Citrus Sinensis ID: 031762

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150---
Protein Sequence
MEGRKQTGSSSSLTNELFGSKESSSSSGIFGSIFSPPSKVLGRESLHSESMEKKHDSSKEAWNTKPTTPGDASRSYETESQGTAYKDMSSMYQDQRVQPCHLSSSIYYGGQDVYSPRPPNSQGPGVNSVFKKDGEDDSGSASRGNWWQGSLYY
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccEEcccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccHHHHccccccccccccHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEcccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
megrkqtgssssltnelfgskesssssgifgsifsppskvlgreslhsesmekkhdsskeawntkpttpgdasrsyetesqgtaykdmssmyqdqrvqpchlsssiyyggqdvysprppnsqgpgvnsvfkkdgeddsgsasrgnwwqgslyy
Flexible Loop (DISEMBL)
megrkqtgssssltnelfgskesssssgifgSIFSPPSKVLGRESLHSESMekkhdsskeawntkpttpgdasrsyeteSQGTAYKDMSSMYQDQRVQPCHLSSSIYYGGQDVYSPRPPNSQGPGVNSVFKkdgeddsgsasrgnwwqgslyy
Low Complexity Region (SEG)
MEGRKQTGSSSSLTNELFGSKEsssssgifgsifsppsKVLGRESLHSESMEKKHDSSKEAWNTKPTTPGDASRSYETESQGTAYKDMSSMYQDQRVQPCHLSSSIYYGGQDVYSPRPPNSQGPGVNSVFKKDGEDDSGSASRGNWWQGSLYY
Disordered region (IsUnstruct)
****************************************************************************************************HLSSSIYYGG*******************************************
Disordered Region (DISOPRED)
****************************************************************************************************HLSSSIYYGGQDV***************************ASRGNWWQGSLYY
Disordered Region (DISEMBL)
***************************GIFGSIFSPPSKVLGR**************************************GTAYKDMSSMYQDQRVQPCHLSSSIYYGGQDVYSPRPPNSQGPGVNSVFKK**********RGNWWQGSLYY
Disordered Region (DISPRO)
*******************************************************************************************YQDQRVQPCHLSSSIYYGGQDVYS**************************S***WWQ*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEGRKQTGSSSSLTNELFGSKESSSSSGIFGSIFSPPSKVLGRESLHSESMEKKHDSSKEAWNTKPTTPGDASRSYETESQGTAYKDMSSMYQDQRVQPCHLSSSIYYGGQDVYSPRPPNSQGPGVNSVFKKDGEDDSGSASRGNWWQGSLYY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	153
225440524	159	PREDICTED: uncharacterized protein LOC10	0.993	0.955	0.631	6e-42
209967471	157	hypothetical protein [Populus euphratica	0.967	0.942	0.658	2e-41
209967469	157	hypothetical protein [Populus tremula x	0.967	0.942	0.670	2e-41
449460363	158	PREDICTED: uncharacterized protein LOC10	0.993	0.962	0.610	5e-41
224087557	174	predicted protein [Populus trichocarpa]	0.967	0.850	0.593	5e-40
357505741	156	hypothetical protein MTR_7g065150 [Medic	0.973	0.955	0.618	6e-37
388494636	153	unknown [Lotus japonicus]	0.973	0.973	0.598	5e-36
225434778	154	PREDICTED: uncharacterized protein LOC10	0.967	0.961	0.534	2e-32
388492094	172	unknown [Medicago truncatula]	0.934	0.831	0.593	6e-32
356494879	153	PREDICTED: uncharacterized protein LOC10	0.973	0.973	0.560	7e-32

>gi|225440524|ref|XP_002275314.1| PREDICTED: uncharacterized protein LOC100252790 isoform 1 [Vitis vinifera] gi|359481721|ref|XP_003632663.1| PREDICTED: uncharacterized protein LOC100252790 isoform 2 [Vitis vinifera] gi|297740289|emb|CBI30471.3| unnamed protein product [Vitis vinifera]

