Citrus Sinensis ID: 032068

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------15
Protein Sequence
MAMTSDETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQVAIVNNFENGKTIADLSYLGVMLCCFVIVGSLWESHRTLSSV
Secondary Structure (PSIPRED)
cccccccccccccccccccccccHHHHHHHcccccccccccccccccccHHHHHHcccccccccccHHHHHHHHHHccHHcccccccccccccccccccccHHHHHHHHccccccccccccHHHHccHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccccccEEcccccccccHHHEHHHHHHHHHHccccccccccccHHHHHHHHHHcccccccccccccccHHHHHHHHcccccccEEEEEccccEEcHHHHHHHHHHcccccccccEEEEHHHHHHHEHHEEEEccHHHcccccccc
Coil and Loop (DISEMBL)
mamtsdettkicshcdraipssnidlhfahcsrnlerckvcgdmvprkyaeehflnthapvacsqcsETMEREILAIhkgencpqrivtcdfcefplpavdlaEHQVAIVNNfengktiaDLSYLGVMLCCFVIVGSLWESHRTLSSV
Flexible Loop (DISEMBL)
MAMTSDETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQVAIVNNFENGKTIADLSYLGVMLCCFVIVGSLWEshrtlssv
Low Complexity Region (SEG)
MAMTSDETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQVAIVNNFENGKTIADLSYLGVMLCCFVIVGSLWESHRTLSSV
Disordered region (IsUnstruct)
**********ICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQVAIVNNFENGKTIADLSYLGVMLCCFVIVGSLWE********
Disordered Region (DISOPRED)
*****DE***ICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQVAIVNNFENGKTIADLSYLGVMLCCFVIVGSLWESHRTLS**
Disordered Region (DISEMBL)
**********ICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQVAIVNNFENGKTIADLSYLGVMLCCFVIVGSLWESHRTLSSV
Disordered Region (DISPRO)
*******TTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQVAIVNNFENGKTIADLSYLGVMLCCFVIVGSLWE********
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAMTSDETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQVAIVNNFENGKTIADLSYLGVMLCCFVIVGSLWESHRTLSSV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	148	2.2.26 [Sep-21-2011]
Q3UDK1	580	TRAF-type zinc finger dom	yes	no	0.675	0.172	0.326	2e-11
Q6GPH4	301	XIAP-associated factor 1	yes	no	0.547	0.269	0.354	2e-11
Q58D05	580	TRAF-type zinc finger dom	yes	no	0.682	0.174	0.323	3e-11
Q99MM4	576	TRAF-type zinc finger dom	yes	no	0.675	0.173	0.326	4e-11
Q4R970	582	TRAF-type zinc finger dom	N/A	no	0.675	0.171	0.326	7e-10
Q58DH1	297	XIAP-associated factor 1	no	no	0.648	0.323	0.346	1e-09
O14545	582	TRAF-type zinc finger dom	no	no	0.675	0.171	0.326	2e-09
Q54C11	437	TNF receptor-associated f	yes	no	0.662	0.224	0.271	0.0002
Q55A66	1084	TNF receptor-associated f	no	no	0.655	0.089	0.240	0.0003
Q5NBU8	273	XIAP-associated factor 1	no	no	0.891	0.483	0.253	0.0007

>sp|Q3UDK1|TRAD1_MOUSE TRAF-type zinc finger domain-containing protein 1 OS=Mus musculus GN=Trafd1 PE=1 SV=1

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 1/101 (0%)

Query: 6   DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQ 65
           D+ +++C +C + IP  N  +H  HC RN+  C VC +  P+   + H    H  V C +
Sbjct: 7   DQASRLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKSDMDIHMAAEHCQVTC-K 65

Query: 66  CSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 106
           C++ +E+  L  H    CP R+  C  C+  L  V L EH+
Sbjct: 66  CNKKLEKRQLKQHAETECPLRLAVCQHCDLELSVVKLKEHE 106

Negative feedback regulator that controls excessive innate immune responses. Regulates both Toll-like receptor 4 (TLR4) and DDX58/RIG1-like helicases (RLH) pathways. May inhibit the LTR pathway by direct interaction with TRAF6 and attenuation of NF-kappa-B activation. May negatively regulate the RLH pathway downstream from MAVS and upstream of NF-kappa-B and IRF3.
Mus musculus (taxid: 10090)

>sp|Q6GPH4|XAF1_HUMAN XIAP-associated factor 1 OS=Homo sapiens GN=XAF1 PE=1 SV=1

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 51/96 (53%)

Query: 11  ICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETM 70
           +C +C R + S+N  LH A+C R L  C  C + VP++  EEH    H  V C+ C ++M
Sbjct: 7   VCRNCKRHVVSANFTLHEAYCLRFLVLCPECEEPVPKETMEEHCKLEHQQVGCTMCQQSM 66

Query: 71  EREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 106
           ++  L  HK   C +R V C FC+  +    L  H+
Sbjct: 67  QKSSLEFHKANECQERPVECKFCKLDMQLSKLELHE 102

Seems to function as a negative regulator of members of the IAP (inhibitor of apoptosis protein) family. Inhibits anti-caspase activity of BIRC4. Induces cleavage and inactivation of BIRC4 independent of caspase activation. Mediates TNF-alpha-induced apoptosis and is involved in apoptosis in trophoblast cells. May inhibit BIRC4 indirectly by activating the mitochondrial apoptosis pathway. After translocation to mitochondra, promotes translocation of BAX to mitochondria and cytochrome c release from mitochondria. Seems to promote the redistribution of BIRC4 from the cytoplasm to the nucleus, probably independent of BIRC4 inactivation which seems to occur in the cytoplasm. The BIRC4-XAF1 complex mediates down-regulation of BIRC5/survivin; the process requires the E3 ligase activity of BIRC4. Seems to be involved in cellular sensitivity to the proapoptotic actions of TRAIL. May be a tumor suppressor by mediating apoptosis resistance of cancer cells.

Homo sapiens (taxid: 9606)

>sp|Q58D05|TRAD1_BOVIN TRAF-type zinc finger domain-containing protein 1 OS=Bos taurus GN=TRAFD1 PE=2 SV=1

 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 1/102 (0%)

Query: 5   SDETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACS 64
           +D+ T++C +C + IP  N  +H  HC RN+  C VC +  P+   E H    H  V C 
Sbjct: 6   NDQDTRLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKCDMETHMATEHCQVTC- 64

Query: 65  QCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 106
           +C++ +E+  L  H+   CP R+  C  C+  L  + L +H+
Sbjct: 65  KCNKKLEKRQLKKHEETECPLRLALCQHCDLELSVLKLKDHE 106

Negative feedback regulator that controls excessive innate immune responses. Regulates both Toll-like receptor 4 (TLR4) and DDX58/RIG1-like helicases (RLH) pathways. May inhibit the LTR pathway by direct interaction with TRAF6 and attenuation of NF-kappa-B activation. May negatively regulate the RLH pathway downstream from MAVS and upstream of NF-kappa-B and IRF3.

Bos taurus (taxid: 9913)

>sp|Q99MM4|TRAD1_RAT TRAF-type zinc finger domain-containing protein 1 OS=Rattus norvegicus GN=Trafd1 PE=2 SV=2

 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 1/101 (0%)

Query: 6   DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQ 65
           D+  ++C +C + IP  N  +H  HC RN+  C VC +  P+   + H    H  V C +
Sbjct: 7   DQAARLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKSDMDIHVATEHCQVTC-K 65

Query: 66  CSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 106
           C++ +E+  L  H    CP R+  C  C+  L  V L EH+
Sbjct: 66  CNKKLEKRQLKQHVETECPLRLAVCQHCDLELSVVKLKEHE 106

Negative feedback regulator that controls excessive innate immune responses. Regulates both Toll-like receptor 4 (TLR4) and DDX58/RIG1-like helicases (RLH) pathways. May inhibit the LTR pathway by direct interaction with TRAF6 and attenuation of NF-kappa-B activation. May negatively regulate the RLH pathway downstream from MAVS and upstream of NF-kappa-B and IRF3.

Rattus norvegicus (taxid: 10116)

>sp|Q4R970|TRAD1_MACFA TRAF-type zinc finger domain-containing protein 1 OS=Macaca fascicularis GN=TRAFD1 PE=2 SV=1

 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 1/101 (0%)

Query: 6   DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQ 65
           D+ T++C +C + IP  N  +H  HC RN+  C +C +  P+   E H    H  V C +
Sbjct: 7   DQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPICKEPFPKSDMETHMAAEHCQVTC-K 65

Query: 66  CSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 106
           C++ +E+ +L  H+   CP R+  C  C+  L  + L EH+
Sbjct: 66  CNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHE 106

Negative feedback regulator that controls excessive innate immune responses. Regulates both Toll-like receptor 4 (TLR4) and DDX58/RIG1-like helicases (RLH) pathways. May inhibit the LTR pathway by direct interaction with TRAF6 and attenuation of NF-kappa-B activation. May negatively regulate the RLH pathway downstream from MAVS and upstream of NF-kappa-B and IRF3.

Macaca fascicularis (taxid: 9541)

>sp|Q58DH1|XAF1_BOVIN XIAP-associated factor 1 OS=Bos taurus GN=XAF1 PE=2 SV=2

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 2/98 (2%)

Query: 10  KICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSET 69
           ++C +C R + S+++ LH AHC   L  C  C + V +   EEH    H  V C+ C ++
Sbjct: 6   QVCRNCKRRVASNHLGLHEAHCLMYLVLCPECKEPVLQHEMEEHCQGGHQQVGCAMCQQS 65

Query: 70  MEREILAIHKGENCPQRIVTCDFCEFP--LPAVDLAEH 105
           + +  L  H+ + C +R V C FC+    L  VDL EH
Sbjct: 66  VPKHSLDSHEAQECQERPVECQFCQLAVRLNKVDLHEH 103

Seems to function as a negative regulator of members of the IAP (inhibitor of apoptosis protein) family. Inhibits anti-caspase activity of BIRC4. Induces cleavage and inactivation of BIRC4 independent of caspase activation. Mediates TNF-alpha-induced apoptosis and is involved in apoptosis in trophoblast cells. May inhibit BIRC4 indirectly by activating the mitochondrial apoptosis pathway. After translocation to mitochondra, promotes translocation of BAX to mitochondria and cytochrome c release from mitochondria. Seems to promote the redistribution of BIRC4 from the cytoplasm to the nucleus, probably independent of BIRC4 inactivation which seems to occur in the cytoplasm. The BIRC4-XAF1 complex mediates down-regulation of BIRC5/survivin; the process requires the E3 ligase activity of BIRC4. Seems to be involved in cellular sensitivity to the proapoptotic actions of TRAIL. May be a tumor suppressor by mediating apoptosis resistance of cancer cells.

Bos taurus (taxid: 9913)

>sp|O14545|TRAD1_HUMAN TRAF-type zinc finger domain-containing protein 1 OS=Homo sapiens GN=TRAFD1 PE=1 SV=1

 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 1/101 (0%)

Query: 6   DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQ 65
           D+ T++C +C + IP  N  +H  HC RN+  C  C +  P+   E H    H  V C +
Sbjct: 7   DQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHCQVTC-K 65

Query: 66  CSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 106
           C++ +E+ +L  H+   CP R+  C  C+  L  + L EH+
Sbjct: 66  CNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHE 106

Negative feedback regulator that controls excessive innate immune responses. Regulates both Toll-like receptor 4 (TLR4) and DDX58/RIG1-like helicases (RLH) pathways. May inhibit the LTR pathway by direct interaction with TRAF6 and attenuation of NF-kappa-B activation. May negatively regulate the RLH pathway downstream from MAVS and upstream of NF-kappa-B and IRF3.

Homo sapiens (taxid: 9606)

>sp|Q54C11|Y3202_DICDI TNF receptor-associated factor family protein DDB_G0293202 OS=Dictyostelium discoideum GN=DDB_G0293202 PE=2 SV=1

 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 5/103 (4%)

Query: 23  NIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNT--HAPVACSQCSETMEREILAIHKG 80
           N+D H   C   LE C  C + + RK  EEH         + C +C  T+ER  +  H  
Sbjct: 153 NLDQHLQTCGFQLEDCPNCNNKIIRKSIEEHIDEECLKTKIKCLECGSTVERGDMDFHLD 212

Query: 81  ENCPQRIVTCDFCEFPLPAVDLAEHQVAIVNNFENGKTIADLS 123
             CP  ++ C  C+      DL   +  + N+ ++ + I++L+
Sbjct: 213 NVCPNIVIPCILCD---NGCDLLFKRSELSNHLQSIEHISNLN 252

Probable adapter protein and signal transducer that links members of the tumor necrosis factor receptor family to different signaling pathways by association with the receptor cytoplasmic domain and kinases.

Dictyostelium discoideum (taxid: 44689)

>sp|Q55A66|Y2098_DICDI TNF receptor-associated factor family protein DDB_G0272098 OS=Dictyostelium discoideum GN=DDB_G0272098 PE=3 SV=1

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 7/104 (6%)

Query: 10  KICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLN--THAPVACSQCS 67
           K+   C + I  S +D H   C      C+ C +++ R   E H     +  P+ C  C 
Sbjct: 150 KLLKRCGK-INKSLLDEHDEQCLYQTITCEHCNELINRIDHEIHLSEWCSDIPIKCEDCK 208

Query: 68  ETMEREILAIHKGENCPQRIVTCDF----CEFPLPAVDLAEHQV 107
              +++ +  HK  NCP+ ++ C +    C+  L   ++++H V
Sbjct: 209 HVFKKKYIQEHKESNCPESVIDCVYVAGGCQKKLKRYNMSKHLV 252

Probable adapter protein and signal transducer that links members of the tumor necrosis factor receptor family to different signaling pathways by association with the receptor cytoplasmic domain and kinases.

Dictyostelium discoideum (taxid: 44689)

>sp|Q5NBU8|XAF1_MOUSE XIAP-associated factor 1 OS=Mus musculus GN=Xaf1 PE=2 SV=3

 Score = 43.1 bits (100), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 14/146 (9%)

Query: 10  KICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHA--------PV 61
           ++C +C R + S +  LH AHC R +  C  C + +P    +EH    H         P 
Sbjct: 6   QVCRNCKRNVASLHFMLHEAHCLRFIVLCPECEEPIPESKMKEHMEVVHQQTKESQQHPA 65

Query: 62  ACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ---VAIVNNFENGKT 118
            C  C   ++   L +H+  +C  R   C  C  P+    L++H+   ++     E GK 
Sbjct: 66  KCKFCELAVQLSNLDVHES-HCGSRTEHCPHCNQPITLQVLSQHKAMCLSAKGRPEEGKR 124

Query: 119 IADLSYLGVM--LCCFVIVGSLWESH 142
           I           LC  +I  + + SH
Sbjct: 125 IVSSPGRKTRCDLCKQMIPENTYASH 150

Seems to function as a negative regulator of members of the IAP (inhibitor of apoptosis protein) family. Inhibits anti-caspase activity of BIRC4. Induces cleavage and inactivation of BIRC4 independent of caspase activation. Mediates TNF-alpha-induced apoptosis and is involved in apoptosis in trophoblast cells. May inhibit BIRC4 indirectly by activating the mitochondrial apoptosis pathway. After translocation to mitochondra, promotes translocation of BAX to mitochondria and cytochrome c release from mitochondria. Seems to promote the redistribution of BIRC4 from the cytoplasm to the nucleus, probably independent of BIRC4 inactivation which seems to occur in the cytoplasm. The BIRC4-XAF1 complex mediates down-regulation of BIRC5/survivin; the process requires the E3 ligase activity of BIRC4. Seems to be involved in cellular sensitivity to the proapoptotic actions of TRAIL. May be a tumor suppressor by mediating apoptosis resistance of cancer cells.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	148
224063359	201	predicted protein [Populus trichocarpa]	0.770	0.567	0.815	5e-50
302142097	261	unnamed protein product [Vitis vinifera]	0.770	0.436	0.780	2e-48
225459028	212	PREDICTED: XIAP-associated factor 1-like	0.770	0.537	0.780	3e-48
302142096	206	unnamed protein product [Vitis vinifera]	0.770	0.553	0.763	6e-47
225459034	207	PREDICTED: XIAP-associated factor 1-like	0.770	0.550	0.763	6e-47
449436936	207	PREDICTED: XIAP-associated factor 1-like	0.770	0.550	0.771	7e-47
363808284	166	uncharacterized protein LOC100811867 [Gl	0.770	0.686	0.754	5e-46
351726652	152	uncharacterized protein LOC100527695 [Gl	0.770	0.75	0.754	8e-46
255572838	199	nucleic acid binding protein, putative [	0.770	0.572	0.754	1e-45
388499446	203	unknown [Lotus japonicus]	0.770	0.561	0.736	2e-45

>gi|224063359|ref|XP_002301111.1| predicted protein [Populus trichocarpa] gi|222842837|gb|EEE80384.1| predicted protein [Populus trichocarpa]

 Score =  202 bits (513), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 93/114 (81%), Positives = 104/114 (91%)

Query: 1   MAMTSDETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAP 60
           MA+ S+E+T ICSHCDRAIPSSNIDLH+AHC RNL++CK+CGDMVP+K+AEEHFLNTHAP
Sbjct: 1   MAVASEESTSICSHCDRAIPSSNIDLHYAHCFRNLKKCKICGDMVPKKHAEEHFLNTHAP 60

Query: 61  VACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQVAIVNNFE 114
           VACS CSETMEREILA+HKGENCPQRIVTC+FCEFPLPAVDLAEHQ    N  E
Sbjct: 61  VACSLCSETMEREILAVHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTE 114

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142097|emb|CBI19300.3| unnamed protein product [Vitis vinifera]

 Score =  196 bits (499), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 89/114 (78%), Positives = 103/114 (90%)

Query: 1   MAMTSDETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAP 60
           MA+ S+E+T ICSHCD+AIPS+NIDLH+AHCSRNLERCK CGDMVP+K+AEEH+LNTHA 
Sbjct: 50  MAIASNESTSICSHCDKAIPSTNIDLHYAHCSRNLERCKHCGDMVPKKHAEEHYLNTHAA 109

Query: 61  VACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQVAIVNNFE 114
           V+CS CSETMEREILA+HKGENCPQRIVTC+FCEFPLPA+DL+EHQ    N  E
Sbjct: 110 VSCSLCSETMEREILAVHKGENCPQRIVTCEFCEFPLPAIDLSEHQEVCGNRTE 163

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459028|ref|XP_002285617.1| PREDICTED: XIAP-associated factor 1-like isoform 1 [Vitis vinifera]

 Score =  196 bits (497), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 89/114 (78%), Positives = 103/114 (90%)

Query: 1   MAMTSDETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAP 60
           MA+ S+E+T ICSHCD+AIPS+NIDLH+AHCSRNLERCK CGDMVP+K+AEEH+LNTHA 
Sbjct: 1   MAIASNESTSICSHCDKAIPSTNIDLHYAHCSRNLERCKHCGDMVPKKHAEEHYLNTHAA 60

Query: 61  VACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQVAIVNNFE 114
           V+CS CSETMEREILA+HKGENCPQRIVTC+FCEFPLPA+DL+EHQ    N  E
Sbjct: 61  VSCSLCSETMEREILAVHKGENCPQRIVTCEFCEFPLPAIDLSEHQEVCGNRTE 114

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142096|emb|CBI19299.3| unnamed protein product [Vitis vinifera]

 Score =  191 bits (486), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 87/114 (76%), Positives = 100/114 (87%)

Query: 1   MAMTSDETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAP 60
           MA  S+E T ICSHCDR+IPS+NIDLH+ HCSRNLERCK CGDMVP+K+AEEH+LNTHA 
Sbjct: 1   MATASNEATSICSHCDRSIPSTNIDLHYVHCSRNLERCKHCGDMVPKKHAEEHYLNTHAS 60

Query: 61  VACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQVAIVNNFE 114
           V+CS CSETMEREILA+H+GENCPQRIVTC+FCEFPLPA+DL+EHQ    N  E
Sbjct: 61  VSCSLCSETMEREILAVHRGENCPQRIVTCEFCEFPLPAIDLSEHQEVCGNRTE 114

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459034|ref|XP_002285623.1| PREDICTED: XIAP-associated factor 1-like [Vitis vinifera]

 Score =  191 bits (486), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 87/114 (76%), Positives = 100/114 (87%)

Query: 1   MAMTSDETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAP 60
           MA  S+E T ICSHCDR+IPS+NIDLH+ HCSRNLERCK CGDMVP+K+AEEH+LNTHA 
Sbjct: 1   MATASNEATSICSHCDRSIPSTNIDLHYVHCSRNLERCKHCGDMVPKKHAEEHYLNTHAS 60

Query: 61  VACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQVAIVNNFE 114
           V+CS CSETMEREILA+H+GENCPQRIVTC+FCEFPLPA+DL+EHQ    N  E
Sbjct: 61  VSCSLCSETMEREILAVHRGENCPQRIVTCEFCEFPLPAIDLSEHQEVCGNRTE 114

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449436936|ref|XP_004136248.1| PREDICTED: XIAP-associated factor 1-like isoform 1 [Cucumis sativus] gi|449436938|ref|XP_004136249.1| PREDICTED: XIAP-associated factor 1-like isoform 2 [Cucumis sativus] gi|449521888|ref|XP_004167961.1| PREDICTED: XIAP-associated factor 1-like isoform 1 [Cucumis sativus] gi|449521890|ref|XP_004167962.1| PREDICTED: XIAP-associated factor 1-like isoform 2 [Cucumis sativus]

 Score =  191 bits (486), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 88/114 (77%), Positives = 101/114 (88%)

Query: 1   MAMTSDETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAP 60
           MA+ S+ETT IC+HC R IPSSNIDLH  HC+RNLE+CK+CGDMVP+++AEEHFLNTHAP
Sbjct: 1   MAVASEETTSICNHCGRDIPSSNIDLHSVHCARNLEKCKICGDMVPKRHAEEHFLNTHAP 60

Query: 61  VACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQVAIVNNFE 114
           V+CS CSETMER+ILAIHKGENCPQRIVTC+FCEFPLPA+DLAEHQ    N  E
Sbjct: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTE 114

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363808284|ref|NP_001242241.1| uncharacterized protein LOC100811867 [Glycine max] gi|255633654|gb|ACU17186.1| unknown [Glycine max]

 Score =  188 bits (478), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 86/114 (75%), Positives = 98/114 (85%)

Query: 1   MAMTSDETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAP 60
           M   SD+ T IC+HCDRAIP++NIDLH+AHCSR LE+CKVCGDMVPRK AE+H+L+THAP
Sbjct: 1   MEAVSDQDTSICTHCDRAIPAANIDLHYAHCSRKLEKCKVCGDMVPRKNAEDHYLSTHAP 60

Query: 61  VACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQVAIVNNFE 114
           V+CS CSETMER+IL IHKGENCPQRIVTC FCEFPLPA+DLAEHQ    N  E
Sbjct: 61  VSCSLCSETMERDILDIHKGENCPQRIVTCQFCEFPLPAIDLAEHQEVCGNRTE 114

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726652|ref|NP_001236110.1| uncharacterized protein LOC100527695 [Glycine max] gi|255632972|gb|ACU16840.1| unknown [Glycine max]

 Score =  187 bits (476), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 86/114 (75%), Positives = 98/114 (85%)

Query: 1   MAMTSDETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAP 60
           M   SD+ T IC+HCDRAIP++NIDLH+AHCSR LE+CKVCGDMVPRK AE+H+L THAP
Sbjct: 1   MEAVSDQDTSICTHCDRAIPAANIDLHYAHCSRKLEKCKVCGDMVPRKNAEDHYLRTHAP 60

Query: 61  VACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQVAIVNNFE 114
           V+CS CSETMER+IL IHKGENCPQRIVTC+FCEFPLPA+DLAEHQ    N  E
Sbjct: 61  VSCSLCSETMERDILDIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTE 114

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255572838|ref|XP_002527351.1| nucleic acid binding protein, putative [Ricinus communis] gi|223533270|gb|EEF35023.1| nucleic acid binding protein, putative [Ricinus communis]

 Score =  187 bits (475), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 86/114 (75%), Positives = 99/114 (86%)

Query: 1   MAMTSDETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAP 60
           MA+ S+ETT +C+HC+RAIPS N DLH  HCSRNLE+CKVCGDM+P+K+ +EHF NTHAP
Sbjct: 1   MAVASEETTTMCNHCNRAIPSLNYDLHSVHCSRNLEKCKVCGDMIPKKHYDEHFSNTHAP 60

Query: 61  VACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQVAIVNNFE 114
           VACS CSETMERE+LAIHKGENCPQRIVTC+FCEFPLPA+DLAEHQ    N  E
Sbjct: 61  VACSLCSETMEREVLAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTE 114

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388499446|gb|AFK37789.1| unknown [Lotus japonicus]

 Score =  187 bits (474), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 84/114 (73%), Positives = 99/114 (86%)

Query: 1   MAMTSDETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAP 60
           M   SD+ T +C+HCDRAIP++NIDLH  HC+RNLE+CKVCGDMVPRK+AE+H+L+THAP
Sbjct: 1   MEAGSDQATSVCTHCDRAIPAANIDLHSVHCARNLEKCKVCGDMVPRKHAEDHYLSTHAP 60

Query: 61  VACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQVAIVNNFE 114
           V+CS CSETM+R+IL IHKGENCPQRIVTC+FCEFPLPAVDLAEHQ    N  E
Sbjct: 61  VSCSLCSETMQRDILDIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTE 114

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	148
TAIR|locus:2024351	192	AT1G09920 [Arabidopsis thalian	0.770	0.593	0.692	2.8e-43
ZFIN|ZDB-GENE-060929-840	273	zgc:153893 "zgc:153893" [Danio	0.716	0.388	0.396	2.1e-20
UNIPROTKB|B4DI89	164	TRAFD1 "TRAF-type zinc finger	0.675	0.609	0.326	1.4e-16
UNIPROTKB|F8VNX8	283	TRAFD1 "TRAF-type zinc finger	0.675	0.353	0.326	1.4e-16
UNIPROTKB|F8VVF3	135	TRAFD1 "TRAF-type zinc finger	0.675	0.740	0.326	1.4e-16
UNIPROTKB|E1BQZ6	563	TRAFD1 "Uncharacterized protei	0.709	0.186	0.349	1.6e-16
UNIPROTKB|Q4R970	582	TRAFD1 "TRAF-type zinc finger	0.675	0.171	0.326	6e-16
UNIPROTKB|O14545	582	TRAFD1 "TRAF-type zinc finger	0.675	0.171	0.326	1.3e-15
UNIPROTKB|E2RS24	583	TRAFD1 "Uncharacterized protei	0.675	0.171	0.326	2.1e-15
UNIPROTKB|C9J7Z8	164	XAF1 "XIAP-associated factor 1	0.648	0.585	0.354	3.3e-15

TAIR|locus:2024351 AT1G09920 [Arabidopsis thaliana (taxid:3702)]

 Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
 Identities = 79/114 (69%), Positives = 92/114 (80%)

Query:     1 MAMTSDETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAP 60
             M   + E T +C+HCDR IPS NIDLH  HC+RNLE+CK+CGDMVP+K+AEEH+LNTHAP
Sbjct:     1 METATGEITIVCNHCDRDIPSLNIDLHRVHCARNLEKCKICGDMVPKKHAEEHYLNTHAP 60

Query:    61 VACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQVAIVNNFE 114
             +ACS C ET+EREI   HKGE CP+RIVTC+FCEFPLPAVDLAEHQ    N  E
Sbjct:    61 IACSMCKETIEREIFDSHKGEICPKRIVTCEFCEFPLPAVDLAEHQEVCGNRTE 114

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0016192 "vesicle-mediated transport" evidence=RCA

ZFIN|ZDB-GENE-060929-840 zgc:153893 "zgc:153893" [Danio rerio (taxid:7955)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 42/106 (39%), Positives = 59/106 (55%)

Query:     3 MTSDETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVA 62
             M ++E   +C+HC++ +  +N DLH  HC R L +C  C D V R   EEH    HA V 
Sbjct:     1 MDTEEELVLCTHCNKDVAKANFDLHEPHCKRFLCKCPDCNDTVHRDQLEEHKTEQHAEVK 60

Query:    63 CSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQVA 108
             C +C + MER  L  H+   CP+R   C+FC+  LP   L  H+V+
Sbjct:    61 CKKCKKKMERRHLLDHENNECPERFEICEFCQLELPLSTLKVHKVS 106

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|B4DI89 TRAFD1 "TRAF-type zinc finger domain-containing protein 1" [Homo sapiens (taxid:9606)]

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 33/101 (32%), Positives = 53/101 (52%)

Query:     6 DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQ 65
             D+ T++C +C + IP  N  +H  HC RN+  C  C +  P+   E H    H  V C +
Sbjct:     7 DQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHCQVTC-K 65

Query:    66 CSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 106
             C++ +E+ +L  H+   CP R+  C  C+  L  + L EH+
Sbjct:    66 CNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHE 106

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F8VNX8 TRAFD1 "TRAF-type zinc finger domain-containing protein 1" [Homo sapiens (taxid:9606)]

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 33/101 (32%), Positives = 53/101 (52%)

Query:     6 DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQ 65
             D+ T++C +C + IP  N  +H  HC RN+  C  C +  P+   E H    H  V C +
Sbjct:     7 DQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHCQVTC-K 65

Query:    66 CSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 106
             C++ +E+ +L  H+   CP R+  C  C+  L  + L EH+
Sbjct:    66 CNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHE 106

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0034097 "response to cytokine stimulus" evidence=IEA

GO:0045824 "negative regulation of innate immune response" evidence=IEA

UNIPROTKB|F8VVF3 TRAFD1 "TRAF-type zinc finger domain-containing protein 1" [Homo sapiens (taxid:9606)]

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 33/101 (32%), Positives = 53/101 (52%)

Query:     6 DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQ 65
             D+ T++C +C + IP  N  +H  HC RN+  C  C +  P+   E H    H  V C +
Sbjct:     7 DQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHCQVTC-K 65

Query:    66 CSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 106
             C++ +E+ +L  H+   CP R+  C  C+  L  + L EH+
Sbjct:    66 CNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHE 106

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0034097 "response to cytokine stimulus" evidence=IEA

GO:0045824 "negative regulation of innate immune response" evidence=IEA

UNIPROTKB|E1BQZ6 TRAFD1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 213 (80.0 bits), Expect = 1.6e-16, P = 1.6e-16
 Identities = 37/106 (34%), Positives = 59/106 (55%)

Query:     1 MAMTSDETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAP 60
             MA  ++  T++C +C + IP++N  +H  HCSRNLE C+ C + VP+   + H  + H  
Sbjct:     1 MAAVTEVQTQLCGNCKKDIPAANFTIHEIHCSRNLEVCRYCKESVPKSEMKNHIESEHVQ 60

Query:    61 VACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 106
             V C +CS  +E+ +L  H+   CP R   C  C+  L    L +H+
Sbjct:    61 VTC-KCSMKVEKSLLEDHETSACPLRPAVCQHCDIQLTFNKLQDHE 105

GO:0045824 "negative regulation of innate immune response" evidence=IEA

UNIPROTKB|Q4R970 TRAFD1 "TRAF-type zinc finger domain-containing protein 1" [Macaca fascicularis (taxid:9541)]

 Score = 208 (78.3 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 33/101 (32%), Positives = 54/101 (53%)

Query:     6 DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQ 65
             D+ T++C +C + IP  N  +H  HC RN+  C +C +  P+   E H    H  V C +
Sbjct:     7 DQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPICKEPFPKSDMETHMAAEHCQVTC-K 65

Query:    66 CSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 106
             C++ +E+ +L  H+   CP R+  C  C+  L  + L EH+
Sbjct:    66 CNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHE 106

GO:0045824 "negative regulation of innate immune response" evidence=ISS

UNIPROTKB|O14545 TRAFD1 "TRAF-type zinc finger domain-containing protein 1" [Homo sapiens (taxid:9606)]

 Score = 205 (77.2 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 33/101 (32%), Positives = 53/101 (52%)

Query:     6 DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQ 65
             D+ T++C +C + IP  N  +H  HC RN+  C  C +  P+   E H    H  V C +
Sbjct:     7 DQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHCQVTC-K 65

Query:    66 CSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 106
             C++ +E+ +L  H+   CP R+  C  C+  L  + L EH+
Sbjct:    66 CNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHE 106

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0034097 "response to cytokine stimulus" evidence=IEA

GO:0045824 "negative regulation of innate immune response" evidence=ISS

UNIPROTKB|E2RS24 TRAFD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 203 (76.5 bits), Expect = 2.1e-15, P = 2.1e-15
 Identities = 33/101 (32%), Positives = 53/101 (52%)

Query:     6 DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQ 65
             D+ T++C +C + IP  N  +H  HC RN+  C VC +  P+   E H    H  V C +
Sbjct:     7 DQDTQLCDNCKKEIPVFNFTIHEIHCQRNIGMCPVCKEPFPKSDMESHMATEHCQVTC-K 65

Query:    66 CSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 106
             C++ +E+  L  H+   CP R+  C  C+  L  + L +H+
Sbjct:    66 CNKKLEKRQLKKHEETECPLRLALCQHCDLELSVLKLKDHE 106

GO:0045824 "negative regulation of innate immune response" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|C9J7Z8 XAF1 "XIAP-associated factor 1" [Homo sapiens (taxid:9606)]

 Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
 Identities = 34/96 (35%), Positives = 51/96 (53%)

Query:    11 ICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETM 70
             +C +C R + S+N  LH A+C R L  C  C + VP++  EEH    H  V C+ C ++M
Sbjct:     7 VCRNCKRHVVSANFTLHEAYCLRFLVLCPECEEPVPKETMEEHCKLEHQQVGCTMCQQSM 66

Query:    71 EREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 106
             ++  L  HK   C +R V C FC+  +    L  H+
Sbjct:    67 QKSSLEFHKANECQERPVECKFCKLDMQLSKLELHE 102

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0003096203 hypothetical protein (201 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	148
PLN03086	567	PLN03086, PLN03086, PRLI-interacting factor K; Pro	8e-12

>gnl|CDD|178635 PLN03086, PLN03086, PRLI-interacting factor K; Provisional

 Score = 61.4 bits (149), Expect = 8e-12
 Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 21/108 (19%)

Query: 6   DETTKICSHCDRAIPSSNIDLHFAHCSR--------------------NLERCKVCGDMV 45
           D  T  C +C   IPS +I LH A+CSR                    N   C+ CG   
Sbjct: 404 DVDTVECRNCKHYIPSRSIALHEAYCSRHNVVCPHDGCGIVLRVEEAKNHVHCEKCGQAF 463

Query: 46  PRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDFC 93
            +   E+H    H P+ C  C   +E+E +  H+   CP R++TC FC
Sbjct: 464 QQGEMEKHMKVFHEPLQCP-CGVVLEKEQMVQHQASTCPLRLITCRFC 510

Length = 567

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	148
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.87
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.78
PLN03086	567	PRLI-interacting factor K; Provisional	99.44
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.37
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.32
KOG3608	467	consensus Zn finger proteins [General function pre	99.26
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.26
KOG3608	467	consensus Zn finger proteins [General function pre	99.2
KOG3576	267	consensus Ovo and related transcription factors [T	99.2
KOG3576	267	consensus Ovo and related transcription factors [T	99.12
PLN03086	567	PRLI-interacting factor K; Provisional	99.06
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.95
PHA02768	55	hypothetical protein; Provisional	98.67
PHA00733	128	hypothetical protein	98.57
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.49
PHA00733	128	hypothetical protein	98.22
PHA02768	55	hypothetical protein; Provisional	98.21
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.09
PHA00616	44	hypothetical protein	98.02
PHA00616	44	hypothetical protein	97.7
PHA00732	79	hypothetical protein	97.67
PHA00732	79	hypothetical protein	97.59
KOG3993	500	consensus Transcription factor (contains Zn finger	97.53
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.42
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.4
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.2
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	96.92
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	96.83
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.67
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.52
KOG3993	500	consensus Transcription factor (contains Zn finger	96.44
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.21
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	95.87
PRK04860	160	hypothetical protein; Provisional	95.8
smart00355	26	ZnF_C2H2 zinc finger.	95.69
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	95.68
PF02176	60	zf-TRAF: TRAF-type zinc finger; PDB: 2EOD_A 2YUC_A	95.58
PF02176	60	zf-TRAF: TRAF-type zinc finger; PDB: 2EOD_A 2YUC_A	95.43
PRK04860	160	hypothetical protein; Provisional	94.48
COG5189	423	SFP1 Putative transcriptional repressor regulating	94.39
COG5189	423	SFP1 Putative transcriptional repressor regulating	94.37
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	94.21
KOG2186	276	consensus Cell growth-regulating nucleolar protein	93.9
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	93.79
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	93.38
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	93.36
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	92.9
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	92.83
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	91.58
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	91.17
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	90.98
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	88.97
KOG2186	276	consensus Cell growth-regulating nucleolar protein	88.65
PF08209	33	Sgf11: Sgf11 (transcriptional regulation protein);	87.77
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	86.38
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	81.57
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	81.49
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	81.03
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	80.98
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	80.27

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.87  E-value=3.8e-23  Score=141.67  Aligned_cols=116  Identities=23%  Similarity=0.443  Sum_probs=102.7

Q ss_pred             CCcccCCCCCCCCC-cchHHHH-HhhcC---CCCccccccCCccChh-hHHHHHHcCCC-CccCccchhccch-HHHHhh
Q 032068            7 ETTKICSHCDRAIP-SSNIDLH-FAHCS---RNLERCKVCGDMVPRK-YAEEHFLNTHA-PVACSQCSETMER-EILAIH   78 (148)
Q Consensus         7 ~~~~~C~~C~~~~~-~~~l~~H-~~~~~---~~~~~C~~C~~~f~~~-~l~~h~~~~h~-~~~C~~C~~~~~~-~~l~~h   78 (148)
                      ...|.|..|++.+. .++|..| +.|+.   .+.+.|+.|++.+... .+.-|+ ++|+ +..|..||+.|.+ =.|+.|
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHi-rTH~l~c~C~iCGKaFSRPWLLQGH  206 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHI-RTHTLPCECGICGKAFSRPWLLQGH  206 (279)
T ss_pred             CCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHh-hccCCCcccccccccccchHHhhcc
Confidence            33589999999999 9999999 78886   5678999999999877 566675 7776 9999999999998 567999


Q ss_pred             HhhcCCCCcccCCCCCCCCC-hhhHHHHHHH-----------hcccccCCcchhhhh
Q 032068           79 KGENCPQRIVTCDFCEFPLP-AVDLAEHQVA-----------IVNNFENGKTIADLS  123 (148)
Q Consensus        79 ~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~~-----------c~~~~~~~~~~~~~~  123 (148)
                      +|+|+|||||.|+.|+++|. +++|.+|+++           |++.|..-+.|.+..
T Consensus       207 iRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~  263 (279)
T KOG2462|consen  207 IRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHS  263 (279)
T ss_pred             cccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhh
Confidence            99999999999999999999 9999999986           899998888887766

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.78  E-value=8.6e-20  Score=125.32  Aligned_cols=98  Identities=18%  Similarity=0.409  Sum_probs=87.6

Q ss_pred             CCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChh-----hHHHHHHcCCCCccCccchhccch-HHHHhh
Q 032068            7 ETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRK-----YAEEHFLNTHAPVACSQCSETMER-EILAIH   78 (148)
Q Consensus         7 ~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~-----~l~~h~~~~h~~~~C~~C~~~~~~-~~l~~h   78 (148)
                      .+.+.|..|+++|. ...|+.| ++|.-  +..|..||+.|+..     ++++|.++  +||.|..|++.|.. ++|+.|
T Consensus       159 ~ka~~C~~C~K~YvSmpALkMHirTH~l--~c~C~iCGKaFSRPWLLQGHiRTHTGE--KPF~C~hC~kAFADRSNLRAH  234 (279)
T KOG2462|consen  159 KKAFSCKYCGKVYVSMPALKMHIRTHTL--PCECGICGKAFSRPWLLQGHIRTHTGE--KPFSCPHCGKAFADRSNLRAH  234 (279)
T ss_pred             cccccCCCCCceeeehHHHhhHhhccCC--CcccccccccccchHHhhcccccccCC--CCccCCcccchhcchHHHHHH
Confidence            56689999999999 9999999 78884  78999999999977     34444444  69999999999988 999999


Q ss_pred             HhhcCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           79 KGENCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        79 ~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      +++|.+.++|.|+.|++.|. .+-|..|...
T Consensus       235 mQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  235 MQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             HHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            99999999999999999999 9999999875

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.44  E-value=2.9e-13  Score=103.05  Aligned_cols=123  Identities=28%  Similarity=0.537  Sum_probs=99.4

Q ss_pred             CcccCCCCCCCCCcchHHHHHhhcCCC--------------------CccccccCCccChhhHHHHHHcCCCCccCccch
Q 032068            8 TTKICSHCDRAIPSSNIDLHFAHCSRN--------------------LERCKVCGDMVPRKYAEEHFLNTHAPVACSQCS   67 (148)
Q Consensus         8 ~~~~C~~C~~~~~~~~l~~H~~~~~~~--------------------~~~C~~C~~~f~~~~l~~h~~~~h~~~~C~~C~   67 (148)
                      ....|..|.+.++..+|..|+.+|...                    .+.|+.|+..|....+..|....|+++.|+ |+
T Consensus       406 ~~V~C~NC~~~i~l~~l~lHe~~C~r~~V~Cp~~~Cg~v~~r~el~~H~~C~~Cgk~f~~s~LekH~~~~Hkpv~Cp-Cg  484 (567)
T PLN03086        406 DTVECRNCKHYIPSRSIALHEAYCSRHNVVCPHDGCGIVLRVEEAKNHVHCEKCGQAFQQGEMEKHMKVFHEPLQCP-CG  484 (567)
T ss_pred             CeEECCCCCCccchhHHHHHHhhCCCcceeCCcccccceeeccccccCccCCCCCCccchHHHHHHHHhcCCCccCC-CC
Confidence            346799999999989999997777643                    345678888887667888876667899999 99


Q ss_pred             hccchHHHHhhHhhcCCCCcccCCCCCCCCC-----------hhhHHHHHHHhcccccCCc----chhhhhhhccCcce
Q 032068           68 ETMEREILAIHKGENCPQRIVTCDFCEFPLP-----------AVDLAEHQVAIVNNFENGK----TIADLSYLGVMLCC  131 (148)
Q Consensus        68 ~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~-----------~~~l~~H~~~c~~~~~~~~----~~~~~~~~~~~~~~  131 (148)
                      ..+....|..|..++++++++.|++|++.|.           .+.|..|..+||.....+.    .+...+++.|+..|
T Consensus       485 ~~~~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~CG~rt~~C~~Cgk~Vrlrdm~~H~~~~  563 (567)
T PLN03086        485 VVLEKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESICGSRTAPCDSCGRSVMLKEMDIHQIAV  563 (567)
T ss_pred             CCcchhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhcCCcceEccccCCeeeehhHHHHHHHh
Confidence            7666699999999999999999999999885           2479999999988887754    35667777777654

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.37  E-value=1.2e-13  Score=107.06  Aligned_cols=49  Identities=20%  Similarity=0.438  Sum_probs=45.7

Q ss_pred             CccCccchhccch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           60 PVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        60 ~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      |-+|..|.+...- +.|+-|.++|+||+||+|++||++|. +.+|+.|+-+
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~v  655 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSV  655 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccc
Confidence            6689999999887 99999999999999999999999999 9999999854

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.32  E-value=5.4e-13  Score=102.39  Aligned_cols=97  Identities=19%  Similarity=0.382  Sum_probs=81.8

Q ss_pred             ccCCCCCCCCC-cchHHHH-H-hhcC-CCCccccccCCccChh-hHHHHHHcCC----------------CCccCccchh
Q 032068           10 KICSHCDRAIP-SSNIDLH-F-AHCS-RNLERCKVCGDMVPRK-YAEEHFLNTH----------------APVACSQCSE   68 (148)
Q Consensus        10 ~~C~~C~~~~~-~~~l~~H-~-~~~~-~~~~~C~~C~~~f~~~-~l~~h~~~~h----------------~~~~C~~C~~   68 (148)
                      .+|+.|.+.+. ...|+.| + +|-. +..|.|..|...|... .|..|. ..|                +.|.|..||+
T Consensus       211 ltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm-~~hkpg~dqa~sltqsa~lRKFKCtECgK  289 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHM-QLHKPGGDQAISLTQSALLRKFKCTECGK  289 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHH-HhhcCCCcccccccchhhhccccccccch
Confidence            47899999999 8899999 6 4443 4468999999999988 344443 222                3899999999


Q ss_pred             ccch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhhHHHHHH
Q 032068           69 TMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDLAEHQV  107 (148)
Q Consensus        69 ~~~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~  107 (148)
                      .|.. ..|..|+|+|.||+||.|+.|+++|. +.....|+-
T Consensus       290 AFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  290 AFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             hhhhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence            9999 89999999999999999999999999 889999974

