Citrus Sinensis ID: 032110

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------
Protein Sequence
MASNAAINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKWQI
Secondary Structure (PSIPRED)
cccccccccHHHccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHHcccEEEEEEEccccccccc
Secondary Structure Prediction (SSPRO)
cccccEEEEEEEEEcccccEEEEccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHHHHHccccEEEEEEEccccccccc
Coil and Loop (DISEMBL)
masnaaincsiidfssknhqliftslpiphcrygsstvrfRRNCFSlrasksyhspiiradssssssssssvkrepmlppynvlitgsTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLakgmkwqi
Flexible Loop (DISEMBL)
MASNAAINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLrasksyhspiiradssssssssssvkrepmlppyNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLReefgeqhvvqnvmlakgmkwqi
Low Complexity Region (SEG)
MASNAAINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLRASKSYHSPIIRADssssssssssVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKWQI
Disordered region (IsUnstruct)
*****AINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLRA******************************PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV**********FGEQHVVQNVML********
Disordered Region (DISOPRED)
*********SIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLRASKSYHSP************************YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKWQI
Disordered Region (DISEMBL)
MASNAAINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLRASKSYHSPI******************PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKWQI
Disordered Region (DISPRO)
**SNAAINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLRASKSYH***********************LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKWQI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASNAAINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKWQI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	147	2.2.26 [Sep-21-2011]
Q8LEU3	348	Chlorophyll(ide) b reduct	yes	no	0.707	0.298	0.580	1e-26
Q84ST4	343	Chlorophyll(ide) b reduct	yes	no	0.503	0.215	0.710	3e-25
Q93ZA0	496	Probable chlorophyll(ide)	no	no	0.346	0.102	0.568	7e-10
Q5N800	504	Probable chlorophyll(ide)	no	no	0.346	0.101	0.549	2e-08
P07914	249	Bile acid 7-dehydroxylase	N/A	no	0.346	0.204	0.431	2e-05
Q9BTZ2	278	Dehydrogenase/reductase S	no	no	0.462	0.244	0.391	2e-05
Q5RCF8	278	Dehydrogenase/reductase S	no	no	0.462	0.244	0.391	2e-05
Q13268	258	Dehydrogenase/reductase S	yes	no	0.408	0.232	0.383	2e-05
P39577	252	Uncharacterized oxidoredu	yes	no	0.285	0.166	0.547	3e-05
P19337	249	Bile acid 7-dehydroxylase	N/A	no	0.346	0.204	0.431	4e-05

>sp|Q8LEU3|NOL_ARATH Chlorophyll(ide) b reductase NOL, chloroplastic OS=Arabidopsis thaliana GN=NOL PE=2 SV=1

 Score =  118 bits (295), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/112 (58%), Positives = 75/112 (66%), Gaps = 8/112 (7%)

Query: 24  TSLPI--PHCRYGSSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPY 81
           T LP   P CR      R     F L         +    SS++  +  S KREPM PPY
Sbjct: 26  TKLPFLSPICRR-----RLLAERFGLATVVVTRQNLTVTPSSAAVEARISGKREPMTPPY 80

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           N+LITGSTKGIGYALA+EFLKAGDNV+ICSRSAERV++AVQSL+EEFGE HV
Sbjct: 81  NILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGE-HV 131

Required for chlorophyll b degradation. Chlorophyll b, chlorophyllide b, pheophorbide b and pheophytin b can be used as substrates.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 9EC: 4

>sp|Q84ST4|NOL_ORYSJ Chlorophyll(ide) b reductase NOL, chloroplastic OS=Oryza sativa subsp. japonica GN=NOL PE=1 SV=1

 Score =  114 bits (284), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 54/76 (71%), Positives = 63/76 (82%), Gaps = 2/76 (2%)

Query: 58  IRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117
           IRA++       +  +R  M+PPYNVLITGSTKGIGYALAKEFLKAGDNV+ICSRSAERV
Sbjct: 53  IRAEAVPGGGGVA--RRAAMVPPYNVLITGSTKGIGYALAKEFLKAGDNVVICSRSAERV 110

Query: 118 DSAVQSLREEFGEQHV 133
           +SAV  L++EFGEQHV
Sbjct: 111 ESAVTDLKKEFGEQHV 126

Required for chlorophyll b degradation.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 4

>sp|Q93ZA0|NYC1_ARATH Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Arabidopsis thaliana GN=NYC1 PE=1 SV=1

 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/51 (56%), Positives = 38/51 (74%)

Query: 80  PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
           P NV+ITGST+G+G ALA+EFL +GD VI+ SRS+E VD  V+ L +   E
Sbjct: 161 PRNVVITGSTRGLGKALAREFLLSGDRVIVTSRSSESVDMTVKELEQNLKE 211

Involved in chlorophyll b degradation.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 4

>sp|Q5N800|NYC1_ORYSJ Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Oryza sativa subsp. japonica GN=NYC1 PE=1 SV=1

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 35/51 (68%)

Query: 80  PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
           P NV+ITGST+G+G ALA+EFL +GD V+I SRS E V   +  L E   E
Sbjct: 170 PRNVVITGSTRGLGKALAREFLLSGDRVVIASRSPESVLQTINELEENIQE 220

Required for proper chloroplast degradation. Involved in chlorophyll b degradation.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 4

>sp|P07914|BAIA1_EUBSP Bile acid 7-dehydroxylase 1/3 OS=Eubacterium sp. (strain VPI 12708) GN=baiA1 PE=1 SV=3

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 34/51 (66%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
           +ITG T+GIG+A AK F++ G  V I   + E VD+A+  L+E + E+ V+
Sbjct: 10  IITGGTRGIGFAAAKLFIENGAKVSIFGETQEEVDTALAQLKELYPEEEVL 60

7-alpha-dehydroxylation of cholic acid and chenodeoxycholate, yielding deoxycholic acid and lithocholic acid, respectively. Highest affinity with taurochenodeoxycholic acid.

Eubacterium sp. (strain VPI 12708) (taxid: 29347)

EC: 1

EC: .

EC: 1

EC: 7

EC: .

EC: 9

EC: 9

EC: .

EC: 5

>sp|Q9BTZ2|DHRS4_HUMAN Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=3

 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%)

Query: 59  RADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118
           RA +S   +SS   +R+P L     L+T ST GIG+A+A+   + G +V++ SR  + VD
Sbjct: 12  RAWNSVRMASSGMTRRDP-LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVD 70

Query: 119 SAVQSLREE 127
            AV +L+ E
Sbjct: 71  QAVATLQGE 79

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q5RCF8|DHRS4_PONAB Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=3

 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%)

Query: 59  RADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118
           RA +S   +SS   +R+P L     L+T ST GIG+A+A+   + G +V++ SR  + VD
Sbjct: 12  RAWNSVRMASSGMTRRDP-LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVD 70

Query: 119 SAVQSLREE 127
            AV +L+ E
Sbjct: 71  QAVATLQGE 79

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q13268|DHRS2_HUMAN Dehydrogenase/reductase SDR family member 2 OS=Homo sapiens GN=DHRS2 PE=1 SV=3

 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 38/60 (63%)

Query: 68  SSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           SS+ + R+ +L     ++TGST GIG+A+A+   + G +V+I SR  + VD A+  L+ E
Sbjct: 2   SSTGIDRKGVLANRVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAKLQGE 61

Displays NADPH-dependent dicarbonyl reductase activity in vitro with 3,4-Hexanedione, 2,3-Heptanedione and 1-Phenyl-1,2-propanedione as substrates. No reductase activity is displayed in vitro with steroids, retinoids and sugars as substrates. May inhibit cell replication.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P39577|DLTE_BACSU Uncharacterized oxidoreductase DltE OS=Bacillus subtilis (strain 168) GN=dltE PE=3 SV=2

 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 27/42 (64%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
           VLITG + GIG  LAK  L+ G+ VIIC RS  R+  A Q L
Sbjct: 8   VLITGGSAGIGLELAKRLLELGNEVIICGRSEARLAEAKQQL 49

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P19337|BAIA2_EUBSP Bile acid 7-dehydroxylase 2 OS=Eubacterium sp. (strain VPI 12708) GN=baiA2 PE=2 SV=1

 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 33/51 (64%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
           +ITG T+GIG+A AK F+  G  V I   + E VD+A+  L+E + E+ V+
Sbjct: 10  IITGGTRGIGFAAAKIFIDNGAKVSIFGETQEEVDTALAQLKELYPEEEVL 60

7-alpha-dehydroxylation of cholic acid and chenodeoxycholate, yielding deoxycholic acid and lithocholic acid, respectively. Highest affinity with taurochenodeoxycholic acid.

Eubacterium sp. (strain VPI 12708) (taxid: 29347)

EC: 1

EC: .

EC: 1

EC: 7

EC: .

EC: 9

EC: 9

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
255546781	325	short-chain dehydrogenase, putative [Ric	0.462	0.209	0.897	9e-28
224097534	370	predicted protein [Populus trichocarpa]	0.551	0.218	0.685	6e-26
356556680	349	PREDICTED: chlorophyll(ide) b reductase	0.564	0.237	0.684	4e-25
10178029	341	unnamed protein product [Arabidopsis tha	0.707	0.304	0.580	8e-25
18414726	348	chlorophyll(ide) b reductase NOL [Arabid	0.707	0.298	0.580	9e-25
357115706	554	PREDICTED: chlorophyll(ide) b reductase	0.544	0.144	0.662	8e-24
449446317	352	PREDICTED: chlorophyll(ide) b reductase	0.414	0.173	0.836	9e-24
297806477	349	short-chain dehydrogenase/reductase fami	0.700	0.295	0.605	1e-23
75298085	343	RecName: Full=Chlorophyll(ide) b reducta	0.503	0.215	0.710	2e-23
108710161	556	myb-like DNA-binding domain, SHAQKYF cla	0.414	0.109	0.836	2e-23

>gi|255546781|ref|XP_002514449.1| short-chain dehydrogenase, putative [Ricinus communis] gi|223546445|gb|EEF47945.1| short-chain dehydrogenase, putative [Ricinus communis]

 Score =  128 bits (321), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 61/68 (89%), Positives = 65/68 (95%)

Query: 66  SSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR 125
           S SSSSV REPM+ PYNVLITGSTKGIGYALAKEFLKAGDNV+ICSRSAERV+SAVQ+LR
Sbjct: 58  SQSSSSVNREPMVSPYNVLITGSTKGIGYALAKEFLKAGDNVMICSRSAERVESAVQNLR 117

Query: 126 EEFGEQHV 133
           EEFGEQHV
Sbjct: 118 EEFGEQHV 125

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224097534|ref|XP_002310976.1| predicted protein [Populus trichocarpa] gi|222850796|gb|EEE88343.1| predicted protein [Populus trichocarpa]

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 61/89 (68%), Positives = 72/89 (80%), Gaps = 8/89 (8%)

Query: 64  SSSSSSSSVKREPMLPPYNVLITGSTK--------GIGYALAKEFLKAGDNVIICSRSAE 115
           + +SSSS++ REPMLPP+N+LITGSTK        GIGYALAKEFLKAGDNVIICSRSAE
Sbjct: 73  AQTSSSSALSREPMLPPFNILITGSTKELVDAFNPGIGYALAKEFLKAGDNVIICSRSAE 132

Query: 116 RVDSAVQSLREEFGEQHVVQNVMLAKGMK 144
           RV+SAVQSLREEFGEQ V  +++   G +
Sbjct: 133 RVESAVQSLREEFGEQRVWLSILHTSGYE 161

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556680|ref|XP_003546651.1| PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic-like [Glycine max]

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 63/92 (68%), Positives = 70/92 (76%), Gaps = 9/92 (9%)

Query: 43  NCFSLRAS-KSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFL 101
           N  S+ AS K+  SPI  A +S         K EPMLPP+NVLITGSTKGIGYALAKEFL
Sbjct: 49  NTLSVSASRKNSTSPIFLATASG--------KSEPMLPPFNVLITGSTKGIGYALAKEFL 100

Query: 102 KAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           KAGDNV+ICSRS ERV +AVQ+LR EFGEQHV
Sbjct: 101 KAGDNVLICSRSDERVKTAVQNLRVEFGEQHV 132

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|10178029|dbj|BAB11512.1| unnamed protein product [Arabidopsis thaliana]

 Score =  118 bits (296), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 65/112 (58%), Positives = 75/112 (66%), Gaps = 8/112 (7%)

Query: 24  TSLPI--PHCRYGSSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPY 81
           T LP   P CR      R     F L         +    SS++  +  S KREPM PPY
Sbjct: 26  TKLPFLSPICRR-----RLLAERFGLATVVVTRQNLTVTPSSAAVEARISGKREPMTPPY 80

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           N+LITGSTKGIGYALA+EFLKAGDNV+ICSRSAERV++AVQSL+EEFGE HV
Sbjct: 81  NILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGE-HV 131

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18414726|ref|NP_568145.1| chlorophyll(ide) b reductase NOL [Arabidopsis thaliana] gi|75301367|sp|Q8LEU3.1|NOL_ARATH RecName: Full=Chlorophyll(ide) b reductase NOL, chloroplastic; AltName: Full=Protein NON-YELLOW COLORING 1-LIKE; Short=AtNOL; Short=Protein NYC1-LIKE; AltName: Full=Short-chain dehydrogenase/reductase NOL; Flags: Precursor gi|21553369|gb|AAM62462.1| unknown [Arabidopsis thaliana] gi|94442407|gb|ABF18991.1| At5g04900 [Arabidopsis thaliana] gi|134254417|dbj|BAF49742.1| short-chain dehydrogenase/reductase AtNOL1 [Arabidopsis thaliana] gi|332003419|gb|AED90802.1| chlorophyll(ide) b reductase NOL [Arabidopsis thaliana]

 Score =  118 bits (295), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 65/112 (58%), Positives = 75/112 (66%), Gaps = 8/112 (7%)

Query: 24  TSLPI--PHCRYGSSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPY 81
           T LP   P CR      R     F L         +    SS++  +  S KREPM PPY
Sbjct: 26  TKLPFLSPICRR-----RLLAERFGLATVVVTRQNLTVTPSSAAVEARISGKREPMTPPY 80

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           N+LITGSTKGIGYALA+EFLKAGDNV+ICSRSAERV++AVQSL+EEFGE HV
Sbjct: 81  NILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGE-HV 131

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357115706|ref|XP_003559627.1| PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic-like [Brachypodium distachyon]

 Score =  115 bits (287), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 53/80 (66%), Positives = 63/80 (78%)

Query: 54  HSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS 113
           H  + R  + + S      +R+PM+PPYNVLITGSTKGIGYALAK+FL AGDNVIICSRS
Sbjct: 46  HRELARIQAEAISGGGGVARRDPMVPPYNVLITGSTKGIGYALAKKFLMAGDNVIICSRS 105

Query: 114 AERVDSAVQSLREEFGEQHV 133
           AERV+SA   L++EFGEQHV
Sbjct: 106 AERVESATNDLKKEFGEQHV 125

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446317|ref|XP_004140918.1| PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic-like [Cucumis sativus] gi|449494121|ref|XP_004159455.1| PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic-like [Cucumis sativus]

 Score =  114 bits (286), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 51/61 (83%), Positives = 59/61 (96%)

Query: 73  KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
           ++EPM+PPYNVLITGSTKGIGYALA++FLK GDNV+ICSRSAERV+S+VQSLREEFGEQ 
Sbjct: 75  QKEPMVPPYNVLITGSTKGIGYALARQFLKEGDNVVICSRSAERVESSVQSLREEFGEQR 134

Query: 133 V 133
           V
Sbjct: 135 V 135

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297806477|ref|XP_002871122.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297316959|gb|EFH47381.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/114 (60%), Positives = 78/114 (68%), Gaps = 11/114 (9%)

Query: 24  TSLPI--PHCRYGSSTVRFRRNCFSL-RASKSYHSPIIRADSSSSSSSSSSVKREPMLPP 80
           T LP   P CR    T RF      + R + S   P      S++  +  S KREPM PP
Sbjct: 26  TQLPFLSPLCRRRLLTERFGLATIVVTRQNLSVTPP------SAAMEARISGKREPMTPP 79

Query: 81  YNVLITGSTKG-IGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           YNVLITGSTKG IGYALA+EFLKAGDNV+ICSRSAERV+SAVQSL+EEFGE HV
Sbjct: 80  YNVLITGSTKGFIGYALAREFLKAGDNVVICSRSAERVESAVQSLKEEFGE-HV 132

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|75298085|sp|Q84ST4.1|NOL_ORYSJ RecName: Full=Chlorophyll(ide) b reductase NOL, chloroplastic; AltName: Full=Protein NON-YELLOW COLORING 1-LIKE; Short=OsNOL; Short=Protein NYC1-LIKE; AltName: Full=Short-chain dehydrogenase/reductase NOL; Flags: Precursor gi|29244639|gb|AAO73232.1| putative oxidoreductase protein [Oryza sativa Japonica Group] gi|50582763|gb|AAT78833.1| putative short chain dehydrogenase (having alternative splicing products) [Oryza sativa Japonica Group] gi|134254415|dbj|BAF49741.1| short-chain dehydrogenase/reductase NOL1 [Oryza sativa Japonica Group] gi|218193420|gb|EEC75847.1| hypothetical protein OsI_12846 [Oryza sativa Indica Group] gi|222625482|gb|EEE59614.1| hypothetical protein OsJ_11943 [Oryza sativa Japonica Group]

 Score =  114 bits (284), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/76 (71%), Positives = 63/76 (82%), Gaps = 2/76 (2%)

Query: 58  IRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117
           IRA++       +  +R  M+PPYNVLITGSTKGIGYALAKEFLKAGDNV+ICSRSAERV
Sbjct: 53  IRAEAVPGGGGVA--RRAAMVPPYNVLITGSTKGIGYALAKEFLKAGDNVVICSRSAERV 110

Query: 118 DSAVQSLREEFGEQHV 133
           +SAV  L++EFGEQHV
Sbjct: 111 ESAVTDLKKEFGEQHV 126

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|108710161|gb|ABF97956.1| myb-like DNA-binding domain, SHAQKYF class family protein, expressed [Oryza sativa Japonica Group]

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 51/61 (83%), Positives = 57/61 (93%)

Query: 73  KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
           +R  M+PPYNVLITGSTKGIGYALAKEFLKAGDNV+ICSRSAERV+SAV  L++EFGEQH
Sbjct: 66  RRAAMVPPYNVLITGSTKGIGYALAKEFLKAGDNVVICSRSAERVESAVTDLKKEFGEQH 125

Query: 133 V 133
           V
Sbjct: 126 V 126

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
TAIR|locus:2175254	348	NOL "NYC1-like" [Arabidopsis t	0.408	0.172	0.868	5.3e-24
UNIPROTKB|Q84ST4	343	NOL "Chlorophyll(ide) b reduct	0.414	0.177	0.836	3.8e-23
TAIR|locus:2119330	496	NYC1 "NON-YELLOW COLORING 1" [	0.346	0.102	0.568	2.9e-09
UNIPROTKB|Q5N800	504	NYC1 "Probable chlorophyll(ide	0.346	0.101	0.549	2.7e-08
WB|WBGene00000976	257	dhs-13 [Caenorhabditis elegans	0.333	0.190	0.530	3.9e-08
UNIPROTKB|B4DJS2	157	PECR "Peroxisomal trans-2-enoy	0.285	0.267	0.476	9e-06
UNIPROTKB|F5GWZ1	155	DHRS4 "Dehydrogenase/reductase	0.367	0.348	0.381	9e-06
UNIPROTKB|H7BYG2	170	DHRS4 "Dehydrogenase/reductase	0.367	0.317	0.381	9e-06
UNIPROTKB|J3QST2	140	DHRS4 "Dehydrogenase/reductase	0.367	0.385	0.381	9e-06
UNIPROTKB|E2QRI3	181	DHRS4 "Dehydrogenase/reductase	0.367	0.298	0.381	1.1e-05

TAIR|locus:2175254 NOL "NYC1-like" [Arabidopsis thaliana (taxid:3702)]

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 53/61 (86%), Positives = 59/61 (96%)

Query:    73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
             KREPM PPYN+LITGSTKGIGYALA+EFLKAGDNV+ICSRSAERV++AVQSL+EEFGE H
Sbjct:    72 KREPMTPPYNILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGE-H 130

Query:   133 V 133
             V
Sbjct:   131 V 131

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010304 "PSII associated light-harvesting complex II catabolic process" evidence=TAS

GO:0015996 "chlorophyll catabolic process" evidence=IDA

GO:0034256 "chlorophyll(ide) b reductase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q84ST4 NOL "Chlorophyll(ide) b reductase NOL, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 51/61 (83%), Positives = 57/61 (93%)

Query:    73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
             +R  M+PPYNVLITGSTKGIGYALAKEFLKAGDNV+ICSRSAERV+SAV  L++EFGEQH
Sbjct:    66 RRAAMVPPYNVLITGSTKGIGYALAKEFLKAGDNVVICSRSAERVESAVTDLKKEFGEQH 125

Query:   133 V 133
             V
Sbjct:   126 V 126

GO:0034256 "chlorophyll(ide) b reductase activity" evidence=IDA

TAIR|locus:2119330 NYC1 "NON-YELLOW COLORING 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 29/51 (56%), Positives = 38/51 (74%)

Query:    80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
             P NV+ITGST+G+G ALA+EFL +GD VI+ SRS+E VD  V+ L +   E
Sbjct:   161 PRNVVITGSTRGLGKALAREFLLSGDRVIVTSRSSESVDMTVKELEQNLKE 211

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IC

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010304 "PSII associated light-harvesting complex II catabolic process" evidence=IMP

GO:0015996 "chlorophyll catabolic process" evidence=IMP

GO:0034256 "chlorophyll(ide) b reductase activity" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q5N800 NYC1 "Probable chlorophyll(ide) b reductase NYC1, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 136 (52.9 bits), Expect = 2.7e-08, P = 2.7e-08
 Identities = 28/51 (54%), Positives = 35/51 (68%)

Query:    80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
             P NV+ITGST+G+G ALA+EFL +GD V+I SRS E V   +  L E   E
Sbjct:   170 PRNVVITGSTRGLGKALAREFLLSGDRVVIASRSPESVLQTINELEENIQE 220

GO:0009536 "plastid" evidence=IDA

GO:0010304 "PSII associated light-harvesting complex II catabolic process" evidence=IMP

GO:0015996 "chlorophyll catabolic process" evidence=IMP

GO:0016491 "oxidoreductase activity" evidence=IDA

GO:0042170 "plastid membrane" evidence=RCA

WB|WBGene00000976 dhs-13 [Caenorhabditis elegans (taxid:6239)]

 Score = 129 (50.5 bits), Expect = 3.9e-08, P = 3.9e-08
 Identities = 26/49 (53%), Positives = 35/49 (71%)

