Citrus Sinensis ID: 031578

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------
Protein Sequence
MGGCLGCFIRPPVNTSASNLSKELGVPGRSAGKRSISEDFWTTSTCDMDNSAVQSQGSISSLGTNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTHQVREPKLNWNATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHcccccccccccHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccEEEEccccccccEcccEEEcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccEEcccccHHHHccccccccccccHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
mggclgcfirppvntsasnlskelgvpgrsagkrsisedfwttstcdmdnsavqsqgsisslgtnnlipdtnggsgsasapsefvnhgflLWNQTRQRWIGnkkaenrthqvrepklnwnATYESllgsnkpfpqpiplsEMVDFLVDIWEQEGMYD
Flexible Loop (DISEMBL)
mggclgcfirppvntsasnlskelgvpgrsagkrsISEDFWTTSTCDMDNSAVQSQGSISSLGTNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKkaenrthqvrepklNWNATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD
Low Complexity Region (SEG)
MGGCLGCFIRPPVNTSASNLSKELGVPGRSAGKRSISEDFWTTSTCDMDNSAVQSQGSISSLGTNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTHQVREPKLNWNATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD
Disordered region (IsUnstruct)
***CLGCFIR*************************************************************************FVNHGFLLWNQTRQRWIGNK************KLNWNATYESLLGSNKPFPQPIPLSEMVDFLVDIWE******
Disordered Region (DISOPRED)
MGGCLG*FIR******************************WT********************************************HGFLLWNQTRQ**********************NATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMY*
Disordered Region (DISEMBL)
MGGCLGCFIRPPVNTSASNLSKE**********RSISEDFWTTSTCDMDNSAVQSQGSISSLGTNNLIPDTN********PSEFVNHGFLLWNQTRQRWIGNKKAENRTHQVREPKLNWNATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD
Disordered Region (DISPRO)
**GCLGCFIRPPVNTSASNLSKELGVPGRSAGK**IS*******************************************PSEFVNHGFLLWNQTRQRWIGNKK*******VREPKLNWNATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGGCLGCFIRPPVNTSASNLSKELGVPGRSAGKRSISEDFWTTSTCDMDNSAVQSQGSISSLGTNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTHQVREPKLNWNATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	157
351720932	160	uncharacterized protein LOC547651 [Glyci	1.0	0.981	0.689	1e-56
255553169	190	conserved hypothetical protein [Ricinus	0.980	0.810	0.703	3e-54
351721931	156	uncharacterized protein LOC100500161 [Gl	0.980	0.987	0.681	4e-54
388517837	159	unknown [Lotus japonicus]	1.0	0.987	0.656	7e-54
357468215	156	hypothetical protein MTR_4g010330 [Medic	0.961	0.967	0.656	4e-53
224059178	160	predicted protein [Populus trichocarpa]	0.987	0.968	0.690	6e-52
356547434	193	PREDICTED: uncharacterized protein LOC10	0.968	0.787	0.664	1e-51
357468213	274	hypothetical protein MTR_4g010330 [Medic	0.949	0.543	0.651	2e-51
351724527	174	uncharacterized protein LOC100499770 [Gl	1.0	0.902	0.610	5e-51
449436152	155	PREDICTED: uncharacterized protein LOC10	0.987	1.0	0.643	6e-51

>gi|351720932|ref|NP_001235913.1| uncharacterized protein LOC547651 [Glycine max] gi|22597160|gb|AAN03467.1| hypothetical protein [Glycine max]

 Score =  224 bits (570), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 109/158 (68%), Positives = 124/158 (78%), Gaps = 1/158 (0%)

Query: 1   MGGCLGCFIRPPVNTSASNLSKELGVPGRSAGKRSISEDFWTTSTCDMDNSAVQSQGSIS 60
           MGGC+GC+ RP ++ +    SK L   G    K S SEDFWTTST DMDNSAVQSQGSIS
Sbjct: 3   MGGCVGCYKRPTLSATVDVPSKGLATQGNGVRKPSSSEDFWTTSTHDMDNSAVQSQGSIS 62