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.26  E-value=1.4e-12  Score=92.90  Aligned_cols=107  Identities=21%  Similarity=0.344  Sum_probs=63.2

Q ss_pred             CccCCCCcccCCCCCCCCC-cchHHHH-H--hhcCCCCccccccCCccChh-hHHHHHHcCCCCccCccchhccch-HHH
Q 032068            2 AMTSDETTKICSHCDRAIP-SSNIDLH-F--AHCSRNLERCKVCGDMVPRK-YAEEHFLNTHAPVACSQCSETMER-EIL   75 (148)
Q Consensus         2 ~~h~~~~~~~C~~C~~~~~-~~~l~~H-~--~~~~~~~~~C~~C~~~f~~~-~l~~h~~~~h~~~~C~~C~~~~~~-~~l   75 (148)
                      ++|+++|...|+.|+.-|. ...|-+| +  .-...++|.|..|.+.|.++ -|..|..+--..|.|+.|.-..+. +.|
T Consensus       200 r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCplCdmtc~~~ssL  279 (467)
T KOG3608|consen  200 RTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYKCPLCDMTCSSASSL  279 (467)
T ss_pred             HhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhcccccccccCCCChHHH
Confidence            4677777777777777777 7777777 4  33345567777777777666 233443211124555555555544 555


Q ss_pred             HhhHhh-cCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           76 AIHKGE-NCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        76 ~~h~~~-~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      ..|++. |...+|++|+.|+..+. -+.|+.|..+
T Consensus       280 ~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~  314 (467)
T KOG3608|consen  280 TTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQV  314 (467)
T ss_pred             HHHHHhhhccCCCccccchhhhhccHHHHHHHHHh
Confidence            555542 44556666666666555 6666666544

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.26  E-value=1e-12  Score=100.91  Aligned_cols=78  Identities=22%  Similarity=0.481  Sum_probs=55.2

Q ss_pred             CCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChhhHHHHHHcCCCCccCccchhccchHHHHhhHhhcC
Q 032068            6 DETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGENC   83 (148)
Q Consensus         6 ~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~~l~~h~~~~h~~~~C~~C~~~~~~~~l~~h~~~~~   83 (148)
                      .+-.|.|..|+++|. .+.|.+| -.|+|.+|++|..|.+.|..+                        ..|..|.|.|.
T Consensus       891 e~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHK------------------------HHLtEHkRLHS  946 (1007)
T KOG3623|consen  891 EDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHK------------------------HHLTEHKRLHS  946 (1007)
T ss_pred             ccccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhh------------------------hhhhhhhhhcc
Confidence            344566666666666 6666666 466666666666666655544                        34455778899


Q ss_pred             CCCcccCCCCCCCCC-hhhHHHHHH
Q 032068           84 PQRIVTCDFCEFPLP-AVDLAEHQV  107 (148)
Q Consensus        84 ~~~~~~C~~C~~~f~-~~~l~~H~~  107 (148)
                      ||+||.|+.|+++|. +.....|+.
T Consensus       947 GEKPfQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  947 GEKPFQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             CCCcchhhhhhhhcccccchHhhhc
Confidence            999999999999999 888888864

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.20  E-value=4.9e-11  Score=85.15  Aligned_cols=131  Identities=18%  Similarity=0.270  Sum_probs=96.3

Q ss_pred             cccCCCCCCCCC-cchHHHH-H-hhcCCCCccccccCCccChh-hHHHHHHcCCC--CccCcc--chhccch-HHHHhhH
Q 032068            9 TKICSHCDRAIP-SSNIDLH-F-AHCSRNLERCKVCGDMVPRK-YAEEHFLNTHA--PVACSQ--CSETMER-EILAIHK   79 (148)
Q Consensus         9 ~~~C~~C~~~~~-~~~l~~H-~-~~~~~~~~~C~~C~~~f~~~-~l~~h~~~~h~--~~~C~~--C~~~~~~-~~l~~h~   79 (148)
                      -|+|+.|+.+.+ .+.|..| + .|...+||+|..|+..+... +|..|.. +|.  .|.|..  |..++.. .+|..|.
T Consensus       263 ~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~-~HS~~~y~C~h~~C~~s~r~~~q~~~H~  341 (467)
T KOG3608|consen  263 CYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQ-VHSKTVYQCEHPDCHYSVRTYTQMRRHF  341 (467)
T ss_pred             cccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHH-hccccceecCCCCCcHHHHHHHHHHHHH
Confidence            367888888877 8888888 6 77778888888888777766 5666653 442  677755  7777766 7777776


Q ss_pred             hhc-CC--CCcccCCCCCCCCC-hhhHHHHHHHhcccccCCcchhhhhhhccCcceeeeccchhhh
Q 032068           80 GEN-CP--QRIVTCDFCEFPLP-AVDLAEHQVAIVNNFENGKTIADLSYLGVMLCCFVIVGSLWES  141 (148)
Q Consensus        80 ~~~-~~--~~~~~C~~C~~~f~-~~~l~~H~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (148)
                      +.+ .|  ..+|.|-.|.+.|. ...|..|+.. ...|..-+...++.|..+.|+.-++...++||
T Consensus       342 ~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~k-kH~f~~PsGh~RFtYk~~edG~mRLqt~rles  406 (467)
T KOG3608|consen  342 LEVHEGNNPILYACHCCDRFFTSGKSLSAHLMK-KHGFRLPSGHKRFTYKVDEDGFMRLQTTRLES  406 (467)
T ss_pred             HHhccCCCCCceeeecchhhhccchhHHHHHHH-hhcccCCCCCCceeeeeccCceeeeeeeehhh
Confidence            532 23  34578888888888 7788888753 24577777888999999999999998888876

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.20  E-value=4.4e-12  Score=84.14  Aligned_cols=77  Identities=21%  Similarity=0.393  Sum_probs=63.5

Q ss_pred             CCCCccccccCCccChhhHHHHHHcCCC---CccCccchhccch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhhHHHHH
Q 032068           32 SRNLERCKVCGDMVPRKYAEEHFLNTHA---PVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDLAEHQ  106 (148)
Q Consensus        32 ~~~~~~C~~C~~~f~~~~l~~h~~~~h~---~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~l~~H~  106 (148)
                      +...+.|..|+++|....|...+..+|.   .+.|..||+.|.. -+|..|.++|+|.+||+|..|+++|. +-.|..|+
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHH
Confidence            3456889999999987754433346663   7789999999988 88999999999999999999999999 88999998


Q ss_pred             HH
Q 032068          107 VA  108 (148)
Q Consensus       107 ~~  108 (148)
                      +.
T Consensus       194 ~k  195 (267)
T KOG3576|consen  194 KK  195 (267)
T ss_pred             HH
Confidence            75

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.12  E-value=3.5e-11  Score=79.90  Aligned_cols=103  Identities=20%  Similarity=0.390  Sum_probs=82.7

Q ss_pred             CCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChh-hHHHHHHcCC---CCccCccchhccch-HHHHh
Q 032068            5 SDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRK-YAEEHFLNTH---APVACSQCSETMER-EILAI   77 (148)
Q Consensus         5 ~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~-~l~~h~~~~h---~~~~C~~C~~~~~~-~~l~~   77 (148)
                      .+...+.|..|++.|. ..-|.+| ..|...+.+.|..|++.|-.. ++..|. +.|   +||.|..|++.|.. -.|..
T Consensus       113 sd~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~-rthtgvrpykc~~c~kaftqrcsles  191 (267)
T KOG3576|consen  113 SDQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHT-RTHTGVRPYKCSLCEKAFTQRCSLES  191 (267)
T ss_pred             CCCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhh-ccccCccccchhhhhHHHHhhccHHH
Confidence            4566799999999999 8888899 699999999999999999877 677665 555   49999999999987 67777


Q ss_pred             hHhhcC-----------CCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           78 HKGENC-----------PQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        78 h~~~~~-----------~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      |...-.           ..+.|.|+.||..-. ...+..|.+.
T Consensus       192 hl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~  234 (267)
T KOG3576|consen  192 HLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKL  234 (267)
T ss_pred             HHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHh
Confidence            765322           346799999998766 6667777664

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.06  E-value=4.8e-10  Score=85.76  Aligned_cols=100  Identities=20%  Similarity=0.486  Sum_probs=80.5

Q ss_pred             CCCcccCCCCCCCCCcchHHHH-HhhcCCCCccccccCCccChhhHHHHHHc-C-CCCccCccchhccc----------h
Q 032068            6 DETTKICSHCDRAIPSSNIDLH-FAHCSRNLERCKVCGDMVPRKYAEEHFLN-T-HAPVACSQCSETME----------R   72 (148)
Q Consensus         6 ~~~~~~C~~C~~~~~~~~l~~H-~~~~~~~~~~C~~C~~~f~~~~l~~h~~~-~-h~~~~C~~C~~~~~----------~   72 (148)
                      -++.+.|..|++.|....|..| ..+.  .++.|+ |+..+....+..|... + .+++.|..|+..|.          .
T Consensus       450 l~~H~~C~~Cgk~f~~s~LekH~~~~H--kpv~Cp-Cg~~~~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~  526 (567)
T PLN03086        450 AKNHVHCEKCGQAFQQGEMEKHMKVFH--EPLQCP-CGVVLEKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDR  526 (567)
T ss_pred             cccCccCCCCCCccchHHHHHHHHhcC--CCccCC-CCCCcchhHHHhhhhccCCCCceeCCCCCCccccCccccchhhh
Confidence            3567899999999997789999 5553  689999 9977655577777532 1 25999999999884          2


Q ss_pred             -HHHHhhHhhcCCCCcccCCCCCCCCChhhHHHHHHHh
Q 032068           73 -EILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQVAI  109 (148)
Q Consensus        73 -~~l~~h~~~~~~~~~~~C~~C~~~f~~~~l~~H~~~c  109 (148)
                       +.|..|+.. +|.+++.|..||+.|+...+..|+-.|
T Consensus       527 ~s~Lt~HE~~-CG~rt~~C~~Cgk~Vrlrdm~~H~~~~  563 (567)
T PLN03086        527 LRGMSEHESI-CGSRTAPCDSCGRSVMLKEMDIHQIAV  563 (567)
T ss_pred             hhhHHHHHHh-cCCcceEccccCCeeeehhHHHHHHHh
Confidence             579999976 799999999999999988889998655

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.95  E-value=1.9e-10  Score=89.83  Aligned_cols=99  Identities=20%  Similarity=0.444  Sum_probs=80.2

Q ss_pred             CCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChh-hHHHHHHcCCC-------CccCc---cchhccch-
Q 032068            7 ETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRK-YAEEHFLNTHA-------PVACS---QCSETMER-   72 (148)
Q Consensus         7 ~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~-~l~~h~~~~h~-------~~~C~---~C~~~~~~-   72 (148)
                      -.|.+|..|.++.. .+.|+.| +.|.+++||+|..|++.|..+ +|+.|. .+|+       .+.|+   .|.+.|.. 
T Consensus       603 TdPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~-~vHka~p~~R~q~ScP~~~ic~~kftn~  681 (958)
T KOG1074|consen  603 TDPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHM-SVHKAKPPARVQFSCPSTFICQKKFTNA  681 (958)
T ss_pred             CCccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcc-cccccCccccccccCCchhhhccccccc
Confidence            45789999999999 9999999 899999999999999999999 788886 5553       77898   99999988 


Q ss_pred             HHHHhhHhhcCCC-C------------cccCCCCCCCCC-hhhHHHHH
Q 032068           73 EILAIHKGENCPQ-R------------IVTCDFCEFPLP-AVDLAEHQ  106 (148)
Q Consensus        73 ~~l~~h~~~~~~~-~------------~~~C~~C~~~f~-~~~l~~H~  106 (148)
                      -.|.+|+++|.+. .            ...|..|.+.|. -..+..++
T Consensus       682 V~lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~  729 (958)
T KOG1074|consen  682 VTLPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQI  729 (958)
T ss_pred             ccccceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhh
Confidence            7889999988722 2            235777888875 44444443

>PHA02768 hypothetical protein; Provisional

Probab=98.67  E-value=1e-08  Score=54.49  Aligned_cols=41  Identities=12%  Similarity=0.194  Sum_probs=35.2

Q ss_pred             CccCccchhccch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhhH
Q 032068           60 PVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDL  102 (148)
Q Consensus        60 ~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~l  102 (148)
                      .|.|+.||+.|.. +.|..|+++|.  +++.|..|++.|. .+.|
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            5789999999988 89999999988  6889999999888 5544

>PHA00733 hypothetical protein

Probab=98.57  E-value=3.9e-08  Score=62.16  Aligned_cols=74  Identities=14%  Similarity=0.201  Sum_probs=56.5

Q ss_pred             CCCccccccCCccChhhHHHHH------HcCC--CCccCccchhccch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhhH
Q 032068           33 RNLERCKVCGDMVPRKYAEEHF------LNTH--APVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDL  102 (148)
Q Consensus        33 ~~~~~C~~C~~~f~~~~l~~h~------~~~h--~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~l  102 (148)
                      .+++.|..|...|....+..+.      ...+  .+|.|+.|++.|.. ..|..|++.+  +.++.|+.|++.|. ...|
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL  115 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDST  115 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHH
Confidence            4567898998888766332221      1111  39999999999988 8999999865  46799999999999 8999


Q ss_pred             HHHHHH
Q 032068          103 AEHQVA  108 (148)
Q Consensus       103 ~~H~~~  108 (148)
                      ..|...
T Consensus       116 ~~H~~~  121 (128)
T PHA00733        116 LDHVCK  121 (128)
T ss_pred             HHHHHH
Confidence            999763

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.49  E-value=4e-08  Score=44.64  Aligned_cols=25  Identities=16%  Similarity=0.371  Sum_probs=22.6

Q ss_pred             HHHhhHhhcCCCCcccCCCCCCCCC
Q 032068           74 ILAIHKGENCPQRIVTCDFCEFPLP   98 (148)
Q Consensus        74 ~l~~h~~~~~~~~~~~C~~C~~~f~   98 (148)
                      +|..|+++|.+++||.|+.|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            4788999999999999999998874

...

>PHA00733 hypothetical protein

Probab=98.22  E-value=8.3e-07  Score=56.15  Aligned_cols=77  Identities=13%  Similarity=0.181  Sum_probs=58.2

Q ss_pred             CCCcccCCCCCCCCC-cchHHHH------HhhcCCCCccccccCCccChh-hHHHHHHcCCCCccCccchhccch-HHHH
Q 032068            6 DETTKICSHCDRAIP-SSNIDLH------FAHCSRNLERCKVCGDMVPRK-YAEEHFLNTHAPVACSQCSETMER-EILA   76 (148)
Q Consensus         6 ~~~~~~C~~C~~~~~-~~~l~~H------~~~~~~~~~~C~~C~~~f~~~-~l~~h~~~~h~~~~C~~C~~~~~~-~~l~   76 (148)
                      .++++.|..|++.|. ...|..+      +...+.+|+.|+.|++.|... .+..|....-.++.|+.|++.|.. ..|.
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~~~~~C~~CgK~F~~~~sL~  116 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYTEHSKVCPVCGKEFRNTDSTL  116 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcCCcCccCCCCCCccCCHHHHH
Confidence            467789999998887 6666654      123347799999999999988 566776421147999999999988 8899


Q ss_pred             hhHhhc
Q 032068           77 IHKGEN   82 (148)
Q Consensus        77 ~h~~~~   82 (148)
                      .|+...
T Consensus       117 ~H~~~~  122 (128)
T PHA00733        117 DHVCKK  122 (128)
T ss_pred             HHHHHh
Confidence            888643

>PHA02768 hypothetical protein; Provisional

Probab=98.21  E-value=8.6e-07  Score=47.14  Aligned_cols=37  Identities=16%  Similarity=0.231  Sum_probs=27.2

Q ss_pred             ccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChh
Q 032068           10 KICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRK   48 (148)
Q Consensus        10 ~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~   48 (148)
                      |+|+.||+.|. .++|..| +.|.  ++++|..|++.|...
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~   44 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRT   44 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccc
Confidence            67888888888 7788888 5666  467777777777644

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.09  E-value=1.9e-06  Score=39.05  Aligned_cols=24  Identities=25%  Similarity=0.553  Sum_probs=20.4

Q ss_pred             hHHHH-HhhcCCCCccccccCCccC
Q 032068           23 NIDLH-FAHCSRNLERCKVCGDMVP   46 (148)
Q Consensus        23 ~l~~H-~~~~~~~~~~C~~C~~~f~   46 (148)
                      +|..| +.|.+++|+.|+.|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            47888 6899999999999998875

...

>PHA00616 hypothetical protein

Probab=98.02  E-value=2.7e-06  Score=43.09  Aligned_cols=33  Identities=15%  Similarity=0.267  Sum_probs=29.0

Q ss_pred             CccCccchhccch-HHHHhhHhhcCCCCcccCCC
Q 032068           60 PVACSQCSETMER-EILAIHKGENCPQRIVTCDF   92 (148)
Q Consensus        60 ~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~   92 (148)
                      ||+|+.||+.|.. +.|..|++.+.+++++.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            6889999999988 89999999999999988764

>PHA00616 hypothetical protein

Probab=97.70  E-value=1.4e-05  Score=40.54  Aligned_cols=32  Identities=13%  Similarity=0.185  Sum_probs=28.1

Q ss_pred             cccCCCCCCCCC-cchHHHH-HhhcCCCCccccc
Q 032068            9 TKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKV   40 (148)
Q Consensus         9 ~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~   40 (148)
                      ||+|..||+.|. .++|..| ..+.++.++.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            689999999999 9999999 7888888888763

>PHA00732 hypothetical protein

Probab=97.67  E-value=3.8e-05  Score=44.37  Aligned_cols=42  Identities=21%  Similarity=0.388  Sum_probs=26.4

Q ss_pred             CccCccchhccch-HHHHhhHhh-cCCCCcccCCCCCCCCChhhHHHHH
Q 032068           60 PVACSQCSETMER-EILAIHKGE-NCPQRIVTCDFCEFPLPAVDLAEHQ  106 (148)
Q Consensus        60 ~~~C~~C~~~~~~-~~l~~h~~~-~~~~~~~~C~~C~~~f~~~~l~~H~  106 (148)
                      ||.|..|++.|.. ..|..|++. |.   ++.|+.|++.|.  .+..|.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~--~l~~H~   44 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR--RLNQHF   44 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC--Chhhhh
Confidence            4667777777766 677777653 43   246777777765  345554

>PHA00732 hypothetical protein

Probab=97.59  E-value=7.2e-05  Score=43.25  Aligned_cols=41  Identities=24%  Similarity=0.470  Sum_probs=30.2

Q ss_pred             cccCCCCCCCCC-cchHHHH-H-hhcCCCCccccccCCccChhhHHHHH
Q 032068            9 TKICSHCDRAIP-SSNIDLH-F-AHCSRNLERCKVCGDMVPRKYAEEHF   54 (148)
Q Consensus         9 ~~~C~~C~~~~~-~~~l~~H-~-~~~~~~~~~C~~C~~~f~~~~l~~h~   54 (148)
                      ||.|..|++.|. .+.|..| . .|.+   +.|+.|++.|..  +..|.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~~--l~~H~   44 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYRR--LNQHF   44 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeCC--hhhhh
Confidence            578899999998 8888888 4 3543   478888888873  44454

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=97.53  E-value=2.7e-05  Score=57.49  Aligned_cols=29  Identities=21%  Similarity=0.293  Sum_probs=23.5

Q ss_pred             cccCCCCCCCCC-hhhHHHHHHHhcccccC
Q 032068           87 IVTCDFCEFPLP-AVDLAEHQVAIVNNFEN  115 (148)
Q Consensus        87 ~~~C~~C~~~f~-~~~l~~H~~~c~~~~~~  115 (148)
                      .|.|..|++.|+ ..-|..|+..+.+....
T Consensus       356 i~~C~~C~KkFrRqAYLrKHqlthq~~~~~  385 (500)
T KOG3993|consen  356 IFSCHTCGKKFRRQAYLRKHQLTHQRAPLA  385 (500)
T ss_pred             eeecHHhhhhhHHHHHHHHhHHhhhccccc
Confidence            589999999999 88999998876554444

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.42  E-value=0.0003  Score=37.64  Aligned_cols=46  Identities=20%  Similarity=0.445  Sum_probs=25.5

Q ss_pred             ccCccchhccchHHHHhhHhh-cCCC-CcccCCCCCCCCChhhHHHHHH
Q 032068           61 VACSQCSETMEREILAIHKGE-NCPQ-RIVTCDFCEFPLPAVDLAEHQV  107 (148)
Q Consensus        61 ~~C~~C~~~~~~~~l~~h~~~-~~~~-~~~~C~~C~~~f~~~~l~~H~~  107 (148)
                      |.|+.|++.|....|..|... |..+ +.+.||.|...+. .+|..|+.
T Consensus         3 f~CP~C~~~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~-~~l~~Hl~   50 (54)
T PF05605_consen    3 FTCPYCGKGFSESSLVEHCEDEHRSESKNVVCPICSSRVT-DNLIRHLN   50 (54)
T ss_pred             cCCCCCCCccCHHHHHHHHHhHCcCCCCCccCCCchhhhh-hHHHHHHH
Confidence            566666665444556666432 3332 4567777765433 36666654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.40  E-value=0.00033  Score=37.45  Aligned_cols=45  Identities=22%  Similarity=0.425  Sum_probs=23.8

Q ss_pred             cccCCCCCCCCCcchHHHH-H-hhcCC-CCccccccCCccChhhHHHHH
Q 032068            9 TKICSHCDRAIPSSNIDLH-F-AHCSR-NLERCKVCGDMVPRKYAEEHF   54 (148)
Q Consensus         9 ~~~C~~C~~~~~~~~l~~H-~-~~~~~-~~~~C~~C~~~f~~~~l~~h~   54 (148)
                      .|.|+.|++.|....|..| . .|..+ +.+.||.|...+.. ++..|+
T Consensus         2 ~f~CP~C~~~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~~-~l~~Hl   49 (54)
T PF05605_consen    2 SFTCPYCGKGFSESSLVEHCEDEHRSESKNVVCPICSSRVTD-NLIRHL   49 (54)
T ss_pred             CcCCCCCCCccCHHHHHHHHHhHCcCCCCCccCCCchhhhhh-HHHHHH
Confidence            3566666664445566666 4 44443 34566666654332 344443

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.20  E-value=0.00016  Score=31.39  Aligned_cols=21  Identities=19%  Similarity=0.449  Sum_probs=15.0

Q ss_pred             ccCCCCCCCCC-hhhHHHHHHH
Q 032068           88 VTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        88 ~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      |.|+.|++.|. ...|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            46777777777 7777777654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.92  E-value=0.00031  Score=30.51  Aligned_cols=21  Identities=19%  Similarity=0.434  Sum_probs=15.2

Q ss_pred             ccCccchhccch-HHHHhhHhh
Q 032068           61 VACSQCSETMER-EILAIHKGE   81 (148)
Q Consensus        61 ~~C~~C~~~~~~-~~l~~h~~~   81 (148)
                      |.|+.|++.|.. ..|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            467778888866 777777754

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=96.83  E-value=0.0011  Score=29.51  Aligned_cols=22  Identities=23%  Similarity=0.451  Sum_probs=15.7

Q ss_pred             ccCCCCCCCCChhhHHHHHHHh
Q 032068           88 VTCDFCEFPLPAVDLAEHQVAI  109 (148)
Q Consensus        88 ~~C~~C~~~f~~~~l~~H~~~c  109 (148)
                      ..|+.||+.|..+.|..|+.+|
T Consensus         3 ~~C~~CgR~F~~~~l~~H~~~C   24 (25)
T PF13913_consen    3 VPCPICGRKFNPDRLEKHEKIC   24 (25)
T ss_pred             CcCCCCCCEECHHHHHHHHHhc
Confidence            3577777777777777777665

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.67  E-value=0.00077  Score=30.44  Aligned_cols=22  Identities=27%  Similarity=0.617  Sum_probs=11.9

Q ss_pred             ccCccchhccch-HHHHhhHhhc
Q 032068           61 VACSQCSETMER-EILAIHKGEN   82 (148)
Q Consensus        61 ~~C~~C~~~~~~-~~l~~h~~~~   82 (148)
                      +.|..|++.|.. ..|..|.+.|
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCccCCccCChhHHHHHhHHh
Confidence            455555555555 5555555443

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.52  E-value=0.0018  Score=27.95  Aligned_cols=21  Identities=19%  Similarity=0.490  Sum_probs=13.6

Q ss_pred             ccCCCCCCCCC-hhhHHHHHHH
Q 032068           88 VTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        88 ~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      |.|+.|++.|. ...|..|++.
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~   22 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRT   22 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHh
Confidence            46777777777 7777777653

...

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=96.44  E-value=0.0005  Score=51.04  Aligned_cols=20  Identities=5%  Similarity=-0.052  Sum_probs=12.8

Q ss_pred             hcccccCCcchhhhhhhccC
Q 032068          109 IVNNFENGKTIADLSYLGVM  128 (148)
Q Consensus       109 c~~~~~~~~~~~~~~~~~~~  128 (148)
                      |++.|.....|+...+.-+|
T Consensus       362 C~KkFrRqAYLrKHqlthq~  381 (500)
T KOG3993|consen  362 CGKKFRRQAYLRKHQLTHQR  381 (500)
T ss_pred             hhhhhHHHHHHHHhHHhhhc
Confidence            66777666666666555555

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.21  E-value=0.0011  Score=29.86  Aligned_cols=23  Identities=26%  Similarity=0.634  Sum_probs=15.4

Q ss_pred             cccCCCCCCCCC-cchHHHH-Hhhc
Q 032068            9 TKICSHCDRAIP-SSNIDLH-FAHC   31 (148)
Q Consensus         9 ~~~C~~C~~~~~-~~~l~~H-~~~~   31 (148)
                      ||+|..|++.|. ...|..| +.|+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            467777777777 7777777 3443

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=95.87  E-value=0.0037  Score=26.91  Aligned_cols=21  Identities=19%  Similarity=0.458  Sum_probs=13.4

Q ss_pred             ccCccchhccch-HHHHhhHhh
Q 032068           61 VACSQCSETMER-EILAIHKGE   81 (148)
Q Consensus        61 ~~C~~C~~~~~~-~~l~~h~~~   81 (148)
                      |.|+.|+..|.. ..|..|+..
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~   22 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRT   22 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHh
Confidence            457777777766 777777754

...

>PRK04860 hypothetical protein; Provisional

Probab=95.80  E-value=0.0051  Score=40.46  Aligned_cols=36  Identities=22%  Similarity=0.445  Sum_probs=30.5

Q ss_pred             CccCccchhccchHHHHhhHhhcCCCCcccCCCCCCCCC
Q 032068           60 PVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLP   98 (148)
Q Consensus        60 ~~~C~~C~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~   98 (148)
                      +|.|. |+.  ....+..|.+++.++++|.|..|+..|.
T Consensus       119 ~Y~C~-C~~--~~~~~rrH~ri~~g~~~YrC~~C~~~l~  154 (160)
T PRK04860        119 PYRCK-CQE--HQLTVRRHNRVVRGEAVYRCRRCGETLV  154 (160)
T ss_pred             EEEcC-CCC--eeCHHHHHHHHhcCCccEECCCCCceeE
Confidence            78997 886  2366788999999999999999998876

>smart00355 ZnF_C2H2 zinc finger

Probab=95.69  E-value=0.011  Score=25.73  Aligned_cols=20  Identities=25%  Similarity=0.353  Sum_probs=16.3

Q ss_pred             ccCCCCCCCCC-hhhHHHHHH
Q 032068           88 VTCDFCEFPLP-AVDLAEHQV  107 (148)
Q Consensus        88 ~~C~~C~~~f~-~~~l~~H~~  107 (148)
                      |.|+.|++.|. ...|..|++
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~   21 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMR   21 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHH
Confidence            46888888888 888888876

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=95.68  E-value=0.0072  Score=36.01  Aligned_cols=16  Identities=25%  Similarity=0.694  Sum_probs=0.0

Q ss_pred             CCCCCCCCC-cchHHHH
Q 032068           12 CSHCDRAIP-SSNIDLH   27 (148)
Q Consensus        12 C~~C~~~~~-~~~l~~H   27 (148)
                      |..|+..|. ...|..|
T Consensus         2 C~~C~~~f~~~~~l~~H   18 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQH   18 (100)
T ss_dssp             -----------------
T ss_pred             ccccccccccccccccc
Confidence            555555555 5555555

>PF02176 zf-TRAF: TRAF-type zinc finger; PDB: 2EOD_A 2YUC_A 3HCU_A 3HCS_B 3HCT_A

Probab=95.58  E-value=0.003  Score=34.30  Aligned_cols=46  Identities=41%  Similarity=0.902  Sum_probs=24.8

Q ss_pred             CccCcc--chhccchHHHHhhHhhcCCCCcccCCC----CCCCCChhhHHHH
Q 032068           60 PVACSQ--CSETMEREILAIHKGENCPQRIVTCDF----CEFPLPAVDLAEH  105 (148)
Q Consensus        60 ~~~C~~--C~~~~~~~~l~~h~~~~~~~~~~~C~~----C~~~f~~~~l~~H  105 (148)
                      +..|+.  |...+....|..|....+..++..|++    |+..+.+..|.+|
T Consensus         9 ~v~C~~~cc~~~i~r~~l~~H~~~~C~~~~v~C~~~~~GC~~~~~~~~l~~H   60 (60)
T PF02176_consen    9 PVPCPNGCCNEMIPRKELDDHLENECPKRPVPCPYSPYGCKERVPREDLEEH   60 (60)
T ss_dssp             EEE-TT--S-BEEECCCHHHHHHTTSTTSEEE-SS----S--EEEHHHHHHC
T ss_pred             EeeCCCCCcccceeHHHHHHHHHccCCCCcEECCCCCCCCCCccchhHHhCC
Confidence            445554  334455566666666566666777777    7666666666554

>PF02176 zf-TRAF: TRAF-type zinc finger; PDB: 2EOD_A 2YUC_A 3HCU_A 3HCS_B 3HCT_A

Probab=95.43  E-value=0.0068  Score=32.87  Aligned_cols=45  Identities=29%  Similarity=0.621  Sum_probs=24.1

Q ss_pred             CCcccCCC--CCCCCCcchHHHH-HhhcCCCCccccc----cCCccChhhHH
Q 032068            7 ETTKICSH--CDRAIPSSNIDLH-FAHCSRNLERCKV----CGDMVPRKYAE   51 (148)
Q Consensus         7 ~~~~~C~~--C~~~~~~~~l~~H-~~~~~~~~~~C~~----C~~~f~~~~l~   51 (148)
                      ..+..|+.  |...+.+..|..| ...++.++..|+.    |...+...++.
T Consensus         7 ~~~v~C~~~cc~~~i~r~~l~~H~~~~C~~~~v~C~~~~~GC~~~~~~~~l~   58 (60)
T PF02176_consen    7 FRPVPCPNGCCNEMIPRKELDDHLENECPKRPVPCPYSPYGCKERVPREDLE   58 (60)
T ss_dssp             TSEEE-TT--S-BEEECCCHHHHHHTTSTTSEEE-SS----S--EEEHHHHH
T ss_pred             CCEeeCCCCCcccceeHHHHHHHHHccCCCCcEECCCCCCCCCCccchhHHh
Confidence            34566655  4444556777777 4577777777776    66655544443

>PRK04860 hypothetical protein; Provisional

Probab=94.48  E-value=0.035  Score=36.53  Aligned_cols=35  Identities=20%  Similarity=0.510  Sum_probs=22.5

Q ss_pred             cccCCCCCCCCCcchHHHH-HhhcCCCCccccccCCccC
Q 032068            9 TKICSHCDRAIPSSNIDLH-FAHCSRNLERCKVCGDMVP   46 (148)
Q Consensus         9 ~~~C~~C~~~~~~~~l~~H-~~~~~~~~~~C~~C~~~f~   46 (148)
                      +|.|. |+.  ....+..| +.+.+++++.|..|+..|.
T Consensus       119 ~Y~C~-C~~--~~~~~rrH~ri~~g~~~YrC~~C~~~l~  154 (160)
T PRK04860        119 PYRCK-CQE--HQLTVRRHNRVVRGEAVYRCRRCGETLV  154 (160)
T ss_pred             EEEcC-CCC--eeCHHHHHHHHhcCCccEECCCCCceeE
Confidence            46676 665  24556667 5777777777777776654

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=94.39  E-value=0.025  Score=40.89  Aligned_cols=15  Identities=13%  Similarity=0.507  Sum_probs=8.1

Q ss_pred             CCCcccCCCCCCCCC
Q 032068           84 PQRIVTCDFCEFPLP   98 (148)
Q Consensus        84 ~~~~~~C~~C~~~f~   98 (148)
                      ..+||.|+.|++++.
T Consensus       395 ~~KPYrCevC~KRYK  409 (423)
T COG5189         395 KDKPYRCEVCDKRYK  409 (423)
T ss_pred             cCCceeccccchhhc
Confidence            345555555555554

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=94.37  E-value=0.0099  Score=42.90  Aligned_cols=64  Identities=16%  Similarity=0.399  Sum_probs=42.5

Q ss_pred             CCcccC--CCCCCCCC-cchHHHH-H-hhcCCCCccccc--cCCccChhhHHHHHHcCCCCccCccchhccch-HHHHhh
Q 032068            7 ETTKIC--SHCDRAIP-SSNIDLH-F-AHCSRNLERCKV--CGDMVPRKYAEEHFLNTHAPVACSQCSETMER-EILAIH   78 (148)
Q Consensus         7 ~~~~~C--~~C~~~~~-~~~l~~H-~-~~~~~~~~~C~~--C~~~f~~~~l~~h~~~~h~~~~C~~C~~~~~~-~~l~~h   78 (148)
                      +|||.|  +.|.+++. ...|+-| + .|+..+...-+.  -...|         ....+||.|..|++.+.. ..|+=|
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F---------~~~~KPYrCevC~KRYKNlNGLKYH  417 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIF---------SAKDKPYRCEVCDKRYKNLNGLKYH  417 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccc---------cccCCceeccccchhhccCccceec
Confidence            589999  45999998 8888888 4 666655544331  11111         111269999999999977 666655


Q ss_pred             H
Q 032068           79 K   79 (148)
Q Consensus        79 ~   79 (148)
                      .
T Consensus       418 r  418 (423)
T COG5189         418 R  418 (423)
T ss_pred             c
Confidence            4

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=94.21  E-value=0.031  Score=29.17  Aligned_cols=21  Identities=33%  Similarity=0.615  Sum_probs=9.3

Q ss_pred             CCcccCCCCCCCCC-cchHHHH
Q 032068            7 ETTKICSHCDRAIP-SSNIDLH   27 (148)
Q Consensus         7 ~~~~~C~~C~~~~~-~~~l~~H   27 (148)
                      +.|..|+.|+..+. ..+|..|
T Consensus        22 ~~PatCP~C~a~~~~srnLrRH   43 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRH   43 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHH
T ss_pred             CCCCCCCcchhhccchhhHHHH
Confidence            34555666666555 5556655

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG2186 consensus Cell growth-regulating nucleolar protein [Cell cycle control, cell division, chromosome partitioning]

Probab=93.90  E-value=0.041  Score=38.49  Aligned_cols=47  Identities=19%  Similarity=0.484  Sum_probs=40.1

Q ss_pred             cccCCCCCCCCCcchHHHHHhhcCCCCccccccCCccChhhHHHHHH
Q 032068            9 TKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFL   55 (148)
Q Consensus         9 ~~~C~~C~~~~~~~~l~~H~~~~~~~~~~C~~C~~~f~~~~l~~h~~   55 (148)
                      -|.|..||.......+..|+.-|...-|.|..|+..|-..+...|..
T Consensus         3 ~FtCnvCgEsvKKp~vekH~srCrn~~fSCIDC~k~F~~~sYknH~k   49 (276)
T KOG2186|consen    3 FFTCNVCGESVKKPQVEKHMSRCRNAYFSCIDCGKTFERVSYKNHTK   49 (276)
T ss_pred             EEehhhhhhhccccchHHHHHhccCCeeEEeecccccccchhhhhhh
Confidence            37899999999988899998778778899999999998877777764

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=93.79  E-value=0.04  Score=28.75  Aligned_cols=28  Identities=18%  Similarity=0.363  Sum_probs=14.6

Q ss_pred             CccCccchhccch-HHHHhhHhhcCCCCc
Q 032068           60 PVACSQCSETMER-EILAIHKGENCPQRI   87 (148)
Q Consensus        60 ~~~C~~C~~~~~~-~~l~~h~~~~~~~~~   87 (148)
                      |-.|+.|+..+.. .+|+.|+++..+.+|
T Consensus        24 PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   24 PATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             -EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            5666777666665 666666665555544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=93.38  E-value=0.1  Score=28.07  Aligned_cols=10  Identities=30%  Similarity=0.806  Sum_probs=4.9

Q ss_pred             CccccccCCc
Q 032068           35 LERCKVCGDM   44 (148)
Q Consensus        35 ~~~C~~C~~~   44 (148)
                      .|.|+.|++.
T Consensus        27 ~F~CPnCGe~   36 (61)
T COG2888          27 KFPCPNCGEV   36 (61)
T ss_pred             EeeCCCCCce
Confidence            3455555543

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=93.36  E-value=0.043  Score=32.57  Aligned_cols=71  Identities=14%  Similarity=0.237  Sum_probs=20.0

Q ss_pred             cccccCCccChh-hHHHHHHcCCCCccCccchhccchHHHHhhHhhcCCCCcccCCCCCCCCC-hhhHHHHHHHh
Q 032068           37 RCKVCGDMVPRK-YAEEHFLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLP-AVDLAEHQVAI  109 (148)
Q Consensus        37 ~C~~C~~~f~~~-~l~~h~~~~h~~~~C~~C~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~~c  109 (148)
                      +|..|+..|... .+..|+...|. +..+..........+..+.+. .-...+.|..|++.|. ...|..|++.-
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~-~~~~~~~~l~~~~~~~~~~~~-~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHG-FDIPDQKYLVDPNRLLNYLRK-KVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             --------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccc-ccccccccccccccccccccc-ccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            488899998877 56677755553 111111111111333333322 2223689999999999 99999999863

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=92.90  E-value=0.036  Score=24.20  Aligned_cols=20  Identities=25%  Similarity=0.552  Sum_probs=12.0

Q ss_pred             ccCCCCCCCCC-hhhHHHHHH
Q 032068           88 VTCDFCEFPLP-AVDLAEHQV  107 (148)
Q Consensus        88 ~~C~~C~~~f~-~~~l~~H~~  107 (148)
                      |.|..|+..|. ...+..|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            34666666666 666666653

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=92.83  E-value=0.061  Score=24.10  Aligned_cols=20  Identities=20%  Similarity=0.448  Sum_probs=13.7

Q ss_pred             ccCccchhccch-HHHHhhHh
Q 032068           61 VACSQCSETMER-EILAIHKG   80 (148)
Q Consensus        61 ~~C~~C~~~~~~-~~l~~h~~   80 (148)
                      |.|..|++.|.. ..+..|+.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            567777777766 67777664

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=91.58  E-value=0.15  Score=21.94  Aligned_cols=21  Identities=19%  Similarity=0.523  Sum_probs=13.1

Q ss_pred             ccCCCCCCCCChhhHHHHHHH
Q 032068           88 VTCDFCEFPLPAVDLAEHQVA  108 (148)
Q Consensus        88 ~~C~~C~~~f~~~~l~~H~~~  108 (148)
                      |.|+.|+.......|..|++.
T Consensus         1 y~C~~C~y~t~~~~l~~H~~~   21 (24)
T PF13909_consen    1 YKCPHCSYSTSKSNLKRHLKR   21 (24)
T ss_dssp             EE-SSSS-EESHHHHHHHHHH
T ss_pred             CCCCCCCCcCCHHHHHHHHHh
Confidence            568888866555677887654

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=91.17  E-value=0.29  Score=21.83  Aligned_cols=21  Identities=19%  Similarity=0.354  Sum_probs=14.9

Q ss_pred             cCCCCCCCCChhhHHHHHHHh
Q 032068           89 TCDFCEFPLPAVDLAEHQVAI  109 (148)
Q Consensus        89 ~C~~C~~~f~~~~l~~H~~~c  109 (148)
                      .||.|++.+....+..|...|
T Consensus         3 ~CPiC~~~v~~~~in~HLD~C   23 (26)
T smart00734        3 QCPVCFREVPENLINSHLDSC   23 (26)
T ss_pred             cCCCCcCcccHHHHHHHHHHh
Confidence            577777777666777777655

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=90.98  E-value=0.33  Score=26.21  Aligned_cols=10  Identities=40%  Similarity=0.810  Sum_probs=5.7

Q ss_pred             CcccCCCCCC
Q 032068           86 RIVTCDFCEF   95 (148)
Q Consensus        86 ~~~~C~~C~~   95 (148)
                      .+|.|+.||+
T Consensus        47 ~~Y~CP~CGF   56 (59)
T PRK14890         47 NPYTCPKCGF   56 (59)
T ss_pred             CceECCCCCC
Confidence            4556666654

>smart00451 ZnF_U1 U1-like zinc finger

Probab=88.97  E-value=0.32  Score=22.92  Aligned_cols=21  Identities=14%  Similarity=0.485  Sum_probs=15.9

Q ss_pred             cccCCCCCCCCC-hhhHHHHHH
Q 032068           87 IVTCDFCEFPLP-AVDLAEHQV  107 (148)
Q Consensus        87 ~~~C~~C~~~f~-~~~l~~H~~  107 (148)
                      +|.|+.|+..|. ...+..|..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            467888888888 777777764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2186 consensus Cell growth-regulating nucleolar protein [Cell cycle control, cell division, chromosome partitioning]

Probab=88.65  E-value=0.25  Score=34.75  Aligned_cols=46  Identities=28%  Similarity=0.573  Sum_probs=34.0

Q ss_pred             CccccccCCccChhhHHHHHHcCCC-CccCccchhccchHHHHhhHh
Q 032068           35 LERCKVCGDMVPRKYAEEHFLNTHA-PVACSQCSETMEREILAIHKG   80 (148)
Q Consensus        35 ~~~C~~C~~~f~~~~l~~h~~~~h~-~~~C~~C~~~~~~~~l~~h~~   80 (148)
                      .|.|..|+.......+..|..+++. .|.|..|++.|.+..+..|..
T Consensus         3 ~FtCnvCgEsvKKp~vekH~srCrn~~fSCIDC~k~F~~~sYknH~k   49 (276)
T KOG2186|consen    3 FFTCNVCGESVKKPQVEKHMSRCRNAYFSCIDCGKTFERVSYKNHTK   49 (276)
T ss_pred             EEehhhhhhhccccchHHHHHhccCCeeEEeecccccccchhhhhhh
Confidence            3678888888777767667766653 778888888887766777764

>PF08209 Sgf11: Sgf11 (transcriptional regulation protein); InterPro: IPR013246 The Sgf11 family is a SAGA complex subunit in Saccharomyces cerevisiae (Baker's yeast)

Probab=87.77  E-value=0.4  Score=22.74  Aligned_cols=25  Identities=28%  Similarity=0.474  Sum_probs=18.4

Q ss_pred             cccCCCCCCCCChhhHHHHHHHhcc
Q 032068           87 IVTCDFCEFPLPAVDLAEHQVAIVN  111 (148)
Q Consensus        87 ~~~C~~C~~~f~~~~l~~H~~~c~~  111 (148)
                      .+.|+.|++.+..+-+..|+..|..
T Consensus         4 ~~~C~nC~R~v~a~RfA~HLekCmg   28 (33)
T PF08209_consen    4 YVECPNCGRPVAASRFAPHLEKCMG   28 (33)
T ss_dssp             EEE-TTTSSEEEGGGHHHHHHHHTC
T ss_pred             eEECCCCcCCcchhhhHHHHHHHHc
Confidence            4578888888877788888888743

The SAGA complex is a multisubunit protein complex involved in transcriptional regulation. SAGA combines proteins involved in interactions with DNA-bound activators and TATA-binding protein (TBP), as well as enzymes for histone acetylation and deubiquitylation [].; PDB: 3M99_B 2LO2_A 3MHH_C 3MHS_C.

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=86.38  E-value=0.68  Score=20.65  Aligned_cols=9  Identities=33%  Similarity=0.670  Sum_probs=5.3

Q ss_pred             cccccCCcc
Q 032068           37 RCKVCGDMV   45 (148)
Q Consensus        37 ~C~~C~~~f   45 (148)
                      .|+.||..|
T Consensus        16 ~Cp~CG~~F   24 (26)
T PF10571_consen   16 FCPHCGYDF   24 (26)
T ss_pred             cCCCCCCCC
Confidence            466666555

Several members are annotated as putative helicases.

