+++.+..++++|||.++....... .......+++.|+|||.+.+..++.++||||||+++ |+|++ |.
T Consensus       167 vHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l-~ellt~g~  245 (311)
T d1t46a_         167 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFL-WELFSLGS  245 (311)
T ss_dssp             CCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTTC
T ss_pred             eecccccccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHH-HHHHhCCC
Confidence            9999999999999999999999999887654332 223345678999999999999999999999999999 99998 67


Q ss_pred             cccccCCC
Q 031436          146 AWYRSEDW  153 (159)
Q Consensus       146 ~p~~~~~~  153 (159)
                      +||.+.+.
T Consensus       246 p~~~~~~~  253 (311)
T d1t46a_         246 SPYPGMPV  253 (311)
T ss_dssp             CSSTTCCS
T ss_pred             CCCCCCCH
Confidence            77877654

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.97  E-value=4.2e-33  Score=196.36  Aligned_cols=145  Identities=17%  Similarity=0.179  Sum_probs=122.3

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      +.+++++.+++..++||||+ +++|.+.+....    ..++......++.|++.|+.|+|   +++++||||||+||+++
T Consensus        64 ~~~~~~~~~~~~~~~vme~~-~~~l~~~~~~~~----~~~~~~~~~~i~~q~~~~l~~lH---~~giiHrDiKp~Nili~  135 (293)
T d1csna_          64 PNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCG----RKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIG  135 (293)
T ss_dssp             CCEEEEEEETTEEEEEEECC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEEC
T ss_pred             CEEEEEeecCCccEEEEEec-CCCHHHHHHhhc----cchhhHHHHHHHHHHHHHHHHHH---HCCceeccCCccceeec
Confidence            35788888899999999999 689999886543    45888899999999999999999   99999999999999997


Q ss_pred             C-----CCceEEEecCCCcccCCCcc------eeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccc
Q 031436           81 E-----QSVAKLFDFSYSESIPEGET------RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYR  149 (159)
Q Consensus        81 ~-----~~~~~l~d~~~~~~~~~~~~------~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~  149 (159)
                      .     ...++++|||++........      .......||+.|+|||.+.+..++.++|+||||+++ |+|++|+.||.
T Consensus       136 ~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l-~elltg~~Pf~  214 (293)
T d1csna_         136 RPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVF-MYFLRGSLPWQ  214 (293)
T ss_dssp             CSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHH-HHHHHSSCTTS
T ss_pred             CcccccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHH-HHHHhCCCcCC
Confidence            4     45799999999876543211      112345689999999999999999999999999999 99999999998


Q ss_pred             cCCCc
Q 031436          150 SEDWK  154 (159)
Q Consensus       150 ~~~~~  154 (159)
                      +.+..
T Consensus       215 ~~~~~  219 (293)
T d1csna_         215 GLKAA  219 (293)
T ss_dssp             SCCSC
T ss_pred             Cccch
Confidence            76543

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=8.2e-34  Score=200.46  Aligned_cols=143  Identities=20%  Similarity=0.326  Sum_probs=119.9

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++||||+.+ ++.+.+.....   ..+++..+..++.|++.|++|||   +++++||||||+||+++
T Consensus        64 v~~~~~~~~~~~~~iv~e~~~~-~~~~~~~~~~~---~~l~e~~~~~~~~qil~~L~yLH---~~~IiHrDiKpeNIl~~  136 (298)
T d1gz8a_          64 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASAL---TGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLIN  136 (298)
T ss_dssp             CCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEC
T ss_pred             EEeccccccccceeEEEeecCC-chhhhhhhhcc---cCCCHHHHHHHHHHHHHHHHHhh---cCCEEccccCchheeec
Confidence            6899999999999999999965 55555443221   56899999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCC-CCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD-CNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .+..+|++|||.+......... .....+++.|+|||.+.... ++.++|+||+||++ |+|++|+.||.+.+
T Consensus       137 ~~~~~kl~DFG~a~~~~~~~~~-~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvil-y~m~~G~~Pf~~~~  207 (298)
T d1gz8a_         137 TEGAIKLADFGLARAFGVPVRT-YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIF-AEMVTRRALFPGDS  207 (298)
T ss_dssp             TTSCEEECSTTHHHHHCCCSBC-TTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHH-HHHHHSSCSCCCSS
T ss_pred             ccCcceeccCCcceeccCCccc-ceeecccceeeehhhhccccCCCccccccccchhh-hHHhhCCCCCCCCC
Confidence            9999999999998766443322 22346889999999987665 57899999999999 99999999997654