Query: 61  SLG-TNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTHQVREPKLNW 119
           S   TN  +    G S S++ P+EFVNHG +LWNQTRQRW+GNKK ENRT Q+REPKLNW
Sbjct: 63  SASLTNQAVVLHAGSSKSSTNPTEFVNHGVILWNQTRQRWVGNKKLENRTQQLREPKLNW 122

Query: 120 NATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD 157
           NATYESLLGSNKPF QPIPL+EMVDFLVDIWEQ+G+YD
Sbjct: 123 NATYESLLGSNKPFHQPIPLAEMVDFLVDIWEQDGLYD 160

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553169|ref|XP_002517627.1| conserved hypothetical protein [Ricinus communis] gi|223543259|gb|EEF44791.1| conserved hypothetical protein [Ricinus communis]

 Score =  216 bits (550), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 109/155 (70%), Positives = 124/155 (80%), Gaps = 1/155 (0%)

Query: 3   GCLGCFIRPPVNTSASNLSKELGVPGRSAGKRSISEDFWTTSTCDMDNSAVQSQGSISSL 62
           GCLG   +P + T     SK   + G++  K SISEDFWTTSTCDMDNSAVQSQGS+SS+
Sbjct: 37  GCLGSCKKPRL-TLIDEQSKGSNIQGQTVKKPSISEDFWTTSTCDMDNSAVQSQGSMSSI 95

Query: 63  GTNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTHQVREPKLNWNAT 122
            T N   D +G S S SAPS+FVNHG ++WNQTRQRW+G+KK+ NR  Q REPKLNWNAT
Sbjct: 96  STVNQTLDLHGSSSSGSAPSQFVNHGLIVWNQTRQRWVGDKKSLNRARQSREPKLNWNAT 155

Query: 123 YESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD 157
           YESLLGSNKPFP+PIPLSEMVDFLVDIWEQEGMYD
Sbjct: 156 YESLLGSNKPFPRPIPLSEMVDFLVDIWEQEGMYD 190

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721931|ref|NP_001237738.1| uncharacterized protein LOC100500161 [Glycine max] gi|255629494|gb|ACU15093.1| unknown [Glycine max]

 Score =  216 bits (549), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 107/157 (68%), Positives = 124/157 (78%), Gaps = 3/157 (1%)

Query: 1   MGGCLGCFIRPPVNTSASNLSKELGVPGRSAGKRSISEDFWTTSTCDMDNSAVQSQGSIS 60
           MGGCLG F +PP+  +A    K L   G++A K S SEDFW TST DMDNSAVQSQGSIS
Sbjct: 3   MGGCLGPFKKPPLIATADVPPKGLRKQGKAAKKPSTSEDFWITSTHDMDNSAVQSQGSIS 62

Query: 61  SLGTNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTHQVREPKLNWN 120
           S    N   D +GGS +   P+EFVNHG +LWNQTRQ WIGNK+++N+T Q+REPKL+WN
Sbjct: 63  SASITNQAADPHGGSCN---PTEFVNHGLILWNQTRQGWIGNKRSKNQTEQLREPKLSWN 119

Query: 121 ATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD 157
           ATYESLLGSNKPFPQ IPL+EMVDFLVDIWEQEG+YD
Sbjct: 120 ATYESLLGSNKPFPQHIPLAEMVDFLVDIWEQEGLYD 156

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388517837|gb|AFK46980.1| unknown [Lotus japonicus]

 Score =  214 bits (546), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 103/157 (65%), Positives = 119/157 (75%)

Query: 1   MGGCLGCFIRPPVNTSASNLSKELGVPGRSAGKRSISEDFWTTSTCDMDNSAVQSQGSIS 60
           MGGC+GC+ RP + T+    ++ L   G +  K S SEDFWTTST DMDNSAVQSQGSIS
Sbjct: 3   MGGCVGCYKRPTLVTTVDEPTQGLTTQGEAVKKHSTSEDFWTTSTHDMDNSAVQSQGSIS 62