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=81.57  E-value=0.95  Score=23.03  Aligned_cols=29  Identities=24%  Similarity=0.566  Sum_probs=16.3

Q ss_pred             cccCCCCCCCCC-cchHHHHHhhcCCCCccccccCCccC
Q 032068            9 TKICSHCDRAIP-SSNIDLHFAHCSRNLERCKVCGDMVP   46 (148)
Q Consensus         9 ~~~C~~C~~~~~-~~~l~~H~~~~~~~~~~C~~C~~~f~   46 (148)
                      .|.|+.|+..+. ...         .....|+.|+..+.
T Consensus         3 ~y~C~~CG~~~~~~~~---------~~~~~Cp~CG~~~~   32 (46)
T PRK00398          3 EYKCARCGREVELDEY---------GTGVRCPYCGYRIL   32 (46)
T ss_pred             EEECCCCCCEEEECCC---------CCceECCCCCCeEE
Confidence            467777777655 221         11456777765543

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=81.49  E-value=1.2  Score=27.33  Aligned_cols=13  Identities=23%  Similarity=0.925  Sum_probs=7.1

Q ss_pred             CccCccchhccch
Q 032068           60 PVACSQCSETMER   72 (148)
Q Consensus        60 ~~~C~~C~~~~~~   72 (148)
                      |..|++||..|..
T Consensus        26 PivCP~CG~~~~~   38 (108)
T PF09538_consen   26 PIVCPKCGTEFPP   38 (108)
T ss_pred             CccCCCCCCccCc
Confidence            5555555555543

The function of members of this family is unknown.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=81.03  E-value=1.2  Score=20.94  Aligned_cols=23  Identities=26%  Similarity=0.611  Sum_probs=12.9

Q ss_pred             ccCCCCCCCCC-cchHHHHHhhcCCCCccccccCC
Q 032068           10 KICSHCDRAIP-SSNIDLHFAHCSRNLERCKVCGD   43 (148)
Q Consensus        10 ~~C~~C~~~~~-~~~l~~H~~~~~~~~~~C~~C~~   43 (148)
                      |.|..||..+. ..           .+..||.|+.
T Consensus         2 ~~C~~CGy~y~~~~-----------~~~~CP~Cg~   25 (33)
T cd00350           2 YVCPVCGYIYDGEE-----------APWVCPVCGA   25 (33)
T ss_pred             EECCCCCCEECCCc-----------CCCcCcCCCC
Confidence            55666666543 21           3556666664

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=80.98  E-value=0.83  Score=22.11  Aligned_cols=11  Identities=18%  Similarity=0.670  Sum_probs=5.7

Q ss_pred             ccCCCCCCCCC
Q 032068           10 KICSHCDRAIP   20 (148)
Q Consensus        10 ~~C~~C~~~~~   20 (148)
                      +.|+.|+..|.
T Consensus         3 ~~CP~C~~~~~   13 (38)
T TIGR02098         3 IQCPNCKTSFR   13 (38)
T ss_pred             EECCCCCCEEE
Confidence            34555555544

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=80.27  E-value=0.47  Score=22.93  Aligned_cols=6  Identities=33%  Similarity=1.065  Sum_probs=2.3

Q ss_pred             cCCCCC
Q 032068           89 TCDFCE   94 (148)
Q Consensus        89 ~C~~C~   94 (148)
                      .|+.|+
T Consensus        27 ~C~~C~   32 (36)
T PF13717_consen   27 RCSKCG   32 (36)
T ss_pred             ECCCCC
Confidence            333333

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	148
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	5e-09
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	2e-04
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	2e-07
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	2e-06
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	7e-07
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	2e-04

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens} Length = 76

 Score = 49.2 bits (117), Expect = 5e-09
 Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 50  AEEHFLN-THAPVACS-QCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 106
           +  H    +   + C  +C   + R  L  H   +CP+R + C+FC           H+
Sbjct: 5   SSGHLNTCSFNVIPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEFCGCDFSGEAYESHE 63

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens} Length = 76

 Score = 36.8 bits (85), Expect = 2e-04
 Identities = 15/67 (22%), Positives = 21/67 (31%), Gaps = 4/67 (5%)

Query: 27 HFAHCSRNLERC-KVCGDMVPRKYAEEHFLNT--HAPVACSQCSETMEREILAIHKGENC 83
          H   CS N+  C   C   + R+    H  +      + C  C      E    H+   C
Sbjct: 8  HLNTCSFNVIPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEFCGCDFSGEAYESHE-GMC 66

Query: 84 PQRIVTC 90
          PQ     
Sbjct: 67 PQESSGP 73

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens} Length = 170

 Score = 47.0 bits (111), Expect = 2e-07
 Identities = 20/84 (23%), Positives = 31/84 (36%), Gaps = 3/84 (3%)

Query: 12  CSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNT--HAPVACSQCSET 69
              C   +   +++ H AHC   L  C  C     + +   H L       V+C  C+ +
Sbjct: 87  NEGCLHKMELRHLEDHQAHCEFALMDCPQCQRPFQKFHINIHILKDCPRRQVSCDNCAAS 146

Query: 70  MEREILAIHKGENCPQRIVTCDFC 93
           M  E   IH  +NCP  +      
Sbjct: 147 MAFEDKEIHD-QNCPLALEHHHHH 169

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens} Length = 170

 Score = 44.3 bits (104), Expect = 2e-06
 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 1/70 (1%)

Query: 38  CKVCGDMVPRKYAEEHFLN-THAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFP 96
            + C   +  ++ E+H  +   A + C QC    ++  + IH  ++CP+R V+CD C   
Sbjct: 87  NEGCLHKMELRHLEDHQAHCEFALMDCPQCQRPFQKFHINIHILKDCPRRQVSCDNCAAS 146

Query: 97  LPAVDLAEHQ 106
           +   D   H 
Sbjct: 147 MAFEDKEIHD 156

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 75

 Score = 43.4 bits (102), Expect = 7e-07
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 73  EILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 106
              + H+   CP R+  C  C+  L  + L EH+
Sbjct: 3   SGSSGHEETECPLRLAVCQHCDLELSILKLKEHE 36

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 75

 Score = 37.3 bits (86), Expect = 2e-04
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 12 CSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEH 53
          C HCD  +    +  H  +C    E C  CG  V  K  + H
Sbjct: 20 CQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLVKDLKTH 61

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	148
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.85
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.84
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.82
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.81
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.81
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.8
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.75
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.73
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.71
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.7
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.69
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.63
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.63
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.63
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.61
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.6
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.55
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.54
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.53
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.52
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.52
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.51
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.51
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.51
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.49
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.49
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.48
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.48
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.48
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.47
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.44
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.43
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.42
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.41
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.41
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.38
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.33
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.33
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.29
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.27
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.25
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.24
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.24
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.23
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.22
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.21
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.2
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.18
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.17
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.17
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.17
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.16
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.16
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.16
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.16
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.15
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.15
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.15
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.15
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.13
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.12
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.12
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.11
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.1
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.1
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.1
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.09
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.09
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.09
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.09
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.09
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.08
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.08
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.07
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.05
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.05
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.04
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.03
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.03
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.01
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.0
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.0
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	98.99
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.98
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.96
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.95
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.94
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	98.94
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.94
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.94
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.93
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.91
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.9
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.9
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.9
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.9
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.9
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.89
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.89
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.89
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.89
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.88
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.88
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.88
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.88
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	98.87
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.87
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.87
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.86
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.86
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.86
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.86
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.85
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.85
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.84
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	98.84
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.84
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.82
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.82
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.82
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.82
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.8
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.79
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.79
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.78
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	98.73
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.72
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.7
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.69
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.67
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.66
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.65
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.65
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.65
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.65
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.65
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.65
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.65
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.65
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.65
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.64
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.64
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.64
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.64
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.64
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.64
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.64
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.64
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.64
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.63
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.63
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.63
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.63
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.63
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.63
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.63
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.63
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.62
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.62
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.62
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.62
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.62
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.61
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.61
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.61
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.6
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.6
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.59
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.59
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.59
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.59
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.59
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.59
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.58
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.58
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.58
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.57
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.55
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.55
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.53
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.5
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.47
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.46
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.45
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.45
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.45
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.44
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.44
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.44
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.43
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.43
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.43
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.42
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.42
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.42
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.42
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.42
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.42
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.41
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.41
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.41
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.4
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.4
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.4
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.4
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.4
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.39
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.39
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.39
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.39
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.39
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.39
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.39
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.39
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.39
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.39
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.39
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.38
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.38
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.36
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.36
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.35
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.35
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.35
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.35
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.34
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.34
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.34
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.34
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.33
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.33
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.32
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.3
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.29
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.28
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.27
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.27
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.27
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.26
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.26
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.24
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.24
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.24
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	98.23
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.22
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.19
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.19
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.15
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.14
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.13
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.13
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.12
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.11
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.1
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.1
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.09
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.06
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.03
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.02
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.0
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.99
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.99
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.99
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.97
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.96
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.94
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	97.93
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.89
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.88
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.87
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.79
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.79
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.78
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.77
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.77
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.77
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.76
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.75
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.74
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.73
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.73
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	97.72
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.72
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.71
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.7
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.69
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.85
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	97.67
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.65
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.65
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.65
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.64
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.64
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.63
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.63
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.62
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.62
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.61
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.76
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.6
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.73
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.73
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	97.56
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.52
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.61
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.39
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.46
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.34
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	97.26
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.12
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	96.92
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.9
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.58
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.77
2yre_A	100	F-box only protein 30; zinc binding, E3 ubiquitin	95.07
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.89
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	94.64
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	93.72
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	93.64
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	93.5
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	91.93
2yre_A	100	F-box only protein 30; zinc binding, E3 ubiquitin	91.66
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	89.25
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	84.68
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	84.08
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	81.94
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	81.29
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	81.16

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=4.5e-21  Score=119.73  Aligned_cols=105  Identities=24%  Similarity=0.404  Sum_probs=95.1

Q ss_pred             cCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChh-hHHHHHHcC--C---CCccCccchhccch-HH
Q 032068            4 TSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRK-YAEEHFLNT--H---APVACSQCSETMER-EI   74 (148)
Q Consensus         4 h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~-~l~~h~~~~--h---~~~~C~~C~~~~~~-~~   74 (148)
                      .+++++|.|..|++.|. ...|..| +.|.+++++.|+.|++.|... .+..|....  +   .+|.|+.|++.|.. ..
T Consensus         2 s~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~   81 (124)
T 2dlq_A            2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRME   81 (124)
T ss_dssp             CCCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHH
T ss_pred             CCCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHH
Confidence            36789999999999999 9999999 699999999999999999988 677786532  2   48999999999988 99


Q ss_pred             HHhhHhhcCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           75 LAIHKGENCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        75 l~~h~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      |..|+++|.+++||.|+.|++.|. ...|..|++.
T Consensus        82 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  116 (124)
T 2dlq_A           82 LRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIK  116 (124)
T ss_dssp             HHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHH
T ss_pred             HHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHH
Confidence            999999999999999999999999 9999999874

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.84  E-value=1.3e-21  Score=130.87  Aligned_cols=104  Identities=20%  Similarity=0.450  Sum_probs=40.0

Q ss_pred             cCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChh-hHHHHHHcC--CCCccCccchhccch-HHHHh
Q 032068            4 TSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRK-YAEEHFLNT--HAPVACSQCSETMER-EILAI   77 (148)
Q Consensus         4 h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~-~l~~h~~~~--h~~~~C~~C~~~~~~-~~l~~   77 (148)
                      +.+++||.|..|++.|. ...|..| ..|.+++++.|+.|++.|... .+..|...-  .++|.|+.|++.|.. ..|..
T Consensus        16 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   95 (190)
T 2i13_A           16 EPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRA   95 (190)
T ss_dssp             ---------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHH
T ss_pred             cCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHH
Confidence            44455555555555555 5555555 344444555555555555444 233332110  024455555555544 44455


Q ss_pred             hHhhcCCCCcccCCCCCCCCC-hhhHHHHHH
Q 032068           78 HKGENCPQRIVTCDFCEFPLP-AVDLAEHQV  107 (148)
Q Consensus        78 h~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~  107 (148)
                      |++.|.++++|.|+.|++.|. ...|..|++
T Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  126 (190)
T 2i13_A           96 HQRTHTGEKPYACPECGKSFSQLAHLRAHQR  126 (190)
T ss_dssp             HHHHHHTCCCEECTTTCCEESSHHHHHHHHH
T ss_pred             HHHhcCCCCCCcCCCCCCccCCHHHHHHHHH
Confidence            554444445555555555544 444444444

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.82  E-value=4e-21  Score=128.51  Aligned_cols=121  Identities=17%  Similarity=0.405  Sum_probs=102.3

Q ss_pred             CccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChh-hHHHHHHcC--CCCccCccchhccch-HHH
Q 032068            2 AMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRK-YAEEHFLNT--HAPVACSQCSETMER-EIL   75 (148)
Q Consensus         2 ~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~-~l~~h~~~~--h~~~~C~~C~~~~~~-~~l   75 (148)
                      ++|.++++|.|..|++.|. ...|..| ..|.+++++.|+.|++.|... .+..|....  .++|.|+.|++.|.. ..|
T Consensus        42 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  121 (190)
T 2i13_A           42 RTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHL  121 (190)
T ss_dssp             GCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHH
T ss_pred             HHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHH
Confidence            5688999999999999999 9999999 699999999999999999987 566665321  158999999999988 999


Q ss_pred             HhhHhhcCCCCcccCCCCCCCCC-hhhHHHHHHH-----------hcccccCCcchhhh
Q 032068           76 AIHKGENCPQRIVTCDFCEFPLP-AVDLAEHQVA-----------IVNNFENGKTIADL  122 (148)
Q Consensus        76 ~~h~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~~-----------c~~~~~~~~~~~~~  122 (148)
                      ..|+++|.+++||.|+.|++.|. ...|..|+++           |++.|.....|...
T Consensus       122 ~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H  180 (190)
T 2i13_A          122 RAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVH  180 (190)
T ss_dssp             HHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             HHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHH
Confidence            99999999999999999999999 9999999986           67777766655543

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.81  E-value=3.2e-20  Score=115.08  Aligned_cols=104  Identities=19%  Similarity=0.448  Sum_probs=92.1

Q ss_pred             CCCCcccCCC--CCCCCC-cchHHHH-HhhcCCCCcccc--ccCCccChh-hHHHHHHcC--CCCccCccchhccch-HH
Q 032068            5 SDETTKICSH--CDRAIP-SSNIDLH-FAHCSRNLERCK--VCGDMVPRK-YAEEHFLNT--HAPVACSQCSETMER-EI   74 (148)
Q Consensus         5 ~~~~~~~C~~--C~~~~~-~~~l~~H-~~~~~~~~~~C~--~C~~~f~~~-~l~~h~~~~--h~~~~C~~C~~~~~~-~~   74 (148)
                      ++++||.|..  |++.|. ...|..| ..|.+.+++.|+  .|++.|... .|..|...-  .++|.|+.|++.|.. ..
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            6789999986  999999 9999999 699999999999  799999987 566665321  158999999999988 99


Q ss_pred             HHhhHhhcCCCCcccC--CCCCCCCC-hhhHHHHHHH
Q 032068           75 LAIHKGENCPQRIVTC--DFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        75 l~~h~~~~~~~~~~~C--~~C~~~f~-~~~l~~H~~~  108 (148)
                      |..|+++|.++++|.|  +.|++.|. ...|..|+++
T Consensus        82 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  118 (119)
T 2jp9_A           82 LKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNM  118 (119)
T ss_dssp             HHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHT
T ss_pred             HHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhc
Confidence            9999999999999999  78999999 9999999864

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.81  E-value=1.6e-20  Score=125.54  Aligned_cols=106  Identities=19%  Similarity=0.422  Sum_probs=79.5

Q ss_pred             ccCCCCcccC--CCCCCCCC-cchHHHH-HhhcCCCCcccc--ccCCccChh-hHHHHHHcCC----CCccC--ccchhc
Q 032068            3 MTSDETTKIC--SHCDRAIP-SSNIDLH-FAHCSRNLERCK--VCGDMVPRK-YAEEHFLNTH----APVAC--SQCSET   69 (148)
Q Consensus         3 ~h~~~~~~~C--~~C~~~~~-~~~l~~H-~~~~~~~~~~C~--~C~~~f~~~-~l~~h~~~~h----~~~~C--~~C~~~   69 (148)
                      +|++++||.|  ..|++.|. ...|..| +.|.+++++.|+  .|++.|... .|..|....|    .+|.|  +.|++.
T Consensus        36 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~  115 (190)
T 1tf6_A           36 KHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKA  115 (190)
T ss_dssp             HHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEE
T ss_pred             hcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccc
Confidence            4667777888  67888888 7778888 577777778887  788887777 5666654444    26777  778888


Q ss_pred             cch-HHHHhhHhhcCCCCcccCCC--CCCCCC-hhhHHHHHHH
Q 032068           70 MER-EILAIHKGENCPQRIVTCDF--CEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        70 ~~~-~~l~~h~~~~~~~~~~~C~~--C~~~f~-~~~l~~H~~~  108 (148)
                      |.. ..|..|+++|.+++||.|+.  |++.|. .+.|..|+++
T Consensus       116 f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~  158 (190)
T 1tf6_A          116 FKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV  158 (190)
T ss_dssp             CSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTS
T ss_pred             cCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHH
Confidence            876 77888888888888888876  888888 7788888764

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.80  E-value=1.4e-20  Score=119.37  Aligned_cols=96  Identities=18%  Similarity=0.338  Sum_probs=83.7

Q ss_pred             CccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChh-hHHHHHHcCC---CCccCccchhccch-HH
Q 032068            2 AMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRK-YAEEHFLNTH---APVACSQCSETMER-EI   74 (148)
Q Consensus         2 ~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~-~l~~h~~~~h---~~~~C~~C~~~~~~-~~   74 (148)
                      ++|.|+++|.|..|++.|. ...|..| ..|.++++|.|+.|++.|... .|..|. ..|   ++|.|+.|++.|.. +.
T Consensus        15 ~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C~k~F~~~~~   93 (133)
T 2lt7_A           15 LIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHE-IHHTGERRYQCLACGKSFINYQF   93 (133)
T ss_dssp             EEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHH-HHHHTCCCEEESSSCCEESSHHH
T ss_pred             eecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhc-cccCCCccccCCCCCCCcCCHHH
Confidence            4688999999999999999 9999999 699999999999999999988 566664 333   59999999999988 99


Q ss_pred             HHhhHhhcCCCC------cccCCCCCCCCC
Q 032068           75 LAIHKGENCPQR------IVTCDFCEFPLP   98 (148)
Q Consensus        75 l~~h~~~~~~~~------~~~C~~C~~~f~   98 (148)
                      |..|++++.+++      +|.|..|++.|.
T Consensus        94 L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~  123 (133)
T 2lt7_A           94 MSSHIKSVHSQDPSGDSKLYRLHPCRSLQI  123 (133)
T ss_dssp             HHHHHHHHTCCCTTSSSCCEEECCCCSSCC
T ss_pred             HHHHhHHhcCCCCCCCCCCeecCCCCchhh
Confidence            999999887664      588899998876

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.75  E-value=1.6e-18  Score=108.23  Aligned_cols=102  Identities=21%  Similarity=0.417  Sum_probs=88.1

Q ss_pred             CCCcccCC--CCCCCCC-cchHHHH-HhhcCCCCccccccCCccChh-hHHHHHHcCC---CCccCcc--chhccch-HH
Q 032068            6 DETTKICS--HCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRK-YAEEHFLNTH---APVACSQ--CSETMER-EI   74 (148)
Q Consensus         6 ~~~~~~C~--~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~-~l~~h~~~~h---~~~~C~~--C~~~~~~-~~   74 (148)
                      ++++|.|.  .|++.|. ...|..| ..| +.+++.|+.|++.|... .|..|. ..|   ++|.|..  |++.|.. ..
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~   79 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQ-LVHTGEKPFQCTFEGCGKRFSLDFN   79 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHG-GGTSCCCCEECCSTTCCCEESCHHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHH-HHcCCCCCeeCCCCCCcCccCCHHH
Confidence            46789998  8999999 9999999 678 88899999999999988 677775 444   4899975  9999988 99


Q ss_pred             HHhhHhhcCCCCcccCC--CCCCCCC-hhhHHHHHHHh
Q 032068           75 LAIHKGENCPQRIVTCD--FCEFPLP-AVDLAEHQVAI  109 (148)
Q Consensus        75 l~~h~~~~~~~~~~~C~--~C~~~f~-~~~l~~H~~~c  109 (148)
                      |..|+++|.++++|.|+  .|++.|. .+.|..|+++.
T Consensus        80 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  117 (124)
T 1ubd_C           80 LRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH  117 (124)
T ss_dssp             HHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             HHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHH
Confidence            99999999999999996  4999999 99999999864

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=1.2e-17  Score=108.03  Aligned_cols=105  Identities=17%  Similarity=0.371  Sum_probs=54.0

Q ss_pred             ccCCCCcccCCC-----CCCCCC-cchHHHH-HhhcCCCCccccc--cCCccChh-hHHHHHHcCC--CCccCcc--chh
Q 032068            3 MTSDETTKICSH-----CDRAIP-SSNIDLH-FAHCSRNLERCKV--CGDMVPRK-YAEEHFLNTH--APVACSQ--CSE   68 (148)
Q Consensus         3 ~h~~~~~~~C~~-----C~~~~~-~~~l~~H-~~~~~~~~~~C~~--C~~~f~~~-~l~~h~~~~h--~~~~C~~--C~~   68 (148)
                      +|.++++|.|..     |++.|. ...|..| +.|.+++++.|+.  |++.|... .|..|...-.  ++|.|+.  |++
T Consensus        28 ~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~  107 (155)
T 2gli_A           28 IHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSK  107 (155)
T ss_dssp             SSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCC
T ss_pred             cCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCC
Confidence            344555555542     225555 5555555 4555555555553  55555554 3444432211  2555554  555


Q ss_pred             ccch-HHHHhhH-hhcCCCCcccCCC--CCCCCC-hhhHHHHHH
Q 032068           69 TMER-EILAIHK-GENCPQRIVTCDF--CEFPLP-AVDLAEHQV  107 (148)
Q Consensus        69 ~~~~-~~l~~h~-~~~~~~~~~~C~~--C~~~f~-~~~l~~H~~  107 (148)
                      .|.. ..|..|+ +.|.+++||.|+.  |++.|. .+.|..|++
T Consensus       108 ~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~  151 (155)
T 2gli_A          108 AFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVK  151 (155)
T ss_dssp             EESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHH
Confidence            5554 5555555 4555555555555  555555 555555554

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.71  E-value=1.5e-17  Score=107.60  Aligned_cols=106  Identities=23%  Similarity=0.431  Sum_probs=90.0

Q ss_pred             ccCCCCcccCCCCCCCCC-cchHHHH-Hh-hcCCCC--------ccccccCCccChh-hHHHHHHcC--CCCccCcc--c
Q 032068            3 MTSDETTKICSHCDRAIP-SSNIDLH-FA-HCSRNL--------ERCKVCGDMVPRK-YAEEHFLNT--HAPVACSQ--C   66 (148)
Q Consensus         3 ~h~~~~~~~C~~C~~~~~-~~~l~~H-~~-~~~~~~--------~~C~~C~~~f~~~-~l~~h~~~~--h~~~~C~~--C   66 (148)
                      ++.++.+|.|..|++.|. ...|..| .. |.+..+        +.|+.|++.|... .|..|+...  .++|.|..  |
T Consensus        19 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C   98 (155)
T 2rpc_A           19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGC   98 (155)
T ss_dssp             CCTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTT
T ss_pred             echhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCC
Confidence            345678899999999999 9999999 55 777654        7899999999987 566564321  15899987  9


Q ss_pred             hhccch-HHHHhhHhhcCCCCcccCCC--CCCCCC-hhhHHHHHHH
Q 032068           67 SETMER-EILAIHKGENCPQRIVTCDF--CEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        67 ~~~~~~-~~l~~h~~~~~~~~~~~C~~--C~~~f~-~~~l~~H~~~  108 (148)
                      ++.|.. ..|..|+++|.++++|.|+.  |++.|. ...|..|+++
T Consensus        99 ~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~  144 (155)
T 2rpc_A           99 GKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHV  144 (155)
T ss_dssp             CCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTT
T ss_pred             CCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHH
Confidence            999988 99999999999999999997  999999 9999999875

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.70  E-value=3.2e-17  Score=109.41  Aligned_cols=120  Identities=17%  Similarity=0.258  Sum_probs=99.6

Q ss_pred             ccCCCCcccC--CCCCCCCC-cchHHHH-HhhcCCCCccc--cccCCccChh-hHHHHHHcCC---CCccCc--cchhcc
Q 032068            3 MTSDETTKIC--SHCDRAIP-SSNIDLH-FAHCSRNLERC--KVCGDMVPRK-YAEEHFLNTH---APVACS--QCSETM   70 (148)
Q Consensus         3 ~h~~~~~~~C--~~C~~~~~-~~~l~~H-~~~~~~~~~~C--~~C~~~f~~~-~l~~h~~~~h---~~~~C~--~C~~~~   70 (148)
                      ...++++|.|  ..|++.|. ...|..| ..|.+++++.|  +.|++.|... .|..|. ..|   ++|.|+  .|++.|
T Consensus         6 ~~~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f   84 (190)
T 1tf6_A            6 LPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHS-LTHTGEKNFTCDSDGCDLRF   84 (190)
T ss_dssp             ----CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHH-TTTTTCCCEECCSSSCCCEE
T ss_pred             ccCCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHH-HHccCCCceeCCCCCCCCcc
Confidence            3456789999  68999999 9999999 69999999999  8899999988 677776 444   489999  899999


Q ss_pred             ch-HHHHhhH-hhc-CCCCcccC--CCCCCCCC-hhhHHHHHHH-------------hcccccCCcchhhhh
Q 032068           71 ER-EILAIHK-GEN-CPQRIVTC--DFCEFPLP-AVDLAEHQVA-------------IVNNFENGKTIADLS  123 (148)
Q Consensus        71 ~~-~~l~~h~-~~~-~~~~~~~C--~~C~~~f~-~~~l~~H~~~-------------c~~~~~~~~~~~~~~  123 (148)
                      .. ..|..|+ +.| .++++|.|  +.|++.|. ...|..|+++             |++.|...+.|....
T Consensus        85 ~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~  156 (190)
T 1tf6_A           85 TTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHE  156 (190)
T ss_dssp             SCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHH
T ss_pred             CCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHH
Confidence            88 9999999 667 47889999  88999999 9999999874             677777776665543

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=4.4e-17  Score=105.28  Aligned_cols=101  Identities=22%  Similarity=0.317  Sum_probs=84.5

Q ss_pred             CCcccCCCCCCCCC-cchHHHH-H---hhcCCCCcccccc-----CCccChh-hHHHHHHcC--CCCccCcc--chhccc
Q 032068            7 ETTKICSHCDRAIP-SSNIDLH-F---AHCSRNLERCKVC-----GDMVPRK-YAEEHFLNT--HAPVACSQ--CSETME   71 (148)
Q Consensus         7 ~~~~~C~~C~~~~~-~~~l~~H-~---~~~~~~~~~C~~C-----~~~f~~~-~l~~h~~~~--h~~~~C~~--C~~~~~   71 (148)
                      |.++.|..|++.|. ...|..| .   .|.+.+++.|+.|     ++.|... .|..|...-  .++|.|+.  |++.|.
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~   80 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYS   80 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCS
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCccc
Confidence            46899999999999 9999999 5   4778889988753     4788877 555564221  15899984  999998


Q ss_pred             h-HHHHhhHhhcCCCCcccCCC--CCCCCC-hhhHHHHHH
Q 032068           72 R-EILAIHKGENCPQRIVTCDF--CEFPLP-AVDLAEHQV  107 (148)
Q Consensus        72 ~-~~l~~h~~~~~~~~~~~C~~--C~~~f~-~~~l~~H~~  107 (148)
                      . ..|..|+++|.++++|.|+.  |++.|. .+.|..|++
T Consensus        81 ~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~  120 (155)
T 2gli_A           81 RLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN  120 (155)
T ss_dssp             SHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHH
T ss_pred             CHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHH
Confidence            8 99999999999999999998  999999 999999983

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.63  E-value=3.6e-16  Score=95.18  Aligned_cols=88  Identities=15%  Similarity=0.231  Sum_probs=71.7

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChh-hHHHHHHcCC---CCccCccchhccch-H
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRK-YAEEHFLNTH---APVACSQCSETMER-E   73 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~-~l~~h~~~~h---~~~~C~~C~~~~~~-~   73 (148)
                      +++|+++++|.|..|++.|. ...|..| +.|  .+++.|+.|++.|... .|..|. . |   ++|.|..|++.|.. .
T Consensus         8 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~-~-H~~~~~~~C~~C~~~f~~~~   83 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHE-S-KCEYKKLTCLECMRTFKSSF   83 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHH-H-HCSTGGGEEGGGTEECSSHH
T ss_pred             CcccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHH-H-cCCCCCccCccccchhCCHH
Confidence            46789999999999999999 9999999 577  3588899999998877 566665 3 3   37889889988877 8


Q ss_pred             HHHhhHh-hcCCCCcccCCC
Q 032068           74 ILAIHKG-ENCPQRIVTCDF   92 (148)
Q Consensus        74 ~l~~h~~-~~~~~~~~~C~~   92 (148)
                      .|..|++ .|.++++|.+..
T Consensus        84 ~L~~H~~~~H~~~~~~~~~~  103 (107)
T 1wjp_A           84 SIWRHQVEVHNQNNMAPTSG  103 (107)
T ss_dssp             HHHHHHHHTSCCCCCCCCCC
T ss_pred             HHHHHHHHHcCCCCCCCCCC
Confidence            8888886 888888887653

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.63  E-value=1.9e-17  Score=104.95  Aligned_cols=81  Identities=20%  Similarity=0.276  Sum_probs=72.3

Q ss_pred             HhhcCCCCccccccCCccChh-hHHHHHHcCC---CCccCccchhccch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhh
Q 032068           28 FAHCSRNLERCKVCGDMVPRK-YAEEHFLNTH---APVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVD  101 (148)
Q Consensus        28 ~~~~~~~~~~C~~C~~~f~~~-~l~~h~~~~h---~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~  101 (148)
                      ..+.|+++|.|+.|++.|... .|..|+ ..|   ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|++.|. .+.
T Consensus        15 ~~h~Gek~y~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~   93 (133)
T 2lt7_A           15 LIVDGRVYYICIVCKRSYVCLTSLRRHF-NIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQF   93 (133)
T ss_dssp             EEETTEEEEEETTTCCEESCHHHHHHHH-HHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHH
T ss_pred             eecCCCcCeECCCCCCCcCCHHHHHHHH-HHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHH
Confidence            478899999999999999988 566665 333   59999999999988 99999999999999999999999999 999


Q ss_pred             HHHHHHHh
Q 032068          102 LAEHQVAI  109 (148)
Q Consensus       102 l~~H~~~c  109 (148)
                      |..|+++.
T Consensus        94 L~~H~~~h  101 (133)
T 2lt7_A           94 MSSHIKSV  101 (133)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHhHHh
Confidence            99999864

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.63  E-value=1.8e-15  Score=91.83  Aligned_cols=85  Identities=25%  Similarity=0.491  Sum_probs=63.0

Q ss_pred             cCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChh-hHHHHHHcCC---CCccCccchhccch-HHHH
Q 032068            4 TSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRK-YAEEHFLNTH---APVACSQCSETMER-EILA   76 (148)
Q Consensus         4 h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~-~l~~h~~~~h---~~~~C~~C~~~~~~-~~l~   76 (148)
                      ..++++|.|..|++.|. ...|..| +.|.+++++.|+.|++.|... .+..|. ..|   ++|.|..|++.|.. ..|.
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~L~   90 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHR-YIHSKEKPFKCQECGKGFCQSRTLA   90 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHG-GGSCCCCTTSCSSSCCCCSSHHHHH
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHH-HHhCCCCCeECCCcCCcccCHHHHH
Confidence            35677889999999998 8888888 688888888888888888766 455554 333   36777777777766 6777


Q ss_pred             hhHhhcCCCCccc
Q 032068           77 IHKGENCPQRIVT   89 (148)
Q Consensus        77 ~h~~~~~~~~~~~   89 (148)
                      .|+++|.+++||.
T Consensus        91 ~H~~~H~~~~~~~  103 (106)
T 2ee8_A           91 VHKTLHMQTSSPT  103 (106)
T ss_dssp             HHHHHTTSCCCCC
T ss_pred             HHHHHhCCCCCCc
Confidence            7777777777664

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=7.6e-16  Score=94.11  Aligned_cols=86  Identities=16%  Similarity=0.321  Sum_probs=66.0

Q ss_pred             CccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChhhHHHHHHcCCCCccCccchhccch-HHHHhh
Q 032068            2 AMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMER-EILAIH   78 (148)
Q Consensus         2 ~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~~l~~h~~~~h~~~~C~~C~~~~~~-~~l~~h   78 (148)
                      .+|+++++|.| .|++.|. ...|..| +.|.+++++                         .|+.|++.|.. ..|..|
T Consensus         3 ~~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~-------------------------~C~~C~~~f~~~~~l~~H   56 (110)
T 2csh_A            3 SGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPY-------------------------GCGVCGKKFKMKHHLVGH   56 (110)
T ss_dssp             CCCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSE-------------------------ECTTTSCEESSSHHHHHH
T ss_pred             CCCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCc-------------------------cCCCCCcccCCHHHHHHH
Confidence            36888888999 8999888 8888888 567665444                         45555555555 566677


Q ss_pred             HhhcCCCCcccCCCCCCCCC-hhhHHHHHHHhcccc
Q 032068           79 KGENCPQRIVTCDFCEFPLP-AVDLAEHQVAIVNNF  113 (148)
Q Consensus        79 ~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~~c~~~~  113 (148)
                      +++|.++++|.|+.|++.|. ...|..|++.+.+.+
T Consensus        57 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~   92 (110)
T 2csh_A           57 MKIHTGIKPYECNICAKRFMWRDSFHRHVTSCTKSY   92 (110)
T ss_dssp             HTTTCCCCCEECSSSCCEESCHHHHHHHHHHHHHHH
T ss_pred             HHHcCCCCCeeCCCCcchhcCHHHHHHHHHHccccc
Confidence            77788889999999999999 899999998865544

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.60  E-value=2e-15  Score=89.99  Aligned_cols=85  Identities=15%  Similarity=0.347  Sum_probs=58.9

Q ss_pred             ccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChh-hHHHHHHcCC--CCccCccchhccch-HHHH
Q 032068            3 MTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRK-YAEEHFLNTH--APVACSQCSETMER-EILA   76 (148)
Q Consensus         3 ~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~-~l~~h~~~~h--~~~~C~~C~~~~~~-~~l~   76 (148)
                      ++.+++||.|..|++.|. ...|..| +.|.+++++.|+.|++.|... .+..|+....  ++|.|+.|++.|.. ..|.
T Consensus         2 s~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   81 (96)
T 2dmd_A            2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLT   81 (96)
T ss_dssp             CCCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHH
Confidence            467788899999999998 8888888 678777777777777777666 4555543211  25666666666655 6666


Q ss_pred             hhHhhcCCCCc
Q 032068           77 IHKGENCPQRI   87 (148)
Q Consensus        77 ~h~~~~~~~~~   87 (148)
                      .|+++|.++++
T Consensus        82 ~H~~~h~~~~~   92 (96)
T 2dmd_A           82 VHLRSHTGDSG   92 (96)
T ss_dssp             HHHTTCCSCCC
T ss_pred             HHHHHhcCCCC
Confidence            66666665543

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.55  E-value=3.3e-15  Score=87.91  Aligned_cols=80  Identities=24%  Similarity=0.450  Sum_probs=46.8

Q ss_pred             CCCcccCC--CCCCCCC-cchHHHH-HhhcCCCCccccccCCccChh-hHHHHHHcC--CCCccCccchhccch-HHHHh
Q 032068            6 DETTKICS--HCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRK-YAEEHFLNT--HAPVACSQCSETMER-EILAI   77 (148)
Q Consensus         6 ~~~~~~C~--~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~-~l~~h~~~~--h~~~~C~~C~~~~~~-~~l~~   77 (148)
                      |++||.|.  .|++.|. ...|..| ..|.+.+++.|+.|++.|... .+..|...-  .++|.|+.|++.|.. ..|..
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            46788887  6888888 8888888 577777677777666666655 333333110  024555555555544 55555


Q ss_pred             hHhhcCCC
Q 032068           78 HKGENCPQ   85 (148)
Q Consensus        78 h~~~~~~~   85 (148)
                      |+++|.++
T Consensus        81 H~~~H~~~   88 (90)
T 1a1h_A           81 HTKIHLRQ   88 (90)
T ss_dssp             HHGGGGC-
T ss_pred             HHHHhccc
Confidence            55555443

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=5.8e-16  Score=95.36  Aligned_cols=81  Identities=20%  Similarity=0.316  Sum_probs=52.2

Q ss_pred             hhcCCCCccccccCCccChh-hHHHHHHcC-C---C-CccCccchhcc--ch-HHHHhhHhhcCCCCcccCCCCCCCCC-
Q 032068           29 AHCSRNLERCKVCGDMVPRK-YAEEHFLNT-H---A-PVACSQCSETM--ER-EILAIHKGENCPQRIVTCDFCEFPLP-   98 (148)
Q Consensus        29 ~~~~~~~~~C~~C~~~f~~~-~l~~h~~~~-h---~-~~~C~~C~~~~--~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-   98 (148)
                      .|.++++|.|+.|++.|... .|..|.... +   . .+.|..|++.|  .. ..|..|+++|.+++||.|+.|++.|. 
T Consensus        13 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~   92 (115)
T 2dmi_A           13 IFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFES   92 (115)
T ss_dssp             CCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSS
T ss_pred             eeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCC
Confidence            44444444444444444444 333333210 1   1 23477777777  55 67788888888999999999999999 


Q ss_pred             hhhHHHHHHHh
Q 032068           99 AVDLAEHQVAI  109 (148)
Q Consensus        99 ~~~l~~H~~~c  109 (148)
                      ...|..|+++.
T Consensus        93 ~~~L~~H~~~h  103 (115)
T 2dmi_A           93 LQDLSVHMIKT  103 (115)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHHHHHh
Confidence            88999998763

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.53  E-value=1e-14  Score=94.19  Aligned_cols=81  Identities=17%  Similarity=0.327  Sum_probs=72.9

Q ss_pred             ccCCCCCCCCC-cchHHHH-HhhcCCCCccccc--cCCccChh-hHHHHHHcCC---CCccCcc--chhccch-HHHHhh
Q 032068           10 KICSHCDRAIP-SSNIDLH-FAHCSRNLERCKV--CGDMVPRK-YAEEHFLNTH---APVACSQ--CSETMER-EILAIH   78 (148)
Q Consensus        10 ~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~--C~~~f~~~-~l~~h~~~~h---~~~~C~~--C~~~~~~-~~l~~h   78 (148)
                      |.|..|++.|. ...|..| +.|.+++++.|+.  |++.|... .|..|. ..|   ++|.|..  |++.|.. ..|..|
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~-~~h~~~~~~~C~~~~C~k~f~~~~~L~~H  141 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHK-RTHTGEKPFKCEFEGCDRRFANSSDRKKH  141 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHH-TTTCSSCSBCCSSTTCCCCBSSHHHHHHS
T ss_pred             cCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHH-HhhCCCCCccCCCCCCCCccCCHHHHHHH
Confidence            89999999999 9999999 7999999999998  99999988 677776 454   3899996  9999988 999999


Q ss_pred             HhhcCCCCcccCC
Q 032068           79 KGENCPQRIVTCD   91 (148)
Q Consensus        79 ~~~~~~~~~~~C~   91 (148)
                      +++|.+++||.|.
T Consensus       142 ~~~H~~~k~~~c~  154 (155)
T 2rpc_A          142 MHVHTSDKSGPSS  154 (155)
T ss_dssp             STTTTSCCCSCSC
T ss_pred             HHHhcCCCCCCCC
Confidence            9999999999885

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.52  E-value=1.2e-14  Score=86.51  Aligned_cols=77  Identities=25%  Similarity=0.519  Sum_probs=68.5

Q ss_pred             cCCCCccccccCCccChh-hHHHHHHcCC---CCccCccchhccch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhhHHH
Q 032068           31 CSRNLERCKVCGDMVPRK-YAEEHFLNTH---APVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDLAE  104 (148)
Q Consensus        31 ~~~~~~~C~~C~~~f~~~-~l~~h~~~~h---~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~l~~  104 (148)
                      .+++++.|+.|++.|... .|..|. ..|   ++|.|+.|++.|.. ..|..|+++|.++++|.|+.|++.|. ...|..
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHM-RCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHG-GGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHH-HhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHH
Confidence            467899999999999988 677775 444   48999999999988 99999999999999999999999999 999999


Q ss_pred             HHHH
Q 032068          105 HQVA  108 (148)
Q Consensus       105 H~~~  108 (148)
                      |+++
T Consensus        83 H~~~   86 (96)
T 2dmd_A           83 HLRS   86 (96)
T ss_dssp             HHTT
T ss_pred             HHHH
Confidence            9875

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.52  E-value=2.8e-15  Score=81.99  Aligned_cols=50  Identities=20%  Similarity=0.353  Sum_probs=45.7

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      +||.|..|++.|.. +.|..|+++|++++||.|+.|++.|. .+.|..|+++
T Consensus         3 Kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~   54 (60)
T 4gzn_C            3 RPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKV   54 (60)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGG
T ss_pred             CCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCc
Confidence            58999999999987 89999999999999999999999999 9999999875

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=8.3e-15  Score=90.12  Aligned_cols=89  Identities=17%  Similarity=0.218  Sum_probs=71.4

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-Hh--hcCCCCc-cccccCCcc--Chh-hHHHHHHcCC---CCccCccchhc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FA--HCSRNLE-RCKVCGDMV--PRK-YAEEHFLNTH---APVACSQCSET   69 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~--~~~~~~~-~C~~C~~~f--~~~-~l~~h~~~~h---~~~~C~~C~~~   69 (148)
                      +++|++++||.|..|++.|. ...|..| +.  +.+.+++ .|+.|++.|  ... .|..|. ..|   ++|.|+.|++.
T Consensus        11 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~-~~H~~~~~~~C~~C~k~   89 (115)
T 2dmi_A           11 GSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEME-GKEDAQKVLKCMYCGHS   89 (115)
T ss_dssp             CCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCC-CSCCCCSSCBCSSSCCB
T ss_pred             eeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHh-hccCCCcceECCCCCCc
Confidence            46899999999999999999 9999999 56  6666655 499999998  555 555553 444   49999999999


Q ss_pred             cch-HHHHhhHhhcCCCCcccC
Q 032068           70 MER-EILAIHKGENCPQRIVTC   90 (148)
Q Consensus        70 ~~~-~~l~~h~~~~~~~~~~~C   90 (148)
                      |.. ..|..|++++........
T Consensus        90 f~~~~~L~~H~~~hh~~~~~~~  111 (115)
T 2dmi_A           90 FESLQDLSVHMIKTKHYQKVSG  111 (115)
T ss_dssp             CSSHHHHHHHHHHTTTTTCSCC
T ss_pred             cCCHHHHHHHHHHhCCcccCCC
Confidence            988 999999988776654433

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.51  E-value=4.7e-14  Score=85.44  Aligned_cols=78  Identities=21%  Similarity=0.360  Sum_probs=68.1

Q ss_pred             CCCCccccccCCccChh-hHHHHHHcCC--CCccCccchhccch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhhHHHHH
Q 032068           32 SRNLERCKVCGDMVPRK-YAEEHFLNTH--APVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDLAEHQ  106 (148)
Q Consensus        32 ~~~~~~C~~C~~~f~~~-~l~~h~~~~h--~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~l~~H~  106 (148)
                      .++++.|+.|++.|... .+..|.....  ++|.|..|++.|.. ..|..|+++|.++++|.|+.|++.|. ...|..|+
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~   93 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHK   93 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHH
Confidence            46789999999999988 5666753322  48999999999988 99999999999999999999999999 99999999


Q ss_pred             HHh
Q 032068          107 VAI  109 (148)
Q Consensus       107 ~~c  109 (148)
                      ++.
T Consensus        94 ~~H   96 (106)
T 2ee8_A           94 TLH   96 (106)
T ss_dssp             HHT
T ss_pred             HHh
Confidence            874

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.51  E-value=2.2e-14  Score=85.23  Aligned_cols=79  Identities=20%  Similarity=0.394  Sum_probs=50.7