Query:    84 LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
             L+T STKGIG+A+AK+   AG +V++CSR  E VD AV +LR E  + H
Sbjct:    15 LVTASTKGIGFAIAKQLGAAGASVVVCSRKKENVDEAVAALRLENIDAH 63

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008667 "2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase activity" evidence=IEA

GO:0009239 "enterobactin biosynthetic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|B4DJS2 PECR "Peroxisomal trans-2-enoyl-CoA reductase" [Homo sapiens (taxid:9606)]

 Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
 Identities = 20/42 (47%), Positives = 27/42 (64%)

Query:    84 LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR 125
             ++TG   GIG A+ KE L+ G NV+I SR  ER+ SA   L+
Sbjct:    22 IVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQ 63

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|F5GWZ1 DHRS4 "Dehydrogenase/reductase SDR family member 4" [Homo sapiens (taxid:9606)]

 Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
 Identities = 21/55 (38%), Positives = 35/55 (63%)

Query:    73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
             +R+P+      L+T ST GIG+A+A+   + G +V++ SR  + VD AV +L+ E
Sbjct:    26 RRDPLANKV-ALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGE 79

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|H7BYG2 DHRS4 "Dehydrogenase/reductase SDR family member 4" [Homo sapiens (taxid:9606)]

 Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
 Identities = 21/55 (38%), Positives = 35/55 (63%)

Query:    73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
             +R+P+      L+T ST GIG+A+A+   + G +V++ SR  + VD AV +L+ E
Sbjct:     8 RRDPLANKV-ALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGE 61

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|J3QST2 DHRS4 "Dehydrogenase/reductase SDR family member 4" [Homo sapiens (taxid:9606)]

 Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
 Identities = 21/55 (38%), Positives = 35/55 (63%)

Query:    73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
             +R+P+      L+T ST GIG+A+A+   + G +V++ SR  + VD AV +L+ E
Sbjct:     8 RRDPLANKV-ALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGE 61

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|E2QRI3 DHRS4 "Dehydrogenase/reductase SDR family member 4" [Homo sapiens (taxid:9606)]

 Score = 103 (41.3 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 21/55 (38%), Positives = 35/55 (63%)

Query:    73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
             +R+P+      L+T ST GIG+A+A+   + G +V++ SR  + VD AV +L+ E
Sbjct:     8 RRDPLANKV-ALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGE 61

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q84ST4	NOL_ORYSJ	1, ., 1, ., 1, ., 2, 9, 4	0.7105	0.5034	0.2157	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	eugene3.00080117	hypothetical protein (370 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.X.5768.1	chlorophyllase (EC-3.1.1.14) (304 aa)						•			0.899
	estExt_fgenesh4_pg.C_LG_VI0825	SubName- Full=Putative uncharacterized protein; (372 aa)						•			0.899
	estExt_Genewise1_v1.C_LG_XVI3731	chlorophyll synthetase (EC-2.5.1.62) (329 aa)						•			0.899
	estExt_Genewise1_v1.C_LG_V5276	hypothetical protein (531 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	147
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	4e-12
cd05233	234	cd05233, SDR_c, classical (c) SDRs	5e-12
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	8e-12
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-11
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	4e-11
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	9e-11
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	2e-10
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	4e-10
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	5e-10
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	5e-10
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	7e-10
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	7e-10
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	1e-09
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	2e-09
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	2e-09
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	2e-09
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	2e-09
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	2e-09
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	3e-09
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	4e-09
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	5e-09
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	6e-09
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	1e-08
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	1e-08
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	4e-08
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	4e-08
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	4e-08
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	5e-08
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	7e-08
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	9e-08
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	1e-07
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-07
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	1e-07
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	1e-07
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	1e-07
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	2e-07
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	2e-07
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	2e-07
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	2e-07
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	2e-07
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	3e-07
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	3e-07
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	4e-07
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	4e-07
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-07
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	6e-07
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	6e-07
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	8e-07
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	1e-06
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	1e-06
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	1e-06
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	1e-06
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	2e-06
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	2e-06
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	4e-06
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	4e-06
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	5e-06
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	5e-06
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-06
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	8e-06
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	8e-06
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	9e-06
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-05
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-05
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	1e-05
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	1e-05
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	1e-05
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	1e-05
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	1e-05
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-05
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	2e-05
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	2e-05
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	2e-05
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-05
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	3e-05
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	3e-05
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	3e-05
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	3e-05
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	3e-05
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	4e-05
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	4e-05
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	5e-05
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-05
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-05
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	7e-05
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	9e-05
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	1e-04
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	1e-04
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	1e-04
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-04
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	1e-04
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	1e-04
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	1e-04
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-04
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-04
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	2e-04
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	2e-04
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	2e-04
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	2e-04
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	2e-04
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	2e-04
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	2e-04
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	3e-04
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	3e-04
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	3e-04
cd01078	194	cd01078, NAD_bind_H4MPT_DH, NADP binding domain of	3e-04
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	3e-04
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	4e-04
PLN00016	378	PLN00016, PLN00016, RNA-binding protein; Provision	4e-04
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	5e-04
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	5e-04
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	5e-04
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	6e-04
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	6e-04
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	6e-04
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	8e-04
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	8e-04
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	8e-04
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	8e-04
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	8e-04
TIGR01915	219	TIGR01915, npdG, NADPH-dependent F420 reductase	0.001
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	0.001
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	0.001
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	0.001
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	0.001
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	0.001
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	0.001
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	0.001
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	0.001
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.001
COG1090	297	COG1090, COG1090, Predicted nucleoside-diphosphate	0.001
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	0.002
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	0.002
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	0.002
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	0.002
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	0.002
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	0.002
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	0.002
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	0.002
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	0.002
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.002
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	0.003
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	0.003
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	0.003
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	0.003
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	0.003
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	0.004
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	0.004
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	0.004

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 60.8 bits (148), Expect = 4e-12
 Identities = 23/40 (57%), Positives = 29/40 (72%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ 122
           VLITG T GIG ALA++FL+AG+ VII  R  ER+  A +
Sbjct: 8   VLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKK 47

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 60.8 bits (148), Expect = 5e-12
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            L+TG++ GIG A+A+   + G  V++  R+ E +      +    G    VQ
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAA-IEALGGNAVAVQ 52

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 60.4 bits (147), Expect = 8e-12
 Identities = 17/54 (31%), Positives = 27/54 (50%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
             L+T ++ GIG A+A+   + G  V IC+R+ E ++ A   LR        V 
Sbjct: 3   VALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVV 56

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 59.0 bits (144), Expect = 2e-11
 Identities = 17/54 (31%), Positives = 27/54 (50%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
             L+TG+++GIG A+A      G  V+I   + E  ++    LR   GE  V+ 
Sbjct: 7   TALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLV 60

Length = 246

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 58.4 bits (142), Expect = 4e-11
 Identities = 20/51 (39%), Positives = 30/51 (58%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           V+ITG+  GIG   A+E  K G +VII  R+ E+ + A   +++E G   V
Sbjct: 4   VVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKV 54

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 57.6 bits (140), Expect = 9e-11
 Identities = 16/54 (29%), Positives = 32/54 (59%)

Query: 76  PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
             +     LITG++ GIG  LAK+  + G N+I+ +R  +++++  + L ++ G
Sbjct: 2   GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTG 55

Length = 265

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 56.1 bits (136), Expect = 2e-10
 Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 4/54 (7%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            VLITG++ GIG A A+ F KAG  +I+  R AER    +Q L +E G +  V+
Sbjct: 2   TVLITGASSGIGEATARRFAKAGAKLILTGRRAER----LQELADELGAKFPVK 51

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 55.7 bits (135), Expect = 4e-10
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
             ITG   GIG A+AK F + G +V I  R  E +++A + +    G
Sbjct: 6   AFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATG 52

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 55.3 bits (134), Expect = 5e-10
 Identities = 13/53 (24%), Positives = 23/53 (43%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            L+TG+ +GIG A+A      G  VI+     +   +  + +    G+    Q
Sbjct: 9   ALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQ 61

Length = 251

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 55.0 bits (133), Expect = 5e-10
 Identities = 17/45 (37%), Positives = 26/45 (57%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
            LITG +KGIG+A+A+  L  G  V I +R  + ++ A   L  +
Sbjct: 9   ALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK 53

Length = 237

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 55.1 bits (133), Expect = 7e-10
 Identities = 22/40 (55%), Positives = 27/40 (67%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ 122
           +LITG   GIG ALAK FL+ G+ VIIC R+ ER+  A  
Sbjct: 8   ILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKA 47

Length = 245

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 54.9 bits (133), Expect = 7e-10
 Identities = 17/46 (36%), Positives = 26/46 (56%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF 128
           VLITG + GIG ALA      G  VI  +R+ ++++S  + L +  
Sbjct: 3   VLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGELLNDNL 48

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 54.4 bits (131), Expect = 1e-09
 Identities = 24/54 (44%), Positives = 40/54 (74%), Gaps = 1/54 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
           NVL+T S++GIG+ +A+E LK G  V+I SR+ E ++ A++ L+ E+GE + V+
Sbjct: 2   NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELK-EYGEVYAVK 54

Length = 259

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 53.9 bits (130), Expect = 2e-09
 Identities = 21/51 (41%), Positives = 30/51 (58%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
            ++TG + GIG A  +  L+AG +V IC R  ER+ SA   LRE+F    +
Sbjct: 11  AVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARL 61

Length = 265

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 54.0 bits (130), Expect = 2e-09
 Identities = 18/44 (40%), Positives = 26/44 (59%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
            L+TG TKGIGYA+ +E    G  V  C+R+ + +D  +   RE
Sbjct: 9   ALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWRE 52

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 54.0 bits (130), Expect = 2e-09
 Identities = 25/50 (50%), Positives = 35/50 (70%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           LITG++KGIG A+A+EFL  G +V+I +R A+ +  A   L EEF E+ V
Sbjct: 13  LITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREV 62

Length = 257

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 53.4 bits (129), Expect = 2e-09
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
            L+TG+++GIG A+A +  K G  VII  RS+E      + + EE     V 
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSE---EGAEEVVEELKAYGVK 49

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 53.4 bits (129), Expect = 2e-09
 Identities = 22/50 (44%), Positives = 32/50 (64%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ 131
           NV++ G T GI   +A+ F +AG NV + SRS E+VD+AV  L++   E 
Sbjct: 11  NVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEG 60

Length = 264

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 53.3 bits (128), Expect = 3e-09
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSLREEFGEQHVV 134
            L     L+TG++ GIG A+A+   + G   V+   RS E    A+ +  +E G     
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAA 60

Length = 251

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 52.6 bits (127), Expect = 4e-09
 Identities = 24/45 (53%), Positives = 32/45 (71%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           VLITG + GIG ALAKE +K G NVII +RS  +++ AV+ +  E
Sbjct: 4   VLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAE 48

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 52.2 bits (126), Expect = 5e-09
 Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSLREE 127
             L+TG+ +GIG+ + ++  K+G   VI+ +R  ER  +AV+ LR E
Sbjct: 2   VALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAE 48

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 52.2 bits (126), Expect = 6e-09
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 19/73 (26%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSA-------------------ERVDSAVQS 123
           VL+TG T+GIG  +A+ FL AG  V++C R A                   ++V + V +
Sbjct: 9   VLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVDGRPAEFHAADVRDPDQVAALVDA 68

Query: 124 LREEFGEQHVVQN 136
           + E  G   V+ N
Sbjct: 69  IVERHGRLDVLVN 81

Length = 252

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 51.4 bits (123), Expect = 1e-08
 Identities = 16/44 (36%), Positives = 24/44 (54%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
            L+TG+++GIG A A+     G  V IC+R   R+ +A     E
Sbjct: 3   ALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELE 46

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 51.9 bits (125), Expect = 1e-08
 Identities = 20/54 (37%), Positives = 30/54 (55%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            VLITG++ GIG A A +  +AG  V + +R+ E +D  V  +R + G  H   
Sbjct: 373 VVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYT 426

Length = 657

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 50.2 bits (120), Expect = 4e-08
 Identities = 20/49 (40%), Positives = 32/49 (65%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
           L+TGS++GIGYALA+   +AG  VI+  R   ++ +A +SL+ +    H
Sbjct: 14  LVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAH 62

Length = 255

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 50.2 bits (120), Expect = 4e-08
 Identities = 19/44 (43%), Positives = 28/44 (63%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           L+TG+T GIG A+A+   K G  V +C+R  E + + V+ LRE 
Sbjct: 7   LVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREA 50

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 50.1 bits (120), Expect = 4e-08
 Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
           V+ITG + G+G A+AK F + G NV+I  R+ E+++ A   + E+F  Q + 
Sbjct: 4   VIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEI-EQFPGQVLT 54

Length = 252

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 50.1 bits (120), Expect = 5e-08
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           VL+TG   GIG A+A+ F +AG  V +C  S   + +    L  
Sbjct: 14  VLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPG 57

Length = 264

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 49.3 bits (118), Expect = 7e-08
 Identities = 16/42 (38%), Positives = 30/42 (71%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR 125
           L+TGS +G+G+ +A+    AG +V++  R+A  +++AV +LR
Sbjct: 15  LVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALR 56

Length = 256

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 49.0 bits (117), Expect = 9e-08
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
           VL+TG ++GIG  +A+ FL+AG  VII +R AE    A + L   +GE   +
Sbjct: 9   VLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEEL-SAYGECIAI 59

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAG-DNVIICSRS--AERVDSAVQSLREEFGEQHVVQ 135
           VLITG T G+G ALA+     G  ++++ SR   A      V  L     E  V  
Sbjct: 3   VLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAA 58

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 48.7 bits (117), Expect = 1e-07
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
            ++TG++ GIG  +A+ F   G  V++  R+ E  +     +   
Sbjct: 8   AIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAG 52

Length = 251

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 48.7 bits (117), Expect = 1e-07
 Identities = 14/45 (31%), Positives = 24/45 (53%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
            L+TG+  GIG  +A    K G  V+I   + E   +A ++L++ 
Sbjct: 7   ALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA 51

Length = 258

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 48.4 bits (116), Expect = 1e-07
 Identities = 17/50 (34%), Positives = 28/50 (56%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           +      LITG++ GIG A A  F KAG ++ + +RS + +++    LR 
Sbjct: 3   LNSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRS 52

Length = 241

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 48.4 bits (116), Expect = 1e-07
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 4/57 (7%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
            L     LITG++ GIG A A+   +AG  V++ +R  ER    +++L +E G    
Sbjct: 3   TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREER----LEALADEIGAGAA 55

Length = 246

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 48.5 bits (116), Expect = 2e-07
 Identities = 18/47 (38%), Positives = 29/47 (61%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
           VLITG++KGIG A A+ F   G ++ + +R A+ +++    LR   G
Sbjct: 10  VLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHG 56

Length = 259

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 48.1 bits (115), Expect = 2e-07
 Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 4/45 (8%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           VLITG++ GIG ALA+EF KAG NV + +R  +R+D     L+ E
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLD----ELKAE 41

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 48.0 bits (115), Expect = 2e-07
 Identities = 14/53 (26%), Positives = 22/53 (41%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            L+TG+ +G+G A A+   +AG  V      A        +L    G  H + 
Sbjct: 10  ALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIA 62

Length = 250

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 48.1 bits (115), Expect = 2e-07
 Identities = 24/73 (32%), Positives = 29/73 (39%), Gaps = 9/73 (12%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV--VQ-NVM 138
             +ITG   GIG A AK  LK G  V I  R+      A   L+    +     VQ +V 
Sbjct: 2   VAIITGGASGIGLATAKLLLKKGAKVAILDRNENP--GAAAELQAINPKVKATFVQCDVT 59

Query: 139 ----LAKGMKWQI 147
               LA   K  I
Sbjct: 60  SWEQLAAAFKKAI 72

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 47.7 bits (114), Expect = 2e-07
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
            L+TG+  GIG A+A+    AG NV++     E  ++A +   +  G 
Sbjct: 4   ALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGS 51

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 47.6 bits (114), Expect = 3e-07
 Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 4/52 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
            LITG T GIG   A++FL  G  V I  R    +++A    R E GE  +V
Sbjct: 9   ALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAA----RAELGESALV 56

Length = 249

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 47.6 bits (114), Expect = 3e-07
 Identities = 14/45 (31%), Positives = 24/45 (53%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           V+ITG++ GIG  LA    + G  +++ +R  ER++       E 
Sbjct: 6   VIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLEL 50

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 47.3 bits (113), Expect = 4e-07
 Identities = 18/43 (41%), Positives = 26/43 (60%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           L+ G + GIG ALA+ F   G  V I SRS +R+ +A ++L  
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG 43

Length = 230

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 47.1 bits (112), Expect = 4e-07
 Identities = 22/46 (47%), Positives = 30/46 (65%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           N+LITGS +GIG+ LA    + G  +II   +AER + AV  LR+E
Sbjct: 11  NILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE 56

Length = 254

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 46.8 bits (112), Expect = 5e-07
 Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVVQ 135
            L+TG+ +G+G A+A    +AG +V++      E  +  V+++         VQ
Sbjct: 9   ALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQ 62

Length = 249

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 46.8 bits (112), Expect = 6e-07
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 3/58 (5%)

Query: 76  PMLPPYN---VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
            ML P     V+ITG++ G+G A A+ F + G  V++ +R  E +++    +R   GE
Sbjct: 1   MMLKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGE 58

Length = 334

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 46.8 bits (112), Expect = 6e-07
 Identities = 15/53 (28%), Positives = 26/53 (49%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            L+TG+++GIG A+A      G  V +  RS E     V+ ++   G    ++
Sbjct: 3   ALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALE 55

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 46.3 bits (110), Expect = 8e-07
 Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 5/54 (9%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ-HVVQ 135
           VL+TG+T G G  + + F++ G  VI   R  ER    +Q L++E G+  ++ Q
Sbjct: 3   VLVTGATAGFGECITRRFIQQGHKVIATGRRQER----LQELKDELGDNLYIAQ 52

Length = 248

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 46.1 bits (110), Expect = 1e-06
 Identities = 20/49 (40%), Positives = 34/49 (69%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ 131
            ++TG+T GIG A A+E  K G NVI+ SR+ E++D+  + + E++G +
Sbjct: 4   AVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVE 52

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 46.1 bits (110), Expect = 1e-06
 Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 4/51 (7%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
            +LITG++ G+G  +A+EF   G ++ +C+R  +R++     L+ E   ++
Sbjct: 4   KILITGASSGLGAGMAREFAAKGRDLALCARRTDRLE----ELKAELLARY 50

Length = 248

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 46.0 bits (109), Expect = 1e-06
 Identities = 19/44 (43%), Positives = 29/44 (65%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           L+T ST GIG A+A+   + G +V++ SR  + VD AV +L+ E
Sbjct: 14  LVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGE 57

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 45.7 bits (109), Expect = 1e-06
 Identities = 21/52 (40%), Positives = 33/52 (63%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
           V+ITG+++GIG ALA    +AG  +++ +R+  R+ S  Q L +  GE  VV
Sbjct: 4   VIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVV 55

Length = 263

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 17/46 (36%), Positives = 31/46 (67%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
             L+TG+++GIG+ +A    +AG N++I SR+ E+ + A Q + +E
Sbjct: 7   VALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKE 52

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 18/44 (40%), Positives = 28/44 (63%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           LITG++ GIG+A+AK + KAG  ++    + E VD  + + RE 
Sbjct: 14  LITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL 57

Length = 265

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 44.6 bits (106), Expect = 4e-06
 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            L+TG T+G+G A+A+ F + G   ++IC R+AE+ ++    L     +   VQ
Sbjct: 9   ALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQ 62

Length = 260

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 44.6 bits (106), Expect = 4e-06
 Identities = 18/44 (40%), Positives = 27/44 (61%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           VL+TG+ +GIGYA+A+   +AG  V    R+ E++   V  LR 
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRR 44

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 44.1 bits (105), Expect = 5e-06
 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ-NVM 138
            +ITG    +G A+AKE  +AG  V I  R+ E+ ++ V  ++   GE   V+ +V+
Sbjct: 13  AVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVL 69

Length = 278

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 44.0 bits (104), Expect = 5e-06
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFG 129
           L+TGST GIG  +A+    AG N+++     A  +++    L  + G
Sbjct: 6   LVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHG 52

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 44.0 bits (105), Expect = 6e-06
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVVQ 135
             L+TG+++GIG A+A+     G NV+I  + S    ++ V  +    G+   VQ
Sbjct: 7   VALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQ 61

Length = 248

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 43.7 bits (103), Expect = 8e-06
 Identities = 16/44 (36%), Positives = 28/44 (63%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
             T S+KGIG+ +A+   +AG +VI+ SR+ E +  A + ++ E
Sbjct: 12  FTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSE 55

Length = 263

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 43.4 bits (103), Expect = 8e-06
 Identities = 19/51 (37%), Positives = 29/51 (56%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
           +ITG++ GIG A AK F + G  V++ +R    +D  V  +R E GE   +
Sbjct: 10  IITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVAL 60

Length = 254

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 43.4 bits (103), Expect = 9e-06
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 3/44 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           +LITG+ + IG ALA   L  G  VI+  R+      A+  LR+
Sbjct: 5   ILITGAGQRIGLALAWHLLAQGQPVIVSYRT-HY--PAIDGLRQ 45

Length = 236

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 43.1 bits (102), Expect = 1e-05
 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 27/82 (32%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-------------------------- 115
           N LITG+ +GIG A+A    K G NV + +R+ E                          
Sbjct: 9   NALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDY 68

Query: 116 -RVDSAVQSLREEFGEQHVVQN 136
             V +A++ L+ E G   ++ N
Sbjct: 69  EEVTAAIEQLKNELGSIDILIN 90

Length = 239

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 43.2 bits (102), Expect = 1e-05
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
            V I G ++G+GYA+A   LK G  V I SR+  ++    ++L  ++G  H V
Sbjct: 7   KVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLS-KYGNIHYV 58

Length = 238

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 43.1 bits (102), Expect = 1e-05
 Identities = 16/50 (32%), Positives = 30/50 (60%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ 131
             ++TG ++GIG A+A+   +AG +V I   SA R +   + L +++G +
Sbjct: 10  VAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVK 59

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 43.1 bits (102), Expect = 1e-05
 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 4/48 (8%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
            LITG   G+G AL + F+  G  V +  RSAE+    V  LR +FG+
Sbjct: 7   ALITGGGSGLGRALVERFVAEGAKVAVLDRSAEK----VAELRADFGD 50

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 1e-05
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 83  VLITGST-KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           VL+T +   GIG A A+  L+ G  V+I      R+      L  E G   V
Sbjct: 20  VLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRV 71

Length = 262

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 42.6 bits (101), Expect = 1e-05
 Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 4/52 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
            LITG   GIG AL + FL  G  V +  RSAE+    + SLR+ FG+  +V
Sbjct: 9   ALITGGGSGIGRALVERFLAEGARVAVLERSAEK----LASLRQRFGDHVLV 56