Query: 61  SLGTNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTHQVREPKLNWN 120
           S    N     +G S  +S P+EFVN G  LWNQTRQRW+G KK E RT Q+REPKL+WN
Sbjct: 63  SASVTNQAVVPHGVSSKSSNPTEFVNQGLNLWNQTRQRWVGPKKPETRTQQLREPKLSWN 122

Query: 121 ATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD 157
           ATYESLLGSNKPF QPIPL+EMVDFLVDIWEQ+G+YD
Sbjct: 123 ATYESLLGSNKPFRQPIPLAEMVDFLVDIWEQDGLYD 159

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357468215|ref|XP_003604392.1| hypothetical protein MTR_4g010330 [Medicago truncatula] gi|355505447|gb|AES86589.1| hypothetical protein MTR_4g010330 [Medicago truncatula] gi|388496552|gb|AFK36342.1| unknown [Medicago truncatula]

 Score =  212 bits (539), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 105/160 (65%), Positives = 123/160 (76%), Gaps = 9/160 (5%)

Query: 1   MGGCLGCFIRPP---VNTSASNLSKELGVPGRSAGKRSISEDFWTTSTCDMDNSAVQSQG 57
           MGGC+GC+ RP    V   ++ L+K+    G++  K S SEDFWTTST DMDNSAVQSQG
Sbjct: 3   MGGCVGCYKRPALVTVEVPSTGLTKQ----GKAVDKPSTSEDFWTTSTHDMDNSAVQSQG 58

Query: 58  SISSLGTNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTHQVREPKL 117
           SISS    N        + S++ PSEFVNHG +LWNQTRQRW+GNKK ENRT Q+REPKL
Sbjct: 59  SISSTSLTNQA--VAAHASSSNNPSEFVNHGLILWNQTRQRWVGNKKPENRTQQLREPKL 116

Query: 118 NWNATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD 157
           +WNATYESLL SNKPF QPIPL+EMVDFLVDIWEQ+G+YD
Sbjct: 117 SWNATYESLLTSNKPFRQPIPLAEMVDFLVDIWEQDGLYD 156

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224059178|ref|XP_002299754.1| predicted protein [Populus trichocarpa] gi|118485078|gb|ABK94402.1| unknown [Populus trichocarpa] gi|222847012|gb|EEE84559.1| predicted protein [Populus trichocarpa]

 Score =  208 bits (530), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 107/155 (69%), Positives = 119/155 (76%)

Query: 3   GCLGCFIRPPVNTSASNLSKELGVPGRSAGKRSISEDFWTTSTCDMDNSAVQSQGSISSL 62
           GCLGC+ +P + TS    SK   V   +  K SISEDFWTTSTCDMD SAVQSQGSISS+
Sbjct: 6   GCLGCYNKPTLITSVGEQSKGPKVKCETVKKPSISEDFWTTSTCDMDYSAVQSQGSISSI 65

Query: 63  GTNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTHQVREPKLNWNAT 122
              N   D +GGSGS +  SEFVNHG LLWNQTR  W+GNK++ N     +EPKLNWNAT
Sbjct: 66  SIANQTLDQHGGSGSINNVSEFVNHGLLLWNQTRHCWVGNKRSGNEEQLPQEPKLNWNAT 125

Query: 123 YESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD 157
           YESLLGSNKPFPQPIPL+EMVDFLVDIWEQEGMYD
Sbjct: 126 YESLLGSNKPFPQPIPLTEMVDFLVDIWEQEGMYD 160

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547434|ref|XP_003542117.1| PREDICTED: uncharacterized protein LOC100802439 [Glycine max]

 Score =  207 bits (527), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 103/155 (66%), Positives = 121/155 (78%), Gaps = 3/155 (1%)

Query: 3   GCLGCFIRPPVNTSASNLSKELGVPGRSAGKRSISEDFWTTSTCDMDNSAVQSQGSISSL 62
           GCLG F +PP+  +A    K L   G++A K S SEDFW TST DMDNSAVQSQGSISS 
Sbjct: 42  GCLGPFKKPPLIATADVPPKGLRKQGKAAKKPSTSEDFWITSTHDMDNSAVQSQGSISSA 101

