Citrus Sinensis ID: 031533


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------16
MDLRSLAGLDSPFFSILEDVLELPEEQEKTRNNPSRAYVRDAKAMAATPADVMEYPNSYVFIVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVDKISALCQDGVLTVTVEKVPPPQPKTIQVQVA
cccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccCEEECcccCEEEEEEccccccccEEEEEEEccEEEEEEECccccccccccccccEEEEEEcccEEEEEEEccccccccccEEEEcccEEEEECcccccccccEEEEEcc
*******GLDSPFFSILEDVLELPEE************VRDAKAMAATPADVMEYPNSYVFIVDMPGIKASEIKVQVESENVLV*****************VKYVRMERRFGKFMRKFVLPDNANVDKISALCQDGVLTVTVE*********IQVQV*
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MDLRSLAGLDSPFFSILEDVLELPEEQEKTRNNPSRAYVRDAKAMAATPADVMEYPNSYVFIVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVDKISALCQDGVLTVTVEKVPPPQPKTIQVQVA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
17.6 kDa class II heat shock protein confidentP29830
18.0 kDa class II heat shock protein probableQ5VRY1
17.3 kDa class II heat shock protein probableO82013

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1GME, chain A
Confidence level:very confident
Coverage over the Query: 42-138
View the alignment between query and template
View the model in PyMOL
Template: 3VQK, chain A
Confidence level:probable
Coverage over the Query: 36-156
View the alignment between query and template
View the model in PyMOL