Length = 263

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 43.0 bits (102), Expect = 1e-05
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 18/74 (24%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS------------------AERVDSAVQSL 124
            L+TG TKGIG A     L+AG  V+  +RS                  AE   +  +++
Sbjct: 12  ALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLPEGVEFVAADLTTAEGCAAVARAV 71

Query: 125 REEFGEQHVVQNVM 138
            E  G   ++ +V+
Sbjct: 72  LERLGGVDILVHVL 85

Length = 260

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 42.8 bits (101), Expect = 1e-05
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
             LITG T+GIG A+A+ FL+ G  V +   SAE   +  + LRE+   
Sbjct: 9   VALITGGTRGIGRAIAEAFLREGAKVAVLYNSAE---NEAKELREKGVF 54

Length = 255

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 14/49 (28%), Positives = 23/49 (46%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
             +ITG T  +G A+A+   +AG  V    R+ E+ D   + +    G 
Sbjct: 7   VAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGR 55

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 17/54 (31%), Positives = 34/54 (62%), Gaps = 4/54 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ-HVVQ 135
           VL+TG+++G+G A+A+ F + G  V++    +   +SA +++  E GE+   +Q
Sbjct: 3   VLVTGASRGLGAAIARSFAREGARVVVNYYRST--ESA-EAVAAEAGERAIAIQ 53

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 42.2 bits (99), Expect = 2e-05
 Identities = 18/40 (45%), Positives = 23/40 (57%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ 122
           VLITG+T GIG  LA ++ K G  VI C R+   +D    
Sbjct: 4   VLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT 43

Length = 240

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 16/51 (31%), Positives = 32/51 (62%), Gaps = 3/51 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           VL+TG ++G+G A+A+ F + G  V++    +E    A ++L +E G++ +
Sbjct: 8   VLVTGGSRGLGAAIARAFAREGARVVVNYHQSE---DAAEALADELGDRAI 55

Length = 253

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 13/46 (28%), Positives = 24/46 (52%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
             L+TG+ +GIG A+A+ F + G  V +    A   + A  ++  +
Sbjct: 9   VALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARD 54

Length = 260

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 41.8 bits (99), Expect = 3e-05
 Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
            LITG+++GIG A+A+E L     +++  R AER+D     L
Sbjct: 6   ALITGASRGIGAAIARE-LAPTHTLLLGGRPAERLDELAAEL 46

Length = 227

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 41.6 bits (98), Expect = 3e-05
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 16/74 (21%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSA----------------ERVDSAVQSLRE 126
           VL+TG+TKGIG AL+      G  VI  +RSA                E+  + +  + E
Sbjct: 6   VLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDFPGELFACDLADIEQTAATLAQINE 65

Query: 127 EFGEQHVVQNVMLA 140
                 +V NV +A
Sbjct: 66  IHPVDAIVNNVGIA 79

Length = 234

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 41.9 bits (99), Expect = 3e-05
 Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            VL+TG++ GIG ALA+    AG  +++  R+AE++++    L   +  +H   
Sbjct: 7   RVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL--PYPGRHRWV 58

Length = 263

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 42.1 bits (100), Expect = 3e-05
 Identities = 16/55 (29%), Positives = 22/55 (40%), Gaps = 4/55 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNV 137
            L+TG+  GIG A AK     G  V++     E  ++A      E G       V
Sbjct: 425 ALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAA----AELGGPDRALGV 475

Length = 681

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 41.7 bits (98), Expect = 4e-05
 Identities = 16/52 (30%), Positives = 26/52 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
           V+ITG+  GIG   A+E  + G  VI+  R   + + A   +R +     V+
Sbjct: 4   VIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVI 55

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 41.6 bits (98), Expect = 4e-05
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVVQ 135
             L+TG++ GIG A+A     AG NV++  RS  +  +  V+ ++   G+   VQ
Sbjct: 5   VALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQ 59

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 41.2 bits (97), Expect = 5e-05
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLRE 126
            LP    L+TGS++GIG   AK    AG +V++  R  A R +  V  +  
Sbjct: 3   DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEA 53

Length = 248

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 41.1 bits (97), Expect = 6e-05
 Identities = 14/27 (51%), Positives = 16/27 (59%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVI 108
            VLITG+  GIG A A+ FL  G  V 
Sbjct: 7   TVLITGAASGIGLAQARAFLAQGAQVY 33

Length = 235

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 41.0 bits (97), Expect = 6e-05
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVVQ 135
            ++TG++ GIG A+A+   K G  V+I    + E     ++ ++EE G+   V+
Sbjct: 8   AIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVK 61

Length = 247

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 40.9 bits (96), Expect = 7e-05
 Identities = 15/51 (29%), Positives = 26/51 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
            L+TG   GIG  +A   + AG  V+I  R+ +++ +A + +    G   V
Sbjct: 10  YLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAV 60

Length = 276

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 40.3 bits (95), Expect = 9e-05
 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVVQ 135
            L+TG+ K IG A+A+     G  V++  +RS          L        +VQ
Sbjct: 3   ALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAVLVQ 56

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 20/48 (41%), Positives = 30/48 (62%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
           V+ITG++ GIG A A  F + G  V++ +RSAE +    + +RE  GE
Sbjct: 3   VVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGE 50

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 4/52 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
           VLI G+++GIG    +++   G  VI  +R A     A+ +L+    E   +
Sbjct: 4   VLIVGASRGIGREFVRQYRADGWRVIATARDAA----ALAALQALGAEALAL 51

Length = 222

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 14/32 (43%), Positives = 24/32 (75%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114
           V+ITG+++G+G A+A + L+ G +VI  SR+ 
Sbjct: 4   VIITGTSQGLGEAIANQLLEKGTHVISISRTE 35

Length = 251

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 18/40 (45%), Positives = 24/40 (60%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ 122
            L+TG+ KGIG A  K   KAG  V+  SR+   +DS V+
Sbjct: 10  ALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVR 49

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 4/48 (8%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ 131
            ITG+++G G A  +  L+ GD V+  +R    +      L E++G++
Sbjct: 7   FITGASRGFGRAWTEAALERGDRVVATARDTATLA----DLAEKYGDR 50

Length = 275

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 16/27 (59%), Positives = 17/27 (62%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII 109
           VLITG   GIG  LA EF K G  V+I
Sbjct: 2   VLITGGGSGIGRLLALEFAKRGAKVVI 28

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 17/51 (33%), Positives = 32/51 (62%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
           ++TG+ +G+G A+A  F +AG +V+I +R+  ++D   + +R      HVV
Sbjct: 14  VVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVV 64

Length = 263

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           VL+TG+  GIG A  + F +AGD V++    A+R     +   +  G  H 
Sbjct: 8   VLVTGAAGGIGRAACQRFARAGDQVVV----ADRNVERARERADSLGPDHH 54

Length = 520

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 39.8 bits (93), Expect = 2e-04
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 5/74 (6%)

Query: 65  SSSSSSSVKREPMLP-PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS 123
           S  +S++    P+   P  V ITG  +GIG A+A  F  AGD ++I  R AE      + 
Sbjct: 253 SGPASTAQAPSPLAESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAE----GAKK 308

Query: 124 LREEFGEQHVVQNV 137
           L E  G++H+    
Sbjct: 309 LAEALGDEHLSVQA 322

Length = 520

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVVQ 135
           VLITG+++GIG  L ++ L  G+N +I   R      + + +L       H+++
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAA-TELAALGASHSRLHILE 53

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 39.9 bits (94), Expect = 2e-04
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117
            ++ITG T  IG AL +    AG  V++ SR   + 
Sbjct: 1   KIVITGGTGFIGRALTRRLTAAGHEVVVLSRRPGKA 36

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 13/42 (30%), Positives = 15/42 (35%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
           V ITG  +GIG A A+     G  V I              L
Sbjct: 8   VAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL 49

Length = 273

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 80  PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ 131
               LI G+++G+G  L    L+ G  V    R  ++ D+A+Q+L     E+
Sbjct: 1   KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQ-DTALQALPGVHIEK 51

Length = 225

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 15/35 (42%), Positives = 18/35 (51%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117
           +LITG T  IG AL +   K G  V I +RS    
Sbjct: 1   ILITGGTGFIGRALTQRLTKRGHEVTILTRSPPPG 35

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 39.4 bits (92), Expect = 2e-04
 Identities = 12/44 (27%), Positives = 27/44 (61%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           L+TG++ GIG A+A+  ++ G  V+ C+R  +++++     +  
Sbjct: 10  LVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSA 53

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 39.3 bits (92), Expect = 2e-04
 Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 6/58 (10%)

Query: 84  LITGSTKGIGYALAKEFLKAGD-NVIICSRS-----AERVDSAVQSLREEFGEQHVVQ 135
           L+TG   GIG ALA+   +     +++  RS      E     + +L         + 
Sbjct: 209 LVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLYIS 266

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 39.1 bits (91), Expect = 3e-04
 Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 4/45 (8%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           V++TG ++GIG  + + F++ G  V+ C+R     ++A Q+L  E
Sbjct: 12  VIVTGGSRGIGRGIVRAFVENGAKVVFCARG----EAAGQALESE 52

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 14/46 (30%), Positives = 22/46 (47%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
           L+TG  +GIG  +A+    AG ++ I  R  +   +A Q      G
Sbjct: 6   LVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALG 51

Length = 256

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 38.8 bits (90), Expect = 3e-04
 Identities = 12/38 (31%), Positives = 26/38 (68%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA 120
           +L+TG+++G+G  +AK +  AG  VI+ +R  ++++  
Sbjct: 9   ILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKV 46

Length = 239

>gnl|CDD|133446 cd01078, NAD_bind_H4MPT_DH, NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

 Score = 38.5 bits (90), Expect = 3e-04
 Identities = 16/49 (32%), Positives = 22/49 (44%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
             ++ G T  +G   A    + G  V++  R  ER   A  SLR  FGE
Sbjct: 30  TAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGE 78

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 194

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 38.6 bits (91), Expect = 3e-04
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 4/57 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGD-NVIICSRS---AERVDSAVQSLREEFGEQHVVQ 135
            LITG   G+G ALA+   + G   +++ SRS   A    + +  L        VV 
Sbjct: 3   YLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVA 59

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 38.7 bits (90), Expect = 4e-04
 Identities = 14/51 (27%), Positives = 27/51 (52%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
             ++TG   GIG A+A    KAG +V+I    +E  ++   ++++  G+  
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAI 51

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|215029 PLN00016, PLN00016, RNA-binding protein; Provisional

 Score = 38.5 bits (90), Expect = 4e-04
 Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 9/104 (8%)

Query: 36  STVRFRRNCFSLRASKSYHSPIIRADSSSS-----SSSSSSVKREPMLPPYNVLI----T 86
           S+ R R +  S   S S  S I  A ++ +     +S  +       +    VLI    +
Sbjct: 3   SSSRLRSSSASSLLSSSSSSSISPALAARAQGSRRASQVAGAAAAAAVEKKKVLIVNTNS 62

Query: 87  GSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
           G    IG+ LAKE +KAG  V + +R  E      +     F E
Sbjct: 63  GGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSE 106

Length = 378

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 38.5 bits (90), Expect = 5e-04
 Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 29/83 (34%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-------------------------- 116
            +ITG+ +GIG A+A+     G N+++   + E                           
Sbjct: 5   AIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADVTDK 64

Query: 117 --VDSAVQSLREEFGEQHV-VQN 136
             V++ +    E+FG   V V N
Sbjct: 65  DDVEALIDQAVEKFGSFDVMVNN 87

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 38.5 bits (90), Expect = 5e-04
 Identities = 14/50 (28%), Positives = 24/50 (48%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
           +LITG+   IG A  K  L AG  +I+   +A  ++   + L   +  + 
Sbjct: 5   ILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRV 54

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 38.2 bits (89), Expect = 5e-04
 Identities = 18/52 (34%), Positives = 28/52 (53%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
           L+TG++ G+G   A+   +AG  V++ SR  ER+      +  E G  HVV 
Sbjct: 13  LVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVS 64

Length = 258

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 38.2 bits (89), Expect = 6e-04
 Identities = 19/52 (36%), Positives = 25/52 (48%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
           L+TG   GIG A A  F + G  V++  R A   +  V  +RE  GE   V 
Sbjct: 11  LVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVA 62

Length = 253

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 38.2 bits (89), Expect = 6e-04
 Identities = 16/44 (36%), Positives = 24/44 (54%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
            +ITGS+ GIG   A  F + G  + +  R AER++   QS  +
Sbjct: 6   AIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQ 49

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 38.0 bits (89), Expect = 6e-04
 Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 6/57 (10%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDN--VIICSRSAERVDSAVQSLREEFGEQHVVQNV 137
           +++TG+++GIG ALA+E LK G    V++ +RS E     +Q L+EE      V  V
Sbjct: 2   IILTGASRGIGRALAEELLKRGSPSVVVLLARSEE----PLQELKEELRPGLRVTTV 54

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 37.8 bits (88), Expect = 8e-04
 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 4/57 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII----CSRSAERVDSAVQSLREEFGEQHVVQ 135
           VLITG + G+G A+A      G +VI+      R     D+    +    G+   + 
Sbjct: 9   VLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLA 65

Length = 249

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 37.8 bits (88), Expect = 8e-04
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHVVQ 135
           V+ITG + G+G A+A  F K    V+I  RS E   +   + +++  GE   V+
Sbjct: 10  VVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVK 63

Length = 261

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 37.9 bits (89), Expect = 8e-04
 Identities = 14/27 (51%), Positives = 20/27 (74%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVI 108
            V +TG+ +GIGYA+A  F++AG  VI
Sbjct: 10  TVWVTGAAQGIGYAVALAFVEAGAKVI 36

Length = 252

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 37.8 bits (88), Expect = 8e-04
 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFG 129
           ++I+G T+GIG A+  EF ++G N+     S  E  +   + L +++G
Sbjct: 11  LVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYG 58

Length = 260

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 37.8 bits (88), Expect = 8e-04
 Identities = 13/36 (36%), Positives = 23/36 (63%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118
             +TG+++GIG A+A    KAG  V++ +++A   D
Sbjct: 6   AFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGD 41

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|233635 TIGR01915, npdG, NADPH-dependent F420 reductase

 Score = 37.5 bits (87), Expect = 0.001
 Identities = 17/51 (33%), Positives = 23/51 (45%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           + + G T   G  LA    KAG+ +II SR  E+ + A     EE G    
Sbjct: 3   IAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGS 53

This model represents a subset of a parent family described by pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase [Energy metabolism, Electron transport]. Length = 219

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 37.5 bits (87), Expect = 0.001
 Identities = 17/51 (33%), Positives = 28/51 (54%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
           L+TG++ GIG A A+     G  V I +R  +R+++    L  E G+  V+
Sbjct: 7   LVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVL 57

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 37.6 bits (88), Expect = 0.001
 Identities = 15/48 (31%), Positives = 27/48 (56%)

Query: 79  PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
            P  V ITG++ GIG ALA+E+ + G  + + +R  + + +    L +
Sbjct: 1   MPLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPK 48

Length = 257

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 37.3 bits (87), Expect = 0.001
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 18/72 (25%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICS------------------RSAERVDSAVQSL 124
           +++TG + GIG A+ KE L  G NV+                      SAE V+  V  +
Sbjct: 12  IIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQHENYQFVPTDVSSAEEVNHTVAEI 71

Query: 125 REEFGEQHVVQN 136
            E+FG    + N
Sbjct: 72  IEKFGRIDGLVN 83

Length = 266

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 37.4 bits (87), Expect = 0.001
 Identities = 17/45 (37%), Positives = 25/45 (55%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
            L+TG+  GIG ALA+ FL AGD V+     A  + +   +L + 
Sbjct: 5   ALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDA 49

Length = 257

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 37.5 bits (87), Expect = 0.001
 Identities = 19/36 (52%), Positives = 21/36 (58%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117
            VLITG + GIG ALA  F  AG  V   +R AE V
Sbjct: 3   VVLITGCSSGIGRALADAFKAAGYEVWATARKAEDV 38

Length = 274

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 37.2 bits (87), Expect = 0.001
 Identities = 14/41 (34%), Positives = 26/41 (63%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
           L+TG ++G+G  +A+   +AG  V++ +R AE ++ A   L
Sbjct: 16  LVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHL 56

Length = 259

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 37.3 bits (87), Expect = 0.001
 Identities = 15/47 (31%), Positives = 28/47 (59%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
           L+TG+++GIG A+AK   + G +VI+ SR  +   +   ++    G+
Sbjct: 12  LVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGK 58

Length = 252

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 37.2 bits (86), Expect = 0.001
 Identities = 18/51 (35%), Positives = 30/51 (58%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           ++ITG+  GIG+  A+ F   G +VI+  R+  R  +AV  + EE+ +  V
Sbjct: 4   IIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARV 54

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 36.9 bits (86), Expect = 0.001
 Identities = 12/48 (25%), Positives = 25/48 (52%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
           ++ITG  +G+G A+A+   + G  + +   + E+++ AV        E
Sbjct: 8   IVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTE 55

Length = 253

>gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

 Score = 37.2 bits (87), Expect = 0.001
 Identities = 14/37 (37%), Positives = 17/37 (45%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119
           +LITG T  IG AL     K G  V I +R   +   
Sbjct: 1   ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQ 37

Length = 297

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 36.8 bits (86), Expect = 0.002
 Identities = 16/41 (39%), Positives = 19/41 (46%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117
           M      LITG + G G ALA+  L AG  V+   RS    
Sbjct: 1   MSSMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAAR 41

Length = 277

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 36.6 bits (85), Expect = 0.002
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
            L+TG+++GIG  +A+   + G  V +  R+ E  D A  S    
Sbjct: 3   ALVTGASRGIGIEIARALARDGYRVSLGLRNPE--DLAALSASGG 45

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 36.9 bits (86), Expect = 0.002
 Identities = 14/51 (27%), Positives = 22/51 (43%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           VL+TG+T  I   + ++ LKAG  V    RS  +       L+       +
Sbjct: 2   VLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDRL 52

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 36.5 bits (85), Expect = 0.002
 Identities = 21/56 (37%), Positives = 30/56 (53%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
           ML    +LITG+   IG AL K  L+AG  VI      E ++  ++SL +EF  + 
Sbjct: 1   MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKK 56

Length = 256

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 36.3 bits (84), Expect = 0.002
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 4/55 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNV 137
            LI G+T GIG ALA+     G  +++  R A     A+  L  E G      +V
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRDA----GALAGLAAEVGALARPADV 51

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 36.6 bits (85), Expect = 0.002
 Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 5/62 (8%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDN-----VIICSRSAERVDSAVQSLREEFGEQHVVQNV 137
           VL+TG+  G+G A+ +  L   D      +I+  R+ +R ++A ++L     +  VV + 
Sbjct: 4   VLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVFDY 63

Query: 138 ML 139
           +L
Sbjct: 64  VL 65

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 36.6 bits (85), Expect = 0.002
 Identities = 15/52 (28%), Positives = 29/52 (55%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
           +L+TG++ GIG A A++F + G  V+  +R  + +D+    +    G+   V
Sbjct: 43  ILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAV 94

Length = 293

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 36.6 bits (85), Expect = 0.002
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVVQ-NV 137
            L+TGS++GIG A+A    + G D  +  +RS +  +   + +     +   V+ NV
Sbjct: 7   ALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANV 63

Length = 250

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 36.4 bits (85), Expect = 0.002
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR 125
            +LI G+T  I  A A+ +  AG  + + +R  ER++     LR
Sbjct: 3   KILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLR 46

Length = 243

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 36.2 bits (84), Expect = 0.002
 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVVQ 135
           V++TGS +GIG A+A    K G  V++   + AE ++  ++ ++E  GE   V 
Sbjct: 9   VVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVL 62

Length = 252

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 36.2 bits (84), Expect = 0.003
 Identities = 16/47 (34%), Positives = 28/47 (59%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
           L+TG+ +GIG+A+AK  ++ G  V I   + E   +A   L ++ G+
Sbjct: 6   LVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGK 52

Length = 256

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 36.5 bits (84), Expect = 0.003
 Identities = 12/44 (27%), Positives = 20/44 (45%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR 125
            +L+TG    IG  L +  L AG +V    R  + +D  +  + 
Sbjct: 2   RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVE 45

Length = 314

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 36.0 bits (83), Expect = 0.003
 Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVVQ 135
           VL+TG+++GIG A+A      G  + +         +S V +++ + G   ++Q
Sbjct: 1   VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQ 54

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 35.5 bits (82), Expect = 0.003
 Identities = 15/37 (40%), Positives = 23/37 (62%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119
           +LI G+T  IG ALA+E L+ G  V +  R+ +R+  
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLVRNTKRLSK 37

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 35.7 bits (83), Expect = 0.003
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVVQ 135
           L+TG+++GIG A+AK   + G +V++  + S    +  V  +    G+   VQ
Sbjct: 7   LVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGKAIAVQ 59

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 35.5 bits (82), Expect = 0.004
 Identities = 14/34 (41%), Positives = 22/34 (64%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAER 116
           + ITGS+ G+G A A+  L  G  V++ +RS +R
Sbjct: 10  IFITGSSDGLGLAAARTLLHQGHEVVLHARSQKR 43

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 35.5 bits (82), Expect = 0.004
 Identities = 14/33 (42%), Positives = 25/33 (75%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE 115
           + ITG+++GIG A+A +  + G NV+I +++AE
Sbjct: 6   LFITGASRGIGKAIALKAARDGANVVIAAKTAE 38

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 35.5 bits (82), Expect = 0.004
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           V++TG+ +GIG A+A+  L+AG  VI        +      LR  
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRLT 45