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.7e-33  Score=200.64  Aligned_cols=146  Identities=23%  Similarity=0.299  Sum_probs=124.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+....++++||+.+|+|.+.+...     ..+++..+..++.|++.|+.|+|   +++++||||||+||+++
T Consensus        92 v~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~-----~~~~e~~~~~~~~Qi~~al~~lH---~~~ivHrDiKp~Nill~  163 (322)
T d1vzoa_          92 VTLHYAFQTETKLHLILDYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLD  163 (322)
T ss_dssp             CCEEEEEEETTEEEEEECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEC
T ss_pred             EEeeeeeccCCceeeeeecccccHHHHHHHhc-----ccccHHHHHHHHHHHHHHHHHhh---cCCEEeccCCccceeec
Confidence            57889999999999999999999999998765     35678888899999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC--CCCCCcceEeccccccCcceecccccccCCCcc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG--DCNEKCDVYSFDGSRDSGHLTGRAWYRSEDWKP  155 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~--~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~~~  155 (159)
                      .++.+|++|||++...............+++.|++||.+.+.  .++.++||||+||++ |+|++|+.||.+.+...
T Consensus       164 ~~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iL-yelltG~~PF~~~~~~~  239 (322)
T d1vzoa_         164 SNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLM-YELLTGASPFTVDGEKN  239 (322)
T ss_dssp             TTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHH-HHHHHSSCTTSCTTSCC
T ss_pred             CCCCEEEeeccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHH-HHHHhCCCCCCCCCHHH
Confidence            999999999999876654433333445688899999999765  367899999999999 99999999998876543

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.1e-33  Score=197.81  Aligned_cols=143  Identities=22%  Similarity=0.346  Sum_probs=119.3

Q ss_pred             CeEEEEEec-CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEe
Q 031436            1 MRLIGCCLE-TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF   79 (159)
Q Consensus         1 v~l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~   79 (159)
                      |+++|+|.+ ++..++|||||++|+|.+++....    ...+...+..++.|++.|+.|+|   +.+++||||||.|||+
T Consensus        91 v~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~~----~~~~~~~~~~i~~qia~gL~~lH---~~~iiHrDLK~~NILl  163 (311)
T d1r0pa_          91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCML  163 (311)
T ss_dssp             CCCCEEEEETTTEEEEEEECCTTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred             eEEeEEEEecCCceEEEEEEeecCchhhhhcccc----ccchHHHHHHHHHHHHHhhhhhc---ccCcccCCccHHhEeE
Confidence            578898875 467899999999999999887543    45677788899999999999999   8999999999999999


Q ss_pred             cCCCceEEEecCCCcccCCCcce---eeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           80 QEQSVAKLFDFSYSESIPEGETR---IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        80 ~~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      +.+..+||+|||+++........   ......++..|+|||.+....++.++||||||+++ ||+++|..||...
T Consensus       164 ~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl-~El~t~~~p~~~~  237 (311)
T d1r0pa_         164 DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL-WELMTRGAPPYPD  237 (311)
T ss_dssp             CTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTSCCSCC-
T ss_pred             CCCCCEEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHH-HHHHHCCCCCCCC
Confidence            99999999999998765433211   11223578889999999999999999999999999 9999977776543

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=2.1e-32  Score=193.17  Aligned_cols=143  Identities=20%  Similarity=0.240  Sum_probs=116.3

Q ss_pred             EEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec--
Q 031436            3 LIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ--   80 (159)
Q Consensus         3 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~--   80 (159)
                      +.+++.+++..++||||+ ++++.+.+....    ..+++..+..++.|++.|++|||   +++++||||||+||++.  
T Consensus        68 ~~~~~~~~~~~~ivme~~-~~~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~iiHrDiKp~NIl~~~~  139 (299)
T d1ckia_          68 IRWCGAEGDYNVMVMELL-GPSLEDLFNFCS----RKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLG  139 (299)
T ss_dssp             EEEEEEETTEEEEEEECC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCG
T ss_pred             EEEEEecCCEEEEEEEEc-CCchhhhhhhcc----CCCcHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHhhcccccc
Confidence            445556777888999999 568877665432    56889999999999999999999   89999999999999875  