Q ss_pred             CCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChhhHHHHHHcCCCCccCccchhccchHHHHhhHhhc
Q 032068            5 SDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGEN   82 (148)
Q Consensus         5 ~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~~l~~h~~~~h~~~~C~~C~~~~~~~~l~~h~~~~   82 (148)
                      +++++|.|..|++.|. ...|..| ..|.+++++.|+.|++.|...                        ..|..|++.|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~------------------------~~l~~H~~~h   58 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRK------------------------DRMSYHVRSH   58 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCH------------------------HHHHHHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCH------------------------HHHHHHHHHh
Confidence            5677788888888887 7777777 566665555555555555443                        4445555555


Q ss_pred             CCC--CcccCCCCCCCCC-hhhHHHHHH
Q 032068           83 CPQ--RIVTCDFCEFPLP-AVDLAEHQV  107 (148)
Q Consensus        83 ~~~--~~~~C~~C~~~f~-~~~l~~H~~  107 (148)
                      .++  ++|.|+.|++.|. ...|..|++
T Consensus        59 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~   86 (95)
T 2yt9_A           59 DGSVGKPYICQSCGKGFSRPDHLNGHIK   86 (95)
T ss_dssp             CCCCCSSBCCSSSCCCBSSHHHHHHHHH
T ss_pred             cCCCCCceECCCccchhCCHHHHHHHHH
Confidence            554  6666666666666 666666654

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.49  E-value=4.3e-14  Score=87.75  Aligned_cols=97  Identities=22%  Similarity=0.382  Sum_probs=78.4

Q ss_pred             cCCCCccccccCCccChh-hHHHHHHcCC--CCccCccchhccch-HHHHhhHhh---cCCCCcccCCCCCCCCC-hhhH
Q 032068           31 CSRNLERCKVCGDMVPRK-YAEEHFLNTH--APVACSQCSETMER-EILAIHKGE---NCPQRIVTCDFCEFPLP-AVDL  102 (148)
Q Consensus        31 ~~~~~~~C~~C~~~f~~~-~l~~h~~~~h--~~~~C~~C~~~~~~-~~l~~h~~~---~~~~~~~~C~~C~~~f~-~~~l  102 (148)
                      .+.+++.|+.|++.|... .|..|...-.  ++|.|+.|++.|.. ..|..|+..   +.++++|.|+.|++.|. ...|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            467799999999999988 5666753322  49999999999988 999999975   57889999999999999 9999


Q ss_pred             HHHHHH-----------hcccccCCcchhhhhhhcc
Q 032068          103 AEHQVA-----------IVNNFENGKTIADLSYLGV  127 (148)
Q Consensus       103 ~~H~~~-----------c~~~~~~~~~~~~~~~~~~  127 (148)
                      ..|+++           |++.|.....|.......|
T Consensus        83 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  118 (124)
T 2dlq_A           83 RLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH  118 (124)
T ss_dssp             HHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             HHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHC
Confidence            999986           7777777666666544434

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.49  E-value=5.9e-14  Score=83.32  Aligned_cols=50  Identities=20%  Similarity=0.387  Sum_probs=46.8

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      ++|.|..|++.|.. ..|..|+++|.++++|.|+.|++.|. ...|..|+++
T Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   57 (95)
T 2yt9_A            6 SGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRS   57 (95)
T ss_dssp             SCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHH
Confidence            48999999999988 99999999999999999999999999 9999999876

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.48  E-value=1.3e-14  Score=88.17  Aligned_cols=78  Identities=19%  Similarity=0.375  Sum_probs=67.9

Q ss_pred             hhcCCCCccccccCCccChh-hHHHHHHcCCCCccCccchhccch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhhHHHH
Q 032068           29 AHCSRNLERCKVCGDMVPRK-YAEEHFLNTHAPVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDLAEH  105 (148)
Q Consensus        29 ~~~~~~~~~C~~C~~~f~~~-~l~~h~~~~h~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~l~~H  105 (148)
                      .|.+++++.|+.|++.|... .|..|...-.++|.|..|++.|.. ..|..|+. |.+++||.|+.|++.|. ...|..|
T Consensus        10 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H   88 (107)
T 1wjp_A           10 PVENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRH   88 (107)
T ss_dssp             CCCCCCCCBCTTTCCBCSSHHHHHHHHHHHHHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHH
T ss_pred             ccCCCcCeECCCCCCccCCHHHHHHHHHHCCCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHH
Confidence            56788999999999999988 566665321258999999999988 89999995 99999999999999999 9999999


Q ss_pred             HH
Q 032068          106 QV  107 (148)
Q Consensus       106 ~~  107 (148)
                      ++
T Consensus        89 ~~   90 (107)
T 1wjp_A           89 QV   90 (107)
T ss_dssp             HH
T ss_pred             HH
Confidence            97

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.48  E-value=2.5e-14  Score=82.57  Aligned_cols=75  Identities=17%  Similarity=0.398  Sum_probs=47.8

Q ss_pred             cccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChhhHHHHHHcCCCCccCccchhccch-HHHHhhHhhcCCC
Q 032068            9 TKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMER-EILAIHKGENCPQ   85 (148)
Q Consensus         9 ~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~~l~~h~~~~h~~~~C~~C~~~~~~-~~l~~h~~~~~~~   85 (148)
                      ||.|..|++.|. ...|..| +.|.++++                         |.|+.|++.|.. ..|..|++.|.++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-------------------------~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRP-------------------------YPCQYCGKRFHQKSDMKKHTFIHTGE   55 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCC-------------------------EECSSSCCEESSHHHHHHHHHHHHTC
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCC-------------------------eeCCcCChhhCCHHHHHHHHHHhcCC
Confidence            456666666666 6666666 45555444                         455555555544 5566666666677


Q ss_pred             CcccCCCCCCCCC-hhhHHHHHHH
Q 032068           86 RIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        86 ~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      ++|.|+.|++.|. .+.|..|+++
T Consensus        56 ~~~~C~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A           56 KPHKCQVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             CCEECTTTSCEESSHHHHHHHHHH
T ss_pred             CCCcCCCcchhhCChHHHHHHHHh
Confidence            7777777777777 7777777654

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.48  E-value=2.8e-14  Score=82.39  Aligned_cols=53  Identities=25%  Similarity=0.540  Sum_probs=45.4

Q ss_pred             CccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChh-hHHHHH
Q 032068            2 AMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRK-YAEEHF   54 (148)
Q Consensus         2 ~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~-~l~~h~   54 (148)
                      ++|.++++|.|..|++.|. ...|..| ..|.+++++.|+.|++.|... .+..|+
T Consensus        22 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   77 (82)
T 2kmk_A           22 LIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHS   77 (82)
T ss_dssp             HHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHH
T ss_pred             HHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHH
Confidence            3577899999999999999 9999999 689998889999998888877 555564

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.47  E-value=2.7e-14  Score=83.93  Aligned_cols=77  Identities=17%  Similarity=0.377  Sum_probs=65.0

Q ss_pred             CCCCcccc--ccCCccChh-hHHHHHHcC--CCCccCccchhccch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhhHHH
Q 032068           32 SRNLERCK--VCGDMVPRK-YAEEHFLNT--HAPVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDLAE  104 (148)
Q Consensus        32 ~~~~~~C~--~C~~~f~~~-~l~~h~~~~--h~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~l~~  104 (148)
                      +++++.|+  .|++.|... .+..|...-  .++|.|+.|++.|.. ..|..|+++|.++++|.|+.|++.|. .+.|..
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            35789998  699999988 566665321  258999999999988 99999999999999999999999999 999999


Q ss_pred             HHHH
Q 032068          105 HQVA  108 (148)
Q Consensus       105 H~~~  108 (148)
                      |+++
T Consensus        81 H~~~   84 (90)
T 1a1h_A           81 HTKI   84 (90)
T ss_dssp             HHGG
T ss_pred             HHHH
Confidence            9875

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.44  E-value=3.6e-14  Score=88.28  Aligned_cols=86  Identities=19%  Similarity=0.404  Sum_probs=69.1

Q ss_pred             CccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccc--cCCccChh-hHHHHHHcC--CCCccCc--cchhccch
Q 032068            2 AMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKV--CGDMVPRK-YAEEHFLNT--HAPVACS--QCSETMER   72 (148)
Q Consensus         2 ~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~--C~~~f~~~-~l~~h~~~~--h~~~~C~--~C~~~~~~   72 (148)
                      ++| ++++|.|..|++.|. ...|..| ..|.+++++.|+.  |++.|... .+..|...-  .++|.|+  .|++.|..
T Consensus        28 ~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~  106 (124)
T 1ubd_C           28 HTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQ  106 (124)
T ss_dssp             GGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSS
T ss_pred             HHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCC
Confidence            356 788999999999999 9999999 6999999999985  99999987 566665321  1589995  59999988


Q ss_pred             -HHHHhhHhhcCCCCcc
Q 032068           73 -EILAIHKGENCPQRIV   88 (148)
Q Consensus        73 -~~l~~h~~~~~~~~~~   88 (148)
                       ..|..|+++|.+++++
T Consensus       107 ~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C          107 STNLKSHILTHAKAKNN  123 (124)
T ss_dssp             TTTTHHHHHHHC-----
T ss_pred             HHHHHHHHHHHcccccC
Confidence             9999999999998875

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.43  E-value=3.5e-13  Score=80.59  Aligned_cols=79  Identities=20%  Similarity=0.402  Sum_probs=53.0

Q ss_pred             CCcccCCC--CCCCCC-cchHHHH-HhhcCCCCccccccCCccChhhHHHHHHcCCCCccCccchhccch-HHHHhhHhh
Q 032068            7 ETTKICSH--CDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMER-EILAIHKGE   81 (148)
Q Consensus         7 ~~~~~C~~--C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~~l~~h~~~~h~~~~C~~C~~~~~~-~~l~~h~~~   81 (148)
                      +++|.|..  |++.|. ...|..| +.|.+++++.|+.                       ..|++.|.. ..|..|+++
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~-----------------------~~C~~~f~~~~~l~~H~~~   69 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTW-----------------------EGCDWRFARSDELTRHYRK   69 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCS-----------------------SSCCCEESSHHHHHHHHHH
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCC-----------------------CCCCCccCCHHHHHHHHHH
Confidence            44566653  666666 6666666 4555544444431                       246666655 667777778


Q ss_pred             cCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           82 NCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        82 ~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      |.++++|.|+.|++.|. ...|..|+++
T Consensus        70 h~~~~~~~C~~C~~~f~~~~~l~~H~~~   97 (100)
T 2ebt_A           70 HTGAKPFQCGVCNRSFSRSDHLALHMKR   97 (100)
T ss_dssp             HTSCCSCBCSSSCCBCSSHHHHHHHHHH
T ss_pred             hCCCCCeECCCCcCccCCHHHHHHHHHH
Confidence            88888888888888888 8888888765

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.42  E-value=4.9e-14  Score=86.93  Aligned_cols=81  Identities=22%  Similarity=0.471  Sum_probs=68.9

Q ss_pred             CccCCCCcccCC--CCCCCCC-cchHHHH-HhhcCCCCccccccCCccChh-hHHHHHHcC--CCCccC--ccchhccch
Q 032068            2 AMTSDETTKICS--HCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRK-YAEEHFLNT--HAPVAC--SQCSETMER   72 (148)
Q Consensus         2 ~~h~~~~~~~C~--~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~-~l~~h~~~~--h~~~~C--~~C~~~~~~   72 (148)
                      ++|.++++|.|.  .|++.|. ...|..| +.|.+++++.|+.|++.|... .|..|...-  .++|.|  +.|++.|..
T Consensus        29 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~  108 (119)
T 2jp9_A           29 RKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFAR  108 (119)
T ss_dssp             HHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESS
T ss_pred             HhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCC
Confidence            357789999999  7999999 9999999 699999999999999999988 566664321  158999  899999988


Q ss_pred             -HHHHhhHhhc
Q 032068           73 -EILAIHKGEN   82 (148)
Q Consensus        73 -~~l~~h~~~~   82 (148)
                       ..|..|+++|
T Consensus       109 ~~~L~~H~~~H  119 (119)
T 2jp9_A          109 SDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHTC
T ss_pred             HHHHHHHHhcC
Confidence             9999998764

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.41  E-value=3.2e-14  Score=83.55  Aligned_cols=75  Identities=20%  Similarity=0.330  Sum_probs=58.9

Q ss_pred             CCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChh-hHHHHHHcCC-CCccCccchhccch-HHHHhhHhh
Q 032068            7 ETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRK-YAEEHFLNTH-APVACSQCSETMER-EILAIHKGE   81 (148)
Q Consensus         7 ~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~-~l~~h~~~~h-~~~~C~~C~~~~~~-~~l~~h~~~   81 (148)
                      ++||.|..|++.|. ...|..| ..|.+++++.|+.|++.|... .+..|....+ .++.|..|++.|.. ..|..|++.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHHHH
Confidence            57899999999999 9999999 689998899999999888877 5666653322 26778888888866 777777653

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.41  E-value=9.3e-14  Score=81.43  Aligned_cols=49  Identities=24%  Similarity=0.458  Sum_probs=35.3

Q ss_pred             CccCc--cchhccch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           60 PVACS--QCSETMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        60 ~~~C~--~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      +|.|+  .|++.|.. ..|..|+++|.++++|.|+.|++.|. .+.|..|+++
T Consensus        35 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   87 (89)
T 2wbs_A           35 PYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKR   87 (89)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGGG
T ss_pred             CcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHHh
Confidence            45554  46666655 66777777777888888888888888 7788887653

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.38  E-value=1.7e-13  Score=74.77  Aligned_cols=47  Identities=23%  Similarity=0.496  Sum_probs=37.1

Q ss_pred             CCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChh-hHHHH
Q 032068            7 ETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRK-YAEEH   53 (148)
Q Consensus         7 ~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~-~l~~h   53 (148)
                      ||||.|..|++.|. .++|..| +.|.+++||.|+.|++.|... .|..|
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H   51 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRH   51 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHH
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHH
Confidence            68899999999998 8889999 688888888777777777666 44444

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=5.4e-13  Score=77.59  Aligned_cols=75  Identities=24%  Similarity=0.389  Sum_probs=49.9

Q ss_pred             CccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChhhHHHHHHcCCCCccCccchhccch-HHHHhh
Q 032068            2 AMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMER-EILAIH   78 (148)
Q Consensus         2 ~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~~l~~h~~~~h~~~~C~~C~~~~~~-~~l~~h   78 (148)
                      ++|++++||.|..|++.|. ...|..| +.+.....                     ..++|.|..|++.|.. ..|..|
T Consensus         8 ~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~---------------------~~~~~~C~~C~~~f~~~~~L~~H   66 (86)
T 1x6h_A            8 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF---------------------VPAAFVCSKCGKTFTRRNTMARH   66 (86)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSC---------------------CCCCEECSSSCCEESCHHHHHHH
T ss_pred             ceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcC---------------------CCcceECCCCCChhCCHHHHHHH
Confidence            4566666666666666666 6666666 33332210                     0035778888888866 788888


Q ss_pred             HhhcCCCCcccCCCCCCCC
Q 032068           79 KGENCPQRIVTCDFCEFPL   97 (148)
Q Consensus        79 ~~~~~~~~~~~C~~C~~~f   97 (148)
                      +++|.+++++.|..|+..+
T Consensus        67 ~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           67 ADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             HHHCCCCCSCCCCCCCCCC
T ss_pred             HHHccCCCCcccCCCCCCC
Confidence            8888999999998888764

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=7.5e-13  Score=75.87  Aligned_cols=69  Identities=19%  Similarity=0.384  Sum_probs=46.8

Q ss_pred             CCCCcccCCC--CCCCCC-cchHHHH-H-hhcCCCCccccccCCccChhhHHHHHHcCCCCccCcc--chhccch-HHHH
Q 032068            5 SDETTKICSH--CDRAIP-SSNIDLH-F-AHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQ--CSETMER-EILA   76 (148)
Q Consensus         5 ~~~~~~~C~~--C~~~~~-~~~l~~H-~-~~~~~~~~~C~~C~~~f~~~~l~~h~~~~h~~~~C~~--C~~~~~~-~~l~   76 (148)
                      +++++|.|..  |++.|. ...|..| + .|.++++                         |.|+.  |++.|.. ..|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~-------------------------~~C~~~~C~k~f~~~~~L~   57 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKS-------------------------FSCPEPACGKSFNFKKHLK   57 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCC-------------------------EECSCTTTCCEESSHHHHH
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCC-------------------------eECCCCCCcCccCCHHHHH
Confidence            4566666654  777666 6666666 4 4555444                         55554  6666655 6777


Q ss_pred             hhHhhcCCCCcccCCCCCCCCC
Q 032068           77 IHKGENCPQRIVTCDFCEFPLP   98 (148)
Q Consensus        77 ~h~~~~~~~~~~~C~~C~~~f~   98 (148)
                      .|+++|.+++||.|+.|++.|.
T Consensus        58 ~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           58 EHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             HHHHHHHTSCCCSCCSSSCCCC
T ss_pred             HHHHHhCCCCCeeCCCCCCCCC
Confidence            7777888888999999988874

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.29  E-value=2.7e-13  Score=84.92  Aligned_cols=102  Identities=10%  Similarity=0.095  Sum_probs=72.1

Q ss_pred             CccCCCCcccCCCCCCCCCcchHHHH-Hh---hcCCCCccccccCCccC------hhh-HHHH---HHcCCCCccCccch
Q 032068            2 AMTSDETTKICSHCDRAIPSSNIDLH-FA---HCSRNLERCKVCGDMVP------RKY-AEEH---FLNTHAPVACSQCS   67 (148)
Q Consensus         2 ~~h~~~~~~~C~~C~~~~~~~~l~~H-~~---~~~~~~~~C~~C~~~f~------~~~-l~~h---~~~~h~~~~C~~C~   67 (148)
                      .+++|.++|.|...+-.. ...+..+ ..   ....+.+.|+.|.+.|.      ... +..|   ...  ++|.|..|+
T Consensus         5 ~~~~~~k~~~~~~k~~~~-~~s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~~h~~~--~~~~C~~C~   81 (129)
T 2wbt_A            5 DVDSGSKKYLSNHKGIFI-HVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAI--SQFVCPLCL   81 (129)
T ss_dssp             CCCTTCCGGGGCSSCEEE-ECCHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHHHHHHH--CSEECTTTC
T ss_pred             hhcccccccccccCCeee-eecHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHHHhCCC--CCeECCCCC
Confidence            368899999886543322 2233333 11   22234566777766555      222 3322   222  699999999


Q ss_pred             hccch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           68 ETMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        68 ~~~~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      +.|.. ..|..|+++|  ++||.|+.|++.|. .+.|..|+++
T Consensus        82 k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~  122 (129)
T 2wbt_A           82 MPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCK  122 (129)
T ss_dssp             CEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             cccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHH
Confidence            99988 9999999998  89999999999999 9999999876

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.27  E-value=1.9e-12  Score=74.99  Aligned_cols=40  Identities=20%  Similarity=0.564  Sum_probs=27.8

Q ss_pred             cccC--CCCCCCCC-cchHHHH-HhhcCCCCccccc--cCCccChh
Q 032068            9 TKIC--SHCDRAIP-SSNIDLH-FAHCSRNLERCKV--CGDMVPRK   48 (148)
Q Consensus         9 ~~~C--~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~--C~~~f~~~   48 (148)
                      ||.|  ..|++.|. ...|..| +.|.+++++.|+.  |++.|...
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~   46 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLP   46 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCH
Confidence            5677  77888887 7778777 5777666666655  66665544

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.25  E-value=3.5e-12  Score=74.38  Aligned_cols=50  Identities=16%  Similarity=0.323  Sum_probs=46.6

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      +++.|+.|++.|.. ..|..|+++|.+++||.|+.|++.|. ...|..|++.
T Consensus        27 ~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~   78 (85)
T 2lv2_A           27 ECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINK   78 (85)
T ss_dssp             TTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHT
T ss_pred             CCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcc
Confidence            47899999999988 99999999999999999999999999 9999999764

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.24  E-value=3.3e-12  Score=77.01  Aligned_cols=36  Identities=14%  Similarity=0.251  Sum_probs=27.6

Q ss_pred             CCccCccchhccch-HHHHhh-HhhcCCCCcccCCCCC
Q 032068           59 APVACSQCSETMER-EILAIH-KGENCPQRIVTCDFCE   94 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h-~~~~~~~~~~~C~~C~   94 (148)
                      +||.|..|++.|.. +.|..| +++|.+++||.|..+.
T Consensus        49 kpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           49 SSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            36777777777766 778888 7888899999987643

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.24  E-value=1.1e-11  Score=72.00  Aligned_cols=38  Identities=13%  Similarity=0.259  Sum_probs=34.4

Q ss_pred             CcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCcc
Q 032068            8 TTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMV   45 (148)
Q Consensus         8 ~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f   45 (148)
                      ++|.|..|++.|. ...|..| ..|.+++++.|..|+..+
T Consensus        46 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           46 AAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             cceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCCC
Confidence            7899999999999 9999999 699999999999988764

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.23  E-value=6.7e-12  Score=67.36  Aligned_cols=49  Identities=20%  Similarity=0.506  Sum_probs=45.3

Q ss_pred             CccCccchhccch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           60 PVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        60 ~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      ||.|+.|++.|.. ..|..|+++|.+++||.|+.|++.|. ...|..|+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   51 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKS   51 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHH
Confidence            6889999999988 89999999999999999999999999 9999999875

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.22  E-value=9.7e-12  Score=72.49  Aligned_cols=56  Identities=14%  Similarity=0.319  Sum_probs=41.1

Q ss_pred             ccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChh-hHHHHHHcCC
Q 032068            3 MTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRK-YAEEHFLNTH   58 (148)
Q Consensus         3 ~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~-~l~~h~~~~h   58 (148)
                      .++.+++|.|..|++.|. ..+|..| +.|.+++||.|+.|++.|... .|..|.+..|
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H   80 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCH   80 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTC
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccC
Confidence            455667788888888888 7888888 577777788888888777776 5666654544

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.21  E-value=6.4e-12  Score=67.43  Aligned_cols=50  Identities=24%  Similarity=0.499  Sum_probs=45.0

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      ++|.|+.|++.|.. ..|..|+++|.+++||.|+.|++.|. ...|..|+++
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   54 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLER   54 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHH
Confidence            47899999999988 89999999999999999999999999 9999999875

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.20  E-value=1.6e-11  Score=69.15  Aligned_cols=53  Identities=25%  Similarity=0.400  Sum_probs=44.3

Q ss_pred             CccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChh-hHHHHH
Q 032068            2 AMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRK-YAEEHF   54 (148)
Q Consensus         2 ~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~-~l~~h~   54 (148)
                      ++|++++||.|..|++.|. ...|..| +.|.++++|.|+.|++.|... .|..|+
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~   62 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQ   62 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHH
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHH
Confidence            5789999999999999999 9999999 688888888888888888776 455554

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.18  E-value=2.8e-11  Score=68.98  Aligned_cols=31  Identities=16%  Similarity=0.308  Sum_probs=19.2

Q ss_pred             CccCccchhccch-HHHHhhHhhcCCCCcccC
Q 032068           60 PVACSQCSETMER-EILAIHKGENCPQRIVTC   90 (148)
Q Consensus        60 ~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C   90 (148)
                      +|.|+.|++.|.. ..|..|+++|.+++||.|
T Consensus        46 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           46 PYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             SEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            4555555555555 566666666777777665

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.17  E-value=6.5e-12  Score=69.47  Aligned_cols=55  Identities=25%  Similarity=0.344  Sum_probs=46.0

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-Hh-h-cCCCCccccccCCccChh-hHHHHHH
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FA-H-CSRNLERCKVCGDMVPRK-YAEEHFL   55 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~-~-~~~~~~~C~~C~~~f~~~-~l~~h~~   55 (148)
                      +++|++++||.|..|++.|. ..+|..| .. | .+++++.|+.|++.|... .|..|..
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~   61 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK   61 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHH
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHH
Confidence            46889999999999999999 9999999 55 6 578899999999998877 5666653

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.17  E-value=3.9e-12  Score=74.46  Aligned_cols=77  Identities=18%  Similarity=0.267  Sum_probs=56.3

Q ss_pred             CCCccccccCCccChh-hHHHHHHcC--CCCccCccchhccch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhhHHHHHH
Q 032068           33 RNLERCKVCGDMVPRK-YAEEHFLNT--HAPVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDLAEHQV  107 (148)
Q Consensus        33 ~~~~~C~~C~~~f~~~-~l~~h~~~~--h~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~  107 (148)
                      ++||.|+.|++.|... .+..|...-  .++|.|+.|++.|.. ..|..|++++.+ .++.|+.|++.|. ...|..|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            3678888888888776 455554221  147888888888877 788888877764 7788888888888 788888877


Q ss_pred             Hhc
Q 032068          108 AIV  110 (148)
Q Consensus       108 ~c~  110 (148)
                      ...
T Consensus        80 ~~h   82 (88)
T 1llm_C           80 RLK   82 (88)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.17  E-value=2.6e-11  Score=69.27  Aligned_cols=44  Identities=14%  Similarity=0.298  Sum_probs=41.1

Q ss_pred             ccCCCCcccCCC--CCCCCC-cchHHHH-HhhcCCCCccccccCCccC
Q 032068            3 MTSDETTKICSH--CDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVP   46 (148)
Q Consensus         3 ~h~~~~~~~C~~--C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~   46 (148)
                      .|+++++|.|..  |++.|. ...|..| +.|.+++++.|+.|++.|.
T Consensus        32 ~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           32 QHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             GGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             HhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            588999999998  999999 9999999 6999999999999999884

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.16  E-value=2.3e-11  Score=65.91  Aligned_cols=49  Identities=20%  Similarity=0.426  Sum_probs=44.7

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhhHHHHHH
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDLAEHQV  107 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~  107 (148)
                      ++|.|..|++.|.. ..|..|+++|.+++||.|+.|++.|. ...|..|++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   51 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQ   51 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHT
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHH
Confidence            37899999999987 89999999999999999999999999 999999964

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.16  E-value=2.6e-11  Score=67.86  Aligned_cols=51  Identities=29%  Similarity=0.681  Sum_probs=45.0

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhhHHHHHHHh
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDLAEHQVAI  109 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~~c  109 (148)
                      ++|.|..|++.|.. ..|..|+++|.++++|.|+.|++.|. ...|..|+++.
T Consensus         8 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h   60 (70)
T 1x5w_A            8 HPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF   60 (70)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHH
Confidence            48889999999977 88999999999999999999999998 88999998763

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.7e-13  Score=77.27  Aligned_cols=67  Identities=13%  Similarity=0.272  Sum_probs=54.3

Q ss_pred             chHHHH-HhhcCCCCccccccCCccChh-hHHHHHHcCCCCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           22 SNIDLH-FAHCSRNLERCKVCGDMVPRK-YAEEHFLNTHAPVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        22 ~~l~~H-~~~~~~~~~~C~~C~~~f~~~-~l~~h~~~~h~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ..|..| +.|.+++++.|+.|++.|... .+..     .++|.|+.|++.|.. ..|..|+++|.+++||.|+.|
T Consensus         4 ~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-----~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-----RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-----SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             hhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-----CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            445566 577778888888888888766 3332     368999999999988 899999999999999999987

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.16  E-value=2.2e-11  Score=68.56  Aligned_cols=51  Identities=24%  Similarity=0.460  Sum_probs=46.0

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhhHHHHHHHh
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDLAEHQVAI  109 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~~c  109 (148)
                      ++|.|+.|++.|.. ..|..|+++|.+++||.|+.|++.|. ...|..|+++.
T Consensus        13 k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H   65 (72)
T 1x6e_A           13 KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH   65 (72)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhc
Confidence            58999999999977 88999999999999999999999999 89999998864

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.15  E-value=2.6e-11  Score=70.05  Aligned_cols=70  Identities=20%  Similarity=0.403  Sum_probs=58.8

Q ss_pred             Cccc--cccCCccChh-hHHHHHHcCC---CCccCcc--chhccch-HHHHhhHhhcCCCCcccCCC---CCCCCC-hhh
Q 032068           35 LERC--KVCGDMVPRK-YAEEHFLNTH---APVACSQ--CSETMER-EILAIHKGENCPQRIVTCDF---CEFPLP-AVD  101 (148)
Q Consensus        35 ~~~C--~~C~~~f~~~-~l~~h~~~~h---~~~~C~~--C~~~~~~-~~l~~h~~~~~~~~~~~C~~---C~~~f~-~~~  101 (148)
                      |+.|  +.|++.|... .|..|. ..|   ++|.|+.  |++.|.. ..|..|+++|.+   |.|+.   |++.|. .+.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~   76 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQ-FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTL   76 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHH-HHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHH-HHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHH
Confidence            5789  8899999877 565564 222   5899988  9999987 999999999888   89999   999999 999


Q ss_pred             HHHHHHH
Q 032068          102 LAEHQVA  108 (148)
Q Consensus       102 l~~H~~~  108 (148)
                      |..|+++
T Consensus        77 l~~H~~~   83 (85)
T 2j7j_A           77 YLKHVAE   83 (85)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9999874

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.15  E-value=3.3e-11  Score=68.68  Aligned_cols=56  Identities=21%  Similarity=0.392  Sum_probs=42.6

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-H-hhcCC-CCccccccCCccChh-hHHHHHHc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-F-AHCSR-NLERCKVCGDMVPRK-YAEEHFLN   56 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~-~~~~~-~~~~C~~C~~~f~~~-~l~~h~~~   56 (148)
                      +++|++++||.|..|++.|. ..+|..| + .|.++ ++|.|+.|++.|... .|..|+..
T Consensus         7 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~   67 (77)
T 2ct1_A            7 GRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK   67 (77)
T ss_dssp             CCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHH
T ss_pred             ccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHH
Confidence            46788899999999999998 8889888 5 56654 677787787777766 56666544

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.15  E-value=5.7e-11  Score=70.82  Aligned_cols=50  Identities=24%  Similarity=0.408  Sum_probs=42.3

Q ss_pred             CCccCccchhcc-ch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhhHHHH-HHHh
Q 032068           59 APVACSQCSETM-ER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDLAEH-QVAI  109 (148)
Q Consensus        59 ~~~~C~~C~~~~-~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~l~~H-~~~c  109 (148)
                      ++|.|+.|++.| .. ..|..|+++| +++||.|..|++.|. .+.|..| +++.
T Consensus        33 ~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H   86 (96)
T 2ctd_A           33 GSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANH   86 (96)
T ss_dssp             SCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             CCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhc
Confidence            578888888888 67 8888888888 889999999999998 8889999 6654

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.15  E-value=3.2e-11  Score=68.19  Aligned_cols=51  Identities=22%  Similarity=0.462  Sum_probs=41.3

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhhHHHHHHHh
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDLAEHQVAI  109 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~~c  109 (148)
                      ++|.|..|++.|.. ..|..|+++|.++++|.|+.|++.|. ...|..|+++.
T Consensus        16 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   68 (74)
T 2lce_A           16 KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIH   68 (74)
T ss_dssp             CSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHH
T ss_pred             CCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhc
Confidence            47888888888876 78888888888888888888888888 88888887753

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=3.2e-11  Score=68.88  Aligned_cols=56  Identities=18%  Similarity=0.340  Sum_probs=44.4

Q ss_pred             ccCCCCcccCCCCCCCCC-cchHHHH-HhhcC---CCCccccccCCccChh-hHHHHHHcCC
Q 032068            3 MTSDETTKICSHCDRAIP-SSNIDLH-FAHCS---RNLERCKVCGDMVPRK-YAEEHFLNTH   58 (148)
Q Consensus         3 ~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~---~~~~~C~~C~~~f~~~-~l~~h~~~~h   58 (148)
                      +|++++||.|..|++.|. ...|..| +.|.+   +++|.|+.|++.|... .|..|+...|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   62 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH   62 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTS
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhC
Confidence            488999999999999999 9999999 67775   6778888888777766 5566654444

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.12  E-value=8.1e-11  Score=60.34  Aligned_cols=41  Identities=15%  Similarity=0.247  Sum_probs=38.5

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.++++|.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            4 GSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            57899999999999999999 9999999 79999999999876

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=7.1e-11  Score=60.57  Aligned_cols=41  Identities=20%  Similarity=0.267  Sum_probs=38.4

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ..+|..| +.|.+++||.|+.|
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            4 GSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            57899999999999999999 9999999 79999999999877

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.11  E-value=8.5e-11  Score=66.95  Aligned_cols=60  Identities=20%  Similarity=0.466  Sum_probs=51.2

Q ss_pred             ccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChh-hHHHHHHcCC---CCccC
Q 032068            3 MTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRK-YAEEHFLNTH---APVAC   63 (148)
Q Consensus         3 ~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~-~l~~h~~~~h---~~~~C   63 (148)
                      .+.++++|.|..|++.|. ...|..| +.|.++++|.|+.|++.|... .|..|+ ..|   +||.|
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~-~~H~~~~p~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHH-RVHTGSGPSSG   77 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHG-GGSCCCCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHH-HHhCCCCCCCC
Confidence            467889999999999999 9999999 699999999999999999988 677775 444   26655

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.10  E-value=5.5e-11  Score=63.67  Aligned_cols=50  Identities=18%  Similarity=0.437  Sum_probs=40.2

Q ss_pred             CCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChh-hHHHHHH
Q 032068            6 DETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRK-YAEEHFL   55 (148)
Q Consensus         6 ~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~-~l~~h~~   55 (148)
                      |++||.|..|++.|. ...|..| ..|.+++++.|+.|++.|... .|..|+.
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   53 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLE   53 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHH
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHH
Confidence            578999999999999 9999999 689999999999999999877 5666653

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.10  E-value=8.9e-11  Score=60.17  Aligned_cols=41  Identities=15%  Similarity=0.232  Sum_probs=38.3

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. .+.|..| +.|.++++|.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            4 GSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56899999999999999999 9999999 79999999999876

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.10  E-value=8.9e-11  Score=60.14  Aligned_cols=41  Identities=22%  Similarity=0.284  Sum_probs=38.3

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. .++|..| +.|.++++|.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            4 GSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             cCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            57899999999999999999 9999999 69999999999876

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=3.9e-11  Score=66.44  Aligned_cols=53  Identities=21%  Similarity=0.425  Sum_probs=44.0

Q ss_pred             CCccCccchhccchHHHHhhHhhcCCCCcccCC-CCCCCCC-hhhHHHHHHH-hccc
Q 032068           59 APVACSQCSETMEREILAIHKGENCPQRIVTCD-FCEFPLP-AVDLAEHQVA-IVNN  112 (148)
Q Consensus        59 ~~~~C~~C~~~~~~~~l~~h~~~~~~~~~~~C~-~C~~~f~-~~~l~~H~~~-c~~~  112 (148)
                      ++|.|..|++.|..+.|..|+++ ++++||.|+ .|++.|. ++.|..|+++ |+++
T Consensus         9 ~~~~C~~C~k~f~~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~   64 (66)
T 2eod_A            9 RTQPCTYCTKEFVFDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTA   64 (66)
T ss_dssp             CEEECSSSCCEEEHHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSC
T ss_pred             CCeeccccCCccCHHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccC
Confidence            47888888888886678888888 889999999 8999988 8899999886 6553

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=6.8e-11  Score=60.00  Aligned_cols=41  Identities=22%  Similarity=0.273  Sum_probs=38.4

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. .++|..| +.|.++++|.|+.|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            57899999999999999999 9999999 69999999999876

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.09  E-value=8.3e-11  Score=65.75  Aligned_cols=52  Identities=19%  Similarity=0.443  Sum_probs=40.8

Q ss_pred             ccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChh-hHHHHH
Q 032068            3 MTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRK-YAEEHF   54 (148)
Q Consensus         3 ~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~-~l~~h~   54 (148)
                      +|++++||.|..|++.|. ...|..| ..|.++++|.|+.|++.|... .|..|+
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~   57 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHM   57 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHH
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHH
Confidence            578889999999999999 8899999 588887778777777777665 444443

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.09  E-value=5.6e-11  Score=65.62  Aligned_cols=50  Identities=16%  Similarity=0.331  Sum_probs=44.2

Q ss_pred             CCccCccchhccch-HHHHhhHhh-c-CCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           59 APVACSQCSETMER-EILAIHKGE-N-CPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~-~-~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      ++|.|+.|++.|.. ..|..|++. | .+++||.|+.|++.|. .+.|..|+++
T Consensus         9 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~   62 (66)
T 2drp_A            9 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI   62 (66)
T ss_dssp             TEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHH
T ss_pred             cceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHH
Confidence            58899999999977 889999887 7 5889999999999999 8999999875

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=8.7e-11  Score=60.19  Aligned_cols=41  Identities=12%  Similarity=0.203  Sum_probs=38.3

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ..+|..| +.|.+++||.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            4 GSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            46899999999999999999 9999999 69999999999876

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=7.7e-11  Score=60.35  Aligned_cols=41  Identities=15%  Similarity=0.223  Sum_probs=38.5

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. .+.|..| ..|.++++|.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            4 GSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             cCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            57899999999999999999 9999999 69999999999887

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=8.5e-11  Score=60.19  Aligned_cols=41  Identities=12%  Similarity=0.161  Sum_probs=38.3

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ..+|..| +.|.+++||.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            4 GSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             cccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            57899999999999999999 9999999 69999999999876

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.2e-10  Score=59.62  Aligned_cols=41  Identities=17%  Similarity=0.293  Sum_probs=38.3

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ...|..| ..|.++++|.|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            4 GSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56899999999999999999 9999999 69999999999877

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=8.7e-11  Score=60.19  Aligned_cols=41  Identities=15%  Similarity=0.192  Sum_probs=38.3

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ..+|..| +.|.++++|.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            4 GSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            57899999999999999999 9999999 69999999999876

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.08  E-value=5.7e-11  Score=71.54  Aligned_cols=64  Identities=20%  Similarity=0.240  Sum_probs=53.4

Q ss_pred             ccCCCCcccCCCCCCCCC-cchHHHH-H-hh---cCCCCccccccCCccChh-hHHHHHHcCC---CCccCccc
Q 032068            3 MTSDETTKICSHCDRAIP-SSNIDLH-F-AH---CSRNLERCKVCGDMVPRK-YAEEHFLNTH---APVACSQC   66 (148)
Q Consensus         3 ~h~~~~~~~C~~C~~~~~-~~~l~~H-~-~~---~~~~~~~C~~C~~~f~~~-~l~~h~~~~h---~~~~C~~C   66 (148)
                      ..+|++||.|..|++.|. .+.|..| + .|   .+++||.|..|++.|... .|..|....|   +||.|..+
T Consensus        12 ~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~   85 (102)
T 2ghf_A           12 NKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMV   85 (102)
T ss_dssp             CCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEEC
T ss_pred             cCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcc
Confidence            457899999999999999 9999999 5 48   568999999999999988 6777733555   48998764

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=9.9e-11  Score=60.02  Aligned_cols=41  Identities=17%  Similarity=0.200  Sum_probs=38.3

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.++++|.|+.|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            4 GSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            57899999999999999999 9999999 69999999999876

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.1e-10  Score=59.73  Aligned_cols=41  Identities=15%  Similarity=0.243  Sum_probs=38.2

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ...|..| ..|.+++||.|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            4 GSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            46899999999999999999 9999999 79999999999876

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=7.6e-11  Score=60.45  Aligned_cols=41  Identities=17%  Similarity=0.159  Sum_probs=38.3

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. .++|..| ..|.++++|.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            4 GSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            56899999999999999999 9999999 69999999999876

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=9.5e-11  Score=60.07  Aligned_cols=41  Identities=20%  Similarity=0.249  Sum_probs=38.2

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ..+|..| +.|.++++|.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            4 GSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             SSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            47899999999999999999 9999999 69999999999876

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=8.8e-11  Score=60.16  Aligned_cols=41  Identities=15%  Similarity=0.235  Sum_probs=38.4

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ..+|..| +.|.++++|.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            4 GSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            46899999999999999999 9999999 79999999999876

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=8.2e-11  Score=60.33  Aligned_cols=41  Identities=20%  Similarity=0.310  Sum_probs=38.5

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      |++|++++||.|..|++.|. ...|..| +.|.++++|.|+.|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            4 GSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            57899999999999999999 9999999 79999999999877

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=8.2e-11  Score=60.28  Aligned_cols=41  Identities=17%  Similarity=0.281  Sum_probs=38.3

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. .+.|..| ..|.++++|.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            4 GSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             cCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            57899999999999999999 9999999 69999999999876

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.07  E-value=9.7e-11  Score=60.04  Aligned_cols=41  Identities=12%  Similarity=0.193  Sum_probs=38.3

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.++++|.|+.|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            4 GSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            57899999999999999999 9999999 69999999999876

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=9.6e-11  Score=60.02  Aligned_cols=41  Identities=15%  Similarity=0.264  Sum_probs=38.3

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. .+.|..| +.|.++++|.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            4 GSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             ccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56899999999999999999 9999999 69999999999876

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=9.9e-11  Score=59.93  Aligned_cols=41  Identities=17%  Similarity=0.262  Sum_probs=38.2

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.+++||.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            4 GSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56899999999999999999 9999999 69999999999877

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1e-10  Score=59.88  Aligned_cols=41  Identities=15%  Similarity=0.198  Sum_probs=38.3

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.++++|.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            4 GSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            56899999999999999999 9999999 69999999999876

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=9.5e-11  Score=60.03  Aligned_cols=41  Identities=22%  Similarity=0.274  Sum_probs=38.3

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ..+|..| +.|.++++|.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            4 GSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56899999999999999999 9999999 79999999999876

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.2e-10  Score=59.65  Aligned_cols=41  Identities=17%  Similarity=0.282  Sum_probs=38.1

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ..+|..| +.|.+++||.|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            4 GSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             ccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56899999999999999999 9999999 69999999999876

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=9.5e-11  Score=60.03  Aligned_cols=41  Identities=12%  Similarity=0.228  Sum_probs=38.3

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.++++|.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            4 GSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            57899999999999999999 9999999 69999999999876

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=8.5e-11  Score=60.26  Aligned_cols=41  Identities=15%  Similarity=0.243  Sum_probs=38.2

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ..+|..| +.|.++++|.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            4 GSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            57899999999999999999 9999999 79999999999876

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.1e-10  Score=59.72  Aligned_cols=41  Identities=20%  Similarity=0.243  Sum_probs=38.3

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.++++|.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            4 GSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             ccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            56899999999999999999 9999999 69999999999876

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.06  E-value=9.9e-11  Score=59.98  Aligned_cols=41  Identities=15%  Similarity=0.246  Sum_probs=38.2

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ..+|..| +.|.+++||.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            4 GSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             ccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56899999999999999999 9999999 69999999999876

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.06  E-value=1.1e-10  Score=59.81  Aligned_cols=41  Identities=15%  Similarity=0.187  Sum_probs=38.3

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.++++|.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            4 GSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            57899999999999999999 9999999 69999999999876

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=1e-10  Score=59.93  Aligned_cols=41  Identities=17%  Similarity=0.172  Sum_probs=38.3

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.++++|.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            4 GSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            57899999999999999999 9999999 69999999999876

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=1.1e-10  Score=59.74  Aligned_cols=41  Identities=15%  Similarity=0.149  Sum_probs=38.3

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. .+.|..| +.|.++++|.|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            4 GSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             ccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            46899999999999999999 9999999 69999999999876

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.2e-10  Score=59.66  Aligned_cols=41  Identities=17%  Similarity=0.246  Sum_probs=38.2

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. .+.|..| +.|.++++|.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            4 GSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            46899999999999999999 9999999 69999999999876

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=9.4e-11  Score=60.02  Aligned_cols=41  Identities=15%  Similarity=0.213  Sum_probs=38.3

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. .+.|..| +.|.+++||.|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            4 GSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            46899999999999999999 9999999 69999999999876

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=8.8e-11  Score=60.17  Aligned_cols=41  Identities=15%  Similarity=0.216  Sum_probs=38.2

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. .+.|..| +.|.++++|.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            4 GSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             ccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            57899999999999999999 9999999 69999999999877

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.05  E-value=1e-10  Score=59.90  Aligned_cols=41  Identities=15%  Similarity=0.185  Sum_probs=38.2

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. .+.|..| +.|.+++||.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            4 GSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            46899999999999999999 9999999 69999999999876

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.2e-10  Score=59.65  Aligned_cols=41  Identities=17%  Similarity=0.241  Sum_probs=38.2

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. .+.|..| +.|.+++||.|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            4 GSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             cccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            56899999999999999999 9999999 69999999999876

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.05  E-value=1.1e-10  Score=62.03  Aligned_cols=45  Identities=20%  Similarity=0.357  Sum_probs=42.0

Q ss_pred             ccCCCCcccCCCCCCCCC-cchHHHH-H-hhcCCCCccccccCCccCh
Q 032068            3 MTSDETTKICSHCDRAIP-SSNIDLH-F-AHCSRNLERCKVCGDMVPR   47 (148)
Q Consensus         3 ~h~~~~~~~C~~C~~~~~-~~~l~~H-~-~~~~~~~~~C~~C~~~f~~   47 (148)
                      .|++++||.|..|++.|. ...|..| + .|.+++++.|+.|++.|..
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            678999999999999999 9999999 6 8999999999999999975