Query: 63  GTNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTHQVREPKLNWNAT 122
              N   D +GGS +   P+EFVNHG +LWNQTRQ WIGNK+++N+T Q+REPKL+WNAT
Sbjct: 102 SITNQAADPHGGSCN---PTEFVNHGLILWNQTRQAWIGNKRSKNQTEQLREPKLSWNAT 158

Query: 123 YESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD 157
           YESLLGSNKPFPQ I L+EMV+FLVDIWEQEG+YD
Sbjct: 159 YESLLGSNKPFPQHISLAEMVEFLVDIWEQEGLYD 193

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357468213|ref|XP_003604391.1| hypothetical protein MTR_4g010330 [Medicago truncatula] gi|355505446|gb|AES86588.1| hypothetical protein MTR_4g010330 [Medicago truncatula]

 Score =  206 bits (525), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 103/158 (65%), Positives = 121/158 (76%), Gaps = 9/158 (5%)

Query: 3   GCLGCFIRPP---VNTSASNLSKELGVPGRSAGKRSISEDFWTTSTCDMDNSAVQSQGSI 59
           GC+GC+ RP    V   ++ L+K+    G++  K S SEDFWTTST DMDNSAVQSQGSI
Sbjct: 123 GCVGCYKRPALVTVEVPSTGLTKQ----GKAVDKPSTSEDFWTTSTHDMDNSAVQSQGSI 178

Query: 60  SSLGTNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTHQVREPKLNW 119
           SS    N        + S++ PSEFVNHG +LWNQTRQRW+GNKK ENRT Q+REPKL+W
Sbjct: 179 SSTSLTN--QAVAAHASSSNNPSEFVNHGLILWNQTRQRWVGNKKPENRTQQLREPKLSW 236

Query: 120 NATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD 157
           NATYESLL SNKPF QPIPL+EMVDFLVDIWEQ+G+YD
Sbjct: 237 NATYESLLTSNKPFRQPIPLAEMVDFLVDIWEQDGLYD 274

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724527|ref|NP_001235781.1| uncharacterized protein LOC100499770 [Glycine max] gi|255626433|gb|ACU13561.1| unknown [Glycine max]

 Score =  205 bits (522), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 105/172 (61%), Positives = 123/172 (71%), Gaps = 15/172 (8%)

Query: 1   MGGCLGCFIRPPVNTSASNLSKELGVPGRSAGKRSISEDFWTTSTCDMDNSAVQSQGSIS 60
           MGGC+GC+ RP ++ +    SK L        K S SEDFWTTST DMDNSAVQSQGSIS
Sbjct: 3   MGGCVGCYKRPSLSPTVDVPSKGLATQSNVVRKPSSSEDFWTTSTHDMDNSAVQSQGSIS 62

Query: 61  SLG-TNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTHQVREPKL-- 117
           S   TN  +    G S S++ P+EFVNHG +LWNQTRQRW+GNKK EN+T Q++EPKL  
Sbjct: 63  SASLTNQAVVSHAGSSKSSTNPTEFVNHGVILWNQTRQRWVGNKKPENQTQQLQEPKLRT 122

Query: 118 ------------NWNATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD 157
                       +WNATYESLLGSNKPF QPIPL+EMVDFLVDIWEQ+G+YD
Sbjct: 123 YCLCLAKNFWLCSWNATYESLLGSNKPFRQPIPLAEMVDFLVDIWEQDGLYD 174

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449436152|ref|XP_004135858.1| PREDICTED: uncharacterized protein LOC101208775 isoform 3 [Cucumis sativus] gi|449491036|ref|XP_004158780.1| PREDICTED: uncharacterized LOC101208775 isoform 3 [Cucumis sativus]

 Score =  205 bits (521), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 101/157 (64%), Positives = 119/157 (75%), Gaps = 2/157 (1%)

Query: 1   MGGCLGCFIRPPVNTSASNLSKELGVPGRSAGKRSISEDFWTTSTCDMDNSAVQSQGSIS 60
           MGGCLGC+ +P + T  +  SK   +      K S+SEDFWTTST D+DNSA QSQGS+S
Sbjct: 1   MGGCLGCYTKPKLKTHLNEPSKGQQIQCHGLRKPSLSEDFWTTSTFDVDNSAGQSQGSMS 60