Q ss_pred             -CCCceEEEecCCCcccCCCcc------eeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCCC
Q 031436           81 -EQSVAKLFDFSYSESIPEGET------RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW  153 (159)
Q Consensus        81 -~~~~~~l~d~~~~~~~~~~~~------~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~~  153 (159)
                       .+..++++|||++........      .......||+.|+|||.+.+..++.++|+||||+++ |+|++|+.||.....
T Consensus       140 ~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l-~el~tg~~P~~~~~~  218 (299)
T d1ckia_         140 KKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVL-MYFNLGSLPWQGLKA  218 (299)
T ss_dssp             GGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHH-HHHHHSSCTTCCCC-
T ss_pred             CCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHH-HHHHhCCCcccccch
Confidence             345799999999876543221      122345689999999999999999999999999999 999999999987654


Q ss_pred             c
Q 031436          154 K  154 (159)
Q Consensus       154 ~  154 (159)
                      .
T Consensus       219 ~  219 (299)
T d1ckia_         219 A  219 (299)
T ss_dssp             -
T ss_pred             H
Confidence            3

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-32  Score=195.43  Aligned_cols=149  Identities=25%  Similarity=0.351  Sum_probs=124.0

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCC-----CCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS   75 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~   75 (159)
                      |+++|+|......++||||+++|+|.+++...+     ......+++..+..++.|++.|+.|||   +++++||||||.
T Consensus        86 v~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH---~~~ivHrDlk~~  162 (308)
T d1p4oa_          86 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAAR  162 (308)
T ss_dssp             CCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGG
T ss_pred             eeeeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeeceEcCC
Confidence            689999999999999999999999999875321     111134677888999999999999999   899999999999


Q ss_pred             CEEecCCCceEEEecCCCcccCCCcce-eeeeecccccccCccccccCCCCCCcceEeccccccCcceec-ccccccCCC
Q 031436           76 NILFQEQSVAKLFDFSYSESIPEGETR-IRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTG-RAWYRSEDW  153 (159)
Q Consensus        76 nil~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g-~~p~~~~~~  153 (159)
                      |||++.+..+||+|||+++........ ......+++.|+|||.+.+..++.++|+||||+++ |||++| .+||.+.+.
T Consensus       163 NiLld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il-~El~t~~~~p~~~~~~  241 (308)
T d1p4oa_         163 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL-WEIATLAEQPYQGLSN  241 (308)
T ss_dssp             GEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHH-HHHHHTSCCTTTTSCH
T ss_pred             ceeecCCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHH-HHHHhCCCCCCCCCCH
Confidence            999999999999999998765433221 12333578899999999999999999999999999 999998 588877653

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.97  E-value=2.5e-32  Score=191.70  Aligned_cols=142  Identities=18%  Similarity=0.278  Sum_probs=116.5

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |++++++.+++..++++|++.++.+.......     ..+++..+..++.|++.|++|||   +.+++||||||+||+++
T Consensus        63 v~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH---~~~IvHrDiKp~NIll~  134 (286)
T d1ob3a_          63 VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCE-----GGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLIN  134 (286)
T ss_dssp             CCEEEEEECSSCEEEEEECCSEEHHHHHHTST-----TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEC
T ss_pred             EeeeeecccCCceeEEEEeehhhhHHHHHhhc-----CCcchhhhHHHHHHHHHHHHHhc---cCcEEecCCCCceeeEc
Confidence            68899999999999999999765554444322     56899999999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCC
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .++.+|++|||.+......... .....+++.|+|||.+.+. .++.++|+||+|+++ ++|++|+.||.+.+
T Consensus       135 ~~~~~kl~DfG~a~~~~~~~~~-~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l-~el~~G~~pf~~~~  205 (286)
T d1ob3a_         135 REGELKIADFGLARAFGIPVRK-YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIF-AEMVNGTPLFPGVS  205 (286)
T ss_dssp             TTSCEEECCTTHHHHHCC----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHH-HHHHHSSCSCCCSS
T ss_pred             CCCCEEecccccceecccCccc-cceecccchhhhHHHHhCCCCCCcceeehhcCcHH-HHHHHCCCCCCCCC
Confidence            9999999999998765443222 2234578889999998765 468999999999999 99999999997654

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-31  Score=193.00  Aligned_cols=142  Identities=17%  Similarity=0.256  Sum_probs=115.3

Q ss_pred             CeEEEEEecCC----CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCC
Q 031436            1 MRLIGCCLETE----NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSN   76 (159)
Q Consensus         1 v~l~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~n   76 (159)
                      |++++++....    ..+++++++.+|+|.+.+..      ..+++..+..++.|++.|++|||   +++++||||||+|
T Consensus        69 v~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~l~~------~~l~~~~i~~i~~qil~al~yLH---~~~iiHRDIKp~N  139 (345)
T d1pmea_          69 IGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT------QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSN  139 (345)
T ss_dssp             CCCCEEECCSSTTTCCCEEEEEECCCEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGG
T ss_pred             CcEEEEEeeccccccceEEEEEeecCCchhhhhhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCcce
Confidence            46777776543    23455566668999999864      35889999999999999999999   8999999999999