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.2e-10  Score=59.57  Aligned_cols=41  Identities=20%  Similarity=0.246  Sum_probs=38.2

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.++++|.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            4 GSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56899999999999999999 9999999 69999999999877

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1e-10  Score=59.94  Aligned_cols=41  Identities=17%  Similarity=0.269  Sum_probs=38.3

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ..+|..| +.|.++++|.|+.|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            57899999999999999999 9999999 69999999999876

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.1e-10  Score=59.76  Aligned_cols=41  Identities=17%  Similarity=0.264  Sum_probs=38.2

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ..+|..| ..|.+++||.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            4 GSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            46899999999999999999 9999999 69999999999876

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=9.4e-11  Score=69.99  Aligned_cols=49  Identities=20%  Similarity=0.343  Sum_probs=24.7

Q ss_pred             CccCccchhccc-h-HHHHhhHhhcCC-CCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           60 PVACSQCSETME-R-EILAIHKGENCP-QRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        60 ~~~C~~C~~~~~-~-~~l~~h~~~~~~-~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      +|.|..|++.|. . ..|..|+++|.+ +++|.|+.|++.|. ...|..|+++
T Consensus        24 ~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~   76 (98)
T 2gqj_A           24 EAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMA   76 (98)
T ss_dssp             CCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHH
T ss_pred             CcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHH
Confidence            444444444444 4 444455544444 45555555555555 5555555543

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=1.1e-10  Score=59.90  Aligned_cols=41  Identities=17%  Similarity=0.282  Sum_probs=38.2

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ..+|..| +.|.++++|.|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            4 GSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             cCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56899999999999999999 9999999 69999999999877

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.8e-10  Score=59.17  Aligned_cols=41  Identities=12%  Similarity=0.142  Sum_probs=38.2

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-H-hhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-F-AHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~-~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. .+.|..| + .|.+++||.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            4 GSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            57899999999999999999 9999999 7 8999999999876

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=1.2e-10  Score=59.67  Aligned_cols=41  Identities=17%  Similarity=0.275  Sum_probs=38.1

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.++++|.|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            4 GSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             cccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56899999999999999999 9999999 69999999999876

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.4e-10  Score=59.37  Aligned_cols=41  Identities=22%  Similarity=0.299  Sum_probs=38.0

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ..+|..| ..|.++++|.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            4 GSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             ccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            46899999999999999999 9999999 69999999999876

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.2e-10  Score=59.68  Aligned_cols=41  Identities=15%  Similarity=0.264  Sum_probs=38.1

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. .++|..| +.|.+++||.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            4 GSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            46899999999999999999 9999999 69999999999876

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.03  E-value=3.2e-10  Score=64.01  Aligned_cols=61  Identities=21%  Similarity=0.434  Sum_probs=37.3

Q ss_pred             ccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChhhHHHHHHcCCCCccCccchhccch-HHHHhhH
Q 032068            3 MTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMER-EILAIHK   79 (148)
Q Consensus         3 ~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~~l~~h~~~~h~~~~C~~C~~~~~~-~~l~~h~   79 (148)
                      .+.++++|.|..|++.|. ...|..| +.|.+++++.|+                         .|++.|.. ..|..|+
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~-------------------------~C~k~f~~~~~L~~H~   65 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCN-------------------------ICGAQFNRPANLKTHT   65 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECT-------------------------TTCCEESCHHHHHHHH
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECC-------------------------CCCchhCCHHHHHHHH
Confidence            345666777777777777 6677777 466555555554                         45555544 5555666


Q ss_pred             hhcCCCCcc
Q 032068           80 GENCPQRIV   88 (148)
Q Consensus        80 ~~~~~~~~~   88 (148)
                      ++|.+++||
T Consensus        66 ~~H~~~kp~   74 (74)
T 2lce_A           66 RIHSGEKPY   74 (74)
T ss_dssp             HHHCCSCCC
T ss_pred             HhcCCCCCC
Confidence            666666654

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=4.3e-11  Score=71.50  Aligned_cols=74  Identities=12%  Similarity=0.195  Sum_probs=58.9

Q ss_pred             CCC-cchHHHH-HhhcCCCCccccccCCccC-hh-hHHHHHHcCC---CCccCccchhccch-HHHHhhHhhcCCCCccc
Q 032068           18 AIP-SSNIDLH-FAHCSRNLERCKVCGDMVP-RK-YAEEHFLNTH---APVACSQCSETMER-EILAIHKGENCPQRIVT   89 (148)
Q Consensus        18 ~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~-~~-~l~~h~~~~h---~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~   89 (148)
                      .+. ...+..| ..|.++++|.|+.|++.|. .. .|..|+...+   ++|.|..|++.|.. ..|..|+++|.+++|..
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence            344 5667788 6899999999999999998 77 5555542211   48999999999988 99999999999999865


Q ss_pred             CC
Q 032068           90 CD   91 (148)
Q Consensus        90 C~   91 (148)
                      -.
T Consensus        85 ~~   86 (98)
T 2gqj_A           85 AE   86 (98)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.1e-10  Score=59.86  Aligned_cols=41  Identities=17%  Similarity=0.219  Sum_probs=38.3

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.++++|.|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            4 GSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            46899999999999999999 9999999 69999999999876

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=9.7e-11  Score=60.00  Aligned_cols=41  Identities=12%  Similarity=0.191  Sum_probs=38.3

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.++++|.|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            4 GSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56899999999999999999 9999999 69999999999877

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.1e-10  Score=59.77  Aligned_cols=41  Identities=17%  Similarity=0.233  Sum_probs=38.2

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. .++|..| ..|.++++|.|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            4 GSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             TTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             ccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            46899999999999999999 9999999 69999999999876

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.5e-10  Score=59.23  Aligned_cols=41  Identities=15%  Similarity=0.247  Sum_probs=38.2

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.++++|.|+.|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            47899999999999999999 9999999 69999999999876

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=8.9e-11  Score=60.15  Aligned_cols=41  Identities=17%  Similarity=0.274  Sum_probs=38.2

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.++++|.|+.|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            4 GSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            57899999999999999999 9999999 69999999999877

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.01  E-value=3e-10  Score=61.42  Aligned_cols=51  Identities=22%  Similarity=0.488  Sum_probs=40.3

Q ss_pred             CcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChh-hHHHHHHcCC
Q 032068            8 TTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRK-YAEEHFLNTH   58 (148)
Q Consensus         8 ~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~-~l~~h~~~~h   58 (148)
                      +||.|..|++.|. ...|..| +.|.+++++.|+.|++.|... .|..|+...|
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H   54 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH   54 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHc
Confidence            5788999999998 8889999 688888888888888888777 5666654444

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.00  E-value=6e-10  Score=65.74  Aligned_cols=32  Identities=9%  Similarity=0.057  Sum_probs=28.5

Q ss_pred             ccCccchhccch-HHHHhhHhhcCCCCcccCCC
Q 032068           61 VACSQCSETMER-EILAIHKGENCPQRIVTCDF   92 (148)
Q Consensus        61 ~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~   92 (148)
                      |.|..|++.|.. ..|..|+++|.+++||.|+.
T Consensus        63 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   95 (95)
T 2ej4_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKSGPSSG   95 (95)
T ss_dssp             TTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSCC
T ss_pred             cCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            789999999987 89999999999999999863

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=1.2e-10  Score=66.50  Aligned_cols=50  Identities=20%  Similarity=0.429  Sum_probs=39.7

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCC---CCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           59 APVACSQCSETMER-EILAIHKGENCP---QRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~---~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      ++|.|..|++.|.. ..|..|+++|.+   +++|.|+.|++.|. ...|..|++.
T Consensus         6 k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~   60 (78)
T 2d9h_A            6 SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSK   60 (78)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             cCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHH
Confidence            47788888888876 778888877774   78888888888888 8888888754

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.1e-10  Score=58.68  Aligned_cols=41  Identities=20%  Similarity=0.242  Sum_probs=37.6

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ..+|..| +.|.+++||.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            4 GSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            57899999999999999999 9999999 69999999999864

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.99  E-value=5.9e-10  Score=66.36  Aligned_cols=72  Identities=11%  Similarity=0.189  Sum_probs=56.1

Q ss_pred             CCCC-cchHHHH-HhhcCCCCccccccCCcc-Chh-hHHHHHHcC-CCCccCccchhccch-HHHHhh-HhhcCCCCcc
Q 032068           17 RAIP-SSNIDLH-FAHCSRNLERCKVCGDMV-PRK-YAEEHFLNT-HAPVACSQCSETMER-EILAIH-KGENCPQRIV   88 (148)
Q Consensus        17 ~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f-~~~-~l~~h~~~~-h~~~~C~~C~~~~~~-~~l~~h-~~~~~~~~~~   88 (148)
                      ..+. ...+..| ..+.+++++.|+.|++.| ... .|..|+... .++|.|..|++.|.. ..|..| +++|.++..+
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~   92 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSG   92 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSC
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCC
Confidence            4566 7788888 688889999999999999 766 565554321 258999999999988 999999 8888765443

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.9e-10  Score=57.70  Aligned_cols=41  Identities=17%  Similarity=0.208  Sum_probs=37.7

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      +++|++++||.|..|++.|. ..+|..| +.|.++++|.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            4 GSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            57899999999999999999 9999999 69999999999864

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.98  E-value=3e-10  Score=57.89  Aligned_cols=41  Identities=17%  Similarity=0.235  Sum_probs=38.4

Q ss_pred             CccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccC
Q 032068            2 AMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCG   42 (148)
Q Consensus         2 ~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~   42 (148)
                      ..|++++||.|..|++.|. ..+|..| +.|.+++++.|+.|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            4789999999999999999 9999999 799999999999985

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.96  E-value=2e-10  Score=64.65  Aligned_cols=50  Identities=24%  Similarity=0.463  Sum_probs=44.5

Q ss_pred             CCccCc--cchhccch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           59 APVACS--QCSETMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        59 ~~~~C~--~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      ++|.|+  .|++.|.. ..|..|+++|.++++|.|+.|++.|. .+.|..|+++
T Consensus        18 ~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   71 (73)
T 1f2i_G           18 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT   71 (73)
T ss_dssp             CCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTT
T ss_pred             CccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHh
Confidence            488996  69999987 89999999999999999999999999 9999999763

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=8e-10  Score=55.27  Aligned_cols=39  Identities=15%  Similarity=0.273  Sum_probs=36.0

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCK   39 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~   39 (148)
                      +++|++++||.|..|++.|. .+.|..| +.|.++++|.|.
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            57899999999999999999 9999999 699999999874

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.95  E-value=5.8e-10  Score=63.42  Aligned_cols=50  Identities=18%  Similarity=0.414  Sum_probs=35.2

Q ss_pred             CCccCccchhccch-HHHHhhHh-hcCCC-CcccCCCCCCCCC-hhhHHHHHHH
Q 032068           59 APVACSQCSETMER-EILAIHKG-ENCPQ-RIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~-~~~~~-~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      ++|.|..|++.|.. ..|..|++ .|.++ ++|.|+.|++.|. ...|..|+++
T Consensus        14 k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~   67 (77)
T 2ct1_A           14 KPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK   67 (77)
T ss_dssp             CSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHH
Confidence            36777777777766 67777765 45553 6777777777777 7777777765

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=7.8e-10  Score=56.54  Aligned_cols=40  Identities=13%  Similarity=0.208  Sum_probs=36.9

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKV   40 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~   40 (148)
                      +++|++++||.|..|++.|. ..+|..| +.|.++++|.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            4 GSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57899999999999999999 9999999 6999999999863

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=6.4e-10  Score=56.91  Aligned_cols=40  Identities=20%  Similarity=0.253  Sum_probs=36.9

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKV   40 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~   40 (148)
                      |++|++++||.|..|++.|. ...|..| +.|.++++|.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            4 GSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             SSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            57899999999999999999 9999999 6999999999873

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=9.7e-10  Score=56.17  Aligned_cols=40  Identities=15%  Similarity=0.268  Sum_probs=36.9

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKV   40 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~   40 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.++++|.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            4 GSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            57899999999999999999 9999999 6999999999863

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.94  E-value=2.5e-10  Score=69.28  Aligned_cols=63  Identities=16%  Similarity=0.237  Sum_probs=54.1

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhhHHHHHHH-----------hcccccCCcchhhh
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDLAEHQVA-----------IVNNFENGKTIADL  122 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~~-----------c~~~~~~~~~~~~~  122 (148)
                      ++|.| .|++.|.. ..|..|++.|.++++|.|+.|++.|. ...|..|+++           |++.|.....|.+.
T Consensus         9 k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   84 (110)
T 2csh_A            9 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRH   84 (110)
T ss_dssp             CCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHH
T ss_pred             CCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHH
Confidence            58999 89999988 89999999999999999999999999 9999999875           66777665555443

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=9.2e-10  Score=56.24  Aligned_cols=40  Identities=15%  Similarity=0.258  Sum_probs=36.8

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKV   40 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~   40 (148)
                      +++|++++||.|..|++.|. ..+|..| +.|.+++||.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            4 GSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             ccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            46899999999999999999 9999999 6999999999863

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.94  E-value=6e-10  Score=55.77  Aligned_cols=39  Identities=21%  Similarity=0.292  Sum_probs=36.2

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCK   39 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~   39 (148)
                      +++|++++||.|..|++.|. ..+|..| +.|.++++|.|+
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            57899999999999999999 9999999 699999999884

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.93  E-value=9.5e-10  Score=61.78  Aligned_cols=52  Identities=21%  Similarity=0.463  Sum_probs=43.0

Q ss_pred             ccCCCCcccCC--CCCCCCC-cchHHHH-HhhcCCCCccccccCCccChh-hHHHHH
Q 032068            3 MTSDETTKICS--HCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRK-YAEEHF   54 (148)
Q Consensus         3 ~h~~~~~~~C~--~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~-~l~~h~   54 (148)
                      ++.++++|.|.  .|++.|. ...|..| ..|.++++|.|+.|++.|... .+..|.
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   69 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI   69 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHH
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHH
Confidence            57888899996  6999999 8899999 688888888888888888877 566664

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.93  E-value=7.7e-10  Score=56.56  Aligned_cols=40  Identities=18%  Similarity=0.273  Sum_probs=36.9

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKV   40 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~   40 (148)
                      +++|++++||.|..|++.|. ..+|..| +.|.++++|.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            4 GSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57899999999999999999 9999999 7999999999863

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=6.9e-10  Score=56.75  Aligned_cols=40  Identities=15%  Similarity=0.213  Sum_probs=36.9

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKV   40 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~   40 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.+++||.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            4 GSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             ccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            57899999999999999999 9999999 6999999999873

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1e-09  Score=56.04  Aligned_cols=39  Identities=15%  Similarity=0.266  Sum_probs=36.4

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCK   39 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~   39 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.++++|.|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            4 GSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            57899999999999999999 9999999 699999999986

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=8.7e-10  Score=56.32  Aligned_cols=40  Identities=15%  Similarity=0.223  Sum_probs=36.7

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKV   40 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~   40 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.+++||.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            4 GSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            56899999999999999999 9999999 6999999999873

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.2e-09  Score=55.75  Aligned_cols=40  Identities=20%  Similarity=0.307  Sum_probs=36.8

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKV   40 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~   40 (148)
                      +++|++++||.|..|++.|. ..+|..| ..|.+++||.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            4 GSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56899999999999999999 9999999 6999999999863

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.3e-09  Score=55.73  Aligned_cols=40  Identities=18%  Similarity=0.262  Sum_probs=36.7

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKV   40 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~   40 (148)
                      +++|++++||.|..|++.|. ...|..| ..|.+++||.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            4 GSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             ccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            46899999999999999999 9999999 6999999999863

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1e-09  Score=56.09  Aligned_cols=40  Identities=15%  Similarity=0.245  Sum_probs=36.6

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKV   40 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~   40 (148)
                      +++|++++||.|..|++.|. ..+|..| ..|.+++||.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            4 GSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            46899999999999999999 9999999 6999999999863

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=1.6e-09  Score=55.41  Aligned_cols=39  Identities=21%  Similarity=0.224  Sum_probs=36.5

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCK   39 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~   39 (148)
                      +++|++++||.|..|++.|. ..+|..| +.|.++++|.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            57899999999999999999 9999999 699999999986

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1e-09  Score=55.99  Aligned_cols=40  Identities=18%  Similarity=0.326  Sum_probs=36.8

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKV   40 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~   40 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.+++||.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            4 GSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             cCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            46899999999999999999 9999999 6999999999863

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.1e-09  Score=55.90  Aligned_cols=40  Identities=18%  Similarity=0.247  Sum_probs=36.7

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKV   40 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~   40 (148)
                      +++|++++||.|..|++.|. ..+|..| ..|.+++||.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            4 GSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             ccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            46899999999999999999 9999999 6999999999863

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1e-09  Score=56.07  Aligned_cols=40  Identities=20%  Similarity=0.346  Sum_probs=36.8

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKV   40 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~   40 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.++++|.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            4 GSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             ccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            56899999999999999999 9999999 6999999999863

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=7.9e-10  Score=56.52  Aligned_cols=40  Identities=20%  Similarity=0.282  Sum_probs=36.8

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKV   40 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~   40 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.+++||.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            4 GSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             ccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57899999999999999999 9999999 6999999999863

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.1e-09  Score=55.95  Aligned_cols=40  Identities=15%  Similarity=0.253  Sum_probs=36.8

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKV   40 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~   40 (148)
                      +++|++++||.|..|++.|. ..+|..| +.|.++++|.|+.
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            4 GSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46899999999999999999 9999999 6999999999863

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=9.1e-10  Score=55.09  Aligned_cols=38  Identities=13%  Similarity=0.281  Sum_probs=35.4

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERC   38 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C   38 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.+++||.|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            3 SGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            47899999999999999999 9999999 79999999887

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.2e-09  Score=55.75  Aligned_cols=39  Identities=21%  Similarity=0.339  Sum_probs=36.3

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCK   39 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~   39 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            4 GSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             ccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            57899999999999999999 9999999 699999999986

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.2e-09  Score=55.74  Aligned_cols=40  Identities=20%  Similarity=0.333  Sum_probs=36.6

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKV   40 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~   40 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.++++|.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            4 GSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56899999999999999999 9999999 6999999999863

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.1e-09  Score=55.35  Aligned_cols=39  Identities=15%  Similarity=0.281  Sum_probs=35.9

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCK   39 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~   39 (148)
                      +++|++++||.|..|++.|. ...|..| ..|.++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            4 GSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            56899999999999999999 9999999 699999999884

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.90  E-value=1.1e-09  Score=58.08  Aligned_cols=40  Identities=20%  Similarity=0.356  Sum_probs=36.8

Q ss_pred             CCccCccchhccch-HHHHhhHh-hcCCCCcccCCCCCCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKG-ENCPQRIVTCDFCEFPLP   98 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~-~~~~~~~~~C~~C~~~f~   98 (148)
                      ++|.|+.|++.|.. ..|..|++ +|.+++||.|+.|++.|.
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~   52 (54)
T 2eps_A           11 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS   52 (54)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCC
Confidence            58999999999988 89999986 899999999999999986

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.89  E-value=1.8e-09  Score=54.39  Aligned_cols=39  Identities=15%  Similarity=0.279  Sum_probs=36.1

Q ss_pred             CccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccc
Q 032068            2 AMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKV   40 (148)
Q Consensus         2 ~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~   40 (148)
                      ++|++++||.|..|++.|. ..+|..| +.|.++++|.|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            6799999999999999999 9999999 6999999999863

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=1.6e-09  Score=54.77  Aligned_cols=39  Identities=21%  Similarity=0.236  Sum_probs=36.0

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCK   39 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~   39 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.++++|.|+
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            4 GSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             SCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            46899999999999999999 9999999 699999999884

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=1.9e-10  Score=65.42  Aligned_cols=56  Identities=20%  Similarity=0.313  Sum_probs=44.7

Q ss_pred             CCccCccchhccchHHHHhhHhhcCCCCcccCCCCCCCCChhhHHHHHHHhcccccC
Q 032068           59 APVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQVAIVNNFEN  115 (148)
Q Consensus        59 ~~~~C~~C~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~l~~H~~~c~~~~~~  115 (148)
                      +++.|..|++.|....|..|+ .+++++|+.|+.|++.|.+..|..|+++|+..-..
T Consensus        16 r~~~C~~C~~~~~~~~L~~H~-~~c~~~~~~C~~C~~~~~~~~l~~H~~~c~~~~~~   71 (75)
T 2d9k_A           16 RLAVCQHCDLELSILKLKEHE-DYCGARTELCGNCGRNVLVKDLKTHPEVCGREGSG   71 (75)
T ss_dssp             CCEECSSSCCEECHHHHHHHH-HHHHHCEEECSSSCCEEETTGGGTHHHHBTTBSSS
T ss_pred             cccCCcccChHhhHHHHHHHH-hHcCCCceEcccCCCcCcHHHHHHHHHHccCCcCC
Confidence            467777777777667788888 78889999999999887788899999888775443

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.1e-09  Score=55.91  Aligned_cols=39  Identities=18%  Similarity=0.229  Sum_probs=36.4

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCK   39 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~   39 (148)
                      +++|++++||.|..|++.|. ..+|..| ..|.++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            4 GSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            57899999999999999999 9999999 699999999986

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1e-09  Score=56.03  Aligned_cols=40  Identities=18%  Similarity=0.312  Sum_probs=36.8

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKV   40 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~   40 (148)
                      +++|++++||.|..|++.|. ..+|..| ..|.+++||.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            4 GSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            46899999999999999999 9999999 6999999999863

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=1.2e-09  Score=55.27  Aligned_cols=39  Identities=21%  Similarity=0.312  Sum_probs=35.9

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCK   39 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~   39 (148)
                      +++|++++||.|..|++.|. ...|..| ..|.++++|.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            4 GSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             SCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             ccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            46899999999999999999 9999999 699999999884

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.1e-09  Score=55.85  Aligned_cols=40  Identities=18%  Similarity=0.244  Sum_probs=36.8

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKV   40 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~   40 (148)
                      +++|++++||.|..|++.|. ..+|..| +.|.+++||.|+.
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            4 GSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            46899999999999999999 9999999 6999999999863

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=1.2e-09  Score=54.64  Aligned_cols=38  Identities=13%  Similarity=0.202  Sum_probs=35.1

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERC   38 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C   38 (148)
                      +++|++++||.|..|++.|. .+.|..| ..|.++++|.|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            3 SGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            47899999999999999999 9999999 69999999877

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.1e-09  Score=55.28  Aligned_cols=39  Identities=21%  Similarity=0.329  Sum_probs=36.0

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCK   39 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~   39 (148)
                      +++|++++||.|..|++.|. ..+|..| ..|.++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            4 GSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             SSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             ccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            46899999999999999999 9999999 699999999884

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.2e-09  Score=55.83  Aligned_cols=40  Identities=20%  Similarity=0.280  Sum_probs=36.7

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKV   40 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~   40 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.++++|.|+.
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            4 GSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            57899999999999999999 9999999 6999999999863

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=1.2e-09  Score=55.20  Aligned_cols=39  Identities=13%  Similarity=0.208  Sum_probs=36.0

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCK   39 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~   39 (148)
                      +++|++++||.|..|++.|. ...|..| ..|.++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            4 GSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             ccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            46899999999999999999 9999999 699999999884

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.1e-09  Score=55.85  Aligned_cols=40  Identities=23%  Similarity=0.306  Sum_probs=36.7

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKV   40 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~   40 (148)
                      +++|++++||.|..|++.|. ..+|..| +.|.+++||.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            4 GSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46899999999999999999 9999999 6999999999863

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.88  E-value=4.7e-10  Score=61.32  Aligned_cols=46  Identities=13%  Similarity=0.255  Sum_probs=39.4

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHHHhhcCCCCccccccCCccChh
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLHFAHCSRNLERCKVCGDMVPRK   48 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H~~~~~~~~~~C~~C~~~f~~~   48 (148)
                      +++|++++||.|..|++.|. ...|.  +.|.++++|.|+.|++.|...
T Consensus         6 ~~~H~~~k~~~C~~C~k~F~~~~~l~--~~H~~~k~~~C~~C~k~f~~~   52 (62)
T 1vd4_A            6 ERDSTNRASFKCPVCSSTFTDLEANQ--LFDPMTGTFRCTFCHTEVEED   52 (62)
T ss_dssp             SSSCCSSSEEECSSSCCEEEHHHHHH--HEETTTTEEBCSSSCCBCEEC
T ss_pred             HHHcCCCCCccCCCCCchhccHHHhH--hhcCCCCCEECCCCCCccccC
Confidence            46799999999999999998 66665  678889999999999998765

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=98.87  E-value=2e-09  Score=57.38  Aligned_cols=46  Identities=22%  Similarity=0.370  Sum_probs=34.2

Q ss_pred             cccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChh-hHHHHH
Q 032068            9 TKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRK-YAEEHF   54 (148)
Q Consensus         9 ~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~-~l~~h~   54 (148)
                      ||.|..|++.|. ...|..| ..|.+++++.|+.|++.|... .|..|+
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   49 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHM   49 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHH
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHH
Confidence            577888888888 8888888 577777777777777777666 455554

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=9.9e-10  Score=54.91  Aligned_cols=38  Identities=16%  Similarity=0.328  Sum_probs=35.2

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERC   38 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C   38 (148)
                      +++|++++||.|..|++.|. .++|..| ..|.+++||.|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            3 SGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             ccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            57899999999999999999 9999999 69999999877

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=7.7e-10  Score=55.93  Aligned_cols=39  Identities=13%  Similarity=0.250  Sum_probs=35.9

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCK   39 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~   39 (148)
                      +++|++++||.|..|++.|. ...|..| ..|.++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            4 GSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             ccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            57899999999999999999 9999999 699999999884

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.86  E-value=1.5e-09  Score=54.27  Aligned_cols=38  Identities=13%  Similarity=0.356  Sum_probs=35.2

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERC   38 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C   38 (148)
                      +++|++++||.|..|++.|. .++|..| +.|.+++||.|
T Consensus         3 ~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            3 SGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            46899999999999999999 9999999 69999999887

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.86  E-value=1.8e-09  Score=67.31  Aligned_cols=69  Identities=14%  Similarity=0.160  Sum_probs=55.4

Q ss_pred             CCCC-cchHHHHHhhcCCCCccccccCCccChh-hHHHHHHcCCCCccCccchhccch-HHHHhhHhhcCCC
Q 032068           17 RAIP-SSNIDLHFAHCSRNLERCKVCGDMVPRK-YAEEHFLNTHAPVACSQCSETMER-EILAIHKGENCPQ   85 (148)
Q Consensus        17 ~~~~-~~~l~~H~~~~~~~~~~C~~C~~~f~~~-~l~~h~~~~h~~~~C~~C~~~~~~-~~l~~h~~~~~~~   85 (148)
                      ..|. ...|..|+.|.+++||.|+.|++.|... .|..|...-.++|.|+.|++.|.. ..|..|+++|.+.
T Consensus        55 ~~~~~~~~l~~h~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           55 QLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             GGTTTHHHHHHHHHHHHHCSEECTTTCCEESSHHHHHHHHHHTCCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             cccCCHHHHHHHHHhCCCCCeECCCCCcccCCHhHHHHHHHHCCCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            3445 5566666778889999999999999988 577775321259999999999988 9999999988875

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.86  E-value=9.3e-10  Score=56.84  Aligned_cols=41  Identities=10%  Similarity=0.237  Sum_probs=38.0

Q ss_pred             ccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCC
Q 032068            3 MTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGD   43 (148)
Q Consensus         3 ~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~   43 (148)
                      .+.++++|.|..|++.|. ...|..| +.|.++++|.|+.|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            578899999999999999 9999999 6999999999999974

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.1e-09  Score=55.91  Aligned_cols=40  Identities=20%  Similarity=0.331  Sum_probs=36.8

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKV   40 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~   40 (148)
                      +++|++++||.|..|++.|. ...|..| ..|.++++|.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            4 GSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             cccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56899999999999999999 9999999 6999999999863

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.4e-09  Score=55.46  Aligned_cols=39  Identities=18%  Similarity=0.305  Sum_probs=36.2

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCK   39 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~   39 (148)
                      +++|++++||.|..|++.|. ..+|..| +.|.+++||.|+
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            4 GSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             ccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            46899999999999999999 9999999 699999999986

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.4e-09  Score=55.48  Aligned_cols=39  Identities=15%  Similarity=0.175  Sum_probs=36.1

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCK   39 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~   39 (148)
                      +++|++++||.|..|++.|. ..+|..| ..|.++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            4 GSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            46899999999999999999 9999999 699999999986

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=1.6e-09  Score=55.38  Aligned_cols=39  Identities=15%  Similarity=0.259  Sum_probs=36.2

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcC-CCCcccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCS-RNLERCK   39 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~-~~~~~C~   39 (148)
                      +++|++++||.|..|++.|. ...|..| +.|.+ +++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            4 GSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             ccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            57899999999999999999 9999999 69999 9999986

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=98.84  E-value=1.8e-09  Score=62.75  Aligned_cols=50  Identities=22%  Similarity=0.450  Sum_probs=45.6

Q ss_pred             CCccCcc--chhccch-HHHHhhHhhcCCCCcccCC--CCCCCCC-hhhHHHHHHH
Q 032068           59 APVACSQ--CSETMER-EILAIHKGENCPQRIVTCD--FCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        59 ~~~~C~~--C~~~~~~-~~l~~h~~~~~~~~~~~C~--~C~~~f~-~~~l~~H~~~  108 (148)
                      .+|.|+.  |++.|.. ..|..|++.|.++++|.|+  .|++.|. ...|..|+++
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~   59 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK   59 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHH
Confidence            4788988  9999987 9999999999999999997  5999999 9999999876

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.84  E-value=1.1e-09  Score=61.42  Aligned_cols=49  Identities=22%  Similarity=0.512  Sum_probs=44.4

Q ss_pred             CCccCcc--chhccch-HHHHhhHhhcCCCCcccCCC--CCCCCC-hhhHHHHHH
Q 032068           59 APVACSQ--CSETMER-EILAIHKGENCPQRIVTCDF--CEFPLP-AVDLAEHQV  107 (148)
Q Consensus        59 ~~~~C~~--C~~~~~~-~~l~~h~~~~~~~~~~~C~~--C~~~f~-~~~l~~H~~  107 (148)
                      ++|.|..  |++.|.. ..|..|+++|.+++||.|+.  |++.|. ...|..|++
T Consensus        16 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~   70 (72)
T 2epa_A           16 RSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR   70 (72)
T ss_dssp             CCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred             CceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhh
Confidence            4889977  9999987 99999999999999999965  999999 999999975

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=2.1e-09  Score=55.26  Aligned_cols=40  Identities=15%  Similarity=0.228  Sum_probs=37.1

Q ss_pred             CccCCCCcccCC--CCCCCCC-cchHHHH-HhhcCCCCcccccc
Q 032068            2 AMTSDETTKICS--HCDRAIP-SSNIDLH-FAHCSRNLERCKVC   41 (148)
Q Consensus         2 ~~h~~~~~~~C~--~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C   41 (148)
                      ++|++++||.|.  .|++.|. ...|..| +.|.++++|.|..|
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            689999999998  8999999 9999999 69999999999876

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.82  E-value=1.8e-09  Score=55.67  Aligned_cols=37  Identities=19%  Similarity=0.218  Sum_probs=34.6

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEF   95 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C~~   95 (148)
                      ++|.|..|++.|.. ..|..|+++|.+++||.|+.|++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A           11 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             cCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            58999999999988 99999999999999999999985

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.7e-09  Score=55.21  Aligned_cols=39  Identities=18%  Similarity=0.326  Sum_probs=36.2

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCK   39 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~   39 (148)
                      +++|++++||.|..|++.|. ...|..| ..|.++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            4 GSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             ccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            46899999999999999999 9999999 699999999986

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=2.3e-09  Score=53.31  Aligned_cols=37  Identities=16%  Similarity=0.341  Sum_probs=34.5

Q ss_pred             CccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccc
Q 032068            2 AMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERC   38 (148)
Q Consensus         2 ~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C   38 (148)
                      ++|++++||.|..|++.|. ..+|..| ..|.+++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            5899999999999999999 9999999 69999999877

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.7e-09  Score=54.94  Aligned_cols=40  Identities=15%  Similarity=0.270  Sum_probs=36.3

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKV   40 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~   40 (148)
                      .++|++++||.|..|++.|. ..+|..| +.|.++++|.|+.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            35799999999999999999 9999999 6999999999863

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.6e-09  Score=54.78  Aligned_cols=39  Identities=15%  Similarity=0.264  Sum_probs=35.9

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCcccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCK   39 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~   39 (148)
                      +++|++++||.|..|++.|. ...|..| ..|.++++|.|.
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            4 GSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            56899999999999999999 9999999 699999999874

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=1.3e-09  Score=61.91  Aligned_cols=52  Identities=25%  Similarity=0.425  Sum_probs=27.1

Q ss_pred             ccCCCCcccCCCCCCCCCcchHHHHHhhcCCCCccccccCCccChhhHHHHH
Q 032068            3 MTSDETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHF   54 (148)
Q Consensus         3 ~h~~~~~~~C~~C~~~~~~~~l~~H~~~~~~~~~~C~~C~~~f~~~~l~~h~   54 (148)
                      ++.+++|+.|..|++.|...+|..|+.+++++|+.|+.|++.|...++..|.
T Consensus        11 ~~c~~r~~~C~~C~~~~~~~~L~~H~~~c~~~~~~C~~C~~~~~~~~l~~H~   62 (75)
T 2d9k_A           11 TECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLVKDLKTHP   62 (75)
T ss_dssp             CCCCCCCEECSSSCCEECHHHHHHHHHHHHHCEEECSSSCCEEETTGGGTHH
T ss_pred             ccCCCcccCCcccChHhhHHHHHHHHhHcCCCceEcccCCCcCcHHHHHHHH
Confidence            3455555555555555555555555445555555555555554444444443

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=3.7e-09  Score=53.45  Aligned_cols=38  Identities=21%  Similarity=0.253  Sum_probs=35.0

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERC   38 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C   38 (148)
                      +++|++++||.|..|++.|. .+.|..| ..|.+++++.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            4 GSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            57899999999999999999 9999999 69999998876

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=2.4e-09  Score=59.06  Aligned_cols=48  Identities=25%  Similarity=0.499  Sum_probs=23.9

Q ss_pred             CCCCcccCCCCCCCCCcchHHHH-HhhcCCCCcccc-ccCCccChh-hHHHH
Q 032068            5 SDETTKICSHCDRAIPSSNIDLH-FAHCSRNLERCK-VCGDMVPRK-YAEEH   53 (148)
Q Consensus         5 ~~~~~~~C~~C~~~~~~~~l~~H-~~~~~~~~~~C~-~C~~~f~~~-~l~~h   53 (148)
                      .+++||.|..|++.|..++|..| +. ++++|+.|+ .|++.|... .|..|
T Consensus         6 C~~~~~~C~~C~k~f~~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H   56 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFVFDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGH   56 (66)
T ss_dssp             CCCCEEECSSSCCEEEHHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHH
T ss_pred             CCCCCeeccccCCccCHHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHH
Confidence            44555555555555554445555 34 455555555 455554444 33334

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=98.73  E-value=6.8e-09  Score=61.59  Aligned_cols=63  Identities=16%  Similarity=0.337  Sum_probs=52.3

Q ss_pred             CCccCcc--chhccch-HHHHhhHhhcCCCCcccCC--CCCCCCC-hhhHHHHHHH-----------hcccccCCcchhh
Q 032068           59 APVACSQ--CSETMER-EILAIHKGENCPQRIVTCD--FCEFPLP-AVDLAEHQVA-----------IVNNFENGKTIAD  121 (148)
Q Consensus        59 ~~~~C~~--C~~~~~~-~~l~~h~~~~~~~~~~~C~--~C~~~f~-~~~l~~H~~~-----------c~~~~~~~~~~~~  121 (148)
                      ++|.|..  |++.|.. ..|..|++.|.++++|.|+  .|++.|. ...|..|+++           |++.|.....|..
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   93 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLAL   93 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHH
T ss_pred             cceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHH
Confidence            4788985  9999987 9999999999999999997  5999999 9999999886           5666655544443

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.72  E-value=1.8e-08  Score=59.29  Aligned_cols=50  Identities=14%  Similarity=0.098  Sum_probs=45.3

Q ss_pred             CccCccchhccch-HHHHhhHhh-cCCCCc--------ccCCCCCCCCC-hhhHHHHHHHh
Q 032068           60 PVACSQCSETMER-EILAIHKGE-NCPQRI--------VTCDFCEFPLP-AVDLAEHQVAI  109 (148)
Q Consensus        60 ~~~C~~C~~~~~~-~~l~~h~~~-~~~~~~--------~~C~~C~~~f~-~~~l~~H~~~c  109 (148)
                      .+.|..|++.|.. ..|..|+++ |.++++        |.|+.|++.|. ...|..|+++.
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H   85 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH   85 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHH
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhc
Confidence            5679999999988 999999987 888887        99999999999 99999999874

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.70  E-value=7.1e-09  Score=52.59  Aligned_cols=36  Identities=14%  Similarity=0.230  Sum_probs=33.0

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFCE   94 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C~   94 (148)
                      ++|.|..|++.|.. +.|..|+++|.++++|.|+.||
T Consensus         9 k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            9 KPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            58999999999977 8999999999999999999986

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=4.2e-10  Score=63.04  Aligned_cols=59  Identities=14%  Similarity=0.225  Sum_probs=48.0

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHHHhhcCCCCccccccCCccChh-hHHHHHHcCC---CCccCccc
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLHFAHCSRNLERCKVCGDMVPRK-YAEEHFLNTH---APVACSQC   66 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H~~~~~~~~~~C~~C~~~f~~~-~l~~h~~~~h---~~~~C~~C   66 (148)
                      +++|++++||.|..|++.|. ...|..      ++++.|+.|++.|... .+..|. ..|   ++|.|+.|
T Consensus        10 ~~~h~~~~~~~C~~C~k~f~~~~~l~~------~~~~~C~~C~~~f~~~~~l~~H~-~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           10 QKIHLGDRSQKCSKCGIIFIRRSTLSR------RKTPMCEKCRKDSCQEAALNKDE-GNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCCCCCSEEECSSSCCEEECCCCCCC------SSSCCCHHHHHTCSCCCSSCCCS-SCCCCCCCSSCCCC
T ss_pred             HHHhCCCCCeeCCcccchhCCHHHhCc------CCCCCCCCCChhhcCHHHHHHHH-HhhcCCCCCCCCCC
Confidence            46899999999999999999 777654      7899999999999887 555564 444   48888876

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=1.2e-08  Score=49.41  Aligned_cols=35  Identities=14%  Similarity=0.222  Sum_probs=31.7

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCC
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNL   35 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~   35 (148)
                      |++|++++||.|..|++.|. ..+|..| ..|.+++|
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            57899999999999999999 9999999 68888764

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=1.4e-08  Score=51.66  Aligned_cols=35  Identities=20%  Similarity=0.400  Sum_probs=30.4

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A           11 KPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             cCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            48888889999877 888999999999999999876

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=1.3e-08  Score=51.81  Aligned_cols=35  Identities=17%  Similarity=0.324  Sum_probs=29.9

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|..|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A           11 KPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             SSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            47888888888877 888889888999999998876

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=1.6e-08  Score=51.43  Aligned_cols=35  Identities=14%  Similarity=0.238  Sum_probs=29.8

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A           11 KLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            47888888888877 888888888899999998876

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.65  E-value=1.6e-08  Score=51.46  Aligned_cols=35  Identities=11%  Similarity=0.240  Sum_probs=29.9

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A           11 KTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             cCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            47888888888877 888889888999999998876

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=1.6e-08  Score=51.49  Aligned_cols=35  Identities=20%  Similarity=0.377  Sum_probs=30.0

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A           11 KPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            47888888888877 888889888999999998876

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=1.7e-08  Score=51.37  Aligned_cols=35  Identities=14%  Similarity=0.214  Sum_probs=29.3

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A           11 KPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            47888888888877 888888888888888888876

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.65  E-value=1.5e-08  Score=51.60  Aligned_cols=35  Identities=14%  Similarity=0.301  Sum_probs=28.5

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A           11 KPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            47888888888877 788888888888888888776

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.65  E-value=1.4e-08  Score=51.72  Aligned_cols=35  Identities=17%  Similarity=0.362  Sum_probs=28.5

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A           11 KPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            47888888888877 788888888888888888776

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=1.4e-08  Score=51.69  Aligned_cols=35  Identities=14%  Similarity=0.305  Sum_probs=31.9

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A           11 KPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            48999999999988 899999999999999999887

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=1.5e-08  Score=51.60  Aligned_cols=35  Identities=17%  Similarity=0.364  Sum_probs=30.3

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A           11 KPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            48888889888877 888899989999999999876

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=1.7e-08  Score=51.32  Aligned_cols=35  Identities=23%  Similarity=0.356  Sum_probs=28.9

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A           11 KPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            47888888888877 888888888888888888876

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=1.4e-08  Score=51.62  Aligned_cols=35  Identities=17%  Similarity=0.283  Sum_probs=30.8

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 ~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A           11 KPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            48889999999977 889999999999999999876

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.64  E-value=1.4e-08  Score=51.60  Aligned_cols=35  Identities=23%  Similarity=0.367  Sum_probs=30.8

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A           11 KPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             CceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            48889999999977 889999999999999999876

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.64  E-value=1.6e-08  Score=51.48  Aligned_cols=35  Identities=20%  Similarity=0.332  Sum_probs=30.9

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. ..|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A           11 NPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            48889999999977 889999999999999999876

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=1.5e-08  Score=51.60  Aligned_cols=35  Identities=14%  Similarity=0.175  Sum_probs=30.9

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A           11 KPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             cCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            48889999999977 889999999999999999876

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=1.4e-08  Score=51.72  Aligned_cols=35  Identities=14%  Similarity=0.315  Sum_probs=30.3

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A           11 KPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            48888889888877 888899989999999999876

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=1.8e-08  Score=51.27  Aligned_cols=35  Identities=14%  Similarity=0.228  Sum_probs=29.8

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|..|++.|.. ..|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A           11 KPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            47888888888877 888888888889999998876

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=1.7e-08  Score=51.29  Aligned_cols=35  Identities=17%  Similarity=0.326  Sum_probs=29.4

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A           11 KPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             cCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            47888888888877 888888888888888888876

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=1.4e-08  Score=51.75  Aligned_cols=35  Identities=11%  Similarity=0.157  Sum_probs=30.5

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A           11 KSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            48889999999977 889999989999999999876

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=1.5e-08  Score=51.59  Aligned_cols=35  Identities=14%  Similarity=0.340  Sum_probs=30.5

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A           11 KHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             CCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            48889999999977 889999999999999999876

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=1.9e-08  Score=51.13  Aligned_cols=35  Identities=14%  Similarity=0.276  Sum_probs=29.3

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|..|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A           11 KPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            47888888888877 888888888888889888876

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=1.5e-08  Score=51.55  Aligned_cols=35  Identities=20%  Similarity=0.309  Sum_probs=30.5

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A           11 KPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            48889999999977 889999989999999999876

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.63  E-value=3.2e-08  Score=55.25  Aligned_cols=52  Identities=27%  Similarity=0.436  Sum_probs=43.6

Q ss_pred             ccCCCCcccCCC--CCCCCC-cchHHHH-HhhcCCCCccccc--cCCccChh-hHHHHH
Q 032068            3 MTSDETTKICSH--CDRAIP-SSNIDLH-FAHCSRNLERCKV--CGDMVPRK-YAEEHF   54 (148)
Q Consensus         3 ~h~~~~~~~C~~--C~~~~~-~~~l~~H-~~~~~~~~~~C~~--C~~~f~~~-~l~~h~   54 (148)
                      .....++|.|..  |++.|. ...|..| +.|.++++|.|+.  |++.|... .|..|.
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~   69 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHR   69 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHT
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHh
Confidence            456788999987  999999 9999999 6999999999964  99999877 566664

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=1.7e-08  Score=51.36  Aligned_cols=35  Identities=11%  Similarity=0.216  Sum_probs=30.3

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A           11 KPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            48888889888877 888899989999999999876

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=1.5e-08  Score=51.55  Aligned_cols=35  Identities=23%  Similarity=0.337  Sum_probs=29.8

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|..|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A           11 KPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             cCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            47888888888877 888888888999999998876

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=1.5e-08  Score=51.55  Aligned_cols=35  Identities=14%  Similarity=0.268  Sum_probs=29.5

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A           11 RPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            47888888888877 888888888888889988876

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=1.4e-08  Score=51.62  Aligned_cols=35  Identities=17%  Similarity=0.335  Sum_probs=29.2

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|..|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A           11 NPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             cCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            47888888888877 888888888888888888876