 Score =  175 bits (443), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 101/160 (63%), Positives = 116/160 (72%), Gaps = 8/160 (5%)

Query: 1   MEGRKQTGSSSS--LTNELFGSKESS----SSSGIFGSIFSPPSKVLGRESLHSESMEKK 54
           MEG+K+ GSSSS     +LFGSKESS    SS+GIF SIFS  SKVLGRESL  +  +KK
Sbjct: 1   MEGKKRAGSSSSSSFATDLFGSKESSYPSPSSTGIFASIFSTSSKVLGRESLRPDLTKKK 60

Query: 55  HDSSKEAWNTKPTTPGDASRSYETESQGTAYKDMSSMYQDQRVQPCHLSSSIYYGGQDVY 114
            DS  E WN KP T  +A +  E ESQ  + +D  S YQ+QRVQPCHLSSSIYYGGQD+Y
Sbjct: 61  QDSGNEVWNAKPGTTENALQQSEGESQSISNRDTGSFYQEQRVQPCHLSSSIYYGGQDIY 120

Query: 115 SPRPPNSQGPGVNSVFKKD-GEDDSGSASRGNWWQGSLYY 153
              P NSQ  G+ S+ KKD GEDD+GSASRGNWWQGSLYY
Sbjct: 121 F-HPQNSQSSGMPSMLKKDSGEDDTGSASRGNWWQGSLYY 159

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|209967471|gb|ACJ02360.1| hypothetical protein [Populus euphratica]

 Score =  173 bits (439), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/155 (65%), Positives = 117/155 (75%), Gaps = 7/155 (4%)

Query: 1   MEGRKQTGSSSS-LTNELFGSKESS-SSSGIFGSIFSPPS-KVLGRESLHSESMEKKHDS 57
           MEG+KQTGSSSS  T++LFGSKE+S SS GIFGSIF+P S KVLGRESL  E  EKK DS
Sbjct: 1   MEGKKQTGSSSSSFTSDLFGSKENSPSSMGIFGSIFAPASPKVLGRESLRFEVAEKKQDS 60

Query: 58  SKEAWNTKPTTPGD--ASRSYETESQGTAYKDMSSMYQDQRVQPCHLSSSIYYGGQDVYS 115
           + +AWNTK   P     S+  E ESQ    KDMSS+YQ+QRVQPCHLSSSIYYGGQD+Y 
Sbjct: 61  ADDAWNTKSGIPASDLTSKMNEDESQSVPNKDMSSIYQEQRVQPCHLSSSIYYGGQDIYH 120

Query: 116 PRPPNSQGPGVNSVFKKDG-EDDSGSASRGNWWQG 149
             P  +    +N +FKKDG EDD+GSASRGNWWQG
Sbjct: 121 -HPQTAHTSSMNPMFKKDGPEDDTGSASRGNWWQG 154

Source: Populus euphratica

Species: Populus euphratica

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|209967469|gb|ACJ02359.1| hypothetical protein [Populus tremula x Populus alba]

 Score =  173 bits (438), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/155 (67%), Positives = 118/155 (76%), Gaps = 7/155 (4%)

Query: 1   MEGRKQTGSSSS-LTNELFGSKE-SSSSSGIFGSIFSPPS-KVLGRESLHSESMEKKHDS 57
           MEG+KQTGSSSS  T++LFGSKE SSSS+GIFGSIF+P S KVLGRESL  E  EKK DS
Sbjct: 1   MEGKKQTGSSSSSFTSDLFGSKEYSSSSTGIFGSIFAPASPKVLGRESLRFEVDEKKQDS 60

Query: 58  SKEAWNTKPTTPGD--ASRSYETESQGTAYKDMSSMYQDQRVQPCHLSSSIYYGGQDVYS 115
           + +AWNTK  TP     S+  E ESQ    KDMSS+YQ+QRVQPCHLSSSIYYGGQD+Y 
Sbjct: 61  ADDAWNTKSGTPTSDLTSKMNEGESQSIPNKDMSSIYQEQRVQPCHLSSSIYYGGQDIYH 120