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	147
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.44
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.31
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.3
PRK08339	263	short chain dehydrogenase; Provisional	99.29
PRK05854	313	short chain dehydrogenase; Provisional	99.27
KOG0725	270	consensus Reductases with broad range of substrate	99.22
KOG1208	314	consensus Dehydrogenases with different specificit	99.19
PRK07062	265	short chain dehydrogenase; Provisional	99.19
PRK07063	260	short chain dehydrogenase; Provisional	99.17
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.17
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.16
PRK05867	253	short chain dehydrogenase; Provisional	99.16
PRK08862	227	short chain dehydrogenase; Provisional	99.15
PRK08303	305	short chain dehydrogenase; Provisional	99.15
PRK07478	254	short chain dehydrogenase; Provisional	99.15
PRK05876	275	short chain dehydrogenase; Provisional	99.14
PRK06197	306	short chain dehydrogenase; Provisional	99.14
PRK06139	330	short chain dehydrogenase; Provisional	99.13
PRK05866	293	short chain dehydrogenase; Provisional	99.13
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.13
PRK06125	259	short chain dehydrogenase; Provisional	99.12
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.11
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.11
PRK06194	287	hypothetical protein; Provisional	99.1
PRK08265	261	short chain dehydrogenase; Provisional	99.1
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.1
PRK08589	272	short chain dehydrogenase; Validated	99.1
PRK07109	334	short chain dehydrogenase; Provisional	99.09
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.09
PRK05872	296	short chain dehydrogenase; Provisional	99.09
PRK07035	252	short chain dehydrogenase; Provisional	99.08
PRK09186	256	flagellin modification protein A; Provisional	99.08
PLN02253	280	xanthoxin dehydrogenase	99.07
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.07
PRK09242	257	tropinone reductase; Provisional	99.07
PRK06720	169	hypothetical protein; Provisional	99.06
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.06
PRK07791	286	short chain dehydrogenase; Provisional	99.06
PRK07904	253	short chain dehydrogenase; Provisional	99.06
PRK06172	253	short chain dehydrogenase; Provisional	99.06
PRK07890	258	short chain dehydrogenase; Provisional	99.06
PRK07576	264	short chain dehydrogenase; Provisional	99.06
PRK06114	254	short chain dehydrogenase; Provisional	99.05
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.05
PLN02780	320	ketoreductase/ oxidoreductase	99.05
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.05
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.05
PRK05599	246	hypothetical protein; Provisional	99.05
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.04
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.04
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.04
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.04
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.04
PRK09072	263	short chain dehydrogenase; Provisional	99.03
PRK05717	255	oxidoreductase; Validated	99.03
PRK07102	243	short chain dehydrogenase; Provisional	99.03
PRK06138	252	short chain dehydrogenase; Provisional	99.02
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.01
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.01
PRK07814	263	short chain dehydrogenase; Provisional	99.01
PRK07825	273	short chain dehydrogenase; Provisional	99.01
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.01
PRK07774	250	short chain dehydrogenase; Provisional	99.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.0
PRK06196	315	oxidoreductase; Provisional	99.0
PRK07067	257	sorbitol dehydrogenase; Provisional	98.99
PRK06128	300	oxidoreductase; Provisional	98.99
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	98.99
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	98.99
PRK07831	262	short chain dehydrogenase; Provisional	98.99
PRK08628	258	short chain dehydrogenase; Provisional	98.98
PRK08251	248	short chain dehydrogenase; Provisional	98.98
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.98
PRK07677	252	short chain dehydrogenase; Provisional	98.98
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	98.97
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	98.97
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	98.97
PRK08703	239	short chain dehydrogenase; Provisional	98.97
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.97
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	98.97
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	98.96
PRK08213	259	gluconate 5-dehydrogenase; Provisional	98.96
PRK06701	290	short chain dehydrogenase; Provisional	98.95
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	98.95
PRK12939	250	short chain dehydrogenase; Provisional	98.95
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	98.95
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.95
PRK06914	280	short chain dehydrogenase; Provisional	98.94
PRK08278	273	short chain dehydrogenase; Provisional	98.94
PRK08643	256	acetoin reductase; Validated	98.94
PRK06949	258	short chain dehydrogenase; Provisional	98.94
PRK12747	252	short chain dehydrogenase; Provisional	98.92
PRK09135	249	pteridine reductase; Provisional	98.92
PRK07024	257	short chain dehydrogenase; Provisional	98.92
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	98.92
PRK05875	276	short chain dehydrogenase; Provisional	98.92
PRK06500	249	short chain dehydrogenase; Provisional	98.92
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	98.91
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.91
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	98.91
PRK08936	261	glucose-1-dehydrogenase; Provisional	98.91
PRK07832	272	short chain dehydrogenase; Provisional	98.91
PRK12746	254	short chain dehydrogenase; Provisional	98.91
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	98.91
PRK08340	259	glucose-1-dehydrogenase; Provisional	98.91
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	98.89
PRK07806	248	short chain dehydrogenase; Provisional	98.88
PRK07326	237	short chain dehydrogenase; Provisional	98.88
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	98.88
PRK12828	239	short chain dehydrogenase; Provisional	98.87
PRK08226	263	short chain dehydrogenase; Provisional	98.87
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	98.87
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	98.87
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.86
PRK07985	294	oxidoreductase; Provisional	98.86
PRK06484	520	short chain dehydrogenase; Validated	98.86
PRK06198	260	short chain dehydrogenase; Provisional	98.86
PRK07454	241	short chain dehydrogenase; Provisional	98.86
PRK12937	245	short chain dehydrogenase; Provisional	98.85
PRK07856	252	short chain dehydrogenase; Provisional	98.85
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	98.85
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.85
PRK06057	255	short chain dehydrogenase; Provisional	98.85
PRK06101	240	short chain dehydrogenase; Provisional	98.85
PRK08267	260	short chain dehydrogenase; Provisional	98.84
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	98.84
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	98.84
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	98.84
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.84
PRK07201	657	short chain dehydrogenase; Provisional	98.83
PRK05650	270	short chain dehydrogenase; Provisional	98.83
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	98.83
PRK06484	520	short chain dehydrogenase; Validated	98.83
PRK12938	246	acetyacetyl-CoA reductase; Provisional	98.83
PRK06398	258	aldose dehydrogenase; Validated	98.82
PRK12743	256	oxidoreductase; Provisional	98.81
PRK07775	274	short chain dehydrogenase; Provisional	98.81
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	98.81
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.81
PRK05855	582	short chain dehydrogenase; Validated	98.8
PRK06940	275	short chain dehydrogenase; Provisional	98.8
PRK06182	273	short chain dehydrogenase; Validated	98.8
PRK06180	277	short chain dehydrogenase; Provisional	98.79
PRK06841	255	short chain dehydrogenase; Provisional	98.79
PRK08263	275	short chain dehydrogenase; Provisional	98.79
PRK09291	257	short chain dehydrogenase; Provisional	98.79
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.79
PRK12935	247	acetoacetyl-CoA reductase; Provisional	98.78
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	98.78
PRK12744	257	short chain dehydrogenase; Provisional	98.78
PRK06181	263	short chain dehydrogenase; Provisional	98.77
PRK12829	264	short chain dehydrogenase; Provisional	98.77
PRK09134	258	short chain dehydrogenase; Provisional	98.77
TIGR02415	254	23BDH acetoin reductases. One member of this famil	98.77
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	98.76
PRK05993	277	short chain dehydrogenase; Provisional	98.76
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	98.76
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.76
PRK06523	260	short chain dehydrogenase; Provisional	98.75
PRK07074	257	short chain dehydrogenase; Provisional	98.75
PRK08264	238	short chain dehydrogenase; Validated	98.75
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	98.74
COG1028	251	FabG Dehydrogenases with different specificities (	98.74
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	98.74
PLN03209	576	translocon at the inner envelope of chloroplast su	98.74
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.73
PRK06924	251	short chain dehydrogenase; Provisional	98.72
PRK06483	236	dihydromonapterin reductase; Provisional	98.72
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.72
PRK12827	249	short chain dehydrogenase; Provisional	98.71
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	98.71
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	98.71
PRK12742	237	oxidoreductase; Provisional	98.71
PRK12367	245	short chain dehydrogenase; Provisional	98.7
PRK06123	248	short chain dehydrogenase; Provisional	98.7
PRK07060	245	short chain dehydrogenase; Provisional	98.69
PRK10538	248	malonic semialdehyde reductase; Provisional	98.68
PRK06947	248	glucose-1-dehydrogenase; Provisional	98.67
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	98.66
PRK06482	276	short chain dehydrogenase; Provisional	98.66
PRK06179	270	short chain dehydrogenase; Provisional	98.66
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	98.66
PRK07069	251	short chain dehydrogenase; Validated	98.65
PRK08324	681	short chain dehydrogenase; Validated	98.65
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	98.64
PRK05884	223	short chain dehydrogenase; Provisional	98.63
PLN00015	308	protochlorophyllide reductase	98.61
PRK05693	274	short chain dehydrogenase; Provisional	98.6
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	98.6
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	98.58
PRK07041	230	short chain dehydrogenase; Provisional	98.57
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	98.56
PRK12824	245	acetoacetyl-CoA reductase; Provisional	98.56
PRK07023	243	short chain dehydrogenase; Provisional	98.53
PLN02583	297	cinnamoyl-CoA reductase	98.53
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	98.5
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	98.49
PRK08177	225	short chain dehydrogenase; Provisional	98.49
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.49
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	98.49
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	98.46
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	98.45
PRK08017	256	oxidoreductase; Provisional	98.45
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	98.44
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.44
PRK08219	227	short chain dehydrogenase; Provisional	98.44
PRK06953	222	short chain dehydrogenase; Provisional	98.43
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	98.42
PLN02896	353	cinnamyl-alcohol dehydrogenase	98.42
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	98.41
PLN02240	352	UDP-glucose 4-epimerase	98.4
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	98.39
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	98.39
PLN02214	342	cinnamoyl-CoA reductase	98.38
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	98.38
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	98.37
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.37
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	98.36
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	98.36
PRK07577	234	short chain dehydrogenase; Provisional	98.35
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.34
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	98.34
PLN02686	367	cinnamoyl-CoA reductase	98.34
PLN02572	442	UDP-sulfoquinovose synthase	98.34
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	98.31
PRK08309	177	short chain dehydrogenase; Provisional	98.31
PLN02653	340	GDP-mannose 4,6-dehydratase	98.29
PLN00198	338	anthocyanidin reductase; Provisional	98.27
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	98.25
PLN02650	351	dihydroflavonol-4-reductase	98.24
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.23
KOG1611	249	consensus Predicted short chain-type dehydrogenase	98.22
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	98.21
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.19
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	98.18
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.18
PRK10675	338	UDP-galactose-4-epimerase; Provisional	98.12
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	98.11
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	98.11
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	98.08
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.07
PLN02427	386	UDP-apiose/xylose synthase	98.03
PRK09009	235	C factor cell-cell signaling protein; Provisional	97.94
PRK07578	199	short chain dehydrogenase; Provisional	97.89
PRK14982	340	acyl-ACP reductase; Provisional	97.85
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	97.84
CHL00194	317	ycf39 Ycf39; Provisional	97.83
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	97.82
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.78
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	97.77
TIGR01746	367	Thioester-redct thioester reductase domain. It has	97.73
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	97.71
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.7
PLN02778	298	3,5-epimerase/4-reductase	97.66
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	97.58
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.56
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.53
PLN02166	436	dTDP-glucose 4,6-dehydratase	97.53
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	97.52
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	97.5
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.48
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	97.47
PLN02206	442	UDP-glucuronate decarboxylase	97.45
PLN00016	378	RNA-binding protein; Provisional	97.44
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	97.43
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	97.43
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	97.42
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	97.4
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	97.38
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.37
PLN02695	370	GDP-D-mannose-3',5'-epimerase	97.35
PRK09620	229	hypothetical protein; Provisional	97.34
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	97.34
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	97.34
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	97.33
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.31
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	97.28
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.27
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.22
PLN02260	668	probable rhamnose biosynthetic enzyme	97.22
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.19
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.12
PRK07201	657	short chain dehydrogenase; Provisional	97.1
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	97.1
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.08
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.06
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	97.05
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.01
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	97.01
PRK05865	854	hypothetical protein; Provisional	96.99
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.88
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	96.87
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	96.84
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.83
PLN02503	605	fatty acyl-CoA reductase 2	96.83
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.81
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.76
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.72
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.69
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	96.66
PRK12320	699	hypothetical protein; Provisional	96.64
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.59
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	96.56
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	96.52
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.46
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	96.45
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.43
PLN02996	491	fatty acyl-CoA reductase	96.43
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.41
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	96.3
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.22
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.14
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	96.11
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.1
PLN02260	668	probable rhamnose biosynthetic enzyme	96.04
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.02
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.01
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.0
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.98
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.96
PRK06849	389	hypothetical protein; Provisional	95.96
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	95.92
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.91
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	95.91
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	95.88
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.85
COG4982	866	3-oxoacyl-[acyl-carrier protein]	95.82
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	95.82
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.82
KOG2733	423	consensus Uncharacterized membrane protein [Functi	95.81
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	95.81
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	95.77
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	95.71
PLN02494	477	adenosylhomocysteinase	95.68
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.67
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	95.66
COG0569	225	TrkA K+ transport systems, NAD-binding component [	95.66
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	95.65
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	95.63
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.62
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.58
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	95.56
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	95.52
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.48
PRK08655	437	prephenate dehydrogenase; Provisional	95.46
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	95.46
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	95.41
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.41
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	95.33
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	95.29
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.26
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	95.2
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	95.2
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	95.19
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.19
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.17
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	95.17
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	95.17
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.11
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	95.1
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	95.08
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.05
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.04
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	95.03
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	95.03
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	95.02
PTZ00075	476	Adenosylhomocysteinase; Provisional	95.01
PRK09496	453	trkA potassium transporter peripheral membrane com	94.99
PRK04148	134	hypothetical protein; Provisional	94.98
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	94.87
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	94.87
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	94.86
PLN00203	519	glutamyl-tRNA reductase	94.78
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	94.78
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.74
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.72
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	94.69
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.66
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	94.66
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	94.65
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	94.63
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	94.53
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.52
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	94.51
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.5
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	94.49
PRK12480	330	D-lactate dehydrogenase; Provisional	94.48
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	94.45
COG3320	382	Putative dehydrogenase domain of multifunctional n	94.44
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	94.41
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.4
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	94.35
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.3
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	94.26
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	94.25
TIGR02279	503	PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa	94.23
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	94.22
PRK06719	157	precorrin-2 dehydrogenase; Validated	94.19
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	94.15
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	94.14
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	94.11
PLN02928	347	oxidoreductase family protein	94.1
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	94.1
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	94.08
PRK13243	333	glyoxylate reductase; Reviewed	94.07
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	94.07
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.06
PRK08268	507	3-hydroxy-acyl-CoA dehydrogenase; Validated	94.01
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	94.01
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	93.99
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	93.97
COG5322	351	Predicted dehydrogenase [General function predicti	93.95
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.91
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	93.9
PRK08223	287	hypothetical protein; Validated	93.9
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	93.87
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	93.84
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.82
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	93.81
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	93.79
PRK10669	558	putative cation:proton antiport protein; Provision	93.78
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	93.72
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	93.71
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.71
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	93.68
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.67
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	93.67
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	93.65
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	93.64
PRK15116	268	sulfur acceptor protein CsdL; Provisional	93.63
cd01076	227	NAD_bind_1_Glu_DH NAD(P) binding domain of glutama	93.62
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.62
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	93.6
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.58
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	93.57
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	93.49
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	93.45
PRK09496	453	trkA potassium transporter peripheral membrane com	93.44
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	93.42
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	93.38
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	93.36
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	93.33
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.31
PRK06487	317	glycerate dehydrogenase; Provisional	93.3
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.29
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.27
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	93.26
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.25
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.25
PTZ00354	334	alcohol dehydrogenase; Provisional	93.23
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	93.22
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	93.15
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	93.13
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	93.13
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	93.12
PRK13771	334	putative alcohol dehydrogenase; Provisional	93.12
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	93.1
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	93.09
PLN02586	360	probable cinnamyl alcohol dehydrogenase	93.02
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	93.02
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.0
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.0
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	92.98
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	92.97
PLN02740	381	Alcohol dehydrogenase-like	92.97
PRK11730	715	fadB multifunctional fatty acid oxidation complex	92.96
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.9
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.87
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	92.87
PRK14968	188	putative methyltransferase; Provisional	92.87
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	92.83
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	92.8
TIGR02437	714	FadB fatty oxidation complex, alpha subunit FadB.	92.78
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	92.77
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	92.75
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	92.74
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	92.74
PRK14182	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.69
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	92.68
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	92.67
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	92.61
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	92.6
PRK13403	335	ketol-acid reductoisomerase; Provisional	92.55
PLN02178	375	cinnamyl-alcohol dehydrogenase	92.54
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	92.52
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	92.45
PTZ00079	454	NADP-specific glutamate dehydrogenase; Provisional	92.38
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	92.35
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	92.24
PRK14184	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.24
PLN02616	364	tetrahydrofolate dehydrogenase/cyclohydrolase, put	92.17
TIGR02441	737	fa_ox_alpha_mit fatty acid oxidation complex, alph	92.13
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	92.07
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	92.06
PRK07574	385	formate dehydrogenase; Provisional	91.99
COG2910	211	Putative NADH-flavin reductase [General function p	91.9
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	91.88
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	91.83
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	91.81

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.44  E-value=5.1e-13  Score=104.98  Aligned_cols=69  Identities=26%  Similarity=0.418  Sum_probs=63.8

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .+.+++++|||+++|||+++|+.|+++|++|++++|++++++++.++++.+++....++.+|+++..++
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~   71 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEAL   71 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHH
Confidence            467889999999999999999999999999999999999999999999999888888999999986543

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.31  E-value=5.3e-12  Score=97.64  Aligned_cols=65  Identities=25%  Similarity=0.401  Sum_probs=57.2

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+++|+++|||+++|||.++|++|+++|++|++.+|+.+++++++.++.+   .....+.+|++|..+
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~---~~~~~~~~DVtD~~~   67 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA---GAALALALDVTDRAA   67 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc---CceEEEeeccCCHHH
Confidence            45679999999999999999999999999999999999999988888764   446778899998654

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.30  E-value=4.3e-12  Score=100.50  Aligned_cols=72  Identities=29%  Similarity=0.358  Sum_probs=65.2

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCe-EEEEEcccCCCCCc
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ-HVVQNVMLAKGMKW  145 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~-~~~~~~dv~~~~~~  145 (147)
                      .+..+.+|+++|||+++|||.++|++|+.+|++++++.|..+++++..+++++..... .+++++|++|+.++
T Consensus         6 ~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~   78 (282)
T KOG1205|consen    6 FMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESV   78 (282)
T ss_pred             cHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHH
Confidence            3446889999999999999999999999999999999999999999999999887777 88899999997754

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.29  E-value=1.2e-11  Score=96.32  Aligned_cols=70  Identities=27%  Similarity=0.335  Sum_probs=59.8

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +++++|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++.+..+....++.+|++|+.++
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i   73 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDL   73 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHH
Confidence            3578999999999999999999999999999999999999888888777665454466789999987543

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.27  E-value=2.1e-11  Score=97.49  Aligned_cols=70  Identities=24%  Similarity=0.416  Sum_probs=60.2

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCC-eEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE-QHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~-~~~~~~~dv~~~~~  144 (147)
                      ..++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.+..++ ...++.+|++|..+
T Consensus         9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~s   79 (313)
T PRK05854          9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLAS   79 (313)
T ss_pred             CcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHH
Confidence            34678999999999999999999999999999999999999999888888776543 35677899988554

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.22  E-value=5.1e-11  Score=94.09  Aligned_cols=70  Identities=30%  Similarity=0.330  Sum_probs=59.8

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhC--CeEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG--EQHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~--~~~~~~~~dv~~~~~  144 (147)
                      ...+.||+++|||+++|||+++|++|++.|++|++++|+++.+++...++.....  .....+.+|++++.+
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   74 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVD   74 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHH
Confidence            4568999999999999999999999999999999999999999888888766433  346778899987654

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.19  E-value=6.6e-11  Score=95.34  Aligned_cols=72  Identities=26%  Similarity=0.340  Sum_probs=62.3

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCe-EEEEEcccCCCCCc
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ-HVVQNVMLAKGMKW  145 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~-~~~~~~dv~~~~~~  145 (147)
                      ...++.+++++|||+++|||+++|+.|+.+|++|++.+|+.+..+++++++.+...+. ..++++|+++..++
T Consensus        29 ~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV  101 (314)
T KOG1208|consen   29 HGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSV  101 (314)
T ss_pred             ccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHH
Confidence            4456788999999999999999999999999999999999999999999998855544 56679999985543

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.19  E-value=8.9e-11  Score=90.87  Aligned_cols=70  Identities=31%  Similarity=0.449  Sum_probs=59.6

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCC-eEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE-QHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~-~~~~~~~dv~~~~~~  145 (147)
                      .++++|+++||||++|||+++++.|+++|++|++++|+.+++++..+++.+.++. ....+.+|++|..++
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   74 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADV   74 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHH
Confidence            4578999999999999999999999999999999999999888888888766544 456778899886543

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.17  E-value=1.3e-10  Score=89.64  Aligned_cols=69  Identities=22%  Similarity=0.353  Sum_probs=57.9

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHH-hCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE-FGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~-~~~~~~~~~~dv~~~~~~  145 (147)
                      .+++|+++|||+++|||+++++.|+++|++|++++|+++.+++..+++... .+....++.+|++++.++
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~   73 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASV   73 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHH
Confidence            478899999999999999999999999999999999998888888877653 233456788999886543

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.17  E-value=1.6e-10  Score=92.07  Aligned_cols=64  Identities=30%  Similarity=0.496  Sum_probs=59.8

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      |+.++|||++.|||++.+++||++|.+|++++|++++++...+|+.++++..+.++..|.+++.
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~  112 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGD  112 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCc
Confidence            4799999999999999999999999999999999999999999999999977778889998765

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.16  E-value=1.3e-10  Score=90.06  Aligned_cols=70  Identities=20%  Similarity=0.369  Sum_probs=56.5

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ...+++|+++|||+++|||+++++.|+++|++|++++| +.+.+++..+++....+....++.+|++|..+
T Consensus         3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   73 (260)
T PRK08416          3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPET   73 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            34678999999999999999999999999999998864 56667777677765555556778899988654

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.16  E-value=1.3e-10  Score=89.42  Aligned_cols=68  Identities=24%  Similarity=0.349  Sum_probs=57.3

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +.+++|+++|||+++|||.++++.|+++|++|++++|+.+.+++..+++... +.....+.+|++++.+
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~   72 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS-GGKVVPVCCDVSQHQQ   72 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCeEEEEEccCCCHHH
Confidence            4578999999999999999999999999999999999998888887777654 3345677889887654

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.15  E-value=1.5e-10  Score=88.77  Aligned_cols=68  Identities=12%  Similarity=0.183  Sum_probs=57.7

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ++++|+++|||+++|||++++++|+++|++|++.+|+.+.+++..+++.+. +.....+.+|+++..++
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~-~~~~~~~~~D~~~~~~~   69 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL-TDNVYSFQLKDFSQESI   69 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCCeEEEEccCCCHHHH
Confidence            478899999999999999999999999999999999999998888777654 33456778898876543

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.15  E-value=1.6e-10  Score=92.40  Aligned_cols=69  Identities=23%  Similarity=0.296  Sum_probs=54.5

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh----------HHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA----------ERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~----------~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +.+++|+++||||++|||++++++|+++|++|++++|+.          +.+++..+++.. .+....++.+|++++.++
T Consensus         4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dv~~~~~v   82 (305)
T PRK08303          4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTA-AGGRGIAVQVDHLVPEQV   82 (305)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHh-cCCceEEEEcCCCCHHHH
Confidence            457899999999999999999999999999999999974          345555555543 344456788999886544

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.15  E-value=1.8e-10  Score=88.67  Aligned_cols=68  Identities=29%  Similarity=0.395  Sum_probs=56.7

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +++++|+++|||+++|||.++++.|+++|++|++++|+++++++..+++.+. +....++.+|+++..+
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   69 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE-GGEAVALAGDVRDEAY   69 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHH
Confidence            3567899999999999999999999999999999999998888887777654 3345677888887543