Q ss_pred             EEecCCCceEEEecCCCcccCCCcce--eeeeecccccccCccccc-cCCCCCCcceEeccccccCcceecccccccCC
Q 031436           77 ILFQEQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEYIA-TGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        77 il~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~-~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ||++.++.+|++|||++.........  ......+++.|+|||.+. ...++.++|+||+||++ |+|++|+.||.+.+
T Consensus       140 ILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il-~eml~g~~pf~~~~  217 (345)
T d1pmea_         140 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL-AEMLSNRPIFPGKH  217 (345)
T ss_dssp             EEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHH-HHHHHSSCSCCCSS
T ss_pred             EEECCCCCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCcee-hHHhhCCCCCCCCC
Confidence            99999999999999998765432211  123446788999999984 45678999999999999 99999999998765

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.7e-31  Score=192.33  Aligned_cols=144  Identities=24%  Similarity=0.306  Sum_probs=113.4

Q ss_pred             CeEEEEEecC------CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCLET------ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~~------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      |+++++|...      ..+++|||||+++ +.+.+..... ....+++.++..++.|++.||+|||   +++++||||||
T Consensus        76 v~~~~~~~~~~~~~~~~~~~lv~Ey~~~~-~~~~l~~~~~-~~~~l~~~~~~~i~~qil~aL~yLH---~~~IiHrDiKp  150 (350)
T d1q5ka_          76 VRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKP  150 (350)
T ss_dssp             CCEEEEEEEC--CCSCCEEEEEEECCSEE-HHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCG
T ss_pred             CcEEEEEEecCccCCceEEEEEEeccCCc-cHHHHHhhhh-ccCCCCHHHHHHHHHHHHHHHHHHH---hcCCcccCCCc
Confidence            5677887542      2468999999754 4443322110 1156899999999999999999999   99999999999


Q ss_pred             CCEEecCCC-ceEEEecCCCcccCCCcceeeeeecccccccCcccccc-CCCCCCcceEeccccccCcceecccccccCC
Q 031436           75 SNILFQEQS-VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        75 ~nil~~~~~-~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +|||++.+. .+||+|||++.........  ....++..|+|||.+.+ ..++.++|+||+||++ |+|++|+.||...+
T Consensus       151 ~NILl~~~~~~~kl~DFG~a~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il-~el~~g~~pf~~~~  227 (350)
T d1q5ka_         151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVL-AELLLGQPIFPGDS  227 (350)
T ss_dssp             GGEEECTTTCCEEECCCTTCEECCTTSCC--CSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHH-HHHHHTSCSSCCSS
T ss_pred             ceEEEecCCCceeEecccchhhccCCccc--ccccccccccChHHhhcccCCCcceeecccceEE-EehhhCCCCCCCCC
Confidence            999998764 8999999998766443322  23468899999998875 4689999999999999 99999999997654

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.2e-31  Score=192.69  Aligned_cols=137  Identities=21%  Similarity=0.343  Sum_probs=117.3

Q ss_pred             CeEEEEEecCC------CceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCLETE------NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~~~------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      |+++++|...+      .++++|||+ +.+|.+..+.      ..+++..+..++.|++.||.|||   +++++||||||
T Consensus        80 v~l~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~------~~l~~~~~~~~~~qi~~aL~~LH---~~~IiHrDiKp  149 (346)
T d1cm8a_          80 IGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKH------EKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKP  149 (346)
T ss_dssp             CCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             eEEEEEeccCccccccceEEEEEecc-cccHHHHHHh------ccccHHHHHHHHHHHHHHHHHHH---hCCCcccccCc
Confidence            57788887654      569999999 5678777654      45899999999999999999999   89999999999


Q ss_pred             CCEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccC-CCCCCcceEeccccccCcceecccccccCC
Q 031436           75 SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        75 ~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      +||+++.+..+|++|||.+.......    ....+++.|+|||.+.+. .++.++|+||+||++ |+|++|+.||.+.+
T Consensus       150 ~NIL~~~~~~~kl~Dfg~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil-~ell~g~~pf~~~~  223 (346)
T d1cm8a_         150 GNLAVNEDCELKILDFGLARQADSEM----TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIM-AEMITGKTLFKGSD  223 (346)
T ss_dssp             GGEEECTTCCEEECCCTTCEECCSSC----CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             chhhcccccccccccccceeccCCcc----ccccccccccCHHHHcCCCCCCccchhhcchHHH-HHHHHCcCCCCCCC
Confidence            99999999999999999988764432    234678899999998764 568999999999999 99999999998764