Query: 116 PRPPNSQGPGVNSVFKKDG-EDDSGSASRGNWWQG 149
             P  +     N +FKKDG EDD+GSASRGNWWQG
Sbjct: 121 -HPQTAHTSSKNPMFKKDGPEDDTGSASRGNWWQG 154

Source: Populus tremula x Populus alba

Species: Populus tremula x Populus alba

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460363|ref|XP_004147915.1| PREDICTED: uncharacterized protein LOC101215701 [Cucumis sativus]

 Score =  172 bits (435), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 97/159 (61%), Positives = 115/159 (72%), Gaps = 7/159 (4%)

Query: 1   MEGRKQTGSSSSLTN---ELFGSKESS--SSSGIFGSIFSPPSKVLGRESLHSESMEKKH 55
           MEG+K  G  SS ++   +LFGS E+S  S++GIFGSIF+P SKVLGRESL S + E++ 
Sbjct: 1   MEGKKHVGLGSSSSSLTTDLFGSNETSYSSTTGIFGSIFAPSSKVLGRESLLSHTKERER 60

Query: 56  DSSKEAWNTKPTTPGDASRSYETESQGTAYKDMSSMYQDQRVQPCHLSSSIYYGGQDVYS 115
           +S  E WN       D +   + ESQ T  KDMSS+YQDQR QPCHLSSSIYYGGQDVY+
Sbjct: 61  NSVNEPWNPNAGAQDDNANHTQKESQETKNKDMSSIYQDQRAQPCHLSSSIYYGGQDVYT 120

Query: 116 PRPPNSQGPGVNSVFKKDG-EDDSGSASRGNWWQGSLYY 153
             P NS   G NS +KK+G EDDSGSASRGNWWQGSLYY
Sbjct: 121 -HPQNSYNSGANSAYKKEGGEDDSGSASRGNWWQGSLYY 158

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224087557|ref|XP_002308189.1| predicted protein [Populus trichocarpa] gi|222854165|gb|EEE91712.1| predicted protein [Populus trichocarpa]

 Score =  169 bits (427), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 102/172 (59%), Positives = 118/172 (68%), Gaps = 24/172 (13%)

Query: 1   MEGRKQTGSSSS-LTNELFGSKESS-SSSGIFGSIFSPPS------------------KV 40
           MEG+KQTGSSSS  T++LFGSKE+S SS GIFGSIF+P S                  +V
Sbjct: 1   MEGKKQTGSSSSSFTSDLFGSKENSPSSMGIFGSIFAPASPKVLIIARRAKFIVLVLIQV 60

Query: 41  LGRESLHSESMEKKHDSSKEAWNTKPTTPGD--ASRSYETESQGTAYKDMSSMYQDQRVQ 98
           LGRESL  E  EKK DS+ +AWNTK  TP     S+  E ESQ    KDMSS+YQ+QRVQ
Sbjct: 61  LGRESLRFEVAEKKQDSADDAWNTKSGTPASDLTSKMNEGESQSVPNKDMSSIYQEQRVQ 120

Query: 99  PCHLSSSIYYGGQDVYSPRPPNSQGPGVNSVFKKDG-EDDSGSASRGNWWQG 149
           PCHLSSSIYYGGQD+Y   P  +    +N +FKKDG EDD+GSASRGNWWQG
Sbjct: 121 PCHLSSSIYYGGQDIYH-HPQTAHTSSINPMFKKDGPEDDTGSASRGNWWQG 171

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357505741|ref|XP_003623159.1| hypothetical protein MTR_7g065150 [Medicago truncatula] gi|355498174|gb|AES79377.1| hypothetical protein MTR_7g065150 [Medicago truncatula] gi|388492720|gb|AFK34426.1| unknown [Medicago truncatula]