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.14  E-value=1.8e-10  Score=90.39  Aligned_cols=68  Identities=26%  Similarity=0.334  Sum_probs=57.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .+++|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++... +....++.+|++|..++
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~-~~~~~~~~~Dv~d~~~v   70 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE-GFDVHGVMCDVRHREEV   70 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEeCCCCCHHHH
Confidence            478999999999999999999999999999999999998888887777644 33456778999886543

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.14  E-value=2.8e-10  Score=90.31  Aligned_cols=71  Identities=18%  Similarity=0.298  Sum_probs=58.7

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhC-CeEEEEEcccCCCCC
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVVQNVMLAKGMK  144 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~-~~~~~~~~dv~~~~~  144 (147)
                      ..+++.+|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.+..+ ....++.+|++|..+
T Consensus        10 ~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~   81 (306)
T PRK06197         10 DIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLAS   81 (306)
T ss_pred             ccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHH
Confidence            34567899999999999999999999999999999999999888877777765443 235577899988654

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.13  E-value=2.2e-10  Score=92.58  Aligned_cols=69  Identities=25%  Similarity=0.377  Sum_probs=58.3

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +.+.+|+++|||+++|||+++++.|+++|++|++++|+++.+++..+++.+. +....++.+|++|..++
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~-g~~~~~~~~Dv~d~~~v   71 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL-GAEVLVVPTDVTDADQV   71 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEeeCCCHHHH
Confidence            3567899999999999999999999999999999999999998888877654 44456778899886543

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.13  E-value=3.8e-10  Score=89.46  Aligned_cols=69  Identities=23%  Similarity=0.369  Sum_probs=57.6

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ...+.+|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.+. +....++.+|++|..+
T Consensus        35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~-~~~~~~~~~Dl~d~~~  103 (293)
T PRK05866         35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA-GGDAMAVPCDLSDLDA  103 (293)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHH
Confidence            45578899999999999999999999999999999999998888877777554 3335577889887654

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.13  E-value=2.4e-10  Score=88.67  Aligned_cols=71  Identities=15%  Similarity=0.189  Sum_probs=53.0

Q ss_pred             CCCCCCCCCEEEEeCCc--ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           73 KREPMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        73 ~~~~~~~~k~~lVTG~s--~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .+.+.+++|+++|||++  +|||++++++|+++|++|++++|+.+.. +..+++.++.+. ..++.+|++|..++
T Consensus         3 ~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~-~~~~~~~~~~~~-~~~~~~D~~~~~~v   75 (258)
T PRK07533          3 QPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKAR-PYVEPLAEELDA-PIFLPLDVREPGQL   75 (258)
T ss_pred             CcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhH-HHHHHHHHhhcc-ceEEecCcCCHHHH
Confidence            45566889999999998  5999999999999999999999986432 233444444333 35678888886543

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.12  E-value=3.2e-10  Score=87.60  Aligned_cols=69  Identities=30%  Similarity=0.430  Sum_probs=59.2

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .+++|+++|||+++|||+++++.|+++|++|++++|+.+++++..+++.+..+....++.+|++++.++
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~   72 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAR   72 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHH
Confidence            468899999999999999999999999999999999999888887778766555566788999886543

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.11  E-value=1.7e-10  Score=91.47  Aligned_cols=70  Identities=21%  Similarity=0.313  Sum_probs=61.6

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +..+.+|++++||||++|+|+++|.+|+++|++++++|.+.+..++.++++++. | ......||+++.+++
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~-g-~~~~y~cdis~~eei  101 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI-G-EAKAYTCDISDREEI  101 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc-C-ceeEEEecCCCHHHH
Confidence            445788999999999999999999999999999999999999999998888876 4 567788999986654

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.11  E-value=3.7e-10  Score=86.89  Aligned_cols=69  Identities=35%  Similarity=0.466  Sum_probs=57.5

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+.+.+|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +.....+.+|+++...
T Consensus         4 ~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~   72 (254)
T PRK08085          4 LFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE-GIKAHAAPFNVTHKQE   72 (254)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc-CCeEEEEecCCCCHHH
Confidence            34578999999999999999999999999999999999998888877777654 3335567888887654

>PRK06194 hypothetical protein; Provisional

Probab=99.10  E-value=3.6e-10  Score=88.43  Aligned_cols=67  Identities=21%  Similarity=0.321  Sum_probs=55.8

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+.+|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +....++.+|++|..+
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~   69 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ-GAEVLGVRTDVSDAAQ   69 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-CCeEEEEECCCCCHHH
Confidence            467889999999999999999999999999999999988888777776543 3345667899988554

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.10  E-value=3.5e-10  Score=87.77  Aligned_cols=64  Identities=25%  Similarity=0.303  Sum_probs=51.7

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++++|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++    +....++.+|++++.+
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~   66 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL----GERARFIATDITDDAA   66 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCeeEEEEecCCCHHH
Confidence            467899999999999999999999999999999999987766554443    3335566788877543

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.10  E-value=4.5e-10  Score=86.44  Aligned_cols=68  Identities=31%  Similarity=0.442  Sum_probs=57.0

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .++++|+++|||+++|||++++++|+++|++|++.+|+++++++..+++... +....++.+|++++.+
T Consensus         6 ~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~-~~~~~~~~~D~~~~~~   73 (255)
T PRK07523          6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ-GLSAHALAFDVTDHDA   73 (255)
T ss_pred             cCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CceEEEEEccCCCHHH
Confidence            3578999999999999999999999999999999999998887777766543 3445677889988654

>PRK08589 short chain dehydrogenase; Validated

Probab=99.10  E-value=4.3e-10  Score=87.81  Aligned_cols=67  Identities=24%  Similarity=0.336  Sum_probs=55.4

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .+++|+++|||+++|||+++++.|+++|++|++++|+ +.+++..+++.+. +.....+.+|++++.++
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~   69 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN-GGKAKAYHVDISDEQQV   69 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc-CCeEEEEEeecCCHHHH
Confidence            3678999999999999999999999999999999999 7777777777543 34456778898886543

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.09  E-value=4.5e-10  Score=90.73  Aligned_cols=69  Identities=23%  Similarity=0.390  Sum_probs=58.6

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ..+++|+++|||+++|||+++++.|+++|++|++++|+++.+++..+++.+. +....++.+|++|..++
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~-g~~~~~v~~Dv~d~~~v   72 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA-GGEALAVVADVADAEAV   72 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc-CCcEEEEEecCCCHHHH
Confidence            3467899999999999999999999999999999999999888887777654 44466788999886544

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.09  E-value=3.8e-10  Score=87.76  Aligned_cols=67  Identities=25%  Similarity=0.324  Sum_probs=52.8

Q ss_pred             CCCCCEEEEeCCcC--hHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~--GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .+++|+++|||+++  |||+++++.|+++|++|++.+|++ ..++.++++.++.+.. .++.+|++|+.++
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~-~~~~~Dv~~~~~v   73 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGCN-FVSELDVTNPKSI   73 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCCc-eEEEccCCCHHHH
Confidence            46789999999997  999999999999999999999884 4455566666554433 4678999987654

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.09  E-value=3.8e-10  Score=89.36  Aligned_cols=68  Identities=16%  Similarity=0.241  Sum_probs=54.9

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ..++++|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++..  +.....+.+|++|..+
T Consensus         4 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~--~~~~~~~~~Dv~d~~~   71 (296)
T PRK05872          4 MTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG--DDRVLTVVADVTDLAA   71 (296)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC--CCcEEEEEecCCCHHH
Confidence            3457899999999999999999999999999999999999888777666532  2234456688887544

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.08  E-value=6.5e-10  Score=85.34  Aligned_cols=69  Identities=23%  Similarity=0.329  Sum_probs=57.2

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +++++|+++|||+++|||.++++.|+++|++|++++|+.+.+++..+++.+. +.....+.+|+.+..++
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~   72 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA-GGKAEALACHIGEMEQI   72 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHH
Confidence            4678899999999999999999999999999999999988888777777543 33455678888876543

>PRK09186 flagellin modification protein A; Provisional

Probab=99.08  E-value=4.5e-10  Score=86.16  Aligned_cols=68  Identities=29%  Similarity=0.372  Sum_probs=56.5

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCe-EEEEEcccCCCCCc
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ-HVVQNVMLAKGMKW  145 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~-~~~~~~dv~~~~~~  145 (147)
                      +++|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++....+.. ..++.+|++|..++
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~   70 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESL   70 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHH
Confidence            578999999999999999999999999999999999988888877776544333 44568999886543

>PLN02253 xanthoxin dehydrogenase

Probab=99.07  E-value=6.1e-10  Score=86.92  Aligned_cols=68  Identities=21%  Similarity=0.217  Sum_probs=53.4

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ...+++|+++||||++|||.+++++|+++|++|++++|+.+..++..+++..  +....++.+|++|..+
T Consensus        13 ~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~   80 (280)
T PLN02253         13 SQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG--EPNVCFFHCDVTVEDD   80 (280)
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC--CCceEEEEeecCCHHH
Confidence            4467899999999999999999999999999999999988776665555521  2235567788877543

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.07  E-value=5.4e-10  Score=87.87  Aligned_cols=67  Identities=21%  Similarity=0.383  Sum_probs=51.8

Q ss_pred             CCCCCEEEEeCCc--ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s--~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .+.+|+++||||+  +|||+++++.|+++|++|++++|+++ .++.++++.++.+.. ..+.+|++|..++
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v   70 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSD-YVYELDVSKPEHF   70 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCc-eEEEecCCCHHHH
Confidence            4678999999997  89999999999999999999999853 334445554444443 5678999886543

>PRK09242 tropinone reductase; Provisional

Probab=99.07  E-value=8.3e-10  Score=85.05  Aligned_cols=71  Identities=34%  Similarity=0.463  Sum_probs=58.8

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhC-CeEEEEEcccCCCCC
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVVQNVMLAKGMK  144 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~-~~~~~~~~dv~~~~~  144 (147)
                      ..+.+++|+++|||+++|||.++++.|+++|++|++++|+.+.+++..+++...++ .....+.+|++++.+
T Consensus         3 ~~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~   74 (257)
T PRK09242          3 HRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDED   74 (257)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHH
Confidence            34567899999999999999999999999999999999999888887777766532 345667889887654

>PRK06720 hypothetical protein; Provisional

Probab=99.06  E-value=8e-10  Score=81.62  Aligned_cols=68  Identities=22%  Similarity=0.257  Sum_probs=56.1

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +.+++|+++|||+++|||.++++.|+++|++|++++|+.+.+++..+++.+. +....++.+|+++..+
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~   79 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL-GGEALFVSYDMEKQGD   79 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHH
Confidence            4478999999999999999999999999999999999988887777777643 3334567889887543

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.06  E-value=8.1e-10  Score=84.98  Aligned_cols=71  Identities=27%  Similarity=0.427  Sum_probs=59.5

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +...+++|+++|||+++|||.++++.|+++|++|++++|+.+.+++..+++.+. +....++.+|++++.++
T Consensus         5 ~~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~   75 (256)
T PRK06124          5 QRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA-GGAAEALAFDIADEEAV   75 (256)
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc-CCceEEEEccCCCHHHH
Confidence            355688999999999999999999999999999999999998888877777653 44466789999886543

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.06  E-value=6.3e-10  Score=87.81  Aligned_cols=68  Identities=24%  Similarity=0.290  Sum_probs=55.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh---------HHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA---------ERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .+++|+++||||++|||+++++.|+++|++|++++++.         +.+++..+++.+. +....++.+|++|++++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dv~~~~~v   79 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA-GGEAVANGDDIADWDGA   79 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc-CCceEEEeCCCCCHHHH
Confidence            46789999999999999999999999999999998876         6677777777653 44456778899886543

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.06  E-value=6.1e-10  Score=86.33  Aligned_cols=66  Identities=21%  Similarity=0.333  Sum_probs=55.7

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHH-HHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAER-VDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~-~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++|+++||||++|||++++++|+++| ++|++++|+++. +++..+++.+..+....++.+|++|..+
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~   74 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDS   74 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHH
Confidence            56799999999999999999999995 999999999886 8888888776544356778999998664

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.06  E-value=8e-10  Score=84.88  Aligned_cols=68  Identities=25%  Similarity=0.403  Sum_probs=56.5

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +.+++|+++|||+++|||.+++++|+++|++|++++|+.+.+++..+++.+. +....++.+|+++..+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   70 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA-GGEALFVACDVTRDAE   70 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEcCCCCHHH
Confidence            3578899999999999999999999999999999999998888777776543 4445677888887543

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.06  E-value=7.6e-10  Score=84.99  Aligned_cols=67  Identities=24%  Similarity=0.433  Sum_probs=55.2

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+.+|+++||||++|||+++++.|+++|++|++++|+++.+++..+++... +.....+.+|++++..
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   68 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL-GRRALAVPTDITDEDQ   68 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh-CCceEEEecCCCCHHH
Confidence            367899999999999999999999999999999999998877776666543 3335677888887654

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.06  E-value=8.1e-10  Score=85.91  Aligned_cols=69  Identities=30%  Similarity=0.385  Sum_probs=56.9

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++.+++|+++|||+++|||.++++.|+++|++|++++|+.+.+++..+++..... ...++.+|++++.+
T Consensus         4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~   72 (264)
T PRK07576          4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGP-EGLGVSADVRDYAA   72 (264)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC-ceEEEECCCCCHHH
Confidence            3467899999999999999999999999999999999998887777666665433 34677899987554

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.05  E-value=9.2e-10  Score=84.87  Aligned_cols=70  Identities=16%  Similarity=0.239  Sum_probs=55.4

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH-HHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~-~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ++++++|+++|||+++|||++++++|+++|++|++++|+.+ .+++..+++... +.....+.+|++++.++
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i   73 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA-GRRAIQIAADVTSKADL   73 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc-CCceEEEEcCCCCHHHH
Confidence            34688999999999999999999999999999999999764 456666666544 33455778999886543

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.05  E-value=6.3e-10  Score=87.23  Aligned_cols=67  Identities=18%  Similarity=0.252  Sum_probs=51.1

Q ss_pred             CCCCCEEEEeCCcC--hHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~--GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .+++|+++|||+++  |||+++|++|+++|++|++.+|+.+..+ ..+++.++.+. ...+.+|++|..++
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~-~~~~~~~~~g~-~~~~~~Dv~d~~~v   72 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGK-RVKPLAESLGS-DFVLPCDVEDIASV   72 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHH-HHHHHHHhcCC-ceEEeCCCCCHHHH
Confidence            47899999999996  9999999999999999999999864333 33444444343 34678899886543

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.05  E-value=1.1e-09  Score=88.19  Aligned_cols=63  Identities=22%  Similarity=0.384  Sum_probs=54.9

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCC-eEEEEEcccCC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE-QHVVQNVMLAK  141 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~-~~~~~~~dv~~  141 (147)
                      .|++++||||++|||+++|++|+++|++|++++|+++++++..+++.+.++. ....+.+|+++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~  115 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG  115 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC
Confidence            4789999999999999999999999999999999999999988888776543 34566788875

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.05  E-value=9.8e-10  Score=84.47  Aligned_cols=67  Identities=19%  Similarity=0.331  Sum_probs=56.7

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+++|+++|||++++||..+++.|+++|++|++++|+++..++..+++.+. +....++.+|+++...
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~   70 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA-GGKAIGVAMDVTNEDA   70 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc-CceEEEEECCCCCHHH
Confidence            467899999999999999999999999999999999998888887777553 4445677899887554

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.05  E-value=9.8e-10  Score=85.69  Aligned_cols=68  Identities=25%  Similarity=0.336  Sum_probs=57.3

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +.+++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++... +.....+.+|++++.+
T Consensus         6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~   73 (278)
T PRK08277          6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA-GGEALAVKADVLDKES   73 (278)
T ss_pred             eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCCCCHHH
Confidence            3578999999999999999999999999999999999988888777777543 4446678899988654

>PRK05599 hypothetical protein; Provisional

Probab=99.05  E-value=6.9e-10  Score=85.57  Aligned_cols=64  Identities=20%  Similarity=0.247  Sum_probs=54.7

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      |+++|||+++|||+++++.|+ +|++|++++|+++++++..+++.+.++....++.+|++|..++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v   64 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTH   64 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHH
Confidence            478999999999999999999 5999999999999999888888765444456789999987654

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.04  E-value=8e-10  Score=85.53  Aligned_cols=63  Identities=35%  Similarity=0.442  Sum_probs=49.4

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      .+++|+++|||+++|||+++++.|+++|++|++++|+++.+++..+++    +....++.+|+++..
T Consensus         3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~   65 (263)
T PRK06200          3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF----GDHVLVVEGDVTSYA   65 (263)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCcceEEEccCCCHH
Confidence            467899999999999999999999999999999999987766544333    333455667776643

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.04  E-value=6.1e-10  Score=86.16  Aligned_cols=66  Identities=18%  Similarity=0.325  Sum_probs=49.5

Q ss_pred             CCCCCCEEEEeCCc--ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s--~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ..+++|+++|||++  +|||++++++|+++|++|++.+|+. +.++..+++.   +.....+.+|+++..++
T Consensus         3 ~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~---~~~~~~~~~Dl~~~~~v   70 (252)
T PRK06079          3 GILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV---DEEDLLVECDVASDESI   70 (252)
T ss_pred             cccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc---cCceeEEeCCCCCHHHH
Confidence            34789999999999  8999999999999999999999983 4444334432   22345677888775543

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.04  E-value=6.7e-10  Score=86.82  Aligned_cols=66  Identities=18%  Similarity=0.409  Sum_probs=52.2

Q ss_pred             CCCCEEEEeCCcC--hHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           78 LPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        78 ~~~k~~lVTG~s~--GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +++|+++|||+++  |||+++++.|+++|++|++.+|+ +++++.++++....+. ...+.+|++|..++
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~~-~~~~~~Dl~~~~~v   71 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGS-DIVLPCDVAEDASI   71 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccCC-ceEeecCCCCHHHH
Confidence            6889999999985  99999999999999999999987 3455556666655443 35678898886543

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.04  E-value=1.1e-09  Score=84.99  Aligned_cols=71  Identities=28%  Similarity=0.315  Sum_probs=58.9

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ..+++.+|+++|||+++|||.+++++|+++|++|++.+|+.+.+++..+++... +....++.+|+++..++
T Consensus         4 ~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~   74 (265)
T PRK07097          4 NLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL-GIEAHGYVCDVTDEDGV   74 (265)
T ss_pred             cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHH
Confidence            345788999999999999999999999999999999999998888777776543 43466778999886543

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.04  E-value=8.4e-10  Score=88.21  Aligned_cols=67  Identities=25%  Similarity=0.324  Sum_probs=55.0

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+.+|+++||||++|||+++++.|+++|++|++++|+.+++++..+++... +....++.+|+++..+
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~   69 (322)
T PRK07453          3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP-PDSYTIIHIDLGDLDS   69 (322)
T ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc-CCceEEEEecCCCHHH
Confidence            457899999999999999999999999999999999998888777776432 3335667888887554

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.03  E-value=1.1e-09  Score=84.82  Aligned_cols=66  Identities=29%  Similarity=0.427  Sum_probs=55.2

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+++|+++||||++|||.++++.|+++|++|++++|+++.+++...++  ..+....++.+|++|..+
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~d~~~   67 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL--PYPGRHRWVVADLTSEAG   67 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH--hcCCceEEEEccCCCHHH
Confidence            457889999999999999999999999999999999998887776666  234456677889988654

>PRK05717 oxidoreductase; Validated

Probab=99.03  E-value=1e-09  Score=84.59  Aligned_cols=66  Identities=24%  Similarity=0.348  Sum_probs=50.1

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      +.+.++||+++|||+++|||.++++.|+++|++|++++|+.++.++..+++    +....++.+|+++..
T Consensus         4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~   69 (255)
T PRK05717          4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL----GENAWFIAMDVADEA   69 (255)
T ss_pred             CCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc----CCceEEEEccCCCHH
Confidence            456788999999999999999999999999999999999876555433322    223445566666543

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.03  E-value=1.3e-09  Score=83.32  Aligned_cols=65  Identities=22%  Similarity=0.333  Sum_probs=55.8

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      |+++||||++|||.+++++|+++|++|++++|+++..++..+++....+....++.+|++++.++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~   66 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASH   66 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHH
Confidence            58999999999999999999999999999999998888777777665555567889999987653

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.02  E-value=1.3e-09  Score=83.32  Aligned_cols=66  Identities=24%  Similarity=0.378  Sum_probs=54.2

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++++|+++|||+++|||.++++.|+++|++|++++|+.+..++..+++.  .+....++.+|++|..+
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~   67 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA--AGGRAFARQGDVGSAEA   67 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh--cCCeEEEEEcCCCCHHH
Confidence            4678999999999999999999999999999999999887776666554  24445677888887543

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.01  E-value=1.1e-09  Score=85.27  Aligned_cols=67  Identities=21%  Similarity=0.340  Sum_probs=51.6

Q ss_pred             CCCCCEEEEeCC--cChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~--s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .+++|+++||||  ++|||+++|++|+++|++|++.+|++ +.++.++++..+.+. ...+.+|++|.+++
T Consensus         3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~Dv~~~~~v   71 (261)
T PRK08690          3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDS-ELVFRCDVASDDEI   71 (261)
T ss_pred             ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCC-ceEEECCCCCHHHH
Confidence            378899999996  78999999999999999999988763 444555566555444 34678898886554

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.01  E-value=1.3e-09  Score=83.08  Aligned_cols=67  Identities=19%  Similarity=0.376  Sum_probs=54.8

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ++++|+++|||+++|||.++++.|+++|++|++++|+.+..++...++..  +....++.+|+.+..++
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~   68 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA--GGRAIAVAADVSDEADV   68 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--CCeEEEEECCCCCHHHH
Confidence            46788999999999999999999999999999999999887776666543  34456778888876543

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.01  E-value=1.6e-09  Score=84.01  Aligned_cols=67  Identities=28%  Similarity=0.471  Sum_probs=56.0

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+++|+++|||+++|||.++++.|+++|++|++++|+.+.+++..+++... +....++.+|++++..
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~   73 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA-GRRAHVVAADLAHPEA   73 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHH
Confidence            467899999999999999999999999999999999988887777776543 3345677888887654

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.01  E-value=1e-09  Score=85.32  Aligned_cols=63  Identities=24%  Similarity=0.225  Sum_probs=49.7

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+++|+++||||++|||.++++.|+++|++|++.+|+++.+++..+++.     ...++.+|+++..+
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~   64 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG-----LVVGGPLDVTDPAS   64 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-----cceEEEccCCCHHH
Confidence            4678899999999999999999999999999999999887766544442     23455677766443

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.01  E-value=1e-09  Score=85.24  Aligned_cols=69  Identities=13%  Similarity=0.301  Sum_probs=49.8