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.2e-31  Score=189.36  Aligned_cols=143  Identities=21%  Similarity=0.300  Sum_probs=113.1

Q ss_pred             CeEEEEEec--------CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecC
Q 031436            1 MRLIGCCLE--------TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNV   72 (159)
Q Consensus         1 v~l~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l   72 (159)
                      +++++++..        .+..+++|||+.++.+. ......    ..+++..+..++.|++.|+.|||   +++++||||
T Consensus        72 i~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~-~~~~~~----~~~~~~~~~~i~~qil~~l~~lH---~~~ivHrDl  143 (318)
T d3blha1          72 VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG-LLSNVL----VKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDM  143 (318)
T ss_dssp             CCEEEEEEC----------CEEEEEECCCEEHHH-HHTCTT----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCC
T ss_pred             cceEeeeecccccccccCceEEEEEeccCCCccc-hhhhcc----cccccHHHHHHHHHHHHHHHHhc---cCCEEecCc
Confidence            456676644        34679999999765554 333322    56788889999999999999999   899999999


Q ss_pred             CCCCEEecCCCceEEEecCCCcccCCCcc---eeeeeecccccccCccccccC-CCCCCcceEeccccccCcceeccccc
Q 031436           73 KPSNILFQEQSVAKLFDFSYSESIPEGET---RIRGRVMGTFGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWY  148 (159)
Q Consensus        73 ~~~nil~~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~~ape~~~~~-~~~~~~DvwS~g~~~~~~~~~g~~p~  148 (159)
                      ||+||+++.+..+|++|||++........   .......+++.|+|||.+.+. .+++++|+||+||++ ++|++|+.||
T Consensus       144 Kp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil-~el~~g~~pf  222 (318)
T d3blha1         144 KAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM-AEMWTRSPIM  222 (318)
T ss_dssp             CGGGEEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHH-HHHHHSSCSC
T ss_pred             CchheeecCCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCcee-eeHhhCCCCC
Confidence            99999999999999999999876543221   112234578999999998765 689999999999999 9999999999


Q ss_pred             ccCC
Q 031436          149 RSED  152 (159)
Q Consensus       149 ~~~~  152 (159)
                      .+.+
T Consensus       223 ~~~~  226 (318)
T d3blha1         223 QGNT  226 (318)
T ss_dssp             CCSS
T ss_pred             CCCC
Confidence            8654

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.96  E-value=6e-31  Score=187.85  Aligned_cols=137  Identities=20%  Similarity=0.265  Sum_probs=114.7

Q ss_pred             CeEEEEEec--CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEE
Q 031436            1 MRLIGCCLE--TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNIL   78 (159)
Q Consensus         1 v~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil   78 (159)
                      |++++++..  ...+++|||||.+++|.+..        +.+++..+..++.|++.||.|||   +++++||||||+|||
T Consensus        93 v~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~--------~~l~e~~i~~i~~qil~aL~~LH---~~gIvHrDiKp~NIL  161 (328)
T d3bqca1          93 ITLADIVKDPVSRTPALVFEHVNNTDFKQLY--------QTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVM  161 (328)
T ss_dssp             CCEEEEEECTTTCSEEEEEECCCSCBGGGTT--------TSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEE
T ss_pred             cEEEEEEEecCCCceeEEEeecCCCcHHHHh--------cCCCHHHHHHHHHHHHHHHHHHh---hcccccccccccceE
Confidence            578888874  45688999999999987654        45889999999999999999999   899999999999999


Q ss_pred             ecCCC-ceEEEecCCCcccCCCcceeeeeecccccccCccccccCC-CCCCcceEeccccccCcceecccccccC
Q 031436           79 FQEQS-VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD-CNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        79 ~~~~~-~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      ++.+. .+|++|||++........  .....++..|+|||.+.+.. ++.++|+||+||++ +++++|+.||...
T Consensus       162 i~~~~~~vkl~DFG~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l-~e~~~g~~pf~~~  233 (328)
T d3bqca1         162 IDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML-ASMIFRKEPFFHG  233 (328)
T ss_dssp             EETTTTEEEECCGGGCEECCTTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHH-HHHHHTCSSSSCC
T ss_pred             EcCCCCeeeecccccceeccCCCc--ccccccCccccCcccccCCCCCCcccchhhhhhhh-HHhccCCCCCCCC
Confidence            98654 689999999876543322  22345788999999987654 79999999999999 9999999999654