 Score =  158 bits (400), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 99/160 (61%), Positives = 118/160 (73%), Gaps = 11/160 (6%)

Query: 1   MEGRKQTGSSSSLTNE----LFGSKE--SSSSSGIFGSIFSPPSKVLGRESLHSESMEKK 54
           MEGRKQ GSSSS T+     LFGS +   SS+SGIF SIFSP SKV GRESL S +M  K
Sbjct: 1   MEGRKQFGSSSSETSSFTSELFGSNDLHKSSASGIFDSIFSPSSKVFGRESLRS-AMNGK 59

Query: 55  HDSSKEAWNTKPTTPGDASRSYETESQGTAYKDMSSMYQDQRVQPCHLSSSIYYGGQDVY 114
             ++ E  N+K  T    S+  + E+Q    KDMS +YQ+QRVQPCHLSSSIYYGGQDVY
Sbjct: 60  --TATEGSNSKIDTQEYISKGNDGETQNKTNKDMSYIYQEQRVQPCHLSSSIYYGGQDVY 117

Query: 115 SPRPPNSQGPGVNSVFKKD-GEDDSGSASRGNWWQGSLYY 153
           S RP +++  G+N+++KKD GEDDSGSASRGNWWQGSLYY
Sbjct: 118 S-RPQSARDSGLNTMYKKDGGEDDSGSASRGNWWQGSLYY 156

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388494636|gb|AFK35384.1| unknown [Lotus japonicus]

 Score =  155 bits (392), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 94/157 (59%), Positives = 109/157 (69%), Gaps = 8/157 (5%)

Query: 1   MEGRKQTGSSSSLTNELFGSKES--SSSSGIFGSIFSPPS-KVLGRESLHSESMEKKHDS 57
           M+ +KQ G+SSS T ELFGSKES  S SSGIFGSIFSPPS KVLGRESL SE   K   +
Sbjct: 1   MDEKKQKGTSSSFTAELFGSKESHPSPSSGIFGSIFSPPSPKVLGRESLRSELSVK---T 57

Query: 58  SKEAWNTKPTTPGDASRSYETESQGTAYKDMSSMYQDQRVQPCHLSSSIYYGGQDVYSPR 117
           + E W++K     D S+    E+Q T  KDMS +YQ QR+ PC LSSSIYYGGQD Y   
Sbjct: 58  ANETWSSKIGIQDDVSKGNYGEAQHTENKDMSFIYQHQRIPPCPLSSSIYYGGQDTYY-H 116

Query: 118 PPNSQGPGVNSVFKKD-GEDDSGSASRGNWWQGSLYY 153
             ++Q  G N++ K D G DDSG ASRGNWWQGSLYY
Sbjct: 117 SQSTQNAGSNTLHKNDVGNDDSGMASRGNWWQGSLYY 153

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434778|ref|XP_002281905.1| PREDICTED: uncharacterized protein LOC100263768 [Vitis vinifera] gi|297745986|emb|CBI16042.3| unnamed protein product [Vitis vinifera]

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/159 (53%), Positives = 108/159 (67%), Gaps = 11/159 (6%)

Query: 1   MEGRKQTGSSSSLTNELFGSKES--SSSSGIFGSIFSPPSKVLGRESLHSESMEKKHDSS 58
           MEGR+Q GSSSS T+ELFG+KES  S+SSGIF SIF PPS  +GR   +SE    +  S 
Sbjct: 1   MEGRRQVGSSSSFTSELFGTKESPPSNSSGIFASIFPPPSTAVGRNPANSE---MRGLSG 57

Query: 59  KEAWNTKPTTPGDASRSYETESQGTAYKDMSSMYQDQRVQPCHLSSSIYYGGQDVYSPRP 118
            + W+TK  TP D  +S    S     KD + ++Q++RV+PCHLSSS+YYGGQD+YS   
Sbjct: 58  NQTWDTKQGTP-DMGKSGVGASSIIPNKDKNQIFQEERVEPCHLSSSLYYGGQDIYS-NS 115