Query: 61  SLGTNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTHQVREPKLNWN 120
           SL T N + D +G SG+   PSEF+NHG LLWNQTRQRW GNK++E    Q +EPKL+WN
Sbjct: 61  SLSTINHMHDPHGSSGNVPNPSEFLNHGLLLWNQTRQRWTGNKRSEKP--QFQEPKLDWN 118

Query: 121 ATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD 157
            TYESLLGSNKPF QPIPL EMVDFLVD+WEQEG+YD
Sbjct: 119 VTYESLLGSNKPFRQPIPLGEMVDFLVDVWEQEGLYD 155

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	157
TAIR|locus:2145442	169	AT5G25360 "AT5G25360" [Arabido	0.961	0.893	0.582	7.9e-46
TAIR|locus:2037878	154	AT1G15350 "AT1G15350" [Arabido	0.974	0.993	0.563	8.4e-42
TAIR|locus:2093292	162	AT3G15770 "AT3G15770" [Arabido	0.974	0.944	0.518	1.3e-38
TAIR|locus:4515103481	161	AT4G32342 "AT4G32342" [Arabido	0.891	0.869	0.471	2.7e-29
TAIR|locus:2142689	98	AT5G03440 "AT5G03440" [Arabido	0.541	0.867	0.449	2e-17
TAIR|locus:2082707	112	AT3G54880 "AT3G54880" [Arabido	0.611	0.857	0.387	2.5e-17

TAIR|locus:2145442 AT5G25360 "AT5G25360" [Arabidopsis thaliana (taxid:3702)]

 Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
 Identities = 92/158 (58%), Positives = 114/158 (72%)

Query:     1 MGGCLGCFIRPPVNTSASNLSKELGVPGRSAGKRSISEDFWTTSTCDMDNSAVQSQGSIS 60
             MGGC GC  +PP+  +    SK L + GR   K S+SEDFW+TSTC+MDNS +QSQ S+S
Sbjct:    18 MGGCFGCCNKPPLIVAVDEPSKGLRIQGRLVKKPSVSEDFWSTSTCEMDNSTLQSQRSMS 77

Query:    61 SLG-TNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTHQVREPKLNW 119
             S+  TNN        S S S P+EFVNHG  LWNQTRQ+W+ N  ++ +  +VREP ++W
Sbjct:    78 SISFTNN-----TSTSASTSNPTEFVNHGLNLWNQTRQQWLANGTSQKKA-KVREPTISW 131

Query:   120 NATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD 157
             NATYESLLG NK F +PIPL EMVDFLVD+WEQEG+YD
Sbjct:   132 NATYESLLGMNKRFSRPIPLPEMVDFLVDVWEQEGLYD 169

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2037878 AT1G15350 "AT1G15350" [Arabidopsis thaliana (taxid:3702)]

 Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
 Identities = 89/158 (56%), Positives = 109/158 (68%)

Query:     1 MGGCLGCFIRPPVNTSASNLSKELGVPGRSAGKRSISEDFWTTSTCDMDNSAVQSQGSIS 60
             MGGC+GC+ R   +T+AS          R   K S+SEDFW+TST DMDN    SQGS+S
Sbjct:     1 MGGCVGCY-REHRSTAASLKDPPSNSIARPCKKPSVSEDFWSTSTVDMDNITFPSQGSLS 59

Query:    61 SLGTNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTHQVREPKLNWN 120
             S   +N   D+   + +++AP E+VN G LLWNQTR+RW+G  K  N     +  KLNWN
Sbjct:    60 S---SNQTFDSQSAARNSNAPPEYVNQGLLLWNQTRERWVGKDKPNNPVDHNQGAKLNWN 116

Query:   121 -ATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD 157
              ATY+SLLGSNK FPQPIPL+EMVDFLVDIWEQEG+YD
Sbjct:   117 TATYDSLLGSNKLFPQPIPLTEMVDFLVDIWEQEGLYD 154

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2093292 AT3G15770 "AT3G15770" [Arabidopsis thaliana (taxid:3702)]

 Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
 Identities = 85/164 (51%), Positives = 112/164 (68%)

Query:     1 MGG-CLGCFIRPPVNTSAS---NLSKELGVPG--RSAGKRSI--SEDFWTTSTCDMDNSA 52
             MG  CL CF +    TS     N +K++ V        K S+  SEDFWT +T DM+++A
Sbjct:     1 MGSSCLACFDKSKAKTSVDVPLNGTKDVLVEEDWSELRKPSVVASEDFWTNTTLDMESNA 60

Query:    53 VQSQGSISSLGTNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTHQV 112
                 GS+SS+ T NL  D+ G   S++ P+EFVNHG +LWNQTRQ+W+G+K++E+R    
Sbjct:    61 ---HGSVSSISTTNLTIDSQGCGSSSNEPAEFVNHGLVLWNQTRQQWVGDKRSESRKSVG 117

Query:   113 REPKLNWNATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMY 156
             REP LN N TYESLLGSNK FP+PIPL EMV FLV++WE+EG+Y
Sbjct:   118 REPILNENVTYESLLGSNKRFPRPIPLDEMVQFLVEVWEEEGLY 161

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:4515103481 AT4G32342 "AT4G32342" [Arabidopsis thaliana (taxid:3702)]

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 74/157 (47%), Positives = 93/157 (59%)

Query:     4 CLGCFIRPP-VNTSASNLSKELGVPGRSAGKRSIS-EDFWTTSTCDMD-NSAVQSQGSIS 60
             C GC  R   +       SK L + G+   K S S +DFW+TSTCDMD N  +QSQ S  
Sbjct:    17 CFGCCNRERRLVVEVDEPSKGLKIQGKIVKKDSASSDDFWSTSTCDMDHNITIQSQSSNP 76

Query:    61 SLGTNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTH-QVREPKLNW 119
                     P       S S  +EFVNHG +LWN TRQ+W   ++   R    V EP ++W
Sbjct:    77 PFD-----PQC-----STSNSTEFVNHGLILWNHTRQQW---RECLTRQQCLVPEPAISW 123

Query:   120 NATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMY 156
             N+TY+SLL +NK FPQPIPL EMV FLVD+WE+EG+Y
Sbjct:   124 NSTYDSLLSTNKLFPQPIPLKEMVHFLVDVWEEEGLY 160

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2142689 AT5G03440 "AT5G03440" [Arabidopsis thaliana (taxid:3702)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 40/89 (44%), Positives = 59/89 (66%)

Query:    71 TNGGSGSASAPSE-FVNHGFLLWNQTRQRWIGNKKAENRTHQVR-EPKLNWNATYESLLG 128
             +N  +    +  E FVNH  + W + R++W+G+    NRT ++  EP + +NATYE LL 
Sbjct:    12 SNSSNDKEKSSEEIFVNHAEIAWQEMRKKWVGDPS--NRTSEMPDEPVIGFNATYEDLLT 69

Query:   129 SNKPFPQPIPLSEMVDFLVDIWEQEGMYD 157
             SN PF +PIPL+EMVDFL DIW  +G+++
Sbjct:    70 SNTPFNKPIPLAEMVDFLFDIWHGDGLFE 98

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2082707 AT3G54880 "AT3G54880" [Arabidopsis thaliana (taxid:3702)]

 Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
 Identities = 38/98 (38%), Positives = 62/98 (63%)

Query:    61 SLGTNNLIPDTNGGSGSASAPS-EFVNHGFLLWNQTRQRWIGNKKAENRTHQVREPKLNW 119
             +L  + L+ D      + S  +   VNHG  +W + R++W+G++  + R +  ++  ++W
Sbjct:    16 TLELSKLVKDEKSSVKTNSENTLTLVNHGAKMWQENREKWVGDQSRQ-RKNTAKDQIISW 74

Query:   120 NATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD 157
             + TYE LL +++PF + IPL EMVDFLVDIW  EG+YD
Sbjct:    75 STTYEDLLSTHEPFSESIPLPEMVDFLVDIWYDEGLYD 112