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=1.9e-08  Score=51.08  Aligned_cols=35  Identities=14%  Similarity=0.221  Sum_probs=30.2

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. ..|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A           11 KPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            48888888888877 888899989999999999876

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=1.5e-08  Score=51.06  Aligned_cols=35  Identities=17%  Similarity=0.377  Sum_probs=29.9

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            9 KPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            47888888888877 888889888899999988876

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=1.8e-08  Score=51.24  Aligned_cols=35  Identities=14%  Similarity=0.335  Sum_probs=29.9

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A           11 KPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            47888888888877 888888888889999988876

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.62  E-value=1.8e-08  Score=51.25  Aligned_cols=35  Identities=14%  Similarity=0.292  Sum_probs=30.4

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A           11 KPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             cCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            48888889989877 888999989999999999876

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=1.7e-08  Score=51.32  Aligned_cols=35  Identities=17%  Similarity=0.349  Sum_probs=29.8

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A           11 KPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            47888888888877 888889888899999988876

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=1.7e-08  Score=51.30  Aligned_cols=35  Identities=14%  Similarity=0.255  Sum_probs=30.2

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A           11 KSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            47888888888877 888899988999999999876

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=1.5e-08  Score=51.51  Aligned_cols=35  Identities=17%  Similarity=0.276  Sum_probs=31.1

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A           11 KPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            48899999999977 889999999999999999876

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=1.5e-08  Score=51.57  Aligned_cols=35  Identities=17%  Similarity=0.244  Sum_probs=28.5

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|..|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A           11 KPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            47888888888877 788888888888888888776

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=1.8e-08  Score=51.25  Aligned_cols=35  Identities=17%  Similarity=0.144  Sum_probs=29.6

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A           11 KSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            47888888888877 888888888888999988876

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=1.8e-08  Score=51.22  Aligned_cols=35  Identities=14%  Similarity=0.248  Sum_probs=29.3

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A           11 KPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            47888888888877 888888888888888888876

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.60  E-value=1.9e-08  Score=51.16  Aligned_cols=35  Identities=14%  Similarity=0.264  Sum_probs=29.6

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A           11 KRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             cCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            47888888888877 888888888888899988876

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=2.4e-08  Score=50.75  Aligned_cols=35  Identities=17%  Similarity=0.268  Sum_probs=28.8

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|..|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A           11 KPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            47888888888877 888888888888888888765

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=2.1e-08  Score=50.97  Aligned_cols=35  Identities=14%  Similarity=0.303  Sum_probs=31.4

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. ..|..|+++|.+++||.|+.|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A           11 KPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            58899999999987 899999999999999999876

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=1.7e-08  Score=51.32  Aligned_cols=35  Identities=20%  Similarity=0.438  Sum_probs=30.4

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A           11 KPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             cCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            48888899999977 888999999999999999876

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=1.5e-08  Score=51.58  Aligned_cols=35  Identities=17%  Similarity=0.336  Sum_probs=29.5

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A           11 KPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            47888888888877 888888888888888888876

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=2.1e-08  Score=50.98  Aligned_cols=35  Identities=14%  Similarity=0.305  Sum_probs=30.7

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A           11 KPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            48889999999977 889999999999999999876

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=1.4e-08  Score=51.65  Aligned_cols=35  Identities=17%  Similarity=0.324  Sum_probs=26.8

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A           11 RPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            47777777777766 777788777888888887765

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=1.6e-08  Score=51.49  Aligned_cols=35  Identities=14%  Similarity=0.271  Sum_probs=27.8

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|..|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A           11 KPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            47788888888876 788888888888888888766

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=3.3e-08  Score=50.41  Aligned_cols=35  Identities=14%  Similarity=0.199  Sum_probs=28.8

Q ss_pred             CCccCccchhccch-HHHHhhHh-hcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKG-ENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~-~~~~~~~~~C~~C   93 (148)
                      ++|.|..|++.|.. +.|..|++ +|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A           11 KPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             CCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            47888888888877 88888888 8888888888876

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=1.6e-08  Score=51.43  Aligned_cols=35  Identities=14%  Similarity=0.241  Sum_probs=27.3

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|..|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A           11 RPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            47778888888876 778888888888888888765

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=1.5e-08  Score=51.51  Aligned_cols=35  Identities=17%  Similarity=0.310  Sum_probs=28.4

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A           11 KPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             SSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            47888888888877 788888888888888888776

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=3.2e-08  Score=50.29  Aligned_cols=35  Identities=14%  Similarity=0.271  Sum_probs=28.6

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|..|++.|.. +.|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A           11 KPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            47888888888877 888888888888888888764

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=1.6e-08  Score=51.44  Aligned_cols=35  Identities=17%  Similarity=0.233  Sum_probs=28.9

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|..|++.|.. ..|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A           11 KPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            47888888888877 888888888888888888876

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.53  E-value=4.3e-08  Score=48.01  Aligned_cols=35  Identities=17%  Similarity=0.209  Sum_probs=31.3

Q ss_pred             cCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccc
Q 032068            4 TSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERC   38 (148)
Q Consensus         4 h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C   38 (148)
                      |++++||.|..|++.|. .+.|..| ..|.+++++.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            67899999999999999 9999999 69999988865

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=5.8e-08  Score=49.32  Aligned_cols=35  Identities=17%  Similarity=0.275  Sum_probs=27.4

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|+.|++.|.. ..|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A           11 KPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            47788888888876 788888888888888888754

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.47  E-value=9.1e-08  Score=45.41  Aligned_cols=33  Identities=15%  Similarity=0.205  Sum_probs=29.1

Q ss_pred             ccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCC
Q 032068            3 MTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNL   35 (148)
Q Consensus         3 ~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~   35 (148)
                      +|++++||.|..|++.|. .++|..| +.|.+++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            588999999999999999 9999999 68887653

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.47  E-value=2.3e-08  Score=52.73  Aligned_cols=40  Identities=13%  Similarity=0.184  Sum_probs=29.0

Q ss_pred             ccch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           69 TMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        69 ~~~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      .|.. ..|..|+++|.+++||.|+.|++.|. .+.|..|+++
T Consensus         5 ~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~   46 (54)
T 1yui_A            5 RAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             CCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             ccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHH
Confidence            4444 55667777777778888888888777 7777777765

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.46  E-value=9.4e-08  Score=47.84  Aligned_cols=34  Identities=12%  Similarity=0.199  Sum_probs=27.7

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDF   92 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~   92 (148)
                      ++|.|..|++.|.. +.|..|+++|.+++||.|++
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            9 GAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            47888888888877 88888888888888888863

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.45  E-value=1.5e-07  Score=52.01  Aligned_cols=38  Identities=26%  Similarity=0.196  Sum_probs=33.7

Q ss_pred             ccCCCCcccCCC--CCCCCC-cchHHHH-H-hhcCCCCccccc
Q 032068            3 MTSDETTKICSH--CDRAIP-SSNIDLH-F-AHCSRNLERCKV   40 (148)
Q Consensus         3 ~h~~~~~~~C~~--C~~~~~-~~~l~~H-~-~~~~~~~~~C~~   40 (148)
                      .++++|||.|..  |+++|. .++|..| + .|.+++|+.|..
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            368999999965  999999 9999999 5 799999999875

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=1.1e-07  Score=48.24  Aligned_cols=34  Identities=24%  Similarity=0.355  Sum_probs=24.6

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDF   92 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~   92 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A           11 KPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46777777777766 77777777777777777753

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=1.2e-07  Score=48.13  Aligned_cols=34  Identities=18%  Similarity=0.409  Sum_probs=25.9

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDF   92 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~   92 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A           11 KPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             cCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            47777778877766 77788887888888887763

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.44  E-value=1e-07  Score=47.29  Aligned_cols=33  Identities=21%  Similarity=0.487  Sum_probs=25.9

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCD   91 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~   91 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            9 NPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            47788888888876 7788888888888888774

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.44  E-value=1.6e-07  Score=45.16  Aligned_cols=32  Identities=25%  Similarity=0.437  Sum_probs=27.8

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcC
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCS   32 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~   32 (148)
                      +++|++++||.|..|++.|. ...|..| ..|.+
T Consensus         3 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            3 TRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             SSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            46899999999999999999 9999999 57754

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.44  E-value=1.1e-07  Score=45.19  Aligned_cols=33  Identities=21%  Similarity=0.264  Sum_probs=29.0

Q ss_pred             ccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCC
Q 032068            3 MTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNL   35 (148)
Q Consensus         3 ~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~   35 (148)
                      +|++++||.|..|++.|. .+.|..| +.|.+++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            588999999999999999 9999999 68877653

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.43  E-value=1.4e-07  Score=47.80  Aligned_cols=34  Identities=18%  Similarity=0.365  Sum_probs=26.8

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDF   92 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~   92 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A           11 KPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47788888888877 78888888888888888763

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.43  E-value=1.1e-07  Score=45.84  Aligned_cols=31  Identities=16%  Similarity=0.246  Sum_probs=27.4

Q ss_pred             hHhhcCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           78 HKGENCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        78 h~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      |.++|.+++||.|+.|++.|. .+.|..|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~   33 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR   33 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGG
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHH
Confidence            667889999999999999999 8999999764

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.43  E-value=1.2e-07  Score=48.14  Aligned_cols=34  Identities=18%  Similarity=0.304  Sum_probs=27.3

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDF   92 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~   92 (148)
                      ++|.|+.|++.|.. ..|..|+++|.+++||.|+.
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A           11 KPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             cccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            47888888888877 78888888888888888863

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=1e-07  Score=48.35  Aligned_cols=34  Identities=18%  Similarity=0.345  Sum_probs=27.1

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDF   92 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~   92 (148)
                      ++|.|..|++.|.. +.|..|+++|.+++||.|+.
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A           11 RHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47888888888877 78888888888888888863

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=1.4e-07  Score=47.79  Aligned_cols=34  Identities=24%  Similarity=0.399  Sum_probs=26.5

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDF   92 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~   92 (148)
                      ++|.|..|++.|.. ..|..|+++|.+++||.|+.
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A           11 NPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788888888876 77888888888888888763

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=9.7e-08  Score=48.46  Aligned_cols=34  Identities=15%  Similarity=0.348  Sum_probs=24.8

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDF   92 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~   92 (148)
                      ++|.|..|++.|.. +.|..|+++|.+++||.|+.
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A           11 RPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             cCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36777777777766 77777777777777777753

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=1.4e-07  Score=47.87  Aligned_cols=34  Identities=12%  Similarity=0.208  Sum_probs=25.9

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDF   92 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~   92 (148)
                      ++|.|..|++.|.. +.|..|+++|.+++||.|+.
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A           11 KCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47777788888766 77788887888888887753

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=1.3e-07  Score=47.91  Aligned_cols=33  Identities=21%  Similarity=0.473  Sum_probs=24.9

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCD   91 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~   91 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A           11 KPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             cCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            47777777777766 7777777777788887775

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=1.6e-07  Score=47.62  Aligned_cols=34  Identities=15%  Similarity=0.311  Sum_probs=27.9

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDF   92 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~   92 (148)
                      ++|.|..|++.|.. ..|..|+++|.+++||.|+.
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A           11 KPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             SSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47888888888877 88888888888888888863

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.41  E-value=1.2e-07  Score=48.01  Aligned_cols=34  Identities=18%  Similarity=0.413  Sum_probs=26.7

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDF   92 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~   92 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A           11 KPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788888888877 78888888888888888763

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.41  E-value=1.7e-07  Score=46.48  Aligned_cols=32  Identities=22%  Similarity=0.431  Sum_probs=21.6

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTC   90 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C   90 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            9 KPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            36666667666665 666667767777777666

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.41  E-value=1.7e-07  Score=47.43  Aligned_cols=33  Identities=18%  Similarity=0.396  Sum_probs=25.4

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCD   91 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~   91 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A           11 KPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             CCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            47777777777766 7777888788888888775

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.40  E-value=5.5e-08  Score=52.89  Aligned_cols=40  Identities=23%  Similarity=0.369  Sum_probs=31.5

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhh
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVD  101 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~  101 (148)
                      ++|.|+.|++.|.. ..|.   ++|.+++||.|+.|++.|. ..+
T Consensus        13 k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~   54 (62)
T 1vd4_A           13 ASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDES   54 (62)
T ss_dssp             SEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTT
T ss_pred             CCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcc
Confidence            47888888888877 6665   5788999999999999887 443

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=1.3e-07  Score=47.84  Aligned_cols=34  Identities=15%  Similarity=0.316  Sum_probs=27.6

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDF   92 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~   92 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A           11 KPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             cCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            47888888888877 88888888888888888863

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=1.3e-07  Score=47.98  Aligned_cols=34  Identities=21%  Similarity=0.361  Sum_probs=25.9

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDF   92 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~   92 (148)
                      ++|.|..|++.|.. +.|..|+++|.+++||.|+.
T Consensus        11 ~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A           11 KPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             cCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47778788888866 77788887888888887753

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=1.4e-07  Score=48.15  Aligned_cols=35  Identities=20%  Similarity=0.335  Sum_probs=30.6

Q ss_pred             CCccCc--cchhccch-HHHHhhHhhcCCCCcccCCCC
Q 032068           59 APVACS--QCSETMER-EILAIHKGENCPQRIVTCDFC   93 (148)
Q Consensus        59 ~~~~C~--~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C   93 (148)
                      ++|.|.  .|++.|.. ..|..|+++|.+++||.|+.|
T Consensus        11 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A           11 KPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            488887  89999977 889999999999999999876

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=1.5e-07  Score=47.13  Aligned_cols=33  Identities=18%  Similarity=0.440  Sum_probs=23.1

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCD   91 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~   91 (148)
                      ++|.|..|++.|.. +.|..|+++|.+++||.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A           11 KPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             cCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            36777777777766 6777777777777777763

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.39  E-value=1.6e-07  Score=47.61  Aligned_cols=33  Identities=15%  Similarity=0.360  Sum_probs=24.1

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCD   91 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~   91 (148)
                      ++|.|..|++.|.. +.|..|+++|.+++||.|+
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A           11 KLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            36777777777766 7777777777777777775

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.39  E-value=1.3e-07  Score=47.88  Aligned_cols=33  Identities=21%  Similarity=0.490  Sum_probs=24.7

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCD   91 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~   91 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A           11 KPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            46777777777766 7777777777777777775

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.39  E-value=1.3e-07  Score=47.97  Aligned_cols=33  Identities=18%  Similarity=0.402  Sum_probs=23.9

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCD   91 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~   91 (148)
                      ++|.|+.|++.|.. ..|..|+++|.+++||.|+
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A           11 KPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            36777777777766 7777777777777777775

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.39  E-value=1.1e-07  Score=48.01  Aligned_cols=34  Identities=15%  Similarity=0.345  Sum_probs=29.2

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDF   92 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~   92 (148)
                      ++|.|..|++.|.. ..|..|+++|.+++||.|+.
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A           11 KPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             cCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            48889999999977 88999999999999998863

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.39  E-value=2e-07  Score=46.20  Aligned_cols=32  Identities=19%  Similarity=0.377  Sum_probs=24.7

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTC   90 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C   90 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|
T Consensus        10 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A           10 KPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            47778788888876 778888888888888776

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.39  E-value=1.9e-07  Score=47.33  Aligned_cols=34  Identities=15%  Similarity=0.333  Sum_probs=26.2

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDF   92 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~   92 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+.
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A           11 KPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             SSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             cCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            47778888888876 77888888888888887753

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.39  E-value=6.8e-08  Score=50.91  Aligned_cols=34  Identities=21%  Similarity=0.245  Sum_probs=23.0

Q ss_pred             ccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCc
Q 032068            3 MTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLE   36 (148)
Q Consensus         3 ~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~   36 (148)
                      +|++++||.|..|++.|. .++|..| ..|.+++||
T Consensus        18 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A           18 RSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             HHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             hcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            566677777777777777 6777777 466666554

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=1.5e-07  Score=46.47  Aligned_cols=32  Identities=13%  Similarity=0.319  Sum_probs=25.9

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTC   90 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C   90 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            9 RVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            47888888888877 788888888888888876

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.39  E-value=1.9e-07  Score=47.28  Aligned_cols=33  Identities=15%  Similarity=0.345  Sum_probs=25.4

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCD   91 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~   91 (148)
                      ++|.|..|++.|.. ..|..|+++|.+++||.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A           11 KPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            47777778777766 7777888778888888775

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=1.6e-07  Score=47.60  Aligned_cols=33  Identities=12%  Similarity=0.193  Sum_probs=26.3

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCD   91 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~   91 (148)
                      ++|.|..|++.|.. ..|..|+++|.+++||.|+
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A           11 RGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             SSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            47788888888876 7888888888888888875

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=1.6e-07  Score=47.16  Aligned_cols=33  Identities=12%  Similarity=0.344  Sum_probs=22.9

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCD   91 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~   91 (148)
                      ++|.|..|++.|.. ..|..|+++|.+++||.|+
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A           11 TTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             cCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            36677777777766 6777777777777777663

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.38  E-value=1.5e-07  Score=47.12  Aligned_cols=33  Identities=15%  Similarity=0.427  Sum_probs=22.2

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCD   91 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~   91 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A           11 KPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            36667777777765 6677777777777777663

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.38  E-value=1.8e-07  Score=47.41  Aligned_cols=33  Identities=15%  Similarity=0.327  Sum_probs=25.8

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCD   91 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~   91 (148)
                      ++|.|..|++.|.. +.|..|+++|.+++||.|+
T Consensus        11 ~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A           11 RHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            47778888888876 7788888888888888775

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=1.6e-07  Score=45.36  Aligned_cols=32  Identities=19%  Similarity=0.295  Sum_probs=28.5

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-H-hhcC
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-F-AHCS   32 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~-~~~~   32 (148)
                      |++|++++||.|..|++.|. .+.|..| + .|.+
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            67899999999999999999 9999999 6 6654

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=2.9e-07  Score=44.25  Aligned_cols=32  Identities=25%  Similarity=0.383  Sum_probs=28.9

Q ss_pred             CccCCCCcccCCCCCCCCC-c-chHHHH-HhhcCC
Q 032068            2 AMTSDETTKICSHCDRAIP-S-SNIDLH-FAHCSR   33 (148)
Q Consensus         2 ~~h~~~~~~~C~~C~~~~~-~-~~l~~H-~~~~~~   33 (148)
                      ++|++++||.|..|++.|. . ++|..| ..|.++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            6899999999999999999 8 899999 688765

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.36  E-value=6.8e-08  Score=56.42  Aligned_cols=42  Identities=21%  Similarity=0.350  Sum_probs=36.3

Q ss_pred             CccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCC
Q 032068            2 AMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGD   43 (148)
Q Consensus         2 ~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~   43 (148)
                      ++|++++||.|..|++.|. ..+|..| +.|.+++|+.|..|..
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~   61 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER   61 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh
Confidence            4688999999999999999 9999999 6899888998876653

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.35  E-value=1.9e-07  Score=47.27  Aligned_cols=33  Identities=15%  Similarity=0.363  Sum_probs=25.8

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCD   91 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~   91 (148)
                      ++|.|..|++.|.. +.|..|+++|.+++||.|+
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A           11 KPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            47778888888876 7788888888888888775

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.35  E-value=1.8e-07  Score=47.42  Aligned_cols=33  Identities=27%  Similarity=0.490  Sum_probs=23.7

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCD   91 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~   91 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A           11 KPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            36777777777766 6777777777777777775

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=2e-07  Score=46.23  Aligned_cols=32  Identities=16%  Similarity=0.290  Sum_probs=20.7

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTC   90 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C   90 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|
T Consensus        10 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A           10 KPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            36666666666655 666666666666666655

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=2e-07  Score=47.26  Aligned_cols=33  Identities=15%  Similarity=0.288  Sum_probs=26.6

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCC-CCcccCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCP-QRIVTCD   91 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~-~~~~~C~   91 (148)
                      ++|.|..|++.|.. +.|..|+++|.+ ++||.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A           11 KCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47888888888877 788888888888 8888875

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.34  E-value=1.3e-07  Score=47.94  Aligned_cols=33  Identities=15%  Similarity=0.323  Sum_probs=22.4

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCD   91 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~   91 (148)
                      ++|.|..|++.|.. +.|..|+++|.+++||.|+
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A           11 KPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             cCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            36667777777765 6667777777777777665

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=2.3e-07  Score=46.49  Aligned_cols=32  Identities=19%  Similarity=0.454  Sum_probs=21.7

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTC   90 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C   90 (148)
                      ++|.|+.|++.|.. ..|..|+++|.+++||.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A           11 NPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            36666667767666 666777777777777666

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.34  E-value=2.1e-07  Score=46.08  Aligned_cols=31  Identities=23%  Similarity=0.477  Sum_probs=19.3

Q ss_pred             CccCccchhccch-HHHHhhHhhcCCCCcccC
Q 032068           60 PVACSQCSETMER-EILAIHKGENCPQRIVTC   90 (148)
Q Consensus        60 ~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C   90 (148)
                      +|.|+.|++.|.. +.|..|+++|.+++||.|
T Consensus        11 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A           11 PYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            5666666666655 566666666666666655

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.34  E-value=1.9e-07  Score=46.82  Aligned_cols=33  Identities=21%  Similarity=0.467  Sum_probs=23.6

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCD   91 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~   91 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A           11 NPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             cCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            36777777777766 7777777777777777764

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=2.2e-07  Score=46.54  Aligned_cols=33  Identities=18%  Similarity=0.331  Sum_probs=25.1

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCD   91 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~   91 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A           11 KRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             SSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            37777778777766 7777888788888887774

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.33  E-value=2.2e-07  Score=47.02  Aligned_cols=33  Identities=18%  Similarity=0.389  Sum_probs=26.7

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCD   91 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~   91 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A           11 KPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            47888888888877 7888888888888888875

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.32  E-value=1.7e-07  Score=47.47  Aligned_cols=33  Identities=15%  Similarity=0.305  Sum_probs=25.0

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCD   91 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~   91 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A           11 KPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            47777777777766 7777787777788887775

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.30  E-value=3.6e-07  Score=42.93  Aligned_cols=30  Identities=20%  Similarity=0.276  Sum_probs=24.9

Q ss_pred             CccCccchhccch-HHHHhhHhhcCCCCccc
Q 032068           60 PVACSQCSETMER-EILAIHKGENCPQRIVT   89 (148)
Q Consensus        60 ~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~   89 (148)
                      ||.|+.|++.|.. +.|..|+++|.+++||.
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            6788888888877 88888888888888774

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.29  E-value=2.6e-07  Score=46.29  Aligned_cols=33  Identities=15%  Similarity=0.293  Sum_probs=26.6

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCD   91 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~   91 (148)
                      ++|.|+.|++.|.. +.|..|+++|.+++||.|.
T Consensus        11 ~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A           11 KSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            47888888888877 8888888888888888773

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.28  E-value=4.4e-07  Score=43.86  Aligned_cols=33  Identities=18%  Similarity=0.385  Sum_probs=29.7

Q ss_pred             cCCCCcccCC--CCCCCCC-cchHHHH-HhhcCCCCc
Q 032068            4 TSDETTKICS--HCDRAIP-SSNIDLH-FAHCSRNLE   36 (148)
Q Consensus         4 h~~~~~~~C~--~C~~~~~-~~~l~~H-~~~~~~~~~   36 (148)
                      |++++||.|.  .|++.|. .++|..| +.|.++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            6789999999  6999999 9999999 699988775

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.27  E-value=5.3e-07  Score=42.92  Aligned_cols=32  Identities=22%  Similarity=0.430  Sum_probs=28.5

Q ss_pred             CccCCCCcccCCCCCCCCC-cchHHHH-HhhcCC
Q 032068            2 AMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSR   33 (148)
Q Consensus         2 ~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~   33 (148)
                      .+|++++||.|..|++.|. ...|..| +.|.++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            4789999999999999999 9999999 688765

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=5.2e-07  Score=45.64  Aligned_cols=32  Identities=22%  Similarity=0.389  Sum_probs=15.7

Q ss_pred             CccCccchhccch-HHHHhhHhhcCCCCcccCC
Q 032068           60 PVACSQCSETMER-EILAIHKGENCPQRIVTCD   91 (148)
Q Consensus        60 ~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~   91 (148)
                      +|.|+.|++.|.. +.|..|+++|.+++||.|+
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A           12 PFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             SCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4455555555544 4445555444444554443

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.27  E-value=4.8e-07  Score=43.16  Aligned_cols=32  Identities=28%  Similarity=0.406  Sum_probs=28.1

Q ss_pred             CccCCCCcccCCCCCCCCC-cchHHHH-HhhcCC
Q 032068            2 AMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSR   33 (148)
Q Consensus         2 ~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~   33 (148)
                      .+|++++||.|..|++.|. ...|..| ..|.++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            4689999999999999999 9999999 677664

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.26  E-value=4e-07  Score=43.46  Aligned_cols=32  Identities=22%  Similarity=0.373  Sum_probs=28.0

Q ss_pred             CccCCCCcccCCCCCCCCC-cchHHHH-HhhcCC
Q 032068            2 AMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSR   33 (148)
Q Consensus         2 ~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~   33 (148)
                      ++|++++||.|..|++.|. .+.|..| +.|.++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            4789999999999999999 9999999 577654

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.26  E-value=2e-07  Score=46.20  Aligned_cols=31  Identities=16%  Similarity=0.244  Sum_probs=14.3

Q ss_pred             CccCccchhccch-HHHHhhHhhcCCCCcccC
Q 032068           60 PVACSQCSETMER-EILAIHKGENCPQRIVTC   90 (148)
Q Consensus        60 ~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C   90 (148)
                      +|.|+.|++.|.. +.|..|+++|.+++||.|
T Consensus        11 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A           11 PYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             SEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            4444444444444 444444444444444443

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.24  E-value=6.6e-07  Score=43.74  Aligned_cols=31  Identities=23%  Similarity=0.389  Sum_probs=27.4

Q ss_pred             ccCCCCcccCCC--CCCCCC-cchHHHH-HhhcCC
Q 032068            3 MTSDETTKICSH--CDRAIP-SSNIDLH-FAHCSR   33 (148)
Q Consensus         3 ~h~~~~~~~C~~--C~~~~~-~~~l~~H-~~~~~~   33 (148)
                      .+++++||.|..  |++.|. .++|..| +.|.++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            578999999985  999999 9999999 688764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.24  E-value=2.9e-07  Score=44.45  Aligned_cols=25  Identities=20%  Similarity=0.379  Sum_probs=22.3

Q ss_pred             cCCCCcccCCCCCCCCC-cchHHHHH
Q 032068            4 TSDETTKICSHCDRAIP-SSNIDLHF   28 (148)
Q Consensus         4 h~~~~~~~C~~C~~~~~-~~~l~~H~   28 (148)
                      ..+++||.|..|++.|. .++|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            57899999999999999 99999996

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.24  E-value=1e-06  Score=41.87  Aligned_cols=31  Identities=19%  Similarity=0.492  Sum_probs=27.9

Q ss_pred             ccCCCCcccCCCCCCCCC-cchHHHH-HhhcCC
Q 032068            3 MTSDETTKICSHCDRAIP-SSNIDLH-FAHCSR   33 (148)
Q Consensus         3 ~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~   33 (148)
                      +|++++||.|..|++.|. ...|..| +.|.++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            688999999999999999 9999999 688765

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=98.23  E-value=4.4e-07  Score=59.29  Aligned_cols=68  Identities=18%  Similarity=0.247  Sum_probs=33.2

Q ss_pred             cchhccchHHHHhhHhhcCCCCcccCCCCCCCCChhhHHHHHH-HhcccccCC----cchhhhhhhccCcceee
Q 032068           65 QCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQV-AIVNNFENG----KTIADLSYLGVMLCCFV  133 (148)
Q Consensus        65 ~C~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~l~~H~~-~c~~~~~~~----~~~~~~~~~~~~~~~~~  133 (148)
                      +|+..+....+..|+ ..+..++..|+.|+..+.+..|..|.. .|+.+...+    ..+...+++.|.+.|.|
T Consensus        89 GC~~~~~~~~l~~H~-~~C~~~~v~C~~C~~~~~r~~l~~H~~~~C~~r~~~C~~C~~~~~~~~l~~H~~~~~~  161 (170)
T 3hcs_A           89 GCLHKMELRHLEDHQ-AHCEFALMDCPQCQRPFQKFHINIHILKDCPRRQVSCDNCAASMAFEDKEIHDQNCPL  161 (170)
T ss_dssp             TCCCEEEGGGHHHHH-TTCTTSEEECTTTCCEEEGGGHHHHHHHTCTTCEEECTTTCCEEEGGGHHHHHTTCCC
T ss_pred             CCCceecHhHHHHHH-hcCCceeeECCCCChHHHHHHHHHHhhhhCCCCCeECCCCCCccCHHHHHhHHHhCcC
Confidence            454444445555554 245555555555555555555555552 444433332    23444444555544443

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.22  E-value=4.2e-07  Score=45.98  Aligned_cols=31  Identities=16%  Similarity=0.201  Sum_probs=14.8

Q ss_pred             CccCccchhccch-HHHHhhHhhcCCCCcccC
Q 032068           60 PVACSQCSETMER-EILAIHKGENCPQRIVTC   90 (148)
Q Consensus        60 ~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C   90 (148)
                      +|.|..|++.|.. ..|..|+++|.+++||.|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A           12 PFQCKECGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             SEECSSSCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             CeeCcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            4444444444444 444444444444444444

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.19  E-value=1.4e-06  Score=40.80  Aligned_cols=30  Identities=23%  Similarity=0.337  Sum_probs=26.9

Q ss_pred             CcccCCCCCCCCC-cchHHHH-HhhcCCCCcc
Q 032068            8 TTKICSHCDRAIP-SSNIDLH-FAHCSRNLER   37 (148)
Q Consensus         8 ~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~   37 (148)
                      +||.|..|++.|. .++|..| ..|.+++++.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            5899999999999 9999999 6999988764

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.19  E-value=8.4e-07  Score=44.43  Aligned_cols=31  Identities=16%  Similarity=0.439  Sum_probs=17.3

Q ss_pred             CccCccchhccch-HHHHhhHhhcCCCCcccC
Q 032068           60 PVACSQCSETMER-EILAIHKGENCPQRIVTC   90 (148)
Q Consensus        60 ~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C   90 (148)
                      +|.|..|++.|.. +.|..|+++|.+++||.|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A           12 PYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             SEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            5555555555554 555555555555555544

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.15  E-value=1.4e-06  Score=48.12  Aligned_cols=34  Identities=15%  Similarity=0.191  Sum_probs=27.1

Q ss_pred             CCccCc--cchhccch-HHHHhhH-hhcCCCCcccCCC
Q 032068           59 APVACS--QCSETMER-EILAIHK-GENCPQRIVTCDF   92 (148)
Q Consensus        59 ~~~~C~--~C~~~~~~-~~l~~h~-~~~~~~~~~~C~~   92 (148)
                      +||.|.  .|++.|.. +.|..|+ ++|++++||.|..
T Consensus        26 KPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           26 RPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             CSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             CCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            588885  48888877 8888886 6788888888754

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.14  E-value=1.1e-06  Score=42.76  Aligned_cols=32  Identities=19%  Similarity=0.267  Sum_probs=24.4

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTC   90 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C   90 (148)
                      ++|.|..|++.|.. +.|..|+++|.+++||.+
T Consensus         5 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            5 RSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            46778888888866 778888888888887754

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.13  E-value=1.5e-06  Score=41.37  Aligned_cols=31  Identities=16%  Similarity=0.362  Sum_probs=27.5

Q ss_pred             ccCCCCcccCCCCCCCCC-cchHHHH-HhhcCC
Q 032068            3 MTSDETTKICSHCDRAIP-SSNIDLH-FAHCSR   33 (148)
Q Consensus         3 ~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~   33 (148)
                      +|++++||.|..|++.|. ...|..| +.|.++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            578899999999999999 9999999 688765

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.13  E-value=7.5e-07  Score=45.67  Aligned_cols=32  Identities=13%  Similarity=0.360  Sum_probs=26.8

Q ss_pred             ccCCCCcccCCCCCCCCC-cchHHHH-H-hhcCCC
Q 032068            3 MTSDETTKICSHCDRAIP-SSNIDLH-F-AHCSRN   34 (148)
Q Consensus         3 ~h~~~~~~~C~~C~~~~~-~~~l~~H-~-~~~~~~   34 (148)
                      +|++++||.|..|++.|. ..+|..| + .|.++.
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            589999999999999999 9999999 7 787754

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.12  E-value=7.4e-07  Score=42.91  Aligned_cols=29  Identities=14%  Similarity=0.271  Sum_probs=23.8

Q ss_pred             hhcCCCCcccCCCCCCCCC-hhhHHHH-HHH
Q 032068           80 GENCPQRIVTCDFCEFPLP-AVDLAEH-QVA  108 (148)
Q Consensus        80 ~~~~~~~~~~C~~C~~~f~-~~~l~~H-~~~  108 (148)
                      ++|.+++||.|+.|++.|. .+.|..| +++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~   32 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQK   32 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHH
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHH
Confidence            3577888999999999988 8888888 654

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.11  E-value=3.9e-07  Score=42.47  Aligned_cols=30  Identities=20%  Similarity=0.345  Sum_probs=26.5

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcc
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIV   88 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~   88 (148)
                      +||.|..|++.|.. +.|..|+++|.+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            37899999999988 8999999999999886

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.10  E-value=1e-06  Score=42.23  Aligned_cols=28  Identities=18%  Similarity=0.337  Sum_probs=20.7

Q ss_pred             hcCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           81 ENCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        81 ~~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      +|.+++||.|+.|++.|. .+.|..|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKT   31 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHH
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHH
Confidence            466777777777777777 7777777664

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.10  E-value=1.9e-06  Score=40.61  Aligned_cols=27  Identities=15%  Similarity=0.268  Sum_probs=19.0

Q ss_pred             cCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           82 NCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        82 ~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      |.+++||.|+.|++.|. .+.|..|+++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~   29 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIRE   29 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHH
Confidence            45667777777777777 7777777664

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.09  E-value=1.2e-06  Score=42.27  Aligned_cols=25  Identities=20%  Similarity=0.285  Sum_probs=20.4

Q ss_pred             cCCCCcccCCCCCCCCC-hhhHHHHH
Q 032068           82 NCPQRIVTCDFCEFPLP-AVDLAEHQ  106 (148)
Q Consensus        82 ~~~~~~~~C~~C~~~f~-~~~l~~H~  106 (148)
                      ..+++||.|+.|+++|. .+.|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            45788888888888888 88888886

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.06  E-value=2.6e-06  Score=41.56  Aligned_cols=27  Identities=19%  Similarity=0.524  Sum_probs=21.4

Q ss_pred             cCCCCcccCCC--CCCCCC-hhhHHHHHHH
Q 032068           82 NCPQRIVTCDF--CEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        82 ~~~~~~~~C~~--C~~~f~-~~~l~~H~~~  108 (148)
                      +.+++||.|+.  |++.|. .+.|..|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~   33 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKV   33 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHh
Confidence            56788888875  888888 8888888775

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.03  E-value=2e-06  Score=40.56  Aligned_cols=27  Identities=19%  Similarity=0.367  Sum_probs=17.6

Q ss_pred             cCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           82 NCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        82 ~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      |.+++||.|+.|++.|. .+.|..|+++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~   29 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKV   29 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGG
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHH
Confidence            45666677777776666 6666666553

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.02  E-value=2.6e-06  Score=40.76  Aligned_cols=29  Identities=28%  Similarity=0.589  Sum_probs=25.1

Q ss_pred             hhcCCCCcccCCCCCCCCC-h-hhHHHHHHH
Q 032068           80 GENCPQRIVTCDFCEFPLP-A-VDLAEHQVA  108 (148)
Q Consensus        80 ~~~~~~~~~~C~~C~~~f~-~-~~l~~H~~~  108 (148)
                      ++|.+++||.|+.|++.|. . +.|..|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~   32 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWA   32 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHH
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHh
Confidence            3578899999999999999 7 899999875

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.00  E-value=3.3e-06  Score=40.49  Aligned_cols=31  Identities=19%  Similarity=0.405  Sum_probs=27.5

Q ss_pred             ccCCCCcccCC--CCCCCCC-cchHHHH-HhhcCC
Q 032068            3 MTSDETTKICS--HCDRAIP-SSNIDLH-FAHCSR   33 (148)
Q Consensus         3 ~h~~~~~~~C~--~C~~~~~-~~~l~~H-~~~~~~   33 (148)
                      .|++++||.|.  .|++.|. .+.|..| +.|.++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            48899999998  5999999 9999999 688775

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.99  E-value=3.4e-06  Score=40.05  Aligned_cols=28  Identities=18%  Similarity=0.469  Sum_probs=21.5

Q ss_pred             hcCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           81 ENCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        81 ~~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      .|.+++||.|+.|++.|. .+.|..|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNR   31 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHH
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHH
Confidence            466778888888888887 7788888764

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.99  E-value=2.8e-06  Score=43.20  Aligned_cols=32  Identities=22%  Similarity=0.321  Sum_probs=26.9

Q ss_pred             CccCCCCcccCC--CCCCCCC-cchHHHH-HhhcCC
Q 032068            2 AMTSDETTKICS--HCDRAIP-SSNIDLH-FAHCSR   33 (148)
Q Consensus         2 ~~h~~~~~~~C~--~C~~~~~-~~~l~~H-~~~~~~   33 (148)
                      ..|++++||.|.  .|++.|. .++|..| +.|.++
T Consensus        11 ~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            358889999995  7999999 9999999 688765

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.99  E-value=3.9e-06  Score=39.74  Aligned_cols=28  Identities=14%  Similarity=0.340  Sum_probs=21.8

Q ss_pred             hcCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           81 ENCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        81 ~~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      +|.+++||.|+.|++.|. ...|..|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRK   31 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHH
Confidence            466778888888888888 7788888764

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.97  E-value=7.2e-06  Score=38.78  Aligned_cols=28  Identities=18%  Similarity=0.395  Sum_probs=21.7

Q ss_pred             hcCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           81 ENCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        81 ~~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      .|.+++||.|+.|++.|. ...|..|+++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLL   31 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHH
Confidence            356778888888888888 7888888765

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.96  E-value=4e-06  Score=42.85  Aligned_cols=27  Identities=19%  Similarity=0.299  Sum_probs=24.3

Q ss_pred             hcCCCCcccCCCCCCCCC-hhhHHHHHH
Q 032068           81 ENCPQRIVTCDFCEFPLP-AVDLAEHQV  107 (148)
Q Consensus        81 ~~~~~~~~~C~~C~~~f~-~~~l~~H~~  107 (148)
                      +|.+++||.|..|++.|. ...|..|++
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~   28 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYA   28 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhh
Confidence            378899999999999999 999999988

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.94  E-value=2.9e-06  Score=40.30  Aligned_cols=28  Identities=18%  Similarity=0.435  Sum_probs=20.1

Q ss_pred             hcCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           81 ENCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        81 ~~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      .|.+++||.|+.|++.|. .+.|..|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLV   31 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHH
Confidence            356677777777777777 7777777654

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=97.93  E-value=1e-05  Score=52.77  Aligned_cols=103  Identities=19%  Similarity=0.342  Sum_probs=75.5

Q ss_pred             cCCCCCCCCC-cchHHHH--HhhcCCCCcccc--ccCCccChhhHHHHHHcC-CCCccCccchhccchHHHHhhHhhcCC
Q 032068           11 ICSHCDRAIP-SSNIDLH--FAHCSRNLERCK--VCGDMVPRKYAEEHFLNT-HAPVACSQCSETMEREILAIHKGENCP   84 (148)
Q Consensus        11 ~C~~C~~~~~-~~~l~~H--~~~~~~~~~~C~--~C~~~f~~~~l~~h~~~~-h~~~~C~~C~~~~~~~~l~~h~~~~~~   84 (148)
                      .|+.|...+. ..-+...  ..........|+  .|+..+....+..|.... +.+..|+.|+..+....|..|....+.
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~~~~~i~~l~v~C~n~GC~~~~~~~~l~~H~~~C~~~~v~C~~C~~~~~r~~l~~H~~~~C~  134 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMDCPQCQRPFQKFHINIHILKDCP  134 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHHHHHHHHTSEEECCSTTCCCEEEGGGHHHHHTTCTTSEEECTTTCCEEEGGGHHHHHHHTCT
T ss_pred             CCCCCccCcchhhhhhhHHHHHHHhhcccCCCCCCCCceecHhHHHHHHhcCCceeeECCCCChHHHHHHHHHHhhhhCC
Confidence            7999988876 3211111  112223345673  688888777888887543 347789999998988899999988899


Q ss_pred             CCcccCCCCCCCCChhhHHHHHHHhcccc
Q 032068           85 QRIVTCDFCEFPLPAVDLAEHQVAIVNNF  113 (148)
Q Consensus        85 ~~~~~C~~C~~~f~~~~l~~H~~~c~~~~  113 (148)
                      .++..|+.|+..|....|+.|+.+|...+
T Consensus       135 ~r~~~C~~C~~~~~~~~l~~H~~~~~~~~  163 (170)
T 3hcs_A          135 RRQVSCDNCAASMAFEDKEIHDQNCPLAL  163 (170)
T ss_dssp             TCEEECTTTCCEEEGGGHHHHHTTCCC--
T ss_pred             CCCeECCCCCCccCHHHHHhHHHhCcChh
Confidence            99999999999999999999998875544

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.89  E-value=1e-05  Score=44.41  Aligned_cols=32  Identities=13%  Similarity=0.285  Sum_probs=28.5

Q ss_pred             ccCCCCcccCCCCCCCCC-cchHHHH-HhhcCCC
Q 032068            3 MTSDETTKICSHCDRAIP-SSNIDLH-FAHCSRN   34 (148)
Q Consensus         3 ~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~   34 (148)
                      .+.+++||.|..|++.|. .++|..| +.|.+..
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            478899999999999999 9999999 6898863

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.88  E-value=7.3e-06  Score=36.12  Aligned_cols=24  Identities=13%  Similarity=0.361  Sum_probs=20.0

Q ss_pred             CCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           85 QRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        85 ~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      ++||.|+.|++.|. .+.|..|+++
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRT   25 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHH
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHH
Confidence            46889999999988 8888888764

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.87  E-value=8.9e-06  Score=38.50  Aligned_cols=27  Identities=22%  Similarity=0.503  Sum_probs=19.8

Q ss_pred             cCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           82 NCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        82 ~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      +.+++||.|+.|++.|. ...|..|+++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRI   31 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHH
Confidence            55667777777777777 7777777764

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.79  E-value=9.9e-07  Score=41.00  Aligned_cols=29  Identities=14%  Similarity=0.146  Sum_probs=24.9

Q ss_pred             CcccCCCCCCCCC-cchHHHH-HhhcCCCCc
Q 032068            8 TTKICSHCDRAIP-SSNIDLH-FAHCSRNLE   36 (148)
Q Consensus         8 ~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~   36 (148)
                      +||.|..|++.|. .++|..| +.|.+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            5789999999999 8999999 688888765

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.79  E-value=8.4e-06  Score=36.41  Aligned_cols=26  Identities=23%  Similarity=0.464  Sum_probs=15.4

Q ss_pred             CccCccchhccch-HHHHhhHhhcCCC
Q 032068           60 PVACSQCSETMER-EILAIHKGENCPQ   85 (148)
Q Consensus        60 ~~~C~~C~~~~~~-~~l~~h~~~~~~~   85 (148)
                      ||.|+.|++.|.. +.|..|+++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            4556666666655 5666666655544

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.78  E-value=1e-05  Score=36.29  Aligned_cols=27  Identities=19%  Similarity=0.310  Sum_probs=22.1

Q ss_pred             CCcccCCCCCCCCC-cchHHHH-HhhcCC
Q 032068            7 ETTKICSHCDRAIP-SSNIDLH-FAHCSR   33 (148)
Q Consensus         7 ~~~~~C~~C~~~~~-~~~l~~H-~~~~~~   33 (148)
                      ++||.|..|++.|. ...|..| ..|.++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            46889999999999 8889999 577654

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.77  E-value=2.1e-05  Score=36.00  Aligned_cols=27  Identities=22%  Similarity=0.492  Sum_probs=23.0

Q ss_pred             CCcccCC--CCCCCCC-cchHHHH-HhhcCC
Q 032068            7 ETTKICS--HCDRAIP-SSNIDLH-FAHCSR   33 (148)
Q Consensus         7 ~~~~~C~--~C~~~~~-~~~l~~H-~~~~~~   33 (148)
                      ++||.|.  .|++.|. .+.|..| +.|.++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            4789998  8999999 9999999 678764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.77  E-value=2.2e-05  Score=34.82  Aligned_cols=26  Identities=27%  Similarity=0.615  Sum_probs=22.0

Q ss_pred             CcccCCCCCCCCC-cchHHHH-HhhcCC
Q 032068            8 TTKICSHCDRAIP-SSNIDLH-FAHCSR   33 (148)
Q Consensus         8 ~~~~C~~C~~~~~-~~~l~~H-~~~~~~   33 (148)
                      +||.|..|++.|. .+.|..| ..|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            5789999999999 9999999 677664