Query: 119 PNSQGPGVNSVFKKDGEDDSGS----ASRGNWWQGSLYY 153
            ++Q  G   VFKKD +D +G+    ASRGNWWQGSLYY
Sbjct: 116 SSTQTSGSYPVFKKDEDDPNGNNSQGASRGNWWQGSLYY 154

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388492094|gb|AFK34113.1| unknown [Medicago truncatula]

 Score =  142 bits (357), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 92/155 (59%), Positives = 111/155 (71%), Gaps = 12/155 (7%)

Query: 1   MEGRKQTGSSSSLTNE----LFGSKE--SSSSSGIFGSIFSPPSKVLGRESLHSESMEKK 54
           MEGRKQ GSS S T+     LFGS +   SS+SGIF SIFSP SKV GRESL S +M  K
Sbjct: 1   MEGRKQFGSSFSETSSFTSELFGSNDLHKSSASGIFDSIFSPSSKVFGRESLRS-AMNGK 59

Query: 55  HDSSKEAWNTKPTTPGDASRSYETESQGTAYKDMSSMYQDQRVQPCHLSSSIYYGGQDVY 114
             ++ E  N+K  T    S+  + E+Q    KDMS +YQ+QRVQPCHLSSSIYYGGQDVY
Sbjct: 60  --TATEGSNSKIDTQEYISKGNDGETQNKTNKDMSYIYQEQRVQPCHLSSSIYYGGQDVY 117

Query: 115 SPRPPNSQGPGVNSV-FKKD-GEDDSGSASRGNWW 147
           S RP +++  G+N++ +KKD GEDDSGSASRGNWW
Sbjct: 118 S-RPQSARDSGLNTMQYKKDGGEDDSGSASRGNWW 151

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356494879|ref|XP_003516310.1| PREDICTED: uncharacterized protein LOC100775733 [Glycine max]

 Score =  142 bits (357), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 88/157 (56%), Positives = 105/157 (66%), Gaps = 8/157 (5%)

Query: 1   MEGRKQTGSSSSLTNELFGSKESSSSSGIFGSIFS---PPSKVLGRESLHSESMEKKHDS 57
           MEG KQ G+SSS T+ELFGSKES  SS           P SKVLGRESL SE   K    
Sbjct: 1   MEGNKQKGASSSFTSELFGSKESRPSSSSGIFGSIFSPPSSKVLGRESLRSEMSSKI--- 57

Query: 58  SKEAWNTKPTTPGDASRSYETESQGTAYKDMSSMYQDQRVQPCHLSSSIYYGGQDVYSPR 117
           + E W+++     + S+ Y +E+     KDMSS+YQDQRVQPCHLSSSIYYGGQD+YS  
Sbjct: 58  ANETWSSRIGIQDNFSKGYGSEAPNAVNKDMSSIYQDQRVQPCHLSSSIYYGGQDIYS-N 116

Query: 118 PPNSQGPGVNSVFKKD-GEDDSGSASRGNWWQGSLYY 153
           P ++Q  G NS+ + D GEDDS  ASRG+WWQG LYY
Sbjct: 117 PQSTQNEGFNSMHRNDGGEDDSEFASRGDWWQGGLYY 153

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	153
TAIR|locus:2185168	149	SIS "AT5G02020" [Arabidopsis t	0.895	0.919	0.509	5.6e-29
TAIR|locus:2153286	135	AT5G59080 "AT5G59080" [Arabido	0.633	0.718	0.432	6.6e-21
TAIR|locus:1009023254	146	AT3G55646 "AT3G55646" [Arabido	0.411	0.431	0.536	4.2e-15
TAIR|locus:504954988	131	AT5G05965 "AT5G05965" [Arabido	0.490	0.572	0.415	2.9e-09
TAIR|locus:2102727	153	AT3G46880 "AT3G46880" [Arabido	0.385	0.385	0.415	2.6e-08
TAIR|locus:504955928	151	AT2G39855 "AT2G39855" [Arabido	0.300	0.304	0.469	6.6e-05
MGI|MGI:103566	665	Cd6 "CD6 antigen" [Mus musculu	0.653	0.150	0.271	0.0003