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=7.9e-31  Score=189.09  Aligned_cols=138  Identities=22%  Similarity=0.294  Sum_probs=109.0

Q ss_pred             CeEEEEEec------CCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCC
Q 031436            1 MRLIGCCLE------TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP   74 (159)
Q Consensus         1 v~l~~~~~~------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~   74 (159)
                      |+++++|..      .+.+|+||||+.+ ++.+.+.       ..+++..+..++.|++.|+.|||   +++++||||||
T Consensus        79 v~~~~~f~~~~~~~~~~~~~iv~Ey~~~-~l~~~~~-------~~~~~~~i~~~~~qil~gl~~LH---~~giiHrDlKP  147 (355)
T d2b1pa1          79 ISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ-------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP  147 (355)
T ss_dssp             CCCSEEECSCCSTTTCCEEEEEEECCSE-EHHHHHT-------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             eEEEEEEecccccccCceeEEEEeccch-HHHHhhh-------cCCCHHHHHHHHHHHHHHHHHhh---hcccccccCCc
Confidence            467788853      3577999999965 5555552       35788999999999999999999   89999999999


Q ss_pred             CCEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccCC
Q 031436           75 SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        75 ~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      .||+++.+..++++|||.+........  .....+++.|+|||.+.+..+++++|+||+||++ ++|++|+.||.+.+
T Consensus       148 ~Nil~~~~~~~kl~df~~~~~~~~~~~--~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l-~ell~g~~pF~~~~  222 (355)
T d2b1pa1         148 SNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM-GEMVRHKILFPGRD  222 (355)
T ss_dssp             GGEEECTTCCEEECCCCC-----------------CCTTCCHHHHTTCCCCTTHHHHHHHHHH-HHHHHSSCSSCCSS
T ss_pred             cccccccccceeeechhhhhccccccc--cccccccccccChhhhcCCCCCCCcccccccchH-HHHhhCCCCCCCCC
Confidence            999999999999999998776544322  2334678899999999999999999999999999 99999999998765

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.4e-30  Score=180.01  Aligned_cols=138  Identities=17%  Similarity=0.221  Sum_probs=117.6

Q ss_pred             CeEEEEEecCCCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEec
Q 031436            1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQ   80 (159)
Q Consensus         1 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~   80 (159)
                      |+++++|.+....++++|++.++++...+...     +.+++..+..++.|++.|++|||   +++++||||||+||+++
T Consensus        64 v~~~~~~~~~~~~~iv~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~q~~~aL~~lH---~~~IvHrDiKP~NIli~  135 (292)
T d1unla_          64 VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN-----GDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLIN  135 (292)
T ss_dssp             CCEEEEEECSSEEEEEEECCSEEHHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEC
T ss_pred             EeeccccccccceeEEeeeccccccccccccc-----cccchhHHHHHHHHHHHHHHHhh---cCCEeeecccCcccccc
Confidence            57899999999999999999988887766543     46788899999999999999999   89999999999999999


Q ss_pred             CCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCC-CCCCcceEeccccccCcceeccccc
Q 031436           81 EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD-CNEKCDVYSFDGSRDSGHLTGRAWY  148 (159)
Q Consensus        81 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~DvwS~g~~~~~~~~~g~~p~  148 (159)
                      .+..+|++|||.+......... .....++..|+|||.+.... ++.++|+||+||++ ++|++|+.||
T Consensus       136 ~~~~~kl~DFG~a~~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il-~ell~g~~p~  202 (292)
T d1unla_         136 RNGELKLANFGLARAFGIPVRC-YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIF-AELANAGRPL  202 (292)
T ss_dssp             TTCCEEECCCTTCEECCSCCSC-CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHH-HHHTTTSCCS
T ss_pred             cCCceeeeecchhhcccCCCcc-ceeeccccchhhhhHhccCCCCCchhhccccchHH-HHHhhCCCCC
Confidence            9999999999998876543322 22234577899999987665 68999999999999 9999999875

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.7e-30  Score=184.98  Aligned_cols=138  Identities=23%  Similarity=0.325  Sum_probs=111.2

Q ss_pred             CeEEEEEecC-----CCceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC
Q 031436            1 MRLIGCCLET-----ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPS   75 (159)
Q Consensus         1 v~l~~~~~~~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~   75 (159)
                      |++++++...     ...++++|++.+|+|.+.+..      .++++..+..++.|++.||.|||   +++++||||||+
T Consensus        80 v~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~------~~l~e~~~~~i~~qil~aL~~LH---~~giiHrDiKp~  150 (348)
T d2gfsa1          80 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPS  150 (348)
T ss_dssp             CCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGG
T ss_pred             eeEEEEEeeccccccCceEEEEEeecCCchhhhccc------ccccHHHHHHHHHHHHHHHHHHH---hCCCcccccCCc
Confidence            4567777532     334666777889999998853      45899999999999999999999   899999999999


