Citrus Sinensis ID: 031952

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
MSRRKTREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL
ccccccccccCEEEEccccccccccEEEEEEEEcccccEEEEEEcccccEEEEEEccccCECcccccccHHHHHHHHHHHHHHHHHccccEEEEEEEEccccccccccccHHHHHHHHHHcccEEEEEEEcccccccccccccccccccc
******************AVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV****DESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGN***TP*PGAQSALRALARSGMKIGRIEDVTPIPTDST***********
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MSRRKTREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
40S ribosomal protein S14-1 confidentQ9SIH0
40S ribosomal protein S14-3 confidentP42036
40S ribosomal protein S14-2 confidentQ9CAX6

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2XZM, chain K
Confidence level:very confident
Coverage over the Query: 12-139
View the alignment between query and template
View the model in PyMOL