TAIR|locus:2185168 SIS "AT5G02020" [Arabidopsis thaliana (taxid:3702)]

 Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
 Identities = 84/165 (50%), Positives = 98/165 (59%)

Query:     1 MEGRKQTGSSSS------LTNELFGSKEXXXXXXXXXXXXXXX---XKVLGRESLHSESM 51
             MEGRK+  SSSS      LT+ELFGS+E                   KVLGRES+  E++
Sbjct:     1 MEGRKKKASSSSPCSSSSLTSELFGSRENPSSPSSSGILGSIFPPPSKVLGRESVRQETV 60

Query:    52 EKKHDSSKEAWNTKPT-TPGDASRSYET-ESQGTAYKDMSSMYQDQRVQPCHLSSSIYYG 109
                   +   WN K + T G+  R+ E  E+ G+ Y+      QDQRVQPCHLSSSIYYG
Sbjct:    61 ------TGGCWNEKTSKTGGNVDRNREQQENHGSGYQ------QDQRVQPCHLSSSIYYG 108

Query:   110 GQDVYSPRPPNSQGPGVNSVFKKDG-EDDSGSASRGNWWQGSLYY 153
             G DVY  +P NS     NS  KKDG EDDSGSASRGNWWQGSLYY
Sbjct:   109 GPDVYF-QPQNSTS---NSTNKKDGGEDDSGSASRGNWWQGSLYY 149

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0009651 "response to salt stress" evidence=IMP

GO:0006914 "autophagy" evidence=RCA

TAIR|locus:2153286 AT5G59080 "AT5G59080" [Arabidopsis thaliana (taxid:3702)]

 Score = 201 (75.8 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
 Identities = 45/104 (43%), Positives = 58/104 (55%)

Query:    57 SSKEAWNTKPTTPGDAS-RSYETESQGTAYKDMSSMY-QDQRVQPCHLSSSIYYGGQDVY 114
             SS   ++T    P   S R       G+  +   S+  Q+ RV+PCHLSSS+YYGGQDVY
Sbjct:    32 SSSGIFSTMFPHPSKGSARDGSNSKHGSQAQRRESLNAQEDRVEPCHLSSSLYYGGQDVY 91

Query:   115 SPRPPNSQGPGVNSVFKKDGEDDSGS-----ASRGNWWQGSLYY 153
             +    N   P V +  ++ GEDD+        SRGNWWQGSLYY
Sbjct:    92 ARSTTNQTYPPVKNDRRRSGEDDANGQNPQDVSRGNWWQGSLYY 135

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0006979 "response to oxidative stress" evidence=IMP

TAIR|locus:1009023254 AT3G55646 "AT3G55646" [Arabidopsis thaliana (taxid:3702)]

 Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
 Identities = 37/69 (53%), Positives = 46/69 (66%)

Query:    86 KDMSSMYQDQRVQPCHLSSSIYYGGQDVYSPRPPNSQGPGVNSVFKKDGED-DSGSASRG 144
             K+  S Y ++   PCHLSSS+YYGGQ+ YS     S     +  +KKDGE+ DS  ASRG
Sbjct:    83 KEKKSYYNEETEPPCHLSSSLYYGGQETYS-----STTTTTHDTYKKDGEEGDSKRASRG 137

Query:   145 NWWQGSLYY 153
             NWW+GSLYY
Sbjct:   138 NWWEGSLYY 146

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:504954988 AT5G05965 "AT5G05965" [Arabidopsis thaliana (taxid:3702)]

 Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 32/77 (41%), Positives = 39/77 (50%)

