Citrus Sinensis ID: 031806

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150--
MSFQDLEAGVRVPPQNPFNAAKRKQQQQNQSQSQDPSQAVAAAIFQINTAVSSFYRLVNSLGTPKDTLDLRDKLHKTRLHIGQLVKDTSSKLKQASEADHHTEVSPIRKIADAKLAKDFQSVLKEFQKAQRLAAERETTYAPFVPKESLSSR
ccHHHHHccccccccccccccHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccc
MSFQD********************************QAVAAAIFQINTAVSSFYRLVNSLGTPKDTLDLRDKLHKTRLHIGQLVKDTSSKL*********************KLAKDFQSVLKEFQKA***********************
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MSFQDLEAGVRVPPQNPFNAAKRKQQQQNQSQSQDPSQAVAAAIFQINTAVSSFYRLVNSLGTPKDTLDLRDKLHKTRLHIGQLVKDTSSKLKQASEADHHTEVSPIRKIADAKLAKDFQSVLKEFQKAQRLAAERETTYAPFVPKESLSSR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Syntaxin-21 May function in the docking or fusion of transport vesicles with the prevacuolar membrane.probableQ39233

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2DNX, chain A
Confidence level:very confident
Coverage over the Query: 30-148
View the alignment between query and template
View the model in PyMOL