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.130   0.406    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      157       157   0.00079  106 3  11 23  0.43    32
                                                     30  0.42    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  173 KB (2100 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.12u 0.10s 17.22t   Elapsed:  00:00:01
  Total cpu time:  17.13u 0.10s 17.23t   Elapsed:  00:00:01
  Start:  Thu May  9 13:47:32 2013   End:  Thu May  9 13:47:33 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pm.C_LG_I0570 SubName- Full=Putative uncharacterized protein; (161 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	157
pfam13259	114	pfam13259, DUF4050, Protein of unknown function (D	3e-50

>gnl|CDD|222012 pfam13259, DUF4050, Protein of unknown function (DUF4050)

 Score =  156 bits (397), Expect = 3e-50
 Identities = 54/119 (45%), Positives = 71/119 (59%), Gaps = 7/119 (5%)

Query: 41  WTTSTCDMDNSAVQSQGSISSLGTNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWI 100
           W+TS  D D+S   SQ SISS  ++           S+  P EFVNHG  LW + R  W 
Sbjct: 1   WSTSPYDFDSSDAVSQRSISSQSSD-----RRKRRKSSEEPEEFVNHGLRLWEERRDAWT 55

Query: 101 GNKKAENRTHQVRE--PKLNWNATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD 157
           G +K+   ++ +RE  P L++NA YE L+G NKP  QPI LS+MV FLV  WEQEG++ 
Sbjct: 56  GARKSNEESNPIRESIPPLSYNAIYEKLVGQNKPLKQPINLSDMVKFLVAGWEQEGLWP 114

This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between 109 and 173 amino acids in length. There are two conserved sequence motifs: IPL and FLVD. Length = 114

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	157
PF13259	122	DUF4050: Protein of unknown function (DUF4050)	100.0

>PF13259 DUF4050: Protein of unknown function (DUF4050)

Probab=100.00  E-value=5.4e-40  Score=249.16  Aligned_cols=113  Identities=53%  Similarity=0.939  Sum_probs=97.8

Q ss_pred             cccccccccCcccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHhhhcCCcCCc-------ccccCC
Q 031578           41 WTTSTCDMDNSAVQSQGSISSLGTNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAEN-------RTHQVR  113 (157)
Q Consensus        41 Wsss~~emdns~~~Sq~s~ssis~~n~~~d~~~~~~~~~~~~~FVNhGl~~W~q~R~qWvg~~~~~~-------~~~~~r  113 (157)
                      ||||+++|||+++|+|+++++.   ++..+.+........ ++||||||++|+++|++|||+++...       +....|
T Consensus         1 ~s~s~~~~d~~~~~~~~~~s~~---~~~~~~~~~~~~~~~-~~~~N~Gl~lW~~rR~~W~~~~~~~~~~~~~l~~~~~~r   76 (122)
T PF13259_consen    1 WSSSPFRFDNSDAQSQRSISST---NSSSDCSKRRKSSEE-EEFVNHGLILWEQRRQQWTGPKKSNKIIEPRLQQSNSIR   76 (122)
T ss_pred             CCCCcccCcChhhhhhhccccc---cchhhhhhhhccccC-ccceeHHHHHHHHHHHHHcCCCCcccccccccccccccc
Confidence            9999999999999999999444   444444433323344 99999999999999999999988874       444688


Q ss_pred             C--CceecccchhcccCCCCCCCCCCChHHHHHHHHHHHhhcCCCC
Q 031578          114 E--PKLNWNATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD  157 (157)
Q Consensus       114 e--p~iswnatye~LLgsnkpFpqPIPL~EMVDfLVDiWE~EGLyd  157 (157)
                      +  |.++|++|||+||++++||++||||+|||+||||+|++||+||
T Consensus        77 ~~Ip~~~y~~iY~~Lv~~~~pf~~PI~L~dmv~~Lv~gW~~eg~w~  122 (122)
T PF13259_consen   77 ESIPPISYPAIYEKLVGSNKPFKQPIPLSDMVDFLVDGWEEEGLWP  122 (122)
T ss_pred             cccchhhHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHHhhcCCccC
Confidence            8  9999999999999999999999999999999999999999997

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00