Query:    79 ESQGTAYKDMSSMYQDQRVQPCHLSSSIYYGGQDVYSP-RPPNSQ-GPGVNSVFKKDGED 136
             E QG   +        ++ +  + SSSIYYGGQ  YSP R   S   P        D  D
Sbjct:    55 EVQGNISQATDERSSHEKRESSYYSSSIYYGGQQHYSPPRTDGSSTSPSHQPKETNDRTD 114

Query:   137 DSGSASRGNWWQGSLYY 153
              + S SRGNWW+GSLYY
Sbjct:   115 ITTSTSRGNWWKGSLYY 131

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2102727 AT3G46880 "AT3G46880" [Arabidopsis thaliana (taxid:3702)]

 Score = 95 (38.5 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
 Identities = 27/65 (41%), Positives = 36/65 (55%)

Query:    66 PTTPGDASR--SYETESQGTAYKDMSSMYQ--DQRVQP--CHLSSSIYYGGQDVYSPRPP 119
             P  P  ++   S    S+GTA   +SS +   +QR +   C+LSSS+YYGGQDVYS    
Sbjct:    22 PKEPSSSANFNSIFPPSKGTARNILSSKHGSLEQRKEAGTCNLSSSLYYGGQDVYSHPTH 81

Query:   120 NSQGP 124
             N   P
Sbjct:    82 NHTYP 86

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:504955928 AT2G39855 "AT2G39855" [Arabidopsis thaliana (taxid:3702)]

 Score = 98 (39.6 bits), Expect = 6.6e-05, P = 6.6e-05
 Identities = 23/49 (46%), Positives = 30/49 (61%)

Query:    75 SYETESQ-GTAYKDMS-SMYQDQRVQP-CHLSSSIYYGGQDVYSPRPPN 120
             ++ET ++ G   K+     YQ +  QP C+LSSSIYYGGQD YS    N
Sbjct:    66 NFETPNERGERSKNKERKSYQSEETQPPCNLSSSIYYGGQDNYSSSTTN 114

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

MGI|MGI:103566 Cd6 "CD6 antigen" [Mus musculus (taxid:10090)]

 Score = 100 (40.3 bits), Expect = 0.00030, P = 0.00030
 Identities = 28/103 (27%), Positives = 43/103 (41%)

Query:    49 ESMEKKHDSSKEAWNTKPTTPGDASRS--YETESQGTAYKDMSSMY-QDQRVQPCHLSSS 105
             E +E+ H S   A + +P      SR   Y   +   +       Y  D   +P   +S 
Sbjct:   523 EGLEELHVSHIPAADPRPCVADVPSRGSQYHVRNNSDSSTSSEEGYCNDPSSKPPPWNSQ 582

Query:   106 IYYGGQDVYSPRPPNSQGPGVNSVFKKDGEDDSGSASRGNWWQ 148
              +Y  +   + +PPN +  G  +VF     DDS S S G W+Q
Sbjct:   583 AFYSEKSPLTEQPPNLELAGSPAVFSGPSADDSSSTSSGEWYQ 625


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.304   0.122   0.358    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      153       137   0.00091  102 3  11 23  0.44    32
                                                     30  0.45    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  573 (61 KB)
  Total size of DFA:  146 KB (2090 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.78u 0.10s 15.88t   Elapsed:  00:00:00
  Total cpu time:  15.79u 0.10s 15.89t   Elapsed:  00:00:00
  Start:  Thu May  9 23:08:13 2013   End:  Thu May  9 23:08:13 2013

GO:0001934 "positive regulation of protein phosphorylation" evidence=ISO

GO:0001948 "glycoprotein binding" evidence=ISO

GO:0005044 "scavenger receptor activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0007155 "cell adhesion" evidence=IEA

GO:0009986 "cell surface" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0019901 "protein kinase binding" evidence=ISO

GO:0044214 "fully spanning plasma membrane" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00