Q ss_pred             CCCCCCEEEEeCCc--ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHh-CCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF-GEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s--~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~~~dv~~~~~~  145 (147)
                      +++.+|+++|||++  +|||++++++|+++|++|++.+|+... ++..+++.++. +.....+.+|++|+.++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v   74 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERL-EKEVRELADTLEGQESLLLPCDVTSDEEI   74 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc-hHHHHHHHHHcCCCceEEEecCCCCHHHH
Confidence            45789999999997  899999999999999999999875321 12223333332 23355678898886543

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.00  E-value=1.9e-09  Score=82.44  Aligned_cols=68  Identities=19%  Similarity=0.343  Sum_probs=55.2

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +.+++|+++|||+++|||.++++.|+++|++|++++|+++..++..+++... +.....+.+|+++..+
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~   69 (250)
T PRK07774          2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD-GGTAIAVQVDVSDPDS   69 (250)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHH
Confidence            3467899999999999999999999999999999999987777766666543 3334567889887653

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.00  E-value=1.4e-09  Score=83.92  Aligned_cols=67  Identities=18%  Similarity=0.232  Sum_probs=50.4

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +++++|+++||||++|||++++++|+++|++|++++|+..  ++..+++.+ .+....++.+|++++.++
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~-~~~~~~~~~~Dl~~~~~~   70 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEA-LGRKFHFITADLIQQKDI   70 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHH-cCCeEEEEEeCCCCHHHH
Confidence            3578999999999999999999999999999999988642  233333332 344456678888876543

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.00  E-value=1.2e-09  Score=84.61  Aligned_cols=62  Identities=24%  Similarity=0.319  Sum_probs=47.2

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      .+++|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+    ..+.....+.+|+.+.
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~----~~~~~~~~~~~D~~~~   63 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEA----AHGDAVVGVEGDVRSL   63 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----hcCCceEEEEeccCCH
Confidence            4678999999999999999999999999999999998766554322    2233344556666653

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06196 oxidoreductase; Provisional

Probab=99.00  E-value=1.3e-09  Score=86.89  Aligned_cols=63  Identities=22%  Similarity=0.299  Sum_probs=50.5

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      .++++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++..     ..++.+|++|..
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~-----v~~~~~Dl~d~~   84 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDG-----VEVVMLDLADLE   84 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhh-----CeEEEccCCCHH
Confidence            346789999999999999999999999999999999998877666555421     345567776644

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=98.99  E-value=1.8e-09  Score=83.23  Aligned_cols=64  Identities=25%  Similarity=0.394  Sum_probs=51.8

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+.+|+++|||+++|||.++++.|+++|++|++++|+.+..++..+++    +....++.+|++++.+
T Consensus         3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~   66 (257)
T PRK07067          3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI----GPAAIAVSLDVTRQDS   66 (257)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh----CCceEEEEccCCCHHH
Confidence            467899999999999999999999999999999999988776655444    2235566788877544

>PRK06128 oxidoreductase; Provisional

Probab=98.99  E-value=7.7e-09  Score=81.98  Aligned_cols=69  Identities=26%  Similarity=0.269  Sum_probs=51.3

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH--HHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE--RVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~--~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ...+++|+++||||++|||+++++.|+++|++|++.+++.+  ..++..+++.. .+....++.+|+++..+
T Consensus        50 ~~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~  120 (300)
T PRK06128         50 FGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQA-EGRKAVALPGDLKDEAF  120 (300)
T ss_pred             ccccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHH-cCCeEEEEecCCCCHHH
Confidence            33578999999999999999999999999999999887543  33444444443 34445667788877543

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=98.99  E-value=1.8e-09  Score=83.29  Aligned_cols=68  Identities=24%  Similarity=0.294  Sum_probs=53.3

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ..+++|+++|||+++|||.++++.|+++|++|++++|+ +..++..+++.+ .+....++.+|++++.++
T Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~i   78 (258)
T PRK06935         11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEK-EGRKVTFVQVDLTKPESA   78 (258)
T ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHh-cCCceEEEEcCCCCHHHH
Confidence            35789999999999999999999999999999999998 555555454443 344456778888876543

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=98.99  E-value=2.2e-09  Score=82.69  Aligned_cols=68  Identities=24%  Similarity=0.353  Sum_probs=56.7

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +.+++|+++|||+++|||.++++.|+++|++|++++|+.+..++..+++... +....++.+|+++..+
T Consensus         7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~   74 (255)
T PRK06113          7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-GGQAFACRCDITSEQE   74 (255)
T ss_pred             cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHH
Confidence            3578999999999999999999999999999999999988888777777543 3345677899987654

>PRK07831 short chain dehydrogenase; Provisional

Probab=98.99  E-value=3.5e-09  Score=81.89  Aligned_cols=68  Identities=25%  Similarity=0.357  Sum_probs=56.7

Q ss_pred             CCCCCEEEEeCCcC-hHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhC-CeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTK-GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~-GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~-~~~~~~~~dv~~~~~  144 (147)
                      .+.+|+++|||+++ |||+++++.|+++|++|++.+|+.+++++..+++.+.++ ....++.+|++++.+
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~   83 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQ   83 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHH
Confidence            45689999999985 999999999999999999999999888888777776555 345677899987643

>PRK08628 short chain dehydrogenase; Provisional

Probab=98.98  E-value=1.8e-09  Score=83.18  Aligned_cols=67  Identities=25%  Similarity=0.289  Sum_probs=54.6

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .++++|+++|||+++|||+++++.|+++|++|++++|+++.. +..+++.+. +....++.+|+++..+
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~-~~~~~~~~~D~~~~~~   69 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL-QPRAEFVQVDLTDDAQ   69 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc-CCceEEEEccCCCHHH
Confidence            468899999999999999999999999999999999988766 555666544 3335677888887553

>PRK08251 short chain dehydrogenase; Provisional

Probab=98.98  E-value=2.3e-09  Score=81.93  Aligned_cols=65  Identities=25%  Similarity=0.527  Sum_probs=54.9

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHh-CCeEEEEEcccCCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF-GEQHVVQNVMLAKGMK  144 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~~~dv~~~~~  144 (147)
                      +|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++.... +....++.+|+++..+
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   67 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQ   67 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHH
Confidence            5789999999999999999999999999999999988887777776554 3346677899998654

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.98  E-value=3e-09  Score=80.99  Aligned_cols=67  Identities=28%  Similarity=0.423  Sum_probs=55.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++++|+++|||+++|||..++++|+++|++|++++|+.+..++...++.. .+....++.+|+++..+
T Consensus         4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~   70 (239)
T PRK07666          4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEA-YGVKVVIATADVSDYEE   70 (239)
T ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-hCCeEEEEECCCCCHHH
Confidence            35678999999999999999999999999999999998888777777643 34456677888887543

>PRK07677 short chain dehydrogenase; Provisional

Probab=98.98  E-value=2e-09  Score=82.81  Aligned_cols=65  Identities=28%  Similarity=0.412  Sum_probs=54.1

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++.+. +....++.+|++++.++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~   65 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF-PGQVLTVQMDVRNPEDV   65 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHH
Confidence            579999999999999999999999999999999988887776666543 34466788999886543

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=98.97  E-value=2.5e-09  Score=81.86  Aligned_cols=66  Identities=24%  Similarity=0.383  Sum_probs=55.4

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +++|+++|||++++||.+++++|+++|++|++++|+.+..++...++... +....++.+|++++.+
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~   67 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA-GGKAIGVAMDVTDEEA   67 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHH
Confidence            56789999999999999999999999999999999998888777776553 3345677889887654

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=98.97  E-value=1.8e-09  Score=83.87  Aligned_cols=68  Identities=21%  Similarity=0.307  Sum_probs=51.0

Q ss_pred             CCCCCEEEEeCCc--ChHHHHHHHHHHHCCCEEEEEeCChH--HHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAE--RVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s--~GIG~~~a~~La~~Ga~V~i~~r~~~--~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .+++|+++|||++  +|||++++++|+++|++|++.+++.+  ..++.++++.+... ...++.+|++|..++
T Consensus         3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~v   74 (258)
T PRK07370          3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLN-PSLFLPCDVQDDAQI   74 (258)
T ss_pred             ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccC-cceEeecCcCCHHHH
Confidence            4689999999986  89999999999999999999876543  34455555654432 345678888886544

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.97  E-value=1.8e-09  Score=84.72  Aligned_cols=67  Identities=19%  Similarity=0.313  Sum_probs=50.2

Q ss_pred             CCCCCEEEEeCCc--ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s--~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .+.+|+++|||++  +|||+++|+.|+++|++|++.+|++ ...+.++++.++.+. ...+.+|++|+.++
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~-~~~~~~~~l~~~~~~-~~~~~~Dl~~~~~v   75 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD-ALKKRVEPLAAELGA-FVAGHCDVTDEASI   75 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHHHhcCC-ceEEecCCCCHHHH
Confidence            3578999999997  8999999999999999999998873 233344555444443 34578888876543

>PRK08703 short chain dehydrogenase; Provisional

Probab=98.97  E-value=3.3e-09  Score=80.88  Aligned_cols=65  Identities=23%  Similarity=0.412  Sum_probs=52.9

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAK  141 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~  141 (147)
                      +|++|+++|||+++|||.++++.|+++|++|++++|+++.+++..+++.+..+....++.+|+++
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~   67 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMS   67 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecc
Confidence            47789999999999999999999999999999999999888777777654433334556677764

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.97  E-value=3.4e-09  Score=84.45  Aligned_cols=69  Identities=17%  Similarity=0.277  Sum_probs=55.0

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~-~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      +..++++|+++|||+++|||++++++|+++|++|++.+++. +..++..+++.+. +....++.+|+++.+
T Consensus         6 ~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~-g~~~~~~~~Dv~d~~   75 (306)
T PRK07792          6 NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA-GAKAVAVAGDISQRA   75 (306)
T ss_pred             CCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc-CCeEEEEeCCCCCHH
Confidence            34568899999999999999999999999999999998753 4566666666543 444667788888754

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=98.97  E-value=2.6e-09  Score=82.25  Aligned_cols=65  Identities=14%  Similarity=0.216  Sum_probs=55.1

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhC-CeEEEEEcccCCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVVQNVMLAKGMK  144 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~-~~~~~~~~dv~~~~~  144 (147)
                      +|+++|||+++|||.++++.|+++|++|++++|+.+.+++..+++....+ ....++.+|++++.+
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   67 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQS   67 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHH
Confidence            67999999999999999999999999999999998888877777766554 346678899987554

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=98.96  E-value=2.3e-09  Score=77.22  Aligned_cols=64  Identities=33%  Similarity=0.421  Sum_probs=53.2

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC--hHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS--AERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~--~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      |+++||||++|||++++++|+++|+ +|++++|+  .+..++...++.... ....++.+|+++..++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~-~~~~~~~~D~~~~~~~   67 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPG-AKITFIECDLSDPESI   67 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTT-SEEEEEESETTSHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccc-cccccccccccccccc
Confidence            6899999999999999999999965 78888998  677777888887554 6677888999986543

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=98.96  E-value=3.3e-09  Score=81.77  Aligned_cols=70  Identities=24%  Similarity=0.347  Sum_probs=56.9

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .+++++|+++|||+++|||.++++.|+++|++|++++|+.+++++..+++... +....++.+|++|...+
T Consensus         7 ~~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~-~~~~~~~~~Dl~d~~~i   76 (259)
T PRK08213          7 LFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL-GIDALWIAADVADEADI   76 (259)
T ss_pred             hhCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEccCCCHHHH
Confidence            34578999999999999999999999999999999999988877766666543 33455678898886543

>PRK06701 short chain dehydrogenase; Provisional

Probab=98.95  E-value=8e-09  Score=81.70  Aligned_cols=69  Identities=23%  Similarity=0.254  Sum_probs=52.9

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH-HHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~-~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ...+++|+++|||+++|||.+++++|+++|++|++++|+.+. .++..+++. ..+....++.+|+++...
T Consensus        41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~  110 (290)
T PRK06701         41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVE-KEGVKCLLIPGDVSDEAF  110 (290)
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHH-hcCCeEEEEEccCCCHHH
Confidence            356789999999999999999999999999999999998643 444444443 334445677888887543

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.95  E-value=1.9e-09  Score=83.61  Aligned_cols=64  Identities=16%  Similarity=0.268  Sum_probs=47.2

Q ss_pred             CCCCCEEEEeCC--cChHHHHHHHHHHHCCCEEEEEeCCh--HHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSA--ERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~--s~GIG~~~a~~La~~Ga~V~i~~r~~--~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+++|+++|||+  ++|||+++++.|+++|++|++++|+.  +.+++..+    +.+....++.+|++|..+
T Consensus         4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~----~~~~~~~~~~~Dv~~~~~   71 (256)
T PRK07889          4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAK----RLPEPAPVLELDVTNEEH   71 (256)
T ss_pred             cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHH----hcCCCCcEEeCCCCCHHH
Confidence            467899999999  89999999999999999999998764  22333322    223334466777777544

>PRK12939 short chain dehydrogenase; Provisional

Probab=98.95  E-value=4e-09  Score=80.41  Aligned_cols=68  Identities=24%  Similarity=0.311  Sum_probs=55.5

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ..+++|+++|||+++|||.++++.|+++|++|++++|+++++++..+++... +....++.+|+++..+
T Consensus         3 ~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~   70 (250)
T PRK12939          3 SNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA-GGRAHAIAADLADPAS   70 (250)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHH
Confidence            3467899999999999999999999999999999999998887777776544 3335667788887543

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=98.95  E-value=3.5e-09  Score=81.61  Aligned_cols=65  Identities=25%  Similarity=0.346  Sum_probs=50.1

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      .+++|+++|||+++|||++++++|+++|++|++++|++. .++..+++... +....++.+|+++..
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~-~~~~~~~~~D~~~~~   69 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAA-GGEALALTADLETYA   69 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhc-CCeEEEEEEeCCCHH
Confidence            467899999999999999999999999999999999853 44444555433 333456778887754

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.95  E-value=3.8e-09  Score=80.24  Aligned_cols=45  Identities=49%  Similarity=0.783  Sum_probs=40.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      .+.|.+++||||++|||+++|++|.+.|-+|++++|+++.+++..
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~   46 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAK   46 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHH
Confidence            457889999999999999999999999999999999988776543

>PRK06914 short chain dehydrogenase; Provisional

Probab=98.94  E-value=3.4e-09  Score=82.64  Aligned_cols=68  Identities=19%  Similarity=0.237  Sum_probs=54.8

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHh-CCeEEEEEcccCCCCCc
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF-GEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~~~dv~~~~~~  145 (147)
                      |.+|+++||||++|||.++++.|+++|++|++++|+.+..++..+++.... +....++.+|++|..++
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~   69 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSI   69 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHH
Confidence            357899999999999999999999999999999999888777666554432 23466778999886544

>PRK08278 short chain dehydrogenase; Provisional

Probab=98.94  E-value=3.2e-09  Score=83.04  Aligned_cols=67  Identities=25%  Similarity=0.423  Sum_probs=52.7

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH-------HHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-------VDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++++|+++|||+++|||.++++.|+++|++|++++|+.+.       +++..+++... +....++.+|+++..+
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~D~~~~~~   76 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA-GGQALPLVGDVRDEDQ   76 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc-CCceEEEEecCCCHHH
Confidence            4678999999999999999999999999999999997642       34444555443 4446677899888654

>PRK08643 acetoin reductase; Validated

Probab=98.94  E-value=3.9e-09  Score=81.18  Aligned_cols=64  Identities=25%  Similarity=0.443  Sum_probs=53.2

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +|+++|||+++|||.++++.|+++|++|++++|+.+.+++...++... +....++.+|++++..
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~   65 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD-GGKAIAVKADVSDRDQ   65 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCCCCHHH
Confidence            689999999999999999999999999999999988887777766543 3445667888887643

>PRK06949 short chain dehydrogenase; Provisional

Probab=98.94  E-value=4.8e-09  Score=80.54  Aligned_cols=67  Identities=25%  Similarity=0.362  Sum_probs=55.1

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+.+|+++|||+++|||+++++.|+++|++|++++|+.+.+++...++..... ...++.+|+++..+
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~   72 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGG-AAHVVSLDVTDYQS   72 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHH
Confidence            47789999999999999999999999999999999999888777776654433 35567788877543

>PRK12747 short chain dehydrogenase; Provisional

Probab=98.92  E-value=4.8e-09  Score=80.60  Aligned_cols=65  Identities=26%  Similarity=0.347  Sum_probs=50.1

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEe-CChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~-r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      +++|+++|||+++|||.+++++|+++|++|++.+ ++.+..++...++... +.....+.+|+++..
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~   67 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN-GGSAFSIGANLESLH   67 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc-CCceEEEecccCCHH
Confidence            5689999999999999999999999999999875 5666666666666543 333455677777643

>PRK09135 pteridine reductase; Provisional

Probab=98.92  E-value=5.8e-09  Score=79.37  Aligned_cols=68  Identities=24%  Similarity=0.187  Sum_probs=52.2

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~-~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +.+++++|||++++||+.++++|+++|++|++++|+ .+..++...++....+....++.+|+++...+
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~   72 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDAL   72 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHH
Confidence            466899999999999999999999999999999986 44455555555444444466778888876543

>PRK07024 short chain dehydrogenase; Provisional

Probab=98.92  E-value=2.5e-09  Score=82.61  Aligned_cols=63  Identities=25%  Similarity=0.443  Sum_probs=50.4

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +|+++|||+++|||.++++.|+++|++|++++|+.+.+++..+++... + ...++.+|+++..+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~Dl~~~~~   64 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA-A-RVSVYAADVRDADA   64 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC-C-eeEEEEcCCCCHHH
Confidence            468999999999999999999999999999999988777665555322 2 35567888887543

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=98.92  E-value=4.8e-09  Score=79.91  Aligned_cols=66  Identities=21%  Similarity=0.339  Sum_probs=54.7

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      ++.+|+++|||++++||.++++.|+++|++|++++|+.++.++..+++... +....++.+|+.|..
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~   68 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA-GGKARARQVDVRDRA   68 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCCCCHH
Confidence            356789999999999999999999999999999999988877777776554 333567788888754

>PRK05875 short chain dehydrogenase; Provisional

Probab=98.92  E-value=5.7e-09  Score=81.17  Aligned_cols=68  Identities=21%  Similarity=0.335  Sum_probs=54.7

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhC-CeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~-~~~~~~~~dv~~~~~  144 (147)
                      .+++|+++|||+++|||.++++.|+++|++|++++|+.+..++..+++....+ ....++.+|++++.+
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~   72 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQ   72 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHH
Confidence            36789999999999999999999999999999999998877766666654322 335667888887654

>PRK06500 short chain dehydrogenase; Provisional

Probab=98.92  E-value=5.1e-09  Score=79.89  Aligned_cols=62  Identities=34%  Similarity=0.472  Sum_probs=47.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      .+++|+++|||+++|||.+++++|+++|++|++++|+.+.+++..+++    +....++.+|+++.
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~   64 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL----GESALVIRADAGDV   64 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh----CCceEEEEecCCCH
Confidence            467899999999999999999999999999999999876655443332    33344556666654

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.91  E-value=5.3e-09  Score=79.94  Aligned_cols=66  Identities=21%  Similarity=0.378  Sum_probs=53.4

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEE-EeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i-~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      |.+|+++|||+++|||+++++.|+++|++|++ .+|+.++.++..+++... +....++.+|++++.+
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   68 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL-GRKALAVKANVGDVEK   68 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHH
Confidence            46789999999999999999999999999876 578887777777776554 4445677899888654

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.91  E-value=6e-09  Score=79.46  Aligned_cols=67  Identities=19%  Similarity=0.279  Sum_probs=55.2

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++++++++|||+++|||..+++.|+++|++|++++|+.+++++..+++... +....++.+|+++...
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   68 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL-GTEVRGYAANVTDEED   68 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEcCCCCHHH
Confidence            367899999999999999999999999999999999998887777766543 3345667888887543

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=98.91  E-value=4e-09  Score=84.40  Aligned_cols=65  Identities=25%  Similarity=0.321  Sum_probs=52.8

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+|+++|||+++|||+++++.|+++| ++|++++|+.+++++..+++... +....++.+|+++..+
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~   67 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMP-KDSYTIMHLDLGSLDS   67 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEEcCCCCHHH
Confidence            36799999999999999999999999 99999999998887776666422 3335567889887544

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=98.91  E-value=7.5e-09  Score=79.98  Aligned_cols=67  Identities=25%  Similarity=0.357  Sum_probs=52.8

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~-~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++++|+++||||++|||.++++.|+++|++|++.+|+. +..++..+++... +....++.+|+++...
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~   71 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA-GGEAIAVKGDVTVESD   71 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-CCeEEEEEecCCCHHH
Confidence            47899999999999999999999999999999988854 4455555666543 4445677888887654

>PRK07832 short chain dehydrogenase; Provisional

Probab=98.91  E-value=4e-09  Score=82.15  Aligned_cols=64  Identities=20%  Similarity=0.274  Sum_probs=52.7

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      |+++||||++|||+++++.|+++|++|++++|+.+.+++..+++....+....++.+|++++.+
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   64 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDA   64 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHH
Confidence            4799999999999999999999999999999999888887777765544444556788887543

>PRK12746 short chain dehydrogenase; Provisional

Probab=98.91  E-value=5.9e-09  Score=79.95  Aligned_cols=68  Identities=24%  Similarity=0.331  Sum_probs=53.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~-~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ++++|+++|||+++|||.++++.|+++|++|++. .|+.+..++..+++... +....++.+|++|..++
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~i   71 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN-GGKAFLIEADLNSIDGV   71 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCcEEEEEcCcCCHHHH
Confidence            4678899999999999999999999999998775 68877777666666432 33356778999886543

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=98.91  E-value=6.1e-09  Score=79.63  Aligned_cols=65  Identities=22%  Similarity=0.332  Sum_probs=49.1

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++++|+++|||+++|||.+++++|+++|++|++++|+..  ++..+++.+ .+....++.+|+++..+
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~-~~~~~~~~~~D~~~~~~   66 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEA-LGRRFLSLTADLSDIEA   66 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHh-cCCceEEEECCCCCHHH
Confidence            478999999999999999999999999999999998752  233333332 23335567788877544

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=98.91  E-value=3.8e-09  Score=81.63  Aligned_cols=61  Identities=38%  Similarity=0.633  Sum_probs=51.3

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +++|||+++|||++++++|+++|++|++++|+++.+++..+++.+. + ...++.+|++|.++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~Dv~d~~~   62 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY-G-EVYAVKADLSDKDD   62 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-C-CceEEEcCCCCHHH
Confidence            6899999999999999999999999999999998888887777543 3 34567888887554

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=98.89  E-value=7.6e-09  Score=78.97  Aligned_cols=66  Identities=20%  Similarity=0.322  Sum_probs=53.8