Q ss_pred             CEEecCCCceEEEecCCCcccCCCcceeeeeecccccccCccccccCC-CCCCcceEeccccccCcceecccccccCC
Q 031436           76 NILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD-CNEKCDVYSFDGSRDSGHLTGRAWYRSED  152 (159)
Q Consensus        76 nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~DvwS~g~~~~~~~~~g~~p~~~~~  152 (159)
                      ||+++.++.+|++|||.+.......    ....++..|+|||...+.. ++.++|+||+||++ |+|++|+.||.+.+
T Consensus       151 NILi~~~~~~kl~dfg~a~~~~~~~----~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l-~~ll~g~~pF~~~~  223 (348)
T d2gfsa1         151 NLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM-AELLTGRTLFPGTD  223 (348)
T ss_dssp             GEEECTTCCEEECCC----CCTGGG----SSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHH-HHHHHSSCSCCCSS
T ss_pred             cccccccccccccccchhcccCccc----ccccccccccCchhhcCCccCCcccchhhhhHHH-HHHHhCCCCCCCCC
Confidence            9999999999999999876553322    2345788899999877665 58999999999999 99999999998765

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=1.9e-25  Score=160.90  Aligned_cols=142  Identities=18%  Similarity=0.246  Sum_probs=105.7

Q ss_pred             CeEEEEEecC--CCceEEEEecCCCC-hHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCE
Q 031436            1 MRLIGCCLET--ENPVLVFEYVEYGT-LADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNI   77 (159)
Q Consensus         1 v~l~~~~~~~--~~~~lv~e~~~~g~-L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~ni   77 (159)
                      |++++++...  ...+.+++++..+. .........   ...+++..+..++.|++.|+.|||+  ..+++||||||+||
T Consensus        83 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~i~~qil~al~~lh~--~~~IvHrDlKp~NI  157 (362)
T d1q8ya_          83 LKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYE---HRGIPLIYVKQISKQLLLGLDYMHR--RCGIIHTDIKPENV  157 (362)
T ss_dssp             CCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHH--TTCEECSCCSGGGE
T ss_pred             EEEEEEeeeccccceeeeeeeccccccccccccccc---ccCCcHHHHHHHHHHHHHHHHHHhh--hcCcccccCChhHe
Confidence            3456666543  34556666665433 333332222   2567888999999999999999993  38899999999999


Q ss_pred             EecCCC------ceEEEecCCCcccCCCcceeeeeecccccccCccccccCCCCCCcceEeccccccCcceecccccccC
Q 031436           78 LFQEQS------VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSE  151 (159)
Q Consensus        78 l~~~~~------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~DvwS~g~~~~~~~~~g~~p~~~~  151 (159)
                      +++.++      .++++|||.+.......    ....+++.|+|||.+.+..++.++|+||+|+++ ++|++|+.||...
T Consensus       158 ll~~~~~~~~~~~~kl~dfg~s~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il-~el~~g~~pF~~~  232 (362)
T d1q8ya_         158 LMEIVDSPENLIQIKIADLGNACWYDEHY----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLI-FELITGDFLFEPD  232 (362)
T ss_dssp             EEEEEETTTTEEEEEECCCTTCEETTBCC----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHH-HHHHHSSCCC---
T ss_pred             eeeccCcccccceeeEeeccccccccccc----ccccccccccChhhccccCCCccccccchHHHH-HHHHHCCCCCCCC
Confidence            997543      38999999887654322    234688899999999999999999999999999 9999999999765


Q ss_pred             C
Q 031436          152 D  152 (159)
Q Consensus       152 ~  152 (159)
                      +
T Consensus       233 ~  233 (362)
T d1q8ya_         233 E  233 (362)
T ss_dssp             -
T ss_pred             c
Confidence            4

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.42  E-value=9.7e-14  Score=90.91  Aligned_cols=96  Identities=20%  Similarity=0.174  Sum_probs=67.9