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.77  E-value=1.4e-05  Score=35.60  Aligned_cols=25  Identities=24%  Similarity=0.489  Sum_probs=11.6

Q ss_pred             CccCccchhccch-HHHHhhHhhcCC
Q 032068           60 PVACSQCSETMER-EILAIHKGENCP   84 (148)
Q Consensus        60 ~~~C~~C~~~~~~-~~l~~h~~~~~~   84 (148)
                      +|.|+.|++.|.. +.|..|+++|.+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcC
Confidence            3444444444444 444444444443

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.76  E-value=2.6e-05  Score=34.85  Aligned_cols=27  Identities=30%  Similarity=0.440  Sum_probs=22.8

Q ss_pred             CcccCCCCCCCCC-cchHHHH-HhhcCCC
Q 032068            8 TTKICSHCDRAIP-SSNIDLH-FAHCSRN   34 (148)
Q Consensus         8 ~~~~C~~C~~~~~-~~~l~~H-~~~~~~~   34 (148)
                      +||.|..|++.|. .+.|..| ..|.+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            4789999999999 9999999 6777654

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.75  E-value=1.4e-05  Score=35.76  Aligned_cols=26  Identities=15%  Similarity=0.248  Sum_probs=13.3

Q ss_pred             CccCccchhccch-HHHHhhHhhcCCC
Q 032068           60 PVACSQCSETMER-EILAIHKGENCPQ   85 (148)
Q Consensus        60 ~~~C~~C~~~~~~-~~l~~h~~~~~~~   85 (148)
                      +|.|..|++.|.. +.|..|+++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccC
Confidence            3455555555544 5555555554444

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.74  E-value=2.7e-05  Score=42.74  Aligned_cols=28  Identities=21%  Similarity=0.367  Sum_probs=20.2

Q ss_pred             cCCCCcccCCCCCCCCC-hhhHHHHHHHh
Q 032068           82 NCPQRIVTCDFCEFPLP-AVDLAEHQVAI  109 (148)
Q Consensus        82 ~~~~~~~~C~~C~~~f~-~~~l~~H~~~c  109 (148)
                      +.+++||.|..|++.|. .+.|..|+++.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~H   36 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQH   36 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhh
Confidence            45667777777777777 77777777763

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.73  E-value=2.4e-05  Score=34.74  Aligned_cols=26  Identities=23%  Similarity=0.566  Sum_probs=21.9

Q ss_pred             CcccCCCCCCCCC-cchHHHH-HhhcCC
Q 032068            8 TTKICSHCDRAIP-SSNIDLH-FAHCSR   33 (148)
Q Consensus         8 ~~~~C~~C~~~~~-~~~l~~H-~~~~~~   33 (148)
                      +||.|..|++.|. ...|..| ..|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            4789999999999 8999999 677664

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.73  E-value=1.8e-05  Score=36.01  Aligned_cols=26  Identities=27%  Similarity=0.612  Sum_probs=15.5

Q ss_pred             CccCc--cchhccch-HHHHhhHhhcCCC
Q 032068           60 PVACS--QCSETMER-EILAIHKGENCPQ   85 (148)
Q Consensus        60 ~~~C~--~C~~~~~~-~~l~~h~~~~~~~   85 (148)
                      ||.|+  .|++.|.. +.|..|+++|.++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            45565  66666655 6666666666554

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.72  E-value=3.1e-06  Score=49.27  Aligned_cols=36  Identities=14%  Similarity=0.220  Sum_probs=24.1

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFCE   94 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C~   94 (148)
                      ++|.|+.|++.|.. ..|..|+++|.+++||.|..|.
T Consensus        24 kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~   60 (88)
T 1x6f_A           24 STYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE   60 (88)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS
T ss_pred             CCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh
Confidence            36667777777765 6677777777777777765544

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.72  E-value=1.5e-05  Score=35.51  Aligned_cols=26  Identities=23%  Similarity=0.539  Sum_probs=21.8

Q ss_pred             CcccCCCCCCCCC-cchHHHH-HhhcCC
Q 032068            8 TTKICSHCDRAIP-SSNIDLH-FAHCSR   33 (148)
Q Consensus         8 ~~~~C~~C~~~~~-~~~l~~H-~~~~~~   33 (148)
                      +||.|..|++.|. .+.|..| ..|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            5789999999999 8999999 577664

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.71  E-value=6.4e-06  Score=36.42  Aligned_cols=23  Identities=17%  Similarity=0.395  Sum_probs=18.0

Q ss_pred             CCcccCCCCCCCCC-hhhHHHHHH
Q 032068           85 QRIVTCDFCEFPLP-AVDLAEHQV  107 (148)
Q Consensus        85 ~~~~~C~~C~~~f~-~~~l~~H~~  107 (148)
                      ++||.|+.|++.|. .+.|..|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~   24 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMR   24 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHT
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHH
Confidence            46788888888888 788888865

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.70  E-value=1.8e-05  Score=34.61  Aligned_cols=24  Identities=17%  Similarity=0.372  Sum_probs=13.1

Q ss_pred             ccCccchhccch-HHHHhhHhhcCC
Q 032068           61 VACSQCSETMER-EILAIHKGENCP   84 (148)
Q Consensus        61 ~~C~~C~~~~~~-~~l~~h~~~~~~   84 (148)
                      |.|..|++.|.. +.|..|+++|.+
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            455555555554 555555555443

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.69  E-value=1.8e-05  Score=35.43  Aligned_cols=25  Identities=16%  Similarity=0.347  Sum_probs=12.4

Q ss_pred             CccCccchhccch-HHHHhhHhhcCC
Q 032068           60 PVACSQCSETMER-EILAIHKGENCP   84 (148)
Q Consensus        60 ~~~C~~C~~~~~~-~~l~~h~~~~~~   84 (148)
                      +|.|..|++.|.. ..|..|+++|.+
T Consensus         3 ~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            3 PYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             CccCCCCCcccCCHHHHHHHHHHhcc
Confidence            4455555555544 455555554444

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.85  E-value=5.9e-06  Score=37.04  Aligned_cols=26  Identities=19%  Similarity=0.516  Sum_probs=15.2

Q ss_pred             CccCccchhccch-HHHHhhHhhcCCC
Q 032068           60 PVACSQCSETMER-EILAIHKGENCPQ   85 (148)
Q Consensus        60 ~~~C~~C~~~~~~-~~l~~h~~~~~~~   85 (148)
                      ||.|..|++.|.. +.|..|+++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            4556666666655 5666666555543

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.67  E-value=2.8e-05  Score=37.19  Aligned_cols=26  Identities=19%  Similarity=0.282  Sum_probs=13.6

Q ss_pred             CCCCcccCC--CCCCCCC-hhhHHHHHHH
Q 032068           83 CPQRIVTCD--FCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        83 ~~~~~~~C~--~C~~~f~-~~~l~~H~~~  108 (148)
                      .+++||.|+  .|++.|. .+.|..|+++
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~   30 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHK   30 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHH
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHH
Confidence            345555555  3555555 5555555543

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.65  E-value=1.6e-05  Score=35.21  Aligned_cols=24  Identities=17%  Similarity=0.364  Sum_probs=19.1

Q ss_pred             CCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           85 QRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        85 ~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      ++||.|+.|++.|. .+.|..|+++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~   25 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRV   25 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTT
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHh
Confidence            46788888888888 8888888753

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.65  E-value=3.2e-05  Score=35.35  Aligned_cols=26  Identities=27%  Similarity=0.543  Sum_probs=14.3

Q ss_pred             CccCc--cchhccch-HHHHhhHhhcCCC
Q 032068           60 PVACS--QCSETMER-EILAIHKGENCPQ   85 (148)
Q Consensus        60 ~~~C~--~C~~~~~~-~~l~~h~~~~~~~   85 (148)
                      +|.|.  .|++.|.. +.|..|+++|.++
T Consensus         3 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            3 PYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            45555  55555555 5555555555544

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.65  E-value=3.2e-05  Score=36.85  Aligned_cols=27  Identities=15%  Similarity=0.191  Sum_probs=20.9

Q ss_pred             cCCCCcccCCC--CCCCCC-hhhHHHHHHH
Q 032068           82 NCPQRIVTCDF--CEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        82 ~~~~~~~~C~~--C~~~f~-~~~l~~H~~~  108 (148)
                      +.+++||.|+.  |++.|. .+.|..|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~   32 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRW   32 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHh
Confidence            56778888874  888888 8888888765

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.64  E-value=1.7e-05  Score=34.81  Aligned_cols=24  Identities=29%  Similarity=0.396  Sum_probs=18.8

Q ss_pred             CCcccCCCCCCCCC-cchHHHH-Hhh
Q 032068            7 ETTKICSHCDRAIP-SSNIDLH-FAH   30 (148)
Q Consensus         7 ~~~~~C~~C~~~~~-~~~l~~H-~~~   30 (148)
                      ++||.|..|++.|. .+.|..| +.|
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHc
Confidence            46888888888888 8888888 454

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.64  E-value=1.3e-05  Score=35.67  Aligned_cols=24  Identities=17%  Similarity=0.367  Sum_probs=10.9

Q ss_pred             ccCccchhccch-HHHHhhHhhcCC
Q 032068           61 VACSQCSETMER-EILAIHKGENCP   84 (148)
Q Consensus        61 ~~C~~C~~~~~~-~~l~~h~~~~~~   84 (148)
                      |.|+.|++.|.. ..|..|+++|.+
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            3 LKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             EECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             ccCCCCCCccCChhHHHHHHHHhcC
Confidence            444444444443 444444444433

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.63  E-value=2.3e-05  Score=34.75  Aligned_cols=26  Identities=23%  Similarity=0.489  Sum_probs=21.9

Q ss_pred             CcccCCCCCCCCC-cchHHHH-HhhcCC
Q 032068            8 TTKICSHCDRAIP-SSNIDLH-FAHCSR   33 (148)
Q Consensus         8 ~~~~C~~C~~~~~-~~~l~~H-~~~~~~   33 (148)
                      +||.|..|++.|. ...|..| +.|.++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            4789999999999 8899999 677764

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.63  E-value=2.8e-05  Score=34.89  Aligned_cols=26  Identities=23%  Similarity=0.538  Sum_probs=14.8

Q ss_pred             CccCccchhccch-HHHHhh-HhhcCCC
Q 032068           60 PVACSQCSETMER-EILAIH-KGENCPQ   85 (148)
Q Consensus        60 ~~~C~~C~~~~~~-~~l~~h-~~~~~~~   85 (148)
                      +|.|+.|++.|.. +.|..| +++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            4556666666655 566666 4555544

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.62  E-value=8.5e-06  Score=41.33  Aligned_cols=31  Identities=13%  Similarity=0.270  Sum_probs=25.5

Q ss_pred             hHhhcCCCCcccCC--CCCCCCC-hhhHHHHHHH
Q 032068           78 HKGENCPQRIVTCD--FCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        78 h~~~~~~~~~~~C~--~C~~~f~-~~~l~~H~~~  108 (148)
                      |...|.+++||.|+  .|++.|. .+.|..|+++
T Consensus         9 ~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~   42 (47)
T 1ncs_A            9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQT   42 (47)
T ss_dssp             GSCEEETTTEEECCCTTCCCEECSSSSHHHHHHH
T ss_pred             HHhccCCCCCeECCCCCCCCccCCHHHHHHHHHH
Confidence            34468889999995  6999999 8899999876

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.62  E-value=5e-05  Score=33.56  Aligned_cols=23  Identities=17%  Similarity=0.359  Sum_probs=19.9

Q ss_pred             CcccCCCCCCCCC-hhhHHHHHHH
Q 032068           86 RIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        86 ~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      +||.|+.|++.|. .+.|..|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~   24 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKI   24 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHH
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHH
Confidence            5789999999999 8899999875

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.61  E-value=1.6e-05  Score=35.16  Aligned_cols=25  Identities=20%  Similarity=0.450  Sum_probs=18.7

Q ss_pred             CCcccCCCCCCCCC-cchHHHH-Hhhc
Q 032068            7 ETTKICSHCDRAIP-SSNIDLH-FAHC   31 (148)
Q Consensus         7 ~~~~~C~~C~~~~~-~~~l~~H-~~~~   31 (148)
                      ++||.|..|++.|. .+.|..| +.|.
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcC
Confidence            46788888888888 7888888 4543

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.76  E-value=8.7e-06  Score=36.63  Aligned_cols=27  Identities=22%  Similarity=0.537  Sum_probs=21.8

Q ss_pred             CCcccCCCCCCCCC-cchHHHH-HhhcCC
Q 032068            7 ETTKICSHCDRAIP-SSNIDLH-FAHCSR   33 (148)
Q Consensus         7 ~~~~~C~~C~~~~~-~~~l~~H-~~~~~~   33 (148)
                      ++||.|..|++.|. .+.|..| ..|.++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            46889999999999 8889888 566653

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.60  E-value=3.4e-05  Score=35.04  Aligned_cols=26  Identities=19%  Similarity=0.507  Sum_probs=21.4

Q ss_pred             CcccCC--CCCCCCC-cchHHHH-HhhcCC
Q 032068            8 TTKICS--HCDRAIP-SSNIDLH-FAHCSR   33 (148)
Q Consensus         8 ~~~~C~--~C~~~~~-~~~l~~H-~~~~~~   33 (148)
                      +||.|.  .|++.|. .++|..| +.|.++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            578897  8999999 8899999 577764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.73  E-value=9.9e-06  Score=36.24  Aligned_cols=26  Identities=23%  Similarity=0.429  Sum_probs=21.1

Q ss_pred             CcccCCCCCCCCC-cchHHHH-HhhcCC
Q 032068            8 TTKICSHCDRAIP-SSNIDLH-FAHCSR   33 (148)
Q Consensus         8 ~~~~C~~C~~~~~-~~~l~~H-~~~~~~   33 (148)
                      +||.|..|++.|. .++|..| +.|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            4788999999999 8889888 577654

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.73  E-value=1e-05  Score=35.29  Aligned_cols=23  Identities=22%  Similarity=0.382  Sum_probs=17.1

Q ss_pred             CcccCCCCCCCCC-hhhHHHHHHH
Q 032068           86 RIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        86 ~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      +||.|+.|++.|. .+.|..|+++
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~   24 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRH   24 (26)
Confidence            4677888888887 7777777653

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=97.56  E-value=2e-05  Score=44.41  Aligned_cols=55  Identities=22%  Similarity=0.575  Sum_probs=34.3

Q ss_pred             CccC-ccchhccchHHHHhhHhhcCCCCcccCCCCCCCCChhhHHHHHHHhccccc
Q 032068           60 PVAC-SQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQVAIVNNFE  114 (148)
Q Consensus        60 ~~~C-~~C~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~l~~H~~~c~~~~~  114 (148)
                      +..| ..|+..+....|..|....+..++..|++|+..|.+..|..|...|+....
T Consensus        16 ~v~C~~~C~~~v~r~~l~~H~~~~C~~r~v~C~~C~~~~~~~~l~~H~~~Cp~~~v   71 (76)
T 2yuc_A           16 VIPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEFCGCDFSGEAYESHEGMCPQESS   71 (76)
T ss_dssp             CCBCTTCCSCBCCSSSSTTTTTTSCTTSCCCCSSSCCCCCHHHHHHTTTSCTTSSC
T ss_pred             ccCCCccccHHhhHhHHHhhCHhhCCCcceECCCCCCccCHHHHHHHHhHCCCCcc
Confidence            4555 356665655566666654566666677777766666666777666665443

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.52  E-value=1.4e-05  Score=35.29  Aligned_cols=21  Identities=19%  Similarity=0.507  Sum_probs=16.4

Q ss_pred             CCcccCCCCCCCCC-cchHHHH
Q 032068            7 ETTKICSHCDRAIP-SSNIDLH   27 (148)
Q Consensus         7 ~~~~~C~~C~~~~~-~~~l~~H   27 (148)
                      ++||.|..|++.|. .+.|..|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H   22 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAH   22 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHH
T ss_pred             CcCcCCCCCCcccCCHHHHHHH
Confidence            46788888888888 7778777

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.61  E-value=1.6e-05  Score=35.66  Aligned_cols=25  Identities=20%  Similarity=0.406  Sum_probs=12.8

Q ss_pred             CccCccchhccch-HHHHhhHhhcCC
Q 032068           60 PVACSQCSETMER-EILAIHKGENCP   84 (148)
Q Consensus        60 ~~~C~~C~~~~~~-~~l~~h~~~~~~   84 (148)
                      +|.|..|++.|.. +.|..|+++|.+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            4455555555544 555555554443

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.39  E-value=8.6e-05  Score=32.28  Aligned_cols=24  Identities=25%  Similarity=0.439  Sum_probs=18.1

Q ss_pred             cccCCCCCCCCC-cchHHHH-HhhcC
Q 032068            9 TKICSHCDRAIP-SSNIDLH-FAHCS   32 (148)
Q Consensus         9 ~~~C~~C~~~~~-~~~l~~H-~~~~~   32 (148)
                      ||.|..|++.|. ...|..| +.|.+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            578888888888 8888888 56654

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.46  E-value=2.9e-05  Score=33.71  Aligned_cols=23  Identities=26%  Similarity=0.566  Sum_probs=17.4

Q ss_pred             CcccCCCCCCCCC-cchHHHH-Hhh
Q 032068            8 TTKICSHCDRAIP-SSNIDLH-FAH   30 (148)
Q Consensus         8 ~~~~C~~C~~~~~-~~~l~~H-~~~   30 (148)
                      +||.|..|++.|. .+.|..| +.|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            4788888888888 7888877 444

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.34  E-value=0.00012  Score=32.67  Aligned_cols=26  Identities=23%  Similarity=0.427  Sum_probs=19.5

Q ss_pred             CcccCCCCCCCCC-cchHHHH-H-hhcCC
Q 032068            8 TTKICSHCDRAIP-SSNIDLH-F-AHCSR   33 (148)
Q Consensus         8 ~~~~C~~C~~~~~-~~~l~~H-~-~~~~~   33 (148)
                      +||.|..|++.|. .+.|..| + .|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            4788888888888 8888888 5 55543

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=97.26  E-value=3.6e-05  Score=43.32  Aligned_cols=67  Identities=24%  Similarity=0.446  Sum_probs=38.4

Q ss_pred             HHHHHhhcCCCCcccc-ccCCccChhhHHHHHH-cC-CCCccCccchhccchHHHHhhHhhcCCCCcccCC
Q 032068           24 IDLHFAHCSRNLERCK-VCGDMVPRKYAEEHFL-NT-HAPVACSQCSETMEREILAIHKGENCPQRIVTCD   91 (148)
Q Consensus        24 l~~H~~~~~~~~~~C~-~C~~~f~~~~l~~h~~-~~-h~~~~C~~C~~~~~~~~l~~h~~~~~~~~~~~C~   91 (148)
                      |..|...+...+..|+ .|+..+...++..|.. .. .+...|..|+..+....|..|.. .++..+..|+
T Consensus         5 l~~H~~~C~~~~v~C~~~C~~~v~r~~l~~H~~~~C~~r~v~C~~C~~~~~~~~l~~H~~-~Cp~~~v~C~   74 (76)
T 2yuc_A            5 SSGHLNTCSFNVIPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEFCGCDFSGEAYESHEG-MCPQESSGPS   74 (76)
T ss_dssp             CSCCCCCCCCSCCBCTTCCSCBCCSSSSTTTTTTSCTTSCCCCSSSCCCCCHHHHHHTTT-SCTTSSCCCS
T ss_pred             HHHHHHHCCCcccCCCccccHHhhHhHHHhhCHhhCCCcceECCCCCCccCHHHHHHHHh-HCCCCccCCC
Confidence            3344445555666663 5666666666666643 22 23556666776666666666663 4565665554

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.12  E-value=0.00016  Score=31.86  Aligned_cols=22  Identities=23%  Similarity=0.504  Sum_probs=10.4

Q ss_pred             ccCc--cchhccch-HHHHhhHhhc
Q 032068           61 VACS--QCSETMER-EILAIHKGEN   82 (148)
Q Consensus        61 ~~C~--~C~~~~~~-~~l~~h~~~~   82 (148)
                      |.|.  .|++.|.. +.|..|+++|
T Consensus         3 ~~C~~~~C~k~f~~~~~l~~H~~~H   27 (29)
T 2ab3_A            3 YVCHFENCGRSFNDRRKLNRHKKIH   27 (29)
T ss_dssp             EEECSTTTCEEESSHHHHHHHHGGG
T ss_pred             CCCcCCcCcCccCCHHHHHHHHHHh
Confidence            4444  45555544 4444444443

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=96.92  E-value=0.00023  Score=31.33  Aligned_cols=24  Identities=21%  Similarity=0.570  Sum_probs=18.4

Q ss_pred             CcccCC--CCCCCCC-cchHHHH-Hhhc
Q 032068            8 TTKICS--HCDRAIP-SSNIDLH-FAHC   31 (148)
Q Consensus         8 ~~~~C~--~C~~~~~-~~~l~~H-~~~~   31 (148)
                      +||.|.  .|++.|. .+.|..| +.|.
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            467888  8888888 8888888 4554

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.90  E-value=0.0014  Score=35.48  Aligned_cols=45  Identities=22%  Similarity=0.397  Sum_probs=35.2

Q ss_pred             ccchhccch-HHHHhhH-hhcCCCC------cccCC--CCCCCCC-hhhHHHHHHH
Q 032068           64 SQCSETMER-EILAIHK-GENCPQR------IVTCD--FCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        64 ~~C~~~~~~-~~l~~h~-~~~~~~~------~~~C~--~C~~~f~-~~~l~~H~~~  108 (148)
                      ..|++.|.. ..|..|+ ..|.+.+      +|.|.  .|++.+. +..|..|+++
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            458888877 8888887 4676655      78997  5998888 8899999874

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.58  E-value=0.0026  Score=31.85  Aligned_cols=30  Identities=17%  Similarity=0.166  Sum_probs=22.9

Q ss_pred             CcccCCCCCCCCC-hhhHHHHHHH-hcccccC
Q 032068           86 RIVTCDFCEFPLP-AVDLAEHQVA-IVNNFEN  115 (148)
Q Consensus        86 ~~~~C~~C~~~f~-~~~l~~H~~~-c~~~~~~  115 (148)
                      -+|.|+.|+..|+ ...|+.|++. ||+....
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~~v~~   42 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCPEMVEY   42 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCTTTCCC
T ss_pred             CceeCCcccccccchHHHHhhhhhcCcchhhh
Confidence            5678888888888 8888888875 6665544

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.77  E-value=0.0014  Score=40.21  Aligned_cols=29  Identities=14%  Similarity=0.130  Sum_probs=25.6

Q ss_pred             hhcCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           80 GENCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        80 ~~~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      ..++|++||.|..|++.|. .+.|..|++.
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            4578899999999999999 9999999764

>2yre_A F-box only protein 30; zinc binding, E3 ubiquitin ligase, SCF, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.07  E-value=0.017  Score=33.94  Aligned_cols=56  Identities=21%  Similarity=0.390  Sum_probs=41.7

Q ss_pred             CccCc-cchhccchHHHHhhHhhcCCCCcccCCC----CCCCCChhhHHHHHHHhcccccCC
Q 032068           60 PVACS-QCSETMEREILAIHKGENCPQRIVTCDF----CEFPLPAVDLAEHQVAIVNNFENG  116 (148)
Q Consensus        60 ~~~C~-~C~~~~~~~~l~~h~~~~~~~~~~~C~~----C~~~f~~~~l~~H~~~c~~~~~~~  116 (148)
                      +..|+ .|+..|....|..|+.. +.+....|..    |.....+..|..|++.|+-+....
T Consensus        37 ~i~CP~~Cga~i~rckL~EH~~~-CP~a~v~C~~~~yGCp~~~~R~~L~~He~~CPas~v~~   97 (100)
T 2yre_A           37 LIGCPLVCGAVFHSCKADEHRLL-CPFERVPCLNSDFGCPFTMARNKVAEHLEMCPASVSGP   97 (100)
T ss_dssp             EEECTTCCSCEEEHHHHHHHHHH-CSSSEEECTTTTTTCCCEEESSTHHHHHHTCGGGCCCC
T ss_pred             eeeCCcccCCeeehhhHHHHHhh-cccccccccccCcCCceeecHHHHHHHHhhCCceeEec
Confidence            66787 78887777888888865 7776677765    666666889999999887655443

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.89  E-value=0.0047  Score=37.91  Aligned_cols=25  Identities=24%  Similarity=0.367  Sum_probs=20.0

Q ss_pred             ccCCCCcccCCCCCCCCC-cchHHHH
Q 032068            3 MTSDETTKICSHCDRAIP-SSNIDLH   27 (148)
Q Consensus         3 ~h~~~~~~~C~~C~~~~~-~~~l~~H   27 (148)
                      .|+|++||.|..|++.|. .+.|..|
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H   69 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTH   69 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHH
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHH
Confidence            467788888888888888 8888877

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=94.64  E-value=0.005  Score=34.43  Aligned_cols=45  Identities=18%  Similarity=0.440  Sum_probs=25.1

Q ss_pred             cccCCCCCCCCCcchHHHHHhhcCC-CCccccccCCccChhhHHHH
Q 032068            9 TKICSHCDRAIPSSNIDLHFAHCSR-NLERCKVCGDMVPRKYAEEH   53 (148)
Q Consensus         9 ~~~C~~C~~~~~~~~l~~H~~~~~~-~~~~C~~C~~~f~~~~l~~h   53 (148)
                      .|.|..|+.++.+..+..|...+.. ..+.|..|+..|...+...|
T Consensus        10 ~F~C~~Cgd~lKK~kv~~H~~~Cr~~~~~SCIDC~~~F~~~~y~~H   55 (79)
T 1wjv_A           10 FFTCNACGESVKKIQVEKHVSNCRNCECLSCIDCGKDFWGDDYKSH   55 (79)
T ss_dssp             EEEESSSCCEEETTHHHHHHHHCTTCCEEEETTTTEEEEGGGTTTC
T ss_pred             EEEcCCCCCeeecccchhHHhhCCCCCcEEecccCCeeCCCCEeCE
Confidence            3566666666666666666434433 34566666666654443333

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.72  E-value=0.039  Score=27.58  Aligned_cols=27  Identities=26%  Similarity=0.538  Sum_probs=20.4

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQ   85 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~   85 (148)
                      .++.|+.|+..|.. ..|+.|+.-.+++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~   38 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCPE   38 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCTT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCcc
Confidence            36788888888877 8888888754444

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=93.64  E-value=0.076  Score=28.44  Aligned_cols=23  Identities=17%  Similarity=0.433  Sum_probs=16.4

Q ss_pred             CCCCCCCCC-cchHHHH-H-hhcCCC
Q 032068           12 CSHCDRAIP-SSNIDLH-F-AHCSRN   34 (148)
Q Consensus        12 C~~C~~~~~-~~~l~~H-~-~~~~~~   34 (148)
                      +..|++.|. ...|..| . .|.+.+
T Consensus         6 W~~C~~~f~~~~~l~~Hv~~~Hv~~~   31 (64)
T 1zw8_A            6 WKECPESASSLFDLQRHLLKDHVSQD   31 (64)
T ss_dssp             CTTCCCCCSSHHHHHHHHHHHSCCCC
T ss_pred             eCCCCCcCCCHHHHHHHHHhhccCcc
Confidence            356888888 8888888 4 566554

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=93.50  E-value=0.0067  Score=33.92  Aligned_cols=46  Identities=22%  Similarity=0.454  Sum_probs=29.3

Q ss_pred             CCccccccCCccChhhHHHHHHcCCC--CccCccchhccchHHHHhhH
Q 032068           34 NLERCKVCGDMVPRKYAEEHFLNTHA--PVACSQCSETMEREILAIHK   79 (148)
Q Consensus        34 ~~~~C~~C~~~f~~~~l~~h~~~~h~--~~~C~~C~~~~~~~~l~~h~   79 (148)
                      ..|.|..|+..+..+.+..|...+..  .+.|..|++.|....++.|.
T Consensus         9 V~F~C~~Cgd~lKK~kv~~H~~~Cr~~~~~SCIDC~~~F~~~~y~~Ht   56 (79)
T 1wjv_A            9 VFFTCNACGESVKKIQVEKHVSNCRNCECLSCIDCGKDFWGDDYKSHV   56 (79)
T ss_dssp             CEEEESSSCCEEETTHHHHHHHHCTTCCEEEETTTTEEEEGGGTTTCC
T ss_pred             eEEEcCCCCCeeecccchhHHhhCCCCCcEEecccCCeeCCCCEeCEe
Confidence            34667777777766666667655432  46777777777665555554

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=91.93  E-value=0.098  Score=32.14  Aligned_cols=72  Identities=17%  Similarity=0.317  Sum_probs=40.3

Q ss_pred             CCCccccccCCccChh-hHHHHHHc-CCC----CccCcc------chhccchHHHHhhHhhcCCCCcccCCCCCCCCC-h
Q 032068           33 RNLERCKVCGDMVPRK-YAEEHFLN-THA----PVACSQ------CSETMEREILAIHKGENCPQRIVTCDFCEFPLP-A   99 (148)
Q Consensus        33 ~~~~~C~~C~~~f~~~-~l~~h~~~-~h~----~~~C~~------C~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~-~   99 (148)
                      .+++.|..|...|... .+..|... .|.    .+.+..      -++.+...   .+.....+...+.|..|+..|. .
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~C~~C~~~f~s~  106 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAA---PAEISDGEDRSKCCPVCNMTFSSP  106 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCC---SSCCSSCCCTTTEETTTTEECSSH
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCC---ccccccCCCCCeEcCCCCCEeCCH
Confidence            4567899999888766 34444421 121    111100      01111110   0112344567789999999999 8


Q ss_pred             hhHHHHHH
Q 032068          100 VDLAEHQV  107 (148)
Q Consensus       100 ~~l~~H~~  107 (148)
                      ..+..|..
T Consensus       107 ~~~~~H~~  114 (127)
T 1zu1_A          107 VVAESHYI  114 (127)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHC
Confidence            89999864

>2yre_A F-box only protein 30; zinc binding, E3 ubiquitin ligase, SCF, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=91.66  E-value=0.02  Score=33.65  Aligned_cols=47  Identities=15%  Similarity=0.185  Sum_probs=35.4

Q ss_pred             cccCC-CCCCCCChhhHHHHHHHhcccccCCc--------chhhhhhhccCcceee
Q 032068           87 IVTCD-FCEFPLPAVDLAEHQVAIVNNFENGK--------TIADLSYLGVMLCCFV  133 (148)
Q Consensus        87 ~~~C~-~C~~~f~~~~l~~H~~~c~~~~~~~~--------~~~~~~~~~~~~~~~~  133 (148)
                      +..|+ .|+..|.+..|.+|+.+|+++...+.        .+.|..+..|+..|+.
T Consensus        37 ~i~CP~~Cga~i~rckL~EH~~~CP~a~v~C~~~~yGCp~~~~R~~L~~He~~CPa   92 (100)
T 2yre_A           37 LIGCPLVCGAVFHSCKADEHRLLCPFERVPCLNSDFGCPFTMARNKVAEHLEMCPA   92 (100)
T ss_dssp             EEECTTCCSCEEEHHHHHHHHHHCSSSEEECTTTTTTCCCEEESSTHHHHHHTCGG
T ss_pred             eeeCCcccCCeeehhhHHHHHhhcccccccccccCcCCceeecHHHHHHHHhhCCc
Confidence            67898 69987779999999999888775544        3556666777766654

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=89.25  E-value=0.27  Score=23.01  Aligned_cols=29  Identities=24%  Similarity=0.363  Sum_probs=21.8

Q ss_pred             CCcccCCCCCCCCC-cchHHHH-HhhcCCCC
Q 032068            7 ETTKICSHCDRAIP-SSNIDLH-FAHCSRNL   35 (148)
Q Consensus         7 ~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~   35 (148)
                      ...+.|..|+-.|. ..++..| ..++..+|
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk~YC~s~p   36 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQFYCKNKP   36 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHHHTSCCCC
T ss_pred             cCcCeeccccceehhhHHHhhhheecCCCCC
Confidence            45678888888888 8888888 56766543

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=84.68  E-value=0.11  Score=25.80  Aligned_cols=13  Identities=31%  Similarity=0.728  Sum_probs=7.3

Q ss_pred             ccCccchhccchH
Q 032068           61 VACSQCSETMERE   73 (148)
Q Consensus        61 ~~C~~C~~~~~~~   73 (148)
                      |.|-.||+.|..+
T Consensus         4 Y~C~rCg~~fs~~   16 (48)
T 4ayb_P            4 YRCGKCWKTFTDE   16 (48)
T ss_dssp             -CCCCTTTTCCCC
T ss_pred             EEeeccCCCccHH
Confidence            5566666666553

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=84.08  E-value=0.8  Score=23.50  Aligned_cols=19  Identities=16%  Similarity=0.578  Sum_probs=17.0

Q ss_pred             ccCCCCCCCCC-hhhHHHHH
Q 032068           88 VTCDFCEFPLP-AVDLAEHQ  106 (148)
Q Consensus        88 ~~C~~C~~~f~-~~~l~~H~  106 (148)
                      -.|..|+..|. +..+++|+
T Consensus        14 ~eC~lC~vkYs~r~slqDHI   33 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHI   33 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHH
T ss_pred             ccccccCcccccccchhhhh
Confidence            58999999999 99999986

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=81.94  E-value=1.1  Score=26.46  Aligned_cols=28  Identities=21%  Similarity=0.688  Sum_probs=18.0

Q ss_pred             CCccccccCCccChhhHHHHHHcCCCCccCccchhc
Q 032068           34 NLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSET   69 (148)
Q Consensus        34 ~~~~C~~C~~~f~~~~l~~h~~~~h~~~~C~~C~~~   69 (148)
                      .++.|..||..|.        ....+|..|+.|+..
T Consensus        66 ~p~~C~~CG~~F~--------~~~~kPsrCP~CkSe   93 (105)
T 2gmg_A           66 KPAQCRKCGFVFK--------AEINIPSRCPKCKSE   93 (105)
T ss_dssp             CCCBBTTTCCBCC--------CCSSCCSSCSSSCCC
T ss_pred             ECcChhhCcCeec--------ccCCCCCCCcCCCCC
Confidence            4678888888871        122257778888643

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=81.29  E-value=0.84  Score=21.12  Aligned_cols=24  Identities=21%  Similarity=0.431  Sum_probs=18.0

Q ss_pred             cccCCCCCCCCC-cchHHHH-H-hhcC
Q 032068            9 TKICSHCDRAIP-SSNIDLH-F-AHCS   32 (148)
Q Consensus         9 ~~~C~~C~~~~~-~~~l~~H-~-~~~~   32 (148)
                      -|.|+.|.+.+. ...|..| . .|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            378888888888 8888888 5 5543

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=81.16  E-value=0.91  Score=20.00  Aligned_cols=22  Identities=23%  Similarity=0.517  Sum_probs=13.8

Q ss_pred             ccCCCCCCCCC-hhhHHHHHHHh
Q 032068           88 VTCDFCEFPLP-AVDLAEHQVAI  109 (148)
Q Consensus        88 ~~C~~C~~~f~-~~~l~~H~~~c  109 (148)
                      +.|+.|....+ ...++.|...|
T Consensus         4 ~~CpvCk~q~Pd~kt~~~H~e~~   26 (28)
T 2jvx_A            4 FCCPKCQYQAPDMDTLQIHVMEC   26 (28)
T ss_dssp             EECTTSSCEESSHHHHHHHHHHC
T ss_pred             ccCccccccCcChHHHHHHHHHH
Confidence            46666766666 66666665544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	148
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.46
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.35
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.07
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.07
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.05
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.04
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.0
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.99
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.97
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.95
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.94
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.92
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.86
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.85
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.82
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.8
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.73
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.72
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.7
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.66
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.64
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.64
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.6
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.6
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.46
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.41
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.34
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.33
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.33
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.3
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.21
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.2
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.14
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.08
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.06
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.03
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.01
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.87
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.87
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.85
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.79
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.78
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.73
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.54
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.52
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.41
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.31
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.2
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.19
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.14
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.08
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.05
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.01
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.98
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.93
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.9
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.83
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.77
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.76
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.72
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.7
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.52
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.5
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.46
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.17
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.01
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.99
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.85
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.78
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	95.77
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.73
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.66
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.63
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.61
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.51
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.41
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	95.29
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.26
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	95.18
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	94.86
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.38
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	94.21
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.21
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	92.85
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	92.81
d1y0jb1	36	U-shaped transcription factor, different fingers {	91.32
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	90.64
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	90.2
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	88.35
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	87.88
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	87.08
d1wjpa2	26	Zinc finger protein 295, ZNF295 {Human (Homo sapie	86.85
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	85.16
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	84.56
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	82.21
d1k2fa_	190	SIAH, seven in absentia homolog {Mouse (Mus muscul	81.08
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	80.74
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	80.18

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=8.2e-15  Score=76.84  Aligned_cols=49  Identities=18%  Similarity=0.300  Sum_probs=45.7

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      +||.| .||+.|.. ..|..|+++|++++||.|+.|+++|. .+.|..|+++
T Consensus         2 K~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~   52 (53)
T d2csha1           2 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI   52 (53)
T ss_dssp             CCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTT
T ss_pred             cCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhc
Confidence            58999 59999988 99999999999999999999999999 9999999864

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=3.1e-13  Score=70.65  Aligned_cols=47  Identities=26%  Similarity=0.441  Sum_probs=42.6

Q ss_pred             CCcccCCCCCCCCC-cchHHHH-HhhcCCCCccccccCCccChh-hHHHHH
Q 032068            7 ETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRK-YAEEHF   54 (148)
Q Consensus         7 ~~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~~C~~C~~~f~~~-~l~~h~   54 (148)
                      ||||.| +|++.|. ..+|..| ++|.+++||.|+.|++.|... .|..|+
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~   50 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM   50 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHH
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHH
Confidence            689999 5999999 9999999 799999999999999999988 667775

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=3e-11  Score=55.99  Aligned_cols=31  Identities=29%  Similarity=0.429  Sum_probs=28.9

Q ss_pred             ccCCCCcccCCCCCCCCC-cchHHHH-HhhcCC
Q 032068            3 MTSDETTKICSHCDRAIP-SSNIDLH-FAHCSR   33 (148)
Q Consensus         3 ~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~   33 (148)
                      +|+|+|||.|..|++.|. .++|..| +.|.++
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            699999999999999999 9999999 699875

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=3.7e-11  Score=57.85  Aligned_cols=33  Identities=18%  Similarity=0.389  Sum_probs=30.3

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcCC
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSR   33 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~   33 (148)
                      +++|++++||.|..|++.|. .++|..| +.|.++
T Consensus         4 ~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           4 EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             CcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            57899999999999999999 9999999 688875

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.05  E-value=3.4e-11  Score=57.60  Aligned_cols=31  Identities=16%  Similarity=0.246  Sum_probs=29.0

Q ss_pred             hHhhcCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           78 HKGENCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        78 h~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      |.++|++|+||.|++|+++|. .+.|..|+++
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~   33 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR   33 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGG
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhc
Confidence            678999999999999999999 9999999875

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=5.1e-11  Score=56.58  Aligned_cols=32  Identities=25%  Similarity=0.481  Sum_probs=29.2

Q ss_pred             CccCCCCcccCCCCCCCCC-cchHHHH-HhhcCC
Q 032068            2 AMTSDETTKICSHCDRAIP-SSNIDLH-FAHCSR   33 (148)
Q Consensus         2 ~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~   33 (148)
                      |+|+||+||.|..|++.|. .++|..| +.|.++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            6899999999999999999 9999999 677764

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=8.9e-11  Score=56.50  Aligned_cols=35  Identities=23%  Similarity=0.481  Sum_probs=31.2

Q ss_pred             CCCccCccchhccch-HHHHhhHh-hcCCCCcccCCC
Q 032068           58 HAPVACSQCSETMER-EILAIHKG-ENCPQRIVTCDF   92 (148)
Q Consensus        58 h~~~~C~~C~~~~~~-~~l~~h~~-~~~~~~~~~C~~   92 (148)
                      .+||.|..||+.|.. +.|..|++ +|++++||.|+.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            369999999999988 99999975 799999999973

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=9.1e-11  Score=56.45  Aligned_cols=35  Identities=23%  Similarity=0.534  Sum_probs=32.2

Q ss_pred             CCCCcccCCCCCCCCC-cchHHHH-H-hhcCCCCcccc
Q 032068            5 SDETTKICSHCDRAIP-SSNIDLH-F-AHCSRNLERCK   39 (148)
Q Consensus         5 ~~~~~~~C~~C~~~~~-~~~l~~H-~-~~~~~~~~~C~   39 (148)
                      +.+|||.|..|++.|. .++|..| + .|.+++||.|+
T Consensus         1 s~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            3579999999999999 9999999 6 69999999996

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.97  E-value=1.9e-10  Score=54.94  Aligned_cols=32  Identities=25%  Similarity=0.437  Sum_probs=28.4

Q ss_pred             CCccCCCCcccCCCCCCCCC-cchHHHH-HhhcC
Q 032068            1 MAMTSDETTKICSHCDRAIP-SSNIDLH-FAHCS   32 (148)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~   32 (148)
                      .|+|+|||||.|..|++.|. .++|..| +.|..
T Consensus         3 ~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           3 TRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             SSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            47899999999999999999 9999999 57753

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=1.2e-10  Score=56.04  Aligned_cols=32  Identities=22%  Similarity=0.385  Sum_probs=28.2

Q ss_pred             hhHhhcCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           77 IHKGENCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        77 ~h~~~~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      .|+++|++++||.|+.||+.|. .+.|..|+++
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~   34 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRT   34 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTT
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCcc
Confidence            4778899999999999999999 9999999875

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=2.4e-10  Score=54.10  Aligned_cols=30  Identities=20%  Similarity=0.390  Sum_probs=27.0

Q ss_pred             CccCCCCcccCCCCCCCCC-cchHHHH-Hhhc
Q 032068            2 AMTSDETTKICSHCDRAIP-SSNIDLH-FAHC   31 (148)
Q Consensus         2 ~~h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~   31 (148)
                      |+|+||+||.|+.|++.|. .++|..| +.+.
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHccccc
Confidence            6899999999999999999 9999999 5443

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=2.8e-10  Score=53.95  Aligned_cols=30  Identities=13%  Similarity=0.218  Sum_probs=27.2

Q ss_pred             hhcCCCCcccCCCCCCCCC-hhhHHHHHHHh
Q 032068           80 GENCPQRIVTCDFCEFPLP-AVDLAEHQVAI  109 (148)
Q Consensus        80 ~~~~~~~~~~C~~C~~~f~-~~~l~~H~~~c  109 (148)
                      ++|+|++||.|.+|+++|. .+.|..|+++.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H   31 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRY   31 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHT
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCccc
Confidence            4789999999999999999 99999999863

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=5.7e-10  Score=51.57  Aligned_cols=28  Identities=18%  Similarity=0.243  Sum_probs=23.7

Q ss_pred             hcCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           81 ENCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        81 ~~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      +|++++||.|.+|+++|. .+.|..|+++
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~   29 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRV   29 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHG
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccc
Confidence            478888888888888888 8888888875

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=5.5e-10  Score=52.83  Aligned_cols=29  Identities=10%  Similarity=0.273  Sum_probs=26.3

Q ss_pred             hhcCCCCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           80 GENCPQRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        80 ~~~~~~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      ++|+||+||.|+.|++.|. .+.|..|++.
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~   30 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQ   30 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHH
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHccc
Confidence            4789999999999999999 9999999754

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.82  E-value=7.5e-10  Score=51.85  Aligned_cols=30  Identities=23%  Similarity=0.386  Sum_probs=27.3

Q ss_pred             cCCCCcccCCCCCCCCC-cchHHHH-HhhcCC
Q 032068            4 TSDETTKICSHCDRAIP-SSNIDLH-FAHCSR   33 (148)
Q Consensus         4 h~~~~~~~C~~C~~~~~-~~~l~~H-~~~~~~   33 (148)
                      |+|||||.|..|++.|. .++|..| +.|...
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            78999999999999999 9999999 688764

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.80  E-value=8.7e-10  Score=51.63  Aligned_cols=28  Identities=18%  Similarity=0.328  Sum_probs=24.7

Q ss_pred             cCCCCcccCCCCCCCCC-hhhHHHHHHHh
Q 032068           82 NCPQRIVTCDFCEFPLP-AVDLAEHQVAI  109 (148)
Q Consensus        82 ~~~~~~~~C~~C~~~f~-~~~l~~H~~~c  109 (148)
                      ++|++||.|+.|++.|. ++.|+.|+++-
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~H   30 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVH   30 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGG
T ss_pred             CCCCccccCCCCCCcccChHHHHHHcccc
Confidence            57899999999999999 99999998764