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +++|+++|||++++||.+++++|+++|++|++++|+.+..++..+++... +....++.+|+++..+
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~   66 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK-GGNAQAFACDITDRDS   66 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHH
Confidence            46789999999999999999999999999999999988877766666543 3345667888877543

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07806 short chain dehydrogenase; Provisional

Probab=98.88  E-value=9.3e-09  Score=78.61  Aligned_cols=67  Identities=28%  Similarity=0.410  Sum_probs=51.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH-HHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~-~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++++|+++|||+++|||.++++.|+++|++|++++|+.+ ..++...++... +.....+.+|+++..+
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~   70 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA-GGRASAVGADLTDEES   70 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc-CCceEEEEcCCCCHHH
Confidence            367889999999999999999999999999999999754 445555555443 3335667888887554

>PRK07326 short chain dehydrogenase; Provisional

Probab=98.88  E-value=7.8e-09  Score=78.43  Aligned_cols=64  Identities=28%  Similarity=0.419  Sum_probs=52.5

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      +.+++++|||++|+||..++++|+++|++|++++|+++.+++..+++.+.  ....++.+|+++..
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~D~~~~~   67 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK--GNVLGLAADVRDEA   67 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc--CcEEEEEccCCCHH
Confidence            56789999999999999999999999999999999988877776666543  23556777877654

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=98.88  E-value=8.8e-09  Score=80.03  Aligned_cols=64  Identities=20%  Similarity=0.262  Sum_probs=51.7

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++++|||+++|||++++++|+++|++|++++| +.+.+++..+++....+....++.+|++|...
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~   66 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSAT   66 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchh
Confidence            48999999999999999999999999999765 45677777677755445556678999999753

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK12828 short chain dehydrogenase; Provisional

Probab=98.87  E-value=7.5e-09  Score=78.17  Aligned_cols=65  Identities=22%  Similarity=0.246  Sum_probs=49.8

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      +.+++|+++|||++++||..+++.|+++|++|++++|+.++.++..+++...   ...++.+|+.|..
T Consensus         3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~D~~~~~   67 (239)
T PRK12828          3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD---ALRIGGIDLVDPQ   67 (239)
T ss_pred             CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc---CceEEEeecCCHH
Confidence            3577899999999999999999999999999999999887766555554332   1234456666543

>PRK08226 short chain dehydrogenase; Provisional

Probab=98.87  E-value=1e-08  Score=79.16  Aligned_cols=66  Identities=26%  Similarity=0.383  Sum_probs=51.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+.+|+++|||+++|||+++++.|+++|++|++++|+.+ ..+..+++... +....++.+|++++.+
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~-~~~~~~~~~Dl~~~~~   68 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR-GHRCTAVVADVRDPAS   68 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh-CCceEEEECCCCCHHH
Confidence            467899999999999999999999999999999999874 44444555433 3334567888887654

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=98.87  E-value=8.2e-09  Score=82.80  Aligned_cols=50  Identities=26%  Similarity=0.387  Sum_probs=43.8

Q ss_pred             CCCCCCCEEEEeCC--cChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Q 032110           75 EPMLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR  125 (147)
Q Consensus        75 ~~~~~~k~~lVTG~--s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~  125 (147)
                      .++++||+++|||+  ++|||+++|+.|+++|++|++ +|+.+.+++...++.
T Consensus         4 ~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~   55 (303)
T PLN02730          4 PIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLR   55 (303)
T ss_pred             CcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhh
Confidence            34589999999999  899999999999999999998 788888887776664

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.87  E-value=8.2e-09  Score=80.32  Aligned_cols=66  Identities=24%  Similarity=0.393  Sum_probs=47.7

Q ss_pred             CCCCEEEEeCC--cChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           78 LPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        78 ~~~k~~lVTG~--s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +++|+++||||  ++|||++++++|+++|++|++.+|.. ..++..+++.++.+.. ..+.+|++|++++
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v   71 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGD-RFKDRITEFAAEFGSD-LVFPCDVASDEQI   71 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccch-HHHHHHHHHHHhcCCc-ceeeccCCCHHHH
Confidence            67899999996  68999999999999999999987642 2223334444443432 4577888876554

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=98.86  E-value=1.2e-08  Score=77.26  Aligned_cols=67  Identities=25%  Similarity=0.389  Sum_probs=54.0

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++.+|+++|||++++||..+++.|+++|++|++++|+++..++...++... +....++.+|+++...
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   68 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA-GGEARVLVFDVSDEAA   68 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCceEEEEccCCCHHH
Confidence            456789999999999999999999999999999999988877766666543 3335566788887543

>PRK07985 oxidoreductase; Provisional

Probab=98.86  E-value=1.8e-08  Score=79.85  Aligned_cols=67  Identities=25%  Similarity=0.325  Sum_probs=50.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh--HHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA--ERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~--~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++++|+++|||+++|||+++++.|+++|++|++.+|+.  +..++..+.+. ..+....++.+|+++...
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~  114 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIE-ECGRKAVLLPGDLSDEKF  114 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHH-HcCCeEEEEEccCCCHHH
Confidence            57899999999999999999999999999999988653  33444433333 334445667888887543

>PRK06484 short chain dehydrogenase; Validated

Probab=98.86  E-value=1.3e-08  Score=86.04  Aligned_cols=64  Identities=33%  Similarity=0.535  Sum_probs=51.0

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ...+|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++    +.....+.+|++|+.+
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~  329 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL----GDEHLSVQADITDEAA  329 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceeEEEccCCCHHH
Confidence            457899999999999999999999999999999999987776554433    3334556777777543

>PRK06198 short chain dehydrogenase; Provisional

Probab=98.86  E-value=1e-08  Score=78.84  Aligned_cols=67  Identities=30%  Similarity=0.512  Sum_probs=54.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~-V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+++|+++|||+++|||..+++.|+++|++ |++++|+.+..++...++.+ .+....++.+|++++..
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~   70 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEA-LGAKAVFVQADLSDVED   70 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHh-cCCeEEEEEccCCCHHH
Confidence            468899999999999999999999999998 99999998777766666643 34445667888887543

>PRK07454 short chain dehydrogenase; Provisional

Probab=98.86  E-value=1.3e-08  Score=77.55  Aligned_cols=65  Identities=29%  Similarity=0.413  Sum_probs=53.4

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++|+++|||+++|||..++++|+++|++|++++|+++..++..+++.+. +....++.+|+++..+
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   69 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST-GVKAAAYSIDLSNPEA   69 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC-CCcEEEEEccCCCHHH
Confidence            4579999999999999999999999999999999998877776666543 3345677899988653

>PRK12937 short chain dehydrogenase; Provisional

Probab=98.85  E-value=1.4e-08  Score=77.33  Aligned_cols=66  Identities=21%  Similarity=0.342  Sum_probs=49.0

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH-HHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~-~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      ++++|+++|||+++|||+.+++.|+++|++|+++.++.+ ..++..+++.. .+....++.+|+++..
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~   68 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEA-AGGRAIAVQADVADAA   68 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHH
Confidence            567899999999999999999999999999988876543 34444444443 2344556677777643

>PRK07856 short chain dehydrogenase; Provisional

Probab=98.85  E-value=7.1e-09  Score=79.74  Aligned_cols=64  Identities=38%  Similarity=0.568  Sum_probs=49.0

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH-------------------HHHHHHHHHHHhCCeEEEEE
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-------------------VDSAVQSLREEFGEQHVVQN  136 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~-------------------~~~~~~~l~~~~~~~~~~~~  136 (147)
                      +++++|+++||||++|||+++++.|+++|++|++++|+.+.                   .++.++++.+.++..+++++
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   81 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVN   81 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhhhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            35789999999999999999999999999999999987632                   23334444555566666666


Q ss_pred             ccc
Q 032110          137 VML  139 (147)
Q Consensus       137 ~dv  139 (147)
                      +..
T Consensus        82 ~ag   84 (252)
T PRK07856         82 NAG   84 (252)
T ss_pred             CCC
Confidence            554

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=98.85  E-value=9.2e-09  Score=79.47  Aligned_cols=63  Identities=24%  Similarity=0.395  Sum_probs=53.1

Q ss_pred             EEEEeCCcChHHHHHHHHHHH----CCCEEEEEeCChHHHHHHHHHHHHHh-CCeEEEEEcccCCCCC
Q 032110           82 NVLITGSTKGIGYALAKEFLK----AGDNVIICSRSAERVDSAVQSLREEF-GEQHVVQNVMLAKGMK  144 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~----~Ga~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~~~dv~~~~~  144 (147)
                      +++|||+++|||++++++|++    .|++|++++|+++.+++..+++.... +....++.+|+++..+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~   69 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAG   69 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHH
Confidence            689999999999999999997    79999999999999888888886533 3345678899988654

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.85  E-value=1.3e-08  Score=77.29  Aligned_cols=66  Identities=27%  Similarity=0.314  Sum_probs=53.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+.+|+++|||+++|||..+++.|+++|++|++++|+++..++..+++... + ...++.+|+++..+
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~Dl~~~~~   67 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-G-NIHYVVGDVSSTES   67 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CeEEEECCCCCHHH
Confidence            367889999999999999999999999999999999988777665555432 3 35667899887553

>PRK06057 short chain dehydrogenase; Provisional

Probab=98.85  E-value=6.4e-09  Score=80.13  Aligned_cols=44  Identities=30%  Similarity=0.413  Sum_probs=39.2

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      +++|+++|||+++|||.+++++|+++|++|++++|+....++..
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~   48 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAA   48 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            67899999999999999999999999999999999876655443

>PRK06101 short chain dehydrogenase; Provisional

Probab=98.85  E-value=7.6e-09  Score=79.22  Aligned_cols=59  Identities=31%  Similarity=0.395  Sum_probs=47.1

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      |+++|||+++|||.++++.|+++|++|++++|+++.+++..+    ... ...++.+|+++..+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~~~-~~~~~~~D~~~~~~   60 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT----QSA-NIFTLAFDVTDHPG   60 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----hcC-CCeEEEeeCCCHHH
Confidence            689999999999999999999999999999999876654432    222 34567888887654

>PRK08267 short chain dehydrogenase; Provisional

Probab=98.84  E-value=9.3e-09  Score=79.33  Aligned_cols=61  Identities=20%  Similarity=0.195  Sum_probs=49.6

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      |+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.   +....++.+|+++..+
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~   62 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG---AGNAWTGALDVTDRAA   62 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc---CCceEEEEecCCCHHH
Confidence            689999999999999999999999999999999887776655443   3345667888877543

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=98.84  E-value=1.3e-08  Score=89.41  Aligned_cols=70  Identities=19%  Similarity=0.347  Sum_probs=57.7

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCC-eEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE-QHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~-~~~~~~~dv~~~~~~  145 (147)
                      ..+.+|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++....+. ....+.+|+++..++
T Consensus       410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v  480 (676)
T TIGR02632       410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAV  480 (676)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHH
Confidence            3478999999999999999999999999999999999998887777777655432 356678999886543

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=98.84  E-value=3.4e-09  Score=80.07  Aligned_cols=66  Identities=21%  Similarity=0.280  Sum_probs=52.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++..|+++||||++|||+++++.|+.+|++|++.+++.+..++.+..|..  .+.+..+.||+.+..+
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g--~~~h~aF~~DVS~a~~   76 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG--YGDHSAFSCDVSKAHD   76 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC--CCccceeeeccCcHHH
Confidence            46778999999999999999999999999999999988776666655532  1345667777776544

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=98.84  E-value=1.8e-08  Score=77.19  Aligned_cols=64  Identities=25%  Similarity=0.432  Sum_probs=52.1

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLA  140 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~  140 (147)
                      .+++|+++|||+++|||..+++.|+++|++|++++|+.+.+++..+++.+.......++.+|+.
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~   72 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLL   72 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEeccc
Confidence            4689999999999999999999999999999999999888877777776543333445556664

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.84  E-value=1.6e-08  Score=76.78  Aligned_cols=67  Identities=24%  Similarity=0.394  Sum_probs=54.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~-~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+.+|+++|||+++|||.++++.|+++|++|+++ +|+.+..++..+++... +....++.+|+++..+
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   69 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE-GGDAIAVKADVSSEED   69 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCeEEEEECCCCCHHH
Confidence            3667899999999999999999999999999998 99888777776666543 3345677888887553

>PRK07201 short chain dehydrogenase; Provisional

Probab=98.83  E-value=1.2e-08  Score=88.44  Aligned_cols=68  Identities=31%  Similarity=0.399  Sum_probs=57.1

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ..+++|+++||||++|||.++++.|+++|++|++++|+++.+++..+++... +....++.+|++|..+
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~  434 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK-GGTAHAYTCDLTDSAA  434 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEecCCCHHH
Confidence            3578899999999999999999999999999999999998888877777554 3345677888887554

>PRK05650 short chain dehydrogenase; Provisional

Probab=98.83  E-value=1.3e-08  Score=79.18  Aligned_cols=63  Identities=24%  Similarity=0.366  Sum_probs=53.4

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      |+++|||+++|||+++++.|+++|++|++.+|+.+.+++...++... +....++.+|++++.+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~   63 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA-GGDGFYQRCDVRDYSQ   63 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEccCCCHHH
Confidence            47899999999999999999999999999999998888887777654 3345677889987543

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=98.83  E-value=1.6e-08  Score=77.95  Aligned_cols=66  Identities=17%  Similarity=0.205  Sum_probs=48.0

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      .+++++|+++|||+++|||.+++++|+++|++|++.+++..  ++..+++... +.....+.+|++|.+
T Consensus         5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~-~~~~~~~~~Dl~~~~   70 (253)
T PRK08993          5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL-GRRFLSLTADLRKID   70 (253)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc-CCeEEEEECCCCCHH
Confidence            34678999999999999999999999999999998877542  2333344322 333456677777643

>PRK06484 short chain dehydrogenase; Validated

Probab=98.83  E-value=1.1e-08  Score=86.49  Aligned_cols=62  Identities=32%  Similarity=0.528  Sum_probs=48.2

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      ..+|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++    +.....+.+|++++.
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~   64 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL----GPDHHALAMDVSDEA   64 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceeEEEeccCCHH
Confidence            46889999999999999999999999999999999887766554443    223345566666543

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=98.83  E-value=1.4e-08  Score=77.46  Aligned_cols=66  Identities=15%  Similarity=0.196  Sum_probs=48.0

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~-~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      |++|+++|||+++|||+++++.|+++|++|++. +++....++..+++... +....++.+|++|..+
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   67 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL-GFDFIASEGNVGDWDS   67 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc-CCcEEEEEcCCCCHHH
Confidence            468999999999999999999999999998885 44555555555555432 3334556777776543

>PRK06398 aldose dehydrogenase; Validated

Probab=98.82  E-value=2.9e-08  Score=76.91  Aligned_cols=64  Identities=22%  Similarity=0.323  Sum_probs=52.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH----------------HHHHHHHHHHHHhCCeEEEEEcccC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE----------------RVDSAVQSLREEFGEQHVVQNVMLA  140 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~----------------~~~~~~~~l~~~~~~~~~~~~~dv~  140 (147)
                      ++++|+++|||+++|||+++++.|+++|++|++++|+++                ..+++++++.++++..++++++...
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~   82 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGI   82 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            477899999999999999999999999999999887643                3455666777777888888887653

>PRK12743 oxidoreductase; Provisional

Probab=98.81  E-value=2e-08  Score=77.50  Aligned_cols=64  Identities=20%  Similarity=0.250  Sum_probs=49.7

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +|+++||||++|||+++++.|+++|++|+++++ +.+.+++..+++.. .+....++.+|+++..+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~   66 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRS-HGVRAEIRQLDLSDLPE   66 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHh-cCCceEEEEccCCCHHH
Confidence            578999999999999999999999999988865 55556666555544 34456677888887543

>PRK07775 short chain dehydrogenase; Provisional

Probab=98.81  E-value=2.7e-08  Score=77.73  Aligned_cols=67  Identities=25%  Similarity=0.344  Sum_probs=53.8

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+.+|+++|||+++|||.++++.|+++|++|++++|+.+.+++...++... +....++.+|+++..+
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~   73 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD-GGEAVAFPLDVTDPDS   73 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCCCCHHH
Confidence            356789999999999999999999999999999999887777666665543 3345667889887654

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=98.81  E-value=2e-08  Score=76.26  Aligned_cols=63  Identities=24%  Similarity=0.327  Sum_probs=47.4

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      ++++|+++|||+++|||+++++.|+++|+.|++.+|+.+.+++...++    +....++.+|+++..
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~   65 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL----GERVKIFPANLSDRD   65 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----CCceEEEEccCCCHH
Confidence            567899999999999999999999999999999988877665543322    222344556666543

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.81  E-value=1.8e-08  Score=76.97  Aligned_cols=63  Identities=22%  Similarity=0.495  Sum_probs=45.4

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      ++++|+++|||+++|||+++++.|+++|++|++.++ +.+..++...    +.+....++.+|+++..
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~   65 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALAD----ELGDRAIALQADVTDRE   65 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH----HhCCceEEEEcCCCCHH
Confidence            467889999999999999999999999999988765 4443333322    22333455667776644

>PRK05855 short chain dehydrogenase; Validated

Probab=98.80  E-value=2e-08  Score=85.05  Aligned_cols=68  Identities=19%  Similarity=0.273  Sum_probs=57.0

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ..+.+++++||||++|||.+++++|+++|++|++++|+.+.+++..+++... +....++.+|++|...
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~  378 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA-GAVAHAYRVDVSDADA  378 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHH
Confidence            3466789999999999999999999999999999999998888887777654 3446677899988654

>PRK06940 short chain dehydrogenase; Provisional

Probab=98.80  E-value=1.9e-08  Score=78.85  Aligned_cols=63  Identities=29%  Similarity=0.422  Sum_probs=51.3

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +|+++|||+ +|||+++++.|+ +|++|++++|+.+.+++..+++... +....++.+|++|..++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv~d~~~i   64 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA-GFDVSTQEVDVSSRESV   64 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEeecCCHHHH
Confidence            578999997 699999999996 8999999999988888777777543 33456788999986543

>PRK06182 short chain dehydrogenase; Validated

Probab=98.80  E-value=1.2e-08  Score=79.44  Aligned_cols=41  Identities=27%  Similarity=0.446  Sum_probs=37.2

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      ++|+++|||+++|||++++++|+++|++|++++|+.+++++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~   42 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMED   42 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            57899999999999999999999999999999998876543

>PRK06180 short chain dehydrogenase; Provisional

Probab=98.79  E-value=1.8e-08  Score=78.75  Aligned_cols=61  Identities=25%  Similarity=0.213  Sum_probs=46.7

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      .+|+++|||+++|||.+++++|+++|++|++++|+.+.+++..+    ..+.....+.+|++|+.
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~----~~~~~~~~~~~D~~d~~   63 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEA----LHPDRALARLLDVTDFD   63 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHh----hcCCCeeEEEccCCCHH
Confidence            46799999999999999999999999999999998876543322    22333455667776644

>PRK06841 short chain dehydrogenase; Provisional

Probab=98.79  E-value=2.3e-08  Score=76.76  Aligned_cols=64  Identities=23%  Similarity=0.265  Sum_probs=47.1

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      +++++|+++|||+++|||.++++.|+++|++|++++|+.+.. +...++.   +.....+.+|+++..
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~---~~~~~~~~~Dl~~~~   74 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLL---GGNAKGLVCDVSDSQ   74 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhh---CCceEEEEecCCCHH
Confidence            568899999999999999999999999999999999987532 2222221   222335566666544

>PRK08263 short chain dehydrogenase; Provisional

Probab=98.79  E-value=1.8e-08  Score=78.63  Aligned_cols=62  Identities=19%  Similarity=0.360  Sum_probs=48.0

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+|+++|||+++|||+.++++|+++|++|++++|+.+.+++..++    .+....++.+|++++.+
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~~~~~   63 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEK----YGDRLLPLALDVTDRAA   63 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHh----ccCCeeEEEccCCCHHH
Confidence            468999999999999999999999999999999998776544332    23334556777776543

>PRK09291 short chain dehydrogenase; Provisional

Probab=98.79  E-value=2.2e-08  Score=76.85  Aligned_cols=64  Identities=25%  Similarity=0.355  Sum_probs=50.8

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +|+++|||+++|||.++++.|+++|++|++++|+.+..++..+..... +....++.+|+++..+
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   65 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR-GLALRVEKLDLTDAID   65 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcceEEEeeCCCHHH
Confidence            568999999999999999999999999999999987776655544433 3335667888887543

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=98.79  E-value=3.2e-08  Score=74.96  Aligned_cols=66  Identities=26%  Similarity=0.373  Sum_probs=49.4

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH-HHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~-~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      ++++|+++|||++++||.++++.|+++|++|++..|+.+. .++..+++... +....++.+|+++..
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~   68 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL-GGKALAVQGDVSDAE   68 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc-CCceEEEEcCCCCHH
Confidence            4678899999999999999999999999999888776543 44444444332 344566677877754

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=98.78  E-value=3.4e-08  Score=75.42  Aligned_cols=67  Identities=27%  Similarity=0.365  Sum_probs=51.7

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++++|+++|||+++|||.+++++|+++|++|++..+ +++..++..+++... +....++.+|++++..
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~   70 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE-GHDVYAVQADVSKVED   70 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc-CCeEEEEECCCCCHHH
Confidence            367899999999999999999999999999987654 455666665666543 3446778899887543

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.78  E-value=3.4e-08  Score=76.35  Aligned_cols=68  Identities=21%  Similarity=0.253  Sum_probs=50.1

Q ss_pred             CCCCCEEEEeCCc--ChHHHHHHHHHHHCCCEEEEEeCC-----------hHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           77 MLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRS-----------AERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        77 ~~~~k~~lVTG~s--~GIG~~~a~~La~~Ga~V~i~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      .+++|+++|||++  +|||+++|++|+++|++|+++++.           .+..++..+++.+ .+....++.+|+++.+
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~D~~~~~   81 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLK-NGVKVSSMELDLTQND   81 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHh-cCCeEEEEEcCCCCHH
Confidence            5789999999998  499999999999999999987642           2233334444443 3445667789998865


Q ss_pred             Cc
Q 032110          144 KW  145 (147)
Q Consensus       144 ~~  145 (147)
                      ++
T Consensus        82 ~i   83 (256)
T PRK12859         82 AP   83 (256)
T ss_pred             HH
Confidence            43

>PRK12744 short chain dehydrogenase; Provisional

Probab=98.78  E-value=3.1e-08  Score=76.36  Aligned_cols=67  Identities=19%  Similarity=0.317  Sum_probs=49.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC----hHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS----AERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~----~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+++|+++|||+++|||.++++.|+++|++|++++++    .+..++..+++... +....++.+|+++..+
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~   75 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA-GAKAVAFQADLTTAAA   75 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh-CCcEEEEecCcCCHHH
Confidence            4678999999999999999999999999997776543    33444555555433 3345667899887654