Q ss_pred             ceEEEEecCCCChHHHhhCCCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCCEEecCCCceEEEecCC
Q 031436           13 PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY   92 (159)
Q Consensus        13 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~nil~~~~~~~~l~d~~~   92 (159)
                      .+++|||+.+..+.+            ++......++.|++.++.+||   +++++|||+||.||+++++ .++++|||.
T Consensus        85 ~~lvme~~~~~~~~~------------l~~~~~~~i~~ql~~~l~~lH---~~giiHrDiKP~NILv~~~-~~~liDFG~  148 (191)
T d1zara2          85 NAVLMELIDAKELYR------------VRVENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVSEE-GIWIIDFPQ  148 (191)
T ss_dssp             TEEEEECCCCEEGGG------------CCCSCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEETT-EEEECCCTT
T ss_pred             CEEEEEeeccccccc------------hhhHHHHHHHHHHHHHHHHHh---hCCEEEccCChhheeeeCC-CEEEEECCC
Confidence            479999998654422            233445678899999999999   8999999999999999865 488999998


Q ss_pred             CcccCCCcceeeeeecccccccCc--cc---cccCCCCCCcceEec
Q 031436           93 SESIPEGETRIRGRVMGTFGYLPP--EY---IATGDCNEKCDVYSF  133 (159)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~ap--e~---~~~~~~~~~~DvwS~  133 (159)
                      +.....+...         .+...  +.   .-...|+.++|+||.
T Consensus       149 a~~~~~~~~~---------~~l~rd~~~~~~~f~r~y~~~~d~~s~  185 (191)
T d1zara2         149 SVEVGEEGWR---------EILERDVRNIITYFSRTYRTEKDINSA  185 (191)
T ss_dssp             CEETTSTTHH---------HHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred             cccCCCCCcH---------HHHHHHHHHHHHHHcCCCCCcccHHHH
Confidence            8655332211         01100  00   113567899999996

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.46  E-value=0.00019  Score=47.66  Aligned_cols=29  Identities=21%  Similarity=0.321  Sum_probs=23.9

Q ss_pred             CeEEecCCCCCEEecCCCceEEEecCCCc
Q 031436           66 PIVFRNVKPSNILFQEQSVAKLFDFSYSE   94 (159)
Q Consensus        66 ~~~h~~l~~~nil~~~~~~~~l~d~~~~~   94 (159)
                      .++|+|+.+.|++++......++||+.+.
T Consensus       184 ~l~HgD~~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T d1j7la_         184 VFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             EEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             EEEEeeccCcceeecCCceEEEeechhcc
Confidence            47899999999999876656799997543

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=96.49  E-value=0.0011  Score=43.60  Aligned_cols=29  Identities=10%  Similarity=0.147  Sum_probs=24.2

Q ss_pred             CeEEecCCCCCEEecCCCceEEEecCCCc
Q 031436           66 PIVFRNVKPSNILFQEQSVAKLFDFSYSE   94 (159)
Q Consensus        66 ~~~h~~l~~~nil~~~~~~~~l~d~~~~~   94 (159)
                      .++|+|+.+.|++++.+..+.++||+.+.
T Consensus       176 ~liHgD~~~~Nvl~~~~~~~~iID~~~~~  204 (255)
T d1nd4a_         176 VVTHGDACLPNIMVENGRFSGFIDCGRLG  204 (255)
T ss_dssp             EEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             eEEeCCCCCcceEEeCCceEEEEEchhcc
Confidence            47999999999999877656789997654

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=93.75  E-value=0.0085  Score=40.58  Aligned_cols=31  Identities=16%  Similarity=0.421  Sum_probs=26.5

Q ss_pred             CCCeEEecCCCCCEEecCCCceEEEecCCCc
Q 031436           64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSE   94 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~   94 (159)
                      ..+++|+|+.+.|++++.+...-++||+.+.
T Consensus       182 ~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         182 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             ccccccCCcchhhhhcccccceeEecccccc
Confidence            4679999999999999988767899998653

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=84.90  E-value=0.22  Score=34.66  Aligned_cols=30  Identities=13%  Similarity=0.349  Sum_probs=24.8

Q ss_pred             CCCeEEecCCCCCEEecCCCceEEEecCCCc
Q 031436           64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSE   94 (159)
Q Consensus        64 ~~~~~h~~l~~~nil~~~~~~~~l~d~~~~~   94 (159)
                      ...++|+|+.+.||+++.+. ++++|+..+.
T Consensus       222 ~~~LiHGDl~~gNIlv~~~~-~~vID~E~a~  251 (392)
T d2pula1         222 AETLIHGDLHTGSIFASEHE-TKVIDPEFAF  251 (392)
T ss_dssp             CCEEECSCCCGGGEEECSSC-EEECCCTTCE
T ss_pred             CcceeccCCcCCceeEcCCc-eEEechhhcc
Confidence            45699999999999998764 8999997654