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.73  E-value=2.4e-09  Score=48.01  Aligned_cols=28  Identities=21%  Similarity=0.482  Sum_probs=22.0

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQR   86 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~   86 (148)
                      +||.|+.|++.|.. +.|..|+++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            37788888888877 78888888888774

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=2.7e-09  Score=47.78  Aligned_cols=28  Identities=21%  Similarity=0.484  Sum_probs=21.3

Q ss_pred             CCccCccchhccch-HHHHhhHhhcCCCC
Q 032068           59 APVACSQCSETMER-EILAIHKGENCPQR   86 (148)
Q Consensus        59 ~~~~C~~C~~~~~~-~~l~~h~~~~~~~~   86 (148)
                      +||.|+.|++.|.. +.|..|+++|+||+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            36778888888877 77888888877764

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=1.9e-09  Score=50.87  Aligned_cols=32  Identities=22%  Similarity=0.505  Sum_probs=28.4

Q ss_pred             ccCc--cchhccch-HHHHhhHhhcCCCCcccCCC
Q 032068           61 VACS--QCSETMER-EILAIHKGENCPQRIVTCDF   92 (148)
Q Consensus        61 ~~C~--~C~~~~~~-~~l~~h~~~~~~~~~~~C~~   92 (148)
                      |.|+  .|++.|.. +.|..|+++|+|++||.|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            5675  59999988 99999999999999999974

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=5.4e-09  Score=45.24  Aligned_cols=23  Identities=22%  Similarity=0.314  Sum_probs=20.4

Q ss_pred             CcccCCCCCCCCC-hhhHHHHHHH
Q 032068           86 RIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        86 ~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      +||.|.+||++|. ++.|..|+++
T Consensus         1 KPy~C~eCgK~F~~~s~L~~Hqri   24 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRI   24 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccC
Confidence            6899999999999 9999999875

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.64  E-value=5e-09  Score=46.43  Aligned_cols=26  Identities=23%  Similarity=0.447  Sum_probs=23.4

Q ss_pred             CCcccCCCCCCCCC-cchHHHH-HhhcC
Q 032068            7 ETTKICSHCDRAIP-SSNIDLH-FAHCS   32 (148)
Q Consensus         7 ~~~~~C~~C~~~~~-~~~l~~H-~~~~~   32 (148)
                      ||||.|..|++.|. .++|..| +.|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            68999999999999 9999999 68865

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.64  E-value=7e-09  Score=45.94  Aligned_cols=24  Identities=21%  Similarity=0.400  Sum_probs=22.0

Q ss_pred             CCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           85 QRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        85 ~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      |+||.|+.|+++|. ++.|..|+++
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~   25 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRT   25 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHH
T ss_pred             CcCccCCCCcCEecccccccccCCC
Confidence            68999999999999 9999999886

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=1.7e-08  Score=45.10  Aligned_cols=27  Identities=19%  Similarity=0.449  Sum_probs=24.7

Q ss_pred             CcccCCCCCCCCC-cchHHHH-HhhcCCC
Q 032068            8 TTKICSHCDRAIP-SSNIDLH-FAHCSRN   34 (148)
Q Consensus         8 ~~~~C~~C~~~~~-~~~l~~H-~~~~~~~   34 (148)
                      |||.|..|++.|. .++|..| ++|.+++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            6899999999999 9999999 7999874

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.60  E-value=1.2e-08  Score=45.69  Aligned_cols=27  Identities=22%  Similarity=0.555  Sum_probs=24.6

Q ss_pred             CcccCCCCCCCCC-cchHHHH-HhhcCCC
Q 032068            8 TTKICSHCDRAIP-SSNIDLH-FAHCSRN   34 (148)
Q Consensus         8 ~~~~C~~C~~~~~-~~~l~~H-~~~~~~~   34 (148)
                      |||.|..|++.|. .++|..| +.|++++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            6899999999999 9999999 6999874

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=2.5e-08  Score=43.11  Aligned_cols=24  Identities=25%  Similarity=0.430  Sum_probs=20.7

Q ss_pred             CcccCCCCCCCCC-cchHHHH-Hhhc
Q 032068            8 TTKICSHCDRAIP-SSNIDLH-FAHC   31 (148)
Q Consensus         8 ~~~~C~~C~~~~~-~~~l~~H-~~~~   31 (148)
                      |||+|.+||++|. .++|..| +.|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            6899999999999 9999999 6763

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.41  E-value=4.9e-08  Score=48.70  Aligned_cols=32  Identities=22%  Similarity=0.337  Sum_probs=28.1

Q ss_pred             ccCCCCcccCCC--CCCCCC-cchHHHH-HhhcCCC
Q 032068            3 MTSDETTKICSH--CDRAIP-SSNIDLH-FAHCSRN   34 (148)
Q Consensus         3 ~h~~~~~~~C~~--C~~~~~-~~~l~~H-~~~~~~~   34 (148)
                      .|++++||.|..  |++.|. .++|..| +.|.+++
T Consensus        12 ~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            588999999965  999999 9999999 6998864

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=1.2e-07  Score=42.51  Aligned_cols=26  Identities=27%  Similarity=0.539  Sum_probs=15.6

Q ss_pred             CccCcc--chhccch-HHHHhhHhhcCCC
Q 032068           60 PVACSQ--CSETMER-EILAIHKGENCPQ   85 (148)
Q Consensus        60 ~~~C~~--C~~~~~~-~~l~~h~~~~~~~   85 (148)
                      ||.|+.  |++.|.. +.|..|+++|+||
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            556644  6666655 6666666666654

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=1.3e-07  Score=42.81  Aligned_cols=28  Identities=29%  Similarity=0.602  Sum_probs=21.1

Q ss_pred             CCccC--ccchhccch-HHHHhhHhhcCCCC
Q 032068           59 APVAC--SQCSETMER-EILAIHKGENCPQR   86 (148)
Q Consensus        59 ~~~~C--~~C~~~~~~-~~l~~h~~~~~~~~   86 (148)
                      +||.|  +.|++.|.. +.|..|+++|+||+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            36777  468888877 78888888888774

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=1.2e-07  Score=44.45  Aligned_cols=30  Identities=17%  Similarity=0.392  Sum_probs=27.2

Q ss_pred             ccCC--CCCCCCC-cchHHHH-HhhcCCCCcccc
Q 032068           10 KICS--HCDRAIP-SSNIDLH-FAHCSRNLERCK   39 (148)
Q Consensus        10 ~~C~--~C~~~~~-~~~l~~H-~~~~~~~~~~C~   39 (148)
                      |.|.  .|++.|. ..+|..| +.|.+++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            6785  4999999 9999999 799999999996

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.30  E-value=3.2e-08  Score=49.41  Aligned_cols=35  Identities=14%  Similarity=0.343  Sum_probs=27.9

Q ss_pred             HHHHhhHhhcCCCCcccCCC--CCCCCC-hhhHHHHHHH
Q 032068           73 EILAIHKGENCPQRIVTCDF--CEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        73 ~~l~~h~~~~~~~~~~~C~~--C~~~f~-~~~l~~H~~~  108 (148)
                      ..|..|+ .+.+++||.|++  |++.|. .+.|..|+++
T Consensus         5 ~~l~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~   42 (47)
T d1ncsa_           5 GSIDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQT   42 (47)
T ss_dssp             SSGGGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHH
T ss_pred             chhcchh-hccCCCCeECCcCCCCccccCchHHHhhccc
Confidence            3455666 488999999976  999998 8899999876

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=1.4e-07  Score=42.30  Aligned_cols=26  Identities=19%  Similarity=0.349  Sum_probs=14.2

Q ss_pred             CccCcc--chhccch-HHHHhhHhhcCCC
Q 032068           60 PVACSQ--CSETMER-EILAIHKGENCPQ   85 (148)
Q Consensus        60 ~~~C~~--C~~~~~~-~~l~~h~~~~~~~   85 (148)
                      ||.|+.  |++.|.. +.|..|+++|+||
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCCC
Confidence            455533  5566555 5556665555553

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=4.3e-07  Score=40.62  Aligned_cols=26  Identities=19%  Similarity=0.519  Sum_probs=22.8

Q ss_pred             CcccCCC--CCCCCC-cchHHHH-HhhcCC
Q 032068            8 TTKICSH--CDRAIP-SSNIDLH-FAHCSR   33 (148)
Q Consensus         8 ~~~~C~~--C~~~~~-~~~l~~H-~~~~~~   33 (148)
                      |||.|..  |++.|. .++|..| +.|.++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6899976  999999 9999999 788874

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=5.4e-07  Score=40.69  Aligned_cols=27  Identities=22%  Similarity=0.507  Sum_probs=23.5

Q ss_pred             CcccC--CCCCCCCC-cchHHHH-HhhcCCC
Q 032068            8 TTKIC--SHCDRAIP-SSNIDLH-FAHCSRN   34 (148)
Q Consensus         8 ~~~~C--~~C~~~~~-~~~l~~H-~~~~~~~   34 (148)
                      |||.|  +.|++.|. .++|..| +.|.+++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            68999  57999999 9999999 6998864

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.08  E-value=9e-07  Score=40.15  Aligned_cols=25  Identities=28%  Similarity=0.555  Sum_probs=21.7

Q ss_pred             CCcccCCC--CCCCCC-hhhHHHHHHHh
Q 032068           85 QRIVTCDF--CEFPLP-AVDLAEHQVAI  109 (148)
Q Consensus        85 ~~~~~C~~--C~~~f~-~~~l~~H~~~c  109 (148)
                      |+||.|++  |++.|. .+.|..|+++-
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~H   28 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSH   28 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGG
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhc
Confidence            68999987  999999 99999998763

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=7.4e-07  Score=39.87  Aligned_cols=26  Identities=19%  Similarity=0.428  Sum_probs=22.7

Q ss_pred             CcccCCC--CCCCCC-cchHHHH-HhhcCC
Q 032068            8 TTKICSH--CDRAIP-SSNIDLH-FAHCSR   33 (148)
Q Consensus         8 ~~~~C~~--C~~~~~-~~~l~~H-~~~~~~   33 (148)
                      |||.|..  |++.|. .++|..| +.|.++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6899965  999999 9999999 688874

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=1.4e-06  Score=38.21  Aligned_cols=23  Identities=26%  Similarity=0.626  Sum_probs=20.1

Q ss_pred             CcccCCC--CCCCCC-hhhHHHHHHH
Q 032068           86 RIVTCDF--CEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        86 ~~~~C~~--C~~~f~-~~~l~~H~~~  108 (148)
                      +||.|++  |+++|. .++|+.|+++
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~   26 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILT   26 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhh
Confidence            6899987  999999 8999999875

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.01  E-value=2.2e-06  Score=38.83  Aligned_cols=26  Identities=27%  Similarity=0.571  Sum_probs=22.3

Q ss_pred             CCcccCCC--CCCCCC-cchHHHH-HhhcC
Q 032068            7 ETTKICSH--CDRAIP-SSNIDLH-FAHCS   32 (148)
Q Consensus         7 ~~~~~C~~--C~~~~~-~~~l~~H-~~~~~   32 (148)
                      |+||.|..  |++.|. .++|..| +.|..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            68999965  999999 9999999 68765

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=4.1e-06  Score=39.01  Aligned_cols=31  Identities=10%  Similarity=0.285  Sum_probs=27.0

Q ss_pred             CCCCcccCCCCCCCCC-hhhHHHHHHHhcccc
Q 032068           83 CPQRIVTCDFCEFPLP-AVDLAEHQVAIVNNF  113 (148)
Q Consensus        83 ~~~~~~~C~~C~~~f~-~~~l~~H~~~c~~~~  113 (148)
                      +|-+||.|..|++.|+ +..+..|...|.++.
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~C~k~~   32 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTSCTKSY   32 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhhhhhhc
Confidence            4679999999999999 999999988886654

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.87  E-value=2.6e-06  Score=37.68  Aligned_cols=23  Identities=26%  Similarity=0.540  Sum_probs=19.4

Q ss_pred             CcccCCC--CCCCCC-hhhHHHHHHH
Q 032068           86 RIVTCDF--CEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        86 ~~~~C~~--C~~~f~-~~~l~~H~~~  108 (148)
                      +||.|++  |+++|. .+.|+.|+++
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~   26 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRI   26 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCc
Confidence            5888977  999998 8899998875

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.85  E-value=2.9e-06  Score=37.48  Aligned_cols=25  Identities=28%  Similarity=0.569  Sum_probs=21.4

Q ss_pred             CcccCCC--CCCCCC-cchHHHH-HhhcC
Q 032068            8 TTKICSH--CDRAIP-SSNIDLH-FAHCS   32 (148)
Q Consensus         8 ~~~~C~~--C~~~~~-~~~l~~H-~~~~~   32 (148)
                      |||.|..  |++.|. .++|..| +.|.|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6899955  999999 9999999 78864

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.79  E-value=4.6e-06  Score=35.38  Aligned_cols=24  Identities=17%  Similarity=0.433  Sum_probs=19.8

Q ss_pred             CCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           85 QRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        85 ~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      |+||.|..||+.|. +...+.|.++
T Consensus         1 EkPf~C~~CgrkFArsderkRH~ki   25 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKI   25 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhh
Confidence            58999999999999 7777778765

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=6.9e-06  Score=35.87  Aligned_cols=24  Identities=25%  Similarity=0.747  Sum_probs=20.0

Q ss_pred             CcccCCC--CCCCCC-cchHHHH-Hhhc
Q 032068            8 TTKICSH--CDRAIP-SSNIDLH-FAHC   31 (148)
Q Consensus         8 ~~~~C~~--C~~~~~-~~~l~~H-~~~~   31 (148)
                      |||.|..  |++.|. .++|..| +.|.
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899955  999999 9999999 6763

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=6.2e-06  Score=36.32  Aligned_cols=30  Identities=23%  Similarity=0.367  Sum_probs=26.7

Q ss_pred             CccCccchhccch-HHHHhhHhhcCCCCccc
Q 032068           60 PVACSQCSETMER-EILAIHKGENCPQRIVT   89 (148)
Q Consensus        60 ~~~C~~C~~~~~~-~~l~~h~~~~~~~~~~~   89 (148)
                      ...|..||+.|.. ..|+.|...|.+|+||.
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            4679999999988 99999999999999984

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=1.6e-05  Score=33.21  Aligned_cols=25  Identities=28%  Similarity=0.711  Sum_probs=21.4

Q ss_pred             cccCCCCCCCCC-cchHHHH-HhhcCC
Q 032068            9 TKICSHCDRAIP-SSNIDLH-FAHCSR   33 (148)
Q Consensus         9 ~~~C~~C~~~~~-~~~l~~H-~~~~~~   33 (148)
                      ...|.+||++|. .+.|++| +.|.++
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            357999999999 9999999 788764

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=1.1e-05  Score=35.49  Aligned_cols=29  Identities=14%  Similarity=0.387  Sum_probs=25.9

Q ss_pred             CcccCCCCCCCCC-cchHHHH-HhhcCCCCc
Q 032068            8 TTKICSHCDRAIP-SSNIDLH-FAHCSRNLE   36 (148)
Q Consensus         8 ~~~~C~~C~~~~~-~~~l~~H-~~~~~~~~~   36 (148)
                      +...|+.||+.|. .-+|..| +.|++++||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            4568999999999 8999999 799999987

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.41  E-value=3.5e-05  Score=35.79  Aligned_cols=28  Identities=14%  Similarity=0.433  Sum_probs=23.8

Q ss_pred             CCCCcccCCCCCCCCC-cchHHHHHhhcC
Q 032068            5 SDETTKICSHCDRAIP-SSNIDLHFAHCS   32 (148)
Q Consensus         5 ~~~~~~~C~~C~~~~~-~~~l~~H~~~~~   32 (148)
                      +|-|||.|..|++.|. +..+..|..+|.
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~C~   29 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTSCT   29 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhhhh
Confidence            5789999999999999 999998866654

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.31  E-value=4.5e-05  Score=32.26  Aligned_cols=21  Identities=29%  Similarity=0.512  Sum_probs=12.5

Q ss_pred             CCcccCCCCCCCCC-cchHHHH
Q 032068            7 ETTKICSHCDRAIP-SSNIDLH   27 (148)
Q Consensus         7 ~~~~~C~~C~~~~~-~~~l~~H   27 (148)
                      |+||.|..|++.|. ......|
T Consensus         1 EkPf~C~~CgrkFArsderkRH   22 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRH   22 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHH
T ss_pred             CCCcccchhhhhhhcchhhhhh
Confidence            45666666666666 4455555

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=7.6e-05  Score=31.13  Aligned_cols=25  Identities=16%  Similarity=0.368  Sum_probs=18.8

Q ss_pred             ccCccchhccch-HHHHhhHhhcCCC
Q 032068           61 VACSQCSETMER-EILAIHKGENCPQ   85 (148)
Q Consensus        61 ~~C~~C~~~~~~-~~l~~h~~~~~~~   85 (148)
                      ..|..||+.|.. +.|..|+..|+||
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            457788888866 7888888777764

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.19  E-value=0.00011  Score=30.04  Aligned_cols=20  Identities=25%  Similarity=0.579  Sum_probs=8.0

Q ss_pred             Cccchhccch-HHHHhhHhhc
Q 032068           63 CSQCSETMER-EILAIHKGEN   82 (148)
Q Consensus        63 C~~C~~~~~~-~~l~~h~~~~   82 (148)
                      |+.|++-|+. ..|..|.+.|
T Consensus         4 c~~c~kcfsrkdklk~hmr~h   24 (26)
T d2dmda2           4 CEVCGKCFSRKDKLKTHMRCH   24 (26)
T ss_dssp             BTTTTBCCCCHHHHHHHGGGC
T ss_pred             cchhhhHhcchhHHHHHhhcc
Confidence            3444444433 3344444333

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=0.00015  Score=30.56  Aligned_cols=26  Identities=19%  Similarity=0.436  Sum_probs=18.9

Q ss_pred             ccCccchhccch-HHHHhhHhhcCCCC
Q 032068           61 VACSQCSETMER-EILAIHKGENCPQR   86 (148)
Q Consensus        61 ~~C~~C~~~~~~-~~l~~h~~~~~~~~   86 (148)
                      |.|+.|+....- +-|..|+++|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            667777777755 77778888777763

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=0.00017  Score=29.96  Aligned_cols=23  Identities=17%  Similarity=0.504  Sum_probs=20.7

Q ss_pred             CcccCCCCCCCCC-hhhHHHHHHH
Q 032068           86 RIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        86 ~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      +||+|..|..+-. ++.|+.|+++
T Consensus         2 kp~kck~cdyaaadsssl~kh~ri   25 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRI   25 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccccccchhcchhhHhhhhhc
Confidence            7899999999877 9999999986

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=0.00012  Score=31.37  Aligned_cols=26  Identities=19%  Similarity=0.386  Sum_probs=17.6

Q ss_pred             CCcccCCCCCCCCC-cchHHHH-HhhcC
Q 032068            7 ETTKICSHCDRAIP-SSNIDLH-FAHCS   32 (148)
Q Consensus         7 ~~~~~C~~C~~~~~-~~~l~~H-~~~~~   32 (148)
                      |+||.|+.|+..|. +..+.-| +.|.+
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            46777777777777 6666666 56655

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.01  E-value=0.00016  Score=29.51  Aligned_cols=23  Identities=17%  Similarity=0.533  Sum_probs=14.3

Q ss_pred             cccCCCCCCCCC-cchHHHH-Hhhc
Q 032068            9 TKICSHCDRAIP-SSNIDLH-FAHC   31 (148)
Q Consensus         9 ~~~C~~C~~~~~-~~~l~~H-~~~~   31 (148)
                      |..|+.|++.|+ +.+|..| +.|.
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccC
Confidence            456667777777 6666666 4443

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.98  E-value=0.00016  Score=30.30  Aligned_cols=24  Identities=21%  Similarity=0.529  Sum_probs=20.9

Q ss_pred             CCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           85 QRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        85 ~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      ++||+|..|...-. +++|..|++.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~   25 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRS   25 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTT
T ss_pred             CCcceeeecccccCCchheEEeeec
Confidence            58999999999888 9999999863

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00021  Score=30.55  Aligned_cols=24  Identities=13%  Similarity=0.383  Sum_probs=18.7

Q ss_pred             CCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           85 QRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        85 ~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      |+||.|+.|+..|. +.-+.-|.+.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrs   25 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRS   25 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHH
T ss_pred             CCCcccchHHHHhhccccceEeeec
Confidence            58999999999999 6555666554

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.90  E-value=0.00024  Score=29.90  Aligned_cols=22  Identities=23%  Similarity=0.644  Sum_probs=19.9

Q ss_pred             cccCCCCCCCCC-hhhHHHHHHH
Q 032068           87 IVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        87 ~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      ||.|..|+++|. ..+|..|++.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            789999999999 9999999863

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.83  E-value=0.00042  Score=29.06  Aligned_cols=23  Identities=17%  Similarity=0.381  Sum_probs=18.7

Q ss_pred             CcccCCC--CCCCCC-hhhHHHHHHH
Q 032068           86 RIVTCDF--CEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        86 ~~~~C~~--C~~~f~-~~~l~~H~~~  108 (148)
                      .||.|+.  |++.|. -+-|+.|.++
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekv   27 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKV   27 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhc
Confidence            5788876  888888 8888888765

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.77  E-value=0.00023  Score=29.79  Aligned_cols=26  Identities=31%  Similarity=0.460  Sum_probs=19.6

Q ss_pred             CCcccCCCCCCCCC-cchHHHH-HhhcC
Q 032068            7 ETTKICSHCDRAIP-SSNIDLH-FAHCS   32 (148)
Q Consensus         7 ~~~~~C~~C~~~~~-~~~l~~H-~~~~~   32 (148)
                      |+||+|..|...-. .+.|..| +.|.+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            57888888888777 7778888 56654

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.00044  Score=29.16  Aligned_cols=24  Identities=25%  Similarity=0.679  Sum_probs=20.9

Q ss_pred             CcccCCCCCCCCC-hhhHHHHHHHh
Q 032068           86 RIVTCDFCEFPLP-AVDLAEHQVAI  109 (148)
Q Consensus        86 ~~~~C~~C~~~f~-~~~l~~H~~~c  109 (148)
                      +||+|.+|++... .++|..|.+.+
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~   25 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKF   25 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHHH
Confidence            5899999999888 99999998764

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.72  E-value=0.00038  Score=28.04  Aligned_cols=20  Identities=25%  Similarity=0.429  Sum_probs=17.5

Q ss_pred             cccCCCCCCCCC-hhhHHHHH
Q 032068           87 IVTCDFCEFPLP-AVDLAEHQ  106 (148)
Q Consensus        87 ~~~C~~C~~~f~-~~~l~~H~  106 (148)
                      ||+|..|+..|. +..|+.|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            788999999998 88898886

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.70  E-value=0.00042  Score=28.37  Aligned_cols=25  Identities=16%  Similarity=0.493  Sum_probs=19.1

Q ss_pred             cCccchhccch-HHHHhhHhhcCCCC
Q 032068           62 ACSQCSETMER-EILAIHKGENCPQR   86 (148)
Q Consensus        62 ~C~~C~~~~~~-~~l~~h~~~~~~~~   86 (148)
                      +|+.|.+.|.+ ..|..|-+.|+||+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            57788888877 77788877787764

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.52  E-value=0.00066  Score=27.33  Aligned_cols=21  Identities=29%  Similarity=0.567  Sum_probs=17.3

Q ss_pred             ccCCCCCCCCC-hhhHHHHHHH
Q 032068           88 VTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        88 ~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      |+|..|.++|. ++.|..|+++
T Consensus         1 ykcglcersfveksalsrhqrv   22 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRV   22 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGG
T ss_pred             CcccchHHHHHHHHHHHHHHHh
Confidence            57888888888 8888888775

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.0014  Score=27.61  Aligned_cols=25  Identities=32%  Similarity=0.477  Sum_probs=20.2

Q ss_pred             CcccCCCCCCCCC-cchHHHH-H-hhcC
Q 032068            8 TTKICSHCDRAIP-SSNIDLH-F-AHCS   32 (148)
Q Consensus         8 ~~~~C~~C~~~~~-~~~l~~H-~-~~~~   32 (148)
                      +||+|..|..... .++|+.| . .|..
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccccccccccccchhhhhhhhccccc
Confidence            5899999998888 8899999 5 4543

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.46  E-value=0.0014  Score=27.64  Aligned_cols=23  Identities=26%  Similarity=0.677  Sum_probs=19.7

Q ss_pred             CcccCCCCCCCCC-hhhHHHHHHH
Q 032068           86 RIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        86 ~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      +||.|..|...-. +++|+.|.+.
T Consensus         1 kpy~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhhc
Confidence            5899999998877 8999999864

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.17  E-value=0.0016  Score=27.35  Aligned_cols=26  Identities=15%  Similarity=0.482  Sum_probs=20.8

Q ss_pred             CcccC--CCCCCCCC-cchHHHH-HhhcCC
Q 032068            8 TTKIC--SHCDRAIP-SSNIDLH-FAHCSR   33 (148)
Q Consensus         8 ~~~~C--~~C~~~~~-~~~l~~H-~~~~~~   33 (148)
                      +||.|  +.|.+.|. ..+|.+| +.|.++
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            57778  56999999 8899999 788763

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.01  E-value=0.0033  Score=25.82  Aligned_cols=21  Identities=24%  Similarity=0.311  Sum_probs=17.3

Q ss_pred             cccCCCCCCCCC-hhhHHHHHH
Q 032068           87 IVTCDFCEFPLP-AVDLAEHQV  107 (148)
Q Consensus        87 ~~~C~~C~~~f~-~~~l~~H~~  107 (148)
                      ||.|..||+.+. +.+|.+|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            688999999855 889998875

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.99  E-value=0.0017  Score=27.12  Aligned_cols=23  Identities=26%  Similarity=0.537  Sum_probs=18.3

Q ss_pred             CcccCC--CCCCCCC-cchHHHH-Hhh
Q 032068            8 TTKICS--HCDRAIP-SSNIDLH-FAH   30 (148)
Q Consensus         8 ~~~~C~--~C~~~~~-~~~l~~H-~~~   30 (148)
                      .||.|+  .|++.|. .+.|++| ..|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            578884  5999999 8999988 554

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.85  E-value=0.0014  Score=28.19  Aligned_cols=22  Identities=18%  Similarity=0.329  Sum_probs=16.3

Q ss_pred             cccCCCCCCCCC-hhhHHHHHHH
Q 032068           87 IVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        87 ~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      ||.|..|++.|. +..|-.|+.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTT
T ss_pred             CcccccccchhhHHHHHHHHHHH
Confidence            678888888888 6677777653

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.78  E-value=0.0024  Score=27.17  Aligned_cols=21  Identities=19%  Similarity=0.395  Sum_probs=9.4

Q ss_pred             cccCCC--CCCCCC-hhhHHHHHH
Q 032068           87 IVTCDF--CEFPLP-AVDLAEHQV  107 (148)
Q Consensus        87 ~~~C~~--C~~~f~-~~~l~~H~~  107 (148)
                      ||.|..  |++++. -++|..|.+
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k   25 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVK   25 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHH
T ss_pred             CeecccCCCCcccCCHHHHHHHHH
Confidence            444433  444444 444444443

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.77  E-value=0.004  Score=26.04  Aligned_cols=25  Identities=24%  Similarity=0.408  Sum_probs=21.4

Q ss_pred             ccCCCCCCCCC-cchHHHH-HhhcCCC
Q 032068           10 KICSHCDRAIP-SSNIDLH-FAHCSRN   34 (148)
Q Consensus        10 ~~C~~C~~~~~-~~~l~~H-~~~~~~~   34 (148)
                      |.|+.|+..-. .+-|+.| +.|.+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            78999999988 8999999 8888763

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.73  E-value=0.0047  Score=25.15  Aligned_cols=24  Identities=17%  Similarity=0.462  Sum_probs=18.8

Q ss_pred             cCCCCCCCCC-cchHHHH-HhhcCCC
Q 032068           11 ICSHCDRAIP-SSNIDLH-FAHCSRN   34 (148)
Q Consensus        11 ~C~~C~~~~~-~~~l~~H-~~~~~~~   34 (148)
                      +|+.|.+.|. +--|+.| +.|.+++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            5888888888 7788888 7887753

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.66  E-value=0.0036  Score=26.14  Aligned_cols=27  Identities=26%  Similarity=0.565  Sum_probs=21.5

Q ss_pred             CCcccCCCCCCCCC-cchHHHHH-hhcCC
Q 032068            7 ETTKICSHCDRAIP-SSNIDLHF-AHCSR   33 (148)
Q Consensus         7 ~~~~~C~~C~~~~~-~~~l~~H~-~~~~~   33 (148)
                      +.-|.|..|.+.|. +..|..|+ .|.++
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            34688999999999 88999994 77663

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.63  E-value=0.004  Score=26.46  Aligned_cols=22  Identities=23%  Similarity=0.507  Sum_probs=17.8

Q ss_pred             CCccC--ccchhccch-HHHHhhHh
Q 032068           59 APVAC--SQCSETMER-EILAIHKG   80 (148)
Q Consensus        59 ~~~~C--~~C~~~~~~-~~l~~h~~   80 (148)
                      +||.|  ..|++.+.. +.|+.|++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k   25 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVK   25 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHH
T ss_pred             CCeecccCCCCcccCCHHHHHHHHH
Confidence            37888  458899988 99999975

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.61  E-value=0.0017  Score=27.96  Aligned_cols=22  Identities=32%  Similarity=0.570  Sum_probs=18.8

Q ss_pred             CcccCCC--CCCCCC-hhhHHHHHH
Q 032068           86 RIVTCDF--CEFPLP-AVDLAEHQV  107 (148)
Q Consensus        86 ~~~~C~~--C~~~f~-~~~l~~H~~  107 (148)
                      +||.|++  |.++|+ .+....|+.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqn   25 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQN   25 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHH
T ss_pred             CCccccCCChhhhhcchhhhhhhcc
Confidence            6899987  999999 888888873

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.51  E-value=0.0022  Score=25.73  Aligned_cols=20  Identities=20%  Similarity=0.549  Sum_probs=17.1

Q ss_pred             cccCCCCCCCCC-cchHHHHH
Q 032068            9 TKICSHCDRAIP-SSNIDLHF   28 (148)
Q Consensus         9 ~~~C~~C~~~~~-~~~l~~H~   28 (148)
                      ||.|..|...|. +.+|+.|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            788999999988 88888884

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.41  E-value=0.0044  Score=28.13  Aligned_cols=25  Identities=20%  Similarity=0.652  Sum_probs=19.4

Q ss_pred             CCCcccC--CCCCCCCC-cchHHHH-Hhh
Q 032068            6 DETTKIC--SHCDRAIP-SSNIDLH-FAH   30 (148)
Q Consensus         6 ~~~~~~C--~~C~~~~~-~~~l~~H-~~~   30 (148)
                      .+|||.|  +.|+..|. ..+|..| ..|
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhh
Confidence            4788888  67888888 8888888 444

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=95.29  E-value=0.0052  Score=24.59  Aligned_cols=21  Identities=29%  Similarity=0.588  Sum_probs=15.6

Q ss_pred             ccCCCCCCCCC-cchHHHH-Hhh
Q 032068           10 KICSHCDRAIP-SSNIDLH-FAH   30 (148)
Q Consensus        10 ~~C~~C~~~~~-~~~l~~H-~~~   30 (148)
                      |.|..|.+.|. ++.|..| +.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            56778888888 8888887 454

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.26  E-value=0.0041  Score=25.63  Aligned_cols=24  Identities=33%  Similarity=0.555  Sum_probs=18.3

Q ss_pred             CcccCCCCCCCCC-cchHHHH-Hhhc
Q 032068            8 TTKICSHCDRAIP-SSNIDLH-FAHC   31 (148)
Q Consensus         8 ~~~~C~~C~~~~~-~~~l~~H-~~~~   31 (148)
                      +||.|..|..+-. .+.|..| +.|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            5788888888877 7788888 5654

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.18  E-value=0.0052  Score=28.00  Aligned_cols=24  Identities=21%  Similarity=0.386  Sum_probs=11.5

Q ss_pred             CccCccchhccch-HHHHhhHhhcC
Q 032068           60 PVACSQCSETMER-EILAIHKGENC   83 (148)
Q Consensus        60 ~~~C~~C~~~~~~-~~l~~h~~~~~   83 (148)
                      .|.|..|++.|.. ..|=.|++.|.
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTC
T ss_pred             ccCCCCCCCccCCcccccchHhhhc
Confidence            3445555555544 44444544443

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.86  E-value=0.0081  Score=27.34  Aligned_cols=24  Identities=33%  Similarity=0.562  Sum_probs=21.0

Q ss_pred             CCcccCCCCCCCCC-hhhHHHHHHH
Q 032068           85 QRIVTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        85 ~~~~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      .+.|.|..|++.|. ...|-.|++.
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~   27 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNV   27 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHT
T ss_pred             CCccCCCCCCCccCCcccccchHhh
Confidence            46799999999999 8899999864

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.38  E-value=0.012  Score=24.21  Aligned_cols=24  Identities=33%  Similarity=0.661  Sum_probs=14.0

Q ss_pred             ccCccchhccch-HHHHhhHhhcCC
Q 032068           61 VACSQCSETMER-EILAIHKGENCP   84 (148)
Q Consensus        61 ~~C~~C~~~~~~-~~l~~h~~~~~~   84 (148)
                      -.|+.|.-+.+. ..|+.|.++|+.
T Consensus         3 ekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             ccCcccccccCcHHHHHHhhccccC
Confidence            345566555555 566666666653

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.21  E-value=0.02  Score=25.89  Aligned_cols=25  Identities=20%  Similarity=0.292  Sum_probs=19.1

Q ss_pred             CCCcccCC--CCCCCCC-hhhHHHHHHH
Q 032068           84 PQRIVTCD--FCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        84 ~~~~~~C~--~C~~~f~-~~~l~~H~~~  108 (148)
                      .++||.|.  -|+.+|. -..|..|.+.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~K   30 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHK   30 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhh
Confidence            47888884  4888888 7788887664

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.21  E-value=0.012  Score=25.71  Aligned_cols=24  Identities=17%  Similarity=0.307  Sum_probs=17.6

Q ss_pred             cccCCCCCCCCC-hhhHHHHHHHhc
Q 032068           87 IVTCDFCEFPLP-AVDLAEHQVAIV  110 (148)
Q Consensus        87 ~~~C~~C~~~f~-~~~l~~H~~~c~  110 (148)
                      .|.|..|++.|. +-.+..|...|.
T Consensus         4 afvcskcgktftrrntm~rha~nc~   28 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCA   28 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCC
T ss_pred             eeeecccccchhcchHHHHHhhhcC
Confidence            467888888888 777777776663

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.85  E-value=0.035  Score=22.16  Aligned_cols=21  Identities=19%  Similarity=0.429  Sum_probs=17.5

Q ss_pred             ccCCCCCCCCC-hhhHHHHHHH
Q 032068           88 VTCDFCEFPLP-AVDLAEHQVA  108 (148)
Q Consensus        88 ~~C~~C~~~f~-~~~l~~H~~~  108 (148)
                      |.|+.|-+.|. +.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            67899988888 8888888765

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.81  E-value=0.031  Score=22.90  Aligned_cols=20  Identities=25%  Similarity=0.536  Sum_probs=14.7

Q ss_pred             ccCCCCCCCCC-hhhHHHHHH
Q 032068           88 VTCDFCEFPLP-AVDLAEHQV  107 (148)
Q Consensus        88 ~~C~~C~~~f~-~~~l~~H~~  107 (148)
                      |.|+.|+-.+. ++.|..|++
T Consensus         3 ~qcphc~tiiarksdlrvhlr   23 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLR   23 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhh
Confidence            56788877666 777777765

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=91.32  E-value=0.065  Score=23.11  Aligned_cols=24  Identities=29%  Similarity=0.566  Sum_probs=19.7

Q ss_pred             cccCCCCCCCCC-cchHHHH-HhhcC
Q 032068            9 TKICSHCDRAIP-SSNIDLH-FAHCS   32 (148)
Q Consensus         9 ~~~C~~C~~~~~-~~~l~~H-~~~~~   32 (148)
                      .|.|..||-.|. .+.|..| ..+|.
T Consensus         8 rf~c~pcgirfss~stleahqtyycs   33 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQAYYCS   33 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTTTTTC
T ss_pred             ceeccccceeecChhHHHhhhheeee
Confidence            478999999999 9999999 45554

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.64  E-value=0.081  Score=25.05  Aligned_cols=20  Identities=15%  Similarity=0.426  Sum_probs=17.9

Q ss_pred             cccCCCCCCCCC-cchHHHHH
Q 032068            9 TKICSHCDRAIP-SSNIDLHF   28 (148)
Q Consensus         9 ~~~C~~C~~~~~-~~~l~~H~   28 (148)
                      .+.|..|++.|+ ...|+.|+
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HE   26 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHE   26 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhH
Confidence            478999999999 99999994

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.20  E-value=0.04  Score=24.23  Aligned_cols=19  Identities=11%  Similarity=0.219  Sum_probs=14.7

Q ss_pred             hhccch-HHHHhhHhhcCCC
Q 032068           67 SETMER-EILAIHKGENCPQ   85 (148)
Q Consensus        67 ~~~~~~-~~l~~h~~~~~~~   85 (148)
                      ++.|.. ..|..|++.|+||
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            345756 8899999999876

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.35  E-value=0.28  Score=20.22  Aligned_cols=21  Identities=24%  Similarity=0.654  Sum_probs=15.8

Q ss_pred             cccCCCCCCCCC-cchHHHH-Hh
Q 032068            9 TKICSHCDRAIP-SSNIDLH-FA   29 (148)
Q Consensus         9 ~~~C~~C~~~~~-~~~l~~H-~~   29 (148)
                      .|.|..|++... ...++-| +.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHH
T ss_pred             ceechhHHHHHhhccCceEEEee
Confidence            367888888887 7777777 53

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=87.88  E-value=0.14  Score=24.08  Aligned_cols=21  Identities=33%  Similarity=0.569  Sum_probs=14.2

Q ss_pred             CCcccCCCCCCCCC-cchHHHH
Q 032068            7 ETTKICSHCDRAIP-SSNIDLH   27 (148)
Q Consensus         7 ~~~~~C~~C~~~~~-~~~l~~H   27 (148)
                      +.|..|+.|+..+. ..+|..|
T Consensus        22 ~qpatcpic~avirqsrnlrrh   43 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRH   43 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHH
T ss_pred             cCCCCCchHHHHHHHHHHHHHH
Confidence            44667777777776 6677776

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.08  E-value=0.41  Score=22.51  Aligned_cols=25  Identities=24%  Similarity=0.429  Sum_probs=17.8

Q ss_pred             cccCCCCCCCCC-hhhHHHHHHHhcc
Q 032068           87 IVTCDFCEFPLP-AVDLAEHQVAIVN  111 (148)
Q Consensus        87 ~~~C~~C~~~f~-~~~l~~H~~~c~~  111 (148)
                      .+.|..|++.|. -..|..|....+-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             eeeccccccccCCHHHHhHhHHhcCc
Confidence            456777888888 7777777766544

>d1wjpa2 g.37.1.1 (A:43-66) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.85  E-value=0.33  Score=19.25  Aligned_cols=21  Identities=24%  Similarity=0.659  Sum_probs=14.1

Q ss_pred             cCCCCCCCCChhhH-HHHHHHh
Q 032068           89 TCDFCEFPLPAVDL-AEHQVAI  109 (148)
Q Consensus        89 ~C~~C~~~f~~~~l-~~H~~~c  109 (148)
                      .|+.|+..|.+..| ++|...|
T Consensus         2 vcpycslrf~sp~lk~ehe~kc   23 (26)
T d1wjpa2           2 VCPYCSLRFFSPELKQEHESKC   23 (26)
T ss_dssp             CCTTTCCCBSSHHHHHHHHHHC
T ss_pred             CCCcceeeeCCHHHhhHhhhhc
Confidence            58888888875544 4566555

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=85.16  E-value=0.25  Score=19.90  Aligned_cols=20  Identities=30%  Similarity=0.589  Sum_probs=14.1

Q ss_pred             ccCCC--CCCCCC-hhhHHHHHH
Q 032068           88 VTCDF--CEFPLP-AVDLAEHQV  107 (148)
Q Consensus        88 ~~C~~--C~~~f~-~~~l~~H~~  107 (148)
                      |.|.+  |+++|. ..+|+.|+-
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf   24 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQF   24 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEee
Confidence            45643  888888 777877763

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=84.56  E-value=0.32  Score=21.74  Aligned_cols=27  Identities=19%  Similarity=0.576  Sum_probs=17.8

Q ss_pred             CCcccCCCCCCCCCcchHHHHHhhcCCCCccccccCCc
Q 032068            7 ETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDM   44 (148)
Q Consensus         7 ~~~~~C~~C~~~~~~~~l~~H~~~~~~~~~~C~~C~~~   44 (148)
                      ++.|.|..||...           .++.|-.|+.|+..
T Consensus         3 ~~~~vC~vCGyi~-----------~g~~Pe~CPvCg~~   29 (36)
T d1yuza2           3 DKFHLCPICGYIH-----------KGEDFEKCPICFRP   29 (36)
T ss_dssp             CCEEECSSSCCEE-----------ESSCCSBCTTTCCB
T ss_pred             CCEEECCCCCCEe-----------eCCCCCcCCCCCCc
Confidence            4567888888753           24456678888754

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.21  E-value=0.48  Score=23.93  Aligned_cols=14  Identities=21%  Similarity=0.491  Sum_probs=7.0

Q ss_pred             CccccccCCccChh
Q 032068           35 LERCKVCGDMVPRK   48 (148)
Q Consensus        35 ~~~C~~C~~~f~~~   48 (148)
                      .|.|+.|++.|...
T Consensus        14 ~y~Cp~C~~~ys~L   27 (62)
T d1vd4a_          14 SFKCPVCSSTFTDL   27 (62)
T ss_dssp             EEECSSSCCEEEHH
T ss_pred             ceECCCCCCCcchh
Confidence            34555555555443

>d1k2fa_ b.8.1.2 (A:) SIAH, seven in absentia homolog {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: TRAF domain-like
superfamily: TRAF domain-like
family: SIAH, seven in absentia homolog
domain: SIAH, seven in absentia homolog
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=81.08  E-value=1.1  Score=27.82  Aligned_cols=47  Identities=19%  Similarity=0.341  Sum_probs=36.6

Q ss_pred             CCCCCCCCcchHHHHHhhcCCCCccccc----cCCccChhhHHHHHHcCCC
Q 032068           13 SHCDRAIPSSNIDLHFAHCSRNLERCKV----CGDMVPRKYAEEHFLNTHA   59 (148)
Q Consensus        13 ~~C~~~~~~~~l~~H~~~~~~~~~~C~~----C~~~f~~~~l~~h~~~~h~   59 (148)
                      ..|...++..++..|+..|..+|+.|+.    |...-....+..|+...|+
T Consensus        11 ~GC~~~~~~~~~~~HE~~C~~~p~~C~~~~~~C~~~G~~~~l~~Hl~~~H~   61 (190)
T d1k2fa_          11 SGCEITLPHTEKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHK   61 (190)
T ss_dssp             GTCCCCCCGGGHHHHHHTCTTSCEECCSSSTTCCCEECHHHHHHHHHHSSC
T ss_pred             CCCCEeccccchhhHHhcCCCcccCCCCCCCCCccCCCHhHHHHHHHhcCC
Confidence            3688888878888898889999988853    6656666678888887775

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=80.74  E-value=0.33  Score=21.06  Aligned_cols=24  Identities=33%  Similarity=0.463  Sum_probs=20.6

Q ss_pred             CCCCcccCCCCCCCCC-cchHHHH-H
Q 032068            5 SDETTKICSHCDRAIP-SSNIDLH-F   28 (148)
Q Consensus         5 ~~~~~~~C~~C~~~~~-~~~l~~H-~   28 (148)
                      .++..|+|..|.+.+. .+++-.| .
T Consensus         4 Eg~~~yRC~~C~r~YTHISNFCRHyv   29 (37)
T d2drpa1           4 EGEHTYRCKVCSRVYTHISNFCRHYV   29 (37)
T ss_dssp             EETTEEECTTTCCEESSHHHHHHHHH
T ss_pred             ccCcEEEeehhhHHHHHHHHHHHHHH
Confidence            3566799999999999 9999999 5

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.18  E-value=0.39  Score=19.58  Aligned_cols=19  Identities=11%  Similarity=0.308  Sum_probs=13.2

Q ss_pred             ccchhccch-HHHHhhHhhc
Q 032068           64 SQCSETMER-EILAIHKGEN   82 (148)
Q Consensus        64 ~~C~~~~~~-~~l~~h~~~~   82 (148)
                      ..|.+.|.. +.++.|+.+|
T Consensus         7 kgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           7 KGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             TTCCCEESSHHHHHHHHGGG
T ss_pred             ccHHHHhhchHHHHHHhhcc
Confidence            467777766 7777777654