>PRK06181 short chain dehydrogenase; Provisional

Probab=98.77  E-value=3e-08  Score=76.51  Aligned_cols=64  Identities=30%  Similarity=0.483  Sum_probs=52.9

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +++++|||+++|||.++++.|+++|++|++++|+.+..++..+++... +....++.+|+.+...
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~   64 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH-GGEALVVPTDVSDAEA   64 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHH
Confidence            468999999999999999999999999999999988877776666553 4446677888887543

>PRK12829 short chain dehydrogenase; Provisional

Probab=98.77  E-value=2.1e-08  Score=77.07  Aligned_cols=66  Identities=27%  Similarity=0.402  Sum_probs=50.8

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ..+++|+++|||+++|||..+++.|+++|++|++++|+.+..++..++....   ...++.+|++++..
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~   72 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA---KVTATVADVADPAQ   72 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC---ceEEEEccCCCHHH
Confidence            4578899999999999999999999999999999999887665544433211   24566777776543

>PRK09134 short chain dehydrogenase; Provisional

Probab=98.77  E-value=4.9e-08  Score=75.29  Aligned_cols=66  Identities=24%  Similarity=0.376  Sum_probs=50.4

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ..+|+++|||+++|||+++++.|+++|++|+++++ +.+.+++...++... +....++.+|++|...
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~   73 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL-GRRAVALQADLADEAE   73 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHH
Confidence            35789999999999999999999999999988766 445555555555443 3345667888887543

>TIGR02415 23BDH acetoin reductases

Probab=98.77  E-value=3e-08  Score=75.90  Aligned_cols=63  Identities=21%  Similarity=0.361  Sum_probs=52.0

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      |+++|||+++|||.++++.|+++|++|++++|+.+.+++..+++... +....++.+|++++..
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~   63 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA-GGKAVAYKLDVSDKDQ   63 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHH
Confidence            58999999999999999999999999999999988777776666543 4445677888887554

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=98.76  E-value=1.3e-08  Score=78.42  Aligned_cols=67  Identities=25%  Similarity=0.300  Sum_probs=52.2

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCe-EEEEEcccCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ-HVVQNVMLAKGM  143 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~-~~~~~~dv~~~~  143 (147)
                      ++++||.+++||+.+|||++++++|+++|..+.+++.+.|. -++.++|++.++.. .+++++||++..
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En-~~a~akL~ai~p~~~v~F~~~DVt~~~   68 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN-PEAIAKLQAINPSVSVIFIKCDVTNRG   68 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC-HHHHHHHhccCCCceEEEEEeccccHH
Confidence            46789999999999999999999999999887777766665 34556676666655 455678887743

>PRK05993 short chain dehydrogenase; Provisional

Probab=98.76  E-value=2e-08  Score=78.58  Aligned_cols=41  Identities=32%  Similarity=0.422  Sum_probs=36.9

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      .+|+++||||++|||+++++.|+++|++|++++|+.+.+++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~   43 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAA   43 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            35799999999999999999999999999999999876543

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=98.76  E-value=6.2e-08  Score=74.95  Aligned_cols=65  Identities=29%  Similarity=0.409  Sum_probs=52.5

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH------------------HHHHHHHHHHHHhCCeEEEEEc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE------------------RVDSAVQSLREEFGEQHVVQNV  137 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~------------------~~~~~~~~l~~~~~~~~~~~~~  137 (147)
                      ..+++|+++|||+++|||+++++.|+++|++|++.+++.+                  ..++.++++.+.++..+.++++
T Consensus         5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~   84 (266)
T PRK06171          5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQHENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNN   84 (266)
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4578999999999999999999999999999999887542                  3445566666677788888887


Q ss_pred             ccC
Q 032110          138 MLA  140 (147)
Q Consensus       138 dv~  140 (147)
                      ...
T Consensus        85 Ag~   87 (266)
T PRK06171         85 AGI   87 (266)
T ss_pred             Ccc
Confidence            653

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.76  E-value=2.4e-08  Score=76.90  Aligned_cols=39  Identities=41%  Similarity=0.568  Sum_probs=34.7

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      .++.+|+++|||+++|||+++++.|+++|++|++.+++.
T Consensus         3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~   41 (255)
T PRK06463          3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA   41 (255)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCc
Confidence            346789999999999999999999999999999887654

>PRK06523 short chain dehydrogenase; Provisional

Probab=98.75  E-value=7e-08  Score=74.34  Aligned_cols=64  Identities=30%  Similarity=0.433  Sum_probs=50.2

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH------------------HHHHHHHHHHHHhCCeEEEEEc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE------------------RVDSAVQSLREEFGEQHVVQNV  137 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~------------------~~~~~~~~l~~~~~~~~~~~~~  137 (147)
                      ..+++|+++|||+++|||.+++++|+++|++|++++|+.+                  ..++..+++.+.++..++++++
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~   84 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHV   84 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4578999999999999999999999999999999998643                  2333445555666777777776


Q ss_pred             cc
Q 032110          138 ML  139 (147)
Q Consensus       138 dv  139 (147)
                      ..
T Consensus        85 ag   86 (260)
T PRK06523         85 LG   86 (260)
T ss_pred             Cc
Confidence            54

>PRK07074 short chain dehydrogenase; Provisional

Probab=98.75  E-value=3.2e-08  Score=76.10  Aligned_cols=62  Identities=31%  Similarity=0.431  Sum_probs=50.1

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +|+++|||+++|||.++++.|+++|++|++++|+.+..++..+++.   +....++.+|+.+..+
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~   63 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG---DARFVPVACDLTDAAS   63 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CCceEEEEecCCCHHH
Confidence            5789999999999999999999999999999999887776655552   2234567888877554

>PRK08264 short chain dehydrogenase; Validated

Probab=98.75  E-value=2.6e-08  Score=75.73  Aligned_cols=60  Identities=27%  Similarity=0.411  Sum_probs=46.7

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      +.+.+|+++||||++|||.++++.|+++|+ +|++++|+.+++++        .+....++.+|+.+..
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--------~~~~~~~~~~D~~~~~   62 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--------LGPRVVPLQLDVTDPA   62 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--------cCCceEEEEecCCCHH
Confidence            346788999999999999999999999999 99999998766542        2333455566666543

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=98.74  E-value=3.7e-08  Score=75.25  Aligned_cols=64  Identities=23%  Similarity=0.348  Sum_probs=52.1

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +|+++|||++++||..+++.|+++|++|++++|+.+..++..+++... +....++.+|+.+..+
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   64 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA-GGSVIYLVADVTKEDE   64 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEECCCCCHHH
Confidence            468999999999999999999999999999999988777766665432 3445677888887653

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=98.74  E-value=3.4e-08  Score=75.58  Aligned_cols=66  Identities=23%  Similarity=0.426  Sum_probs=49.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH--HHHHHHHHHHHhC-CeEEEEEcccCC-CC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER--VDSAVQSLREEFG-EQHVVQNVMLAK-GM  143 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~--~~~~~~~l~~~~~-~~~~~~~~dv~~-~~  143 (147)
                      ++.+|+++|||+++|||+++|+.|+++|++|++..++.+.  .++..++.. ..+ .......+|+++ ..
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dvs~~~~   71 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-EAGGGRAAAVAADVSDDEE   71 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-hcCCCcEEEEEecCCCCHH
Confidence            4678999999999999999999999999998888887654  333333333 222 246677799987 44

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.74  E-value=4.3e-08  Score=75.18  Aligned_cols=64  Identities=27%  Similarity=0.358  Sum_probs=48.1

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~-~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .|+++|||+++|||.++++.|+++|++|++++|+. +..++..+++... +....++.+|++++.+
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   66 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL-GVEVIFFPADVADLSA   66 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc-CCceEEEEecCCCHHH
Confidence            36899999999999999999999999999999864 3444444444332 3345667888887543

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=98.74  E-value=6.3e-08  Score=83.44  Aligned_cols=70  Identities=27%  Similarity=0.235  Sum_probs=55.0

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHH-----h---CCeEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE-----F---GEQHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~-----~---~~~~~~~~~dv~~~~~  144 (147)
                      .....||+++||||+||||+.++++|+++|++|++++|+.+.+++..+++...     .   .....++.+|+.+..+
T Consensus        75 ~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~es  152 (576)
T PLN03209         75 LDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQ  152 (576)
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHH
Confidence            34567899999999999999999999999999999999998887766655431     1   1225677889887554

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.73  E-value=6.4e-08  Score=73.91  Aligned_cols=67  Identities=25%  Similarity=0.394  Sum_probs=48.9

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~-~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++++|+++|||+++|||.+++++|+++|++|++..++ .+...+...++.+. +....++.+|+++..+
T Consensus         3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   70 (252)
T PRK06077          3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN-GGEGIGVLADVSTREG   70 (252)
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc-CCeeEEEEeccCCHHH
Confidence            4678999999999999999999999999998887653 34444444444432 3345567788776543

>PRK06924 short chain dehydrogenase; Provisional

Probab=98.72  E-value=3.6e-08  Score=75.44  Aligned_cols=61  Identities=28%  Similarity=0.489  Sum_probs=47.0

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~-~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      |+++|||+++|||++++++|+++|++|++++|++ +.++    ++.+..+....++.+|+++..++
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~   63 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELT----KLAEQYNSNLTFHSLDLQDVHEL   63 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHH----HHHhccCCceEEEEecCCCHHHH
Confidence            5899999999999999999999999999999987 3333    22233334456778999886543

>PRK06483 dihydromonapterin reductase; Provisional

Probab=98.72  E-value=3e-08  Score=75.44  Aligned_cols=37  Identities=41%  Similarity=0.577  Sum_probs=34.2

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~  116 (147)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+.
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~   38 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYP   38 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchh
Confidence            5789999999999999999999999999999998754

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.72  E-value=7.5e-08  Score=72.87  Aligned_cols=67  Identities=24%  Similarity=0.387  Sum_probs=47.2

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH-HHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~-~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+++|+++|||++++||.++++.|+++|++|++..++.+. .+....++... +....++.+|+.+...
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   70 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL-GRRAQAVQADVTDKAA   70 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc-CCceEEEECCcCCHHH
Confidence            3556799999999999999999999999998886665443 33333333332 3334566777776543

>PRK12827 short chain dehydrogenase; Provisional

Probab=98.71  E-value=5.6e-08  Score=73.90  Aligned_cols=66  Identities=23%  Similarity=0.325  Sum_probs=47.7

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC----ChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR----SAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r----~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      .+++|+++|||+++|||+.+++.|+++|++|++++|    +.+..++..+++... +....++.+|+++..
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~   72 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA-GGKALGLAFDVRDFA   72 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc-CCcEEEEEccCCCHH
Confidence            356789999999999999999999999999999765    334444444444332 334556677777654

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.71  E-value=2.4e-08  Score=74.37  Aligned_cols=64  Identities=20%  Similarity=0.278  Sum_probs=55.1

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .+|-+++||||.+|+|++.+++|+.+|+.|+++|...++.++.++|+    ++..++...|+++|.++
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel----g~~~vf~padvtsekdv   70 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL----GGKVVFTPADVTSEKDV   70 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh----CCceEEeccccCcHHHH
Confidence            46679999999999999999999999999999999888887776665    66678888888887764

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.71  E-value=6.3e-08  Score=74.61  Aligned_cols=67  Identities=18%  Similarity=0.269  Sum_probs=48.1

Q ss_pred             CCCCCEEEEeCCcC--hHHHHHHHHHHHCCCEEEEEeCC-----------hHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           77 MLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRS-----------AERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        77 ~~~~k~~lVTG~s~--GIG~~~a~~La~~Ga~V~i~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      .+++|+++|||+++  |||.++++.|+++|++|++++|+           .....+...++.. .+....++.+|+++..
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~   80 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES-YGVRCEHMEIDLSQPY   80 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHh-cCCeEEEEECCCCCHH
Confidence            45789999999994  99999999999999999999987           2222223333332 2444566788887754


Q ss_pred             C
Q 032110          144 K  144 (147)
Q Consensus       144 ~  144 (147)
                      +
T Consensus        81 ~   81 (256)
T PRK12748         81 A   81 (256)
T ss_pred             H
Confidence            3

>PRK12742 oxidoreductase; Provisional

Probab=98.71  E-value=5e-08  Score=73.95  Aligned_cols=42  Identities=29%  Similarity=0.530  Sum_probs=35.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-ChHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVD  118 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-~~~~~~  118 (147)
                      .+++|+++|||+++|||+++++.|+++|++|+++++ +.+..+
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~   45 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAE   45 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHH
Confidence            367899999999999999999999999999988766 444443

>PRK12367 short chain dehydrogenase; Provisional

Probab=98.70  E-value=2.9e-08  Score=77.00  Aligned_cols=39  Identities=31%  Similarity=0.371  Sum_probs=36.4

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      ..+++|+++|||+++|||.+++++|+++|++|++++|+.
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~   48 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSK   48 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCc
Confidence            457889999999999999999999999999999999986

>PRK06123 short chain dehydrogenase; Provisional

Probab=98.70  E-value=7.1e-08  Score=73.61  Aligned_cols=64  Identities=25%  Similarity=0.359  Sum_probs=47.4

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEe-CChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~-r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +|+++|||+++|||.+++++|+++|++|++.+ ++++..++..+++... +....++.+|+++...
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~   66 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ-GGEALAVAADVADEAD   66 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC-CCcEEEEEeccCCHHH
Confidence            46899999999999999999999999998887 4445555554555432 3335567888887543

>PRK07060 short chain dehydrogenase; Provisional

Probab=98.69  E-value=6.5e-08  Score=73.58  Aligned_cols=45  Identities=31%  Similarity=0.447  Sum_probs=40.0

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      +++++|+++|||+++|||..+++.|+++|++|++++|+.+..++.
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~   49 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRL   49 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            457889999999999999999999999999999999998766544

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=98.68  E-value=6.6e-08  Score=74.24  Aligned_cols=58  Identities=28%  Similarity=0.526  Sum_probs=45.2

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      +++|||+++|||.++++.|+++|++|++++|+++.+++..+++    +....++.+|+++..
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~   59 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL----GDNLYIAQLDVRNRA   59 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----ccceEEEEecCCCHH
Confidence            6899999999999999999999999999999987765544332    223445667776654

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=98.67  E-value=8.9e-08  Score=73.15  Aligned_cols=64  Identities=30%  Similarity=0.287  Sum_probs=49.4

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEe-CChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~-r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .|+++|||+++|||..+++.|+++|++|+++. |+.+.+++..+++.. .+....++.+|+++..+
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~   66 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRA-AGGRACVVAGDVANEAD   66 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-cCCcEEEEEeccCCHHH
Confidence            36899999999999999999999999998764 666666666666644 34446677888887544

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=98.66  E-value=1e-07  Score=72.23  Aligned_cols=62  Identities=24%  Similarity=0.232  Sum_probs=46.3

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      |+++|||+++|||.++++.|+++|++|+++.| +.+..++..+++... +....++.+|++++.
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~   63 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL-GFDFRVVEGDVSSFE   63 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh-CCceEEEEecCCCHH
Confidence            68999999999999999999999999999888 555555544444332 223455677777654

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06482 short chain dehydrogenase; Provisional

Probab=98.66  E-value=7.7e-08  Score=74.88  Aligned_cols=60  Identities=22%  Similarity=0.416  Sum_probs=46.3

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      .|+++||||++|||++++++|+++|++|++++|+++.+++..++    .+....++.+|++|..
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~~~~   61 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKAR----YGDRLWVLQLDVTDSA   61 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----ccCceEEEEccCCCHH
Confidence            36899999999999999999999999999999998765544332    2333456677777654

>PRK06179 short chain dehydrogenase; Provisional

Probab=98.66  E-value=1.8e-07  Score=72.55  Aligned_cols=62  Identities=32%  Similarity=0.395  Sum_probs=47.4

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH-------------------HHHHHHHHHHHhCCeEEEEEccc
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-------------------VDSAVQSLREEFGEQHVVQNVML  139 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~-------------------~~~~~~~l~~~~~~~~~~~~~dv  139 (147)
                      ++|+++||||++|||++++++|+++|++|++.+|+.+.                   .+++++++.+.++..++++++..
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag   82 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAG   82 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence            56799999999999999999999999999999997543                   23444455555666666666654


Q ss_pred             C
Q 032110          140 A  140 (147)
Q Consensus       140 ~  140 (147)
                      .
T Consensus        83 ~   83 (270)
T PRK06179         83 V   83 (270)
T ss_pred             C
Confidence            3

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=98.66  E-value=9.2e-08  Score=72.74  Aligned_cols=63  Identities=21%  Similarity=0.317  Sum_probs=49.9

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEE-EeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i-~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      |+++|||+++|||.+++++|+++|++|++ ..|+.+..++...++... +....++.+|++|..+
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~   65 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA-GGKAFVLQADISDENQ   65 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC-CCeEEEEEccCCCHHH
Confidence            58999999999999999999999999987 467777777666666543 4445677888887654

>PRK07069 short chain dehydrogenase; Validated

Probab=98.65  E-value=8.7e-08  Score=73.15  Aligned_cols=63  Identities=22%  Similarity=0.440  Sum_probs=49.0

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHHHHHHhCC-eEEEEEcccCCCCCc
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGE-QHVVQNVMLAKGMKW  145 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~-~~~~~~~~~~l~~~~~~-~~~~~~~dv~~~~~~  145 (147)
                      ++|||+++|||.++++.|+++|++|++++|+ .+.+++..+++....+. ....+.+|+++.+++
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   66 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQW   66 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHH
Confidence            7999999999999999999999999999998 66666666666544332 334567888876543

>PRK08324 short chain dehydrogenase; Validated

Probab=98.65  E-value=8.3e-08  Score=84.39  Aligned_cols=66  Identities=23%  Similarity=0.294  Sum_probs=53.7

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+.||+++||||++|||+++++.|+++|++|++++|+.+.+++..+++...  ....++.+|++++..
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~--~~v~~v~~Dvtd~~~  484 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP--DRALGVACDVTDEAA  484 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc--CcEEEEEecCCCHHH
Confidence            468899999999999999999999999999999999998877766665433  235567788877543

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.64  E-value=2e-07  Score=74.67  Aligned_cols=38  Identities=24%  Similarity=0.428  Sum_probs=34.1

Q ss_pred             CCCCCCCEEEEeCCc--ChHHHHHHHHHHHCCCEEEEEeC
Q 032110           75 EPMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSR  112 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s--~GIG~~~a~~La~~Ga~V~i~~r  112 (147)
                      ...+.||+++|||++  +|||+++|+.|+++|++|++.++
T Consensus         3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~   42 (299)
T PRK06300          3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTW   42 (299)
T ss_pred             CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEec
Confidence            346789999999996  99999999999999999999763

>PRK05884 short chain dehydrogenase; Provisional

Probab=98.63  E-value=6.8e-08  Score=73.54  Aligned_cols=56  Identities=20%  Similarity=0.303  Sum_probs=43.6

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      .++||||++|||+++++.|+++|++|++.+|+.+++++..+++    .  ..++.+|++++.
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~----~--~~~~~~D~~~~~   57 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL----D--VDAIVCDNTDPA   57 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----c--CcEEecCCCCHH
Confidence            4899999999999999999999999999999988776554443    1  224456666543

>PLN00015 protochlorophyllide reductase

Probab=98.61  E-value=7.2e-08  Score=76.80  Aligned_cols=60  Identities=27%  Similarity=0.358  Sum_probs=48.2

Q ss_pred             EEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           84 LITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        84 lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +|||+++|||++++++|+++| ++|++.+|+.+.+++..+++... +....++.+|+++..+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~d~~~   61 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP-KDSYTVMHLDLASLDS   61 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEEecCCCHHH
Confidence            599999999999999999999 99999999988877776666422 2334567888887554

>PRK05693 short chain dehydrogenase; Provisional

Probab=98.60  E-value=8.7e-08  Score=74.61  Aligned_cols=38  Identities=50%  Similarity=0.625  Sum_probs=34.7

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      |+++||||++|||.++++.|+++|++|++++|+.+.++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~   39 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVE   39 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            68999999999999999999999999999999876543

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=98.60  E-value=1.3e-07  Score=78.68  Aligned_cols=44  Identities=25%  Similarity=0.406  Sum_probs=39.2

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      ..+++|+++||||++|||.+++++|+++|++|++++|+.+++++
T Consensus       174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~  217 (406)
T PRK07424        174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITL  217 (406)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            35678999999999999999999999999999999998776543

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=98.58  E-value=1.4e-07  Score=72.16  Aligned_cols=65  Identities=32%  Similarity=0.406  Sum_probs=50.2

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh------------------HHHHHHHHHHHHHhCCeEEEEEc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA------------------ERVDSAVQSLREEFGEQHVVQNV  137 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~  137 (147)
                      +++++|+++|||+++|||..++++|+++|++|++++|+.                  +..++.++++.+.++..++++++
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~   83 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNA   83 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchhhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            457889999999999999999999999999999998765                  12344455555566666777766


Q ss_pred             ccC
Q 032110          138 MLA  140 (147)
Q Consensus       138 dv~  140 (147)
                      ...
T Consensus        84 ag~   86 (252)
T PRK08220         84 AGI   86 (252)
T ss_pred             CCc
Confidence            543

>PRK07041 short chain dehydrogenase; Provisional

Probab=98.57  E-value=1.3e-07  Score=71.38  Aligned_cols=59  Identities=32%  Similarity=0.522  Sum_probs=47.9

Q ss_pred             EEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           84 LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        84 lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +|||+++|||+++++.|+++|++|++++|+.+.+++..+++..  +....++.+|+++..+
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~   59 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG--GAPVRTAALDITDEAA   59 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--CCceEEEEccCCCHHH
Confidence            5999999999999999999999999999998877766665542  3335677899988654

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=98.56  E-value=2.1e-07  Score=70.71  Aligned_cols=61  Identities=25%  Similarity=0.431  Sum_probs=48.0

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~-~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++|||+++|||.++++.|+++|++|+++++. .+.+++..+++.+. +....++.+|+++..+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~   62 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ-GGNARLLQFDVADRVA   62 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-CCeEEEEEccCCCHHH
Confidence            5899999999999999999999999998865 45566666666554 3446677899988654

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=98.56  E-value=2.7e-07  Score=70.05  Aligned_cols=62  Identities=24%  Similarity=0.288  Sum_probs=44.6

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH-HHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~-~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      |+++|||+++|||..+++.|+++|++|++++|+.. ..++...++.. .+....++.+|+++..
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~   65 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF-TEDQVRLKELDVTDTE   65 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc-cCCeEEEEEcCCCCHH
Confidence            58999999999999999999999999999999854 22222222211 2233556778887754

>PRK07023 short chain dehydrogenase; Provisional

Probab=98.53  E-value=2e-07  Score=71.17  Aligned_cols=57  Identities=26%  Similarity=0.410  Sum_probs=42.4

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +++|||+++|||.++++.|+++|++|++++|+.+..  .    ....+....++.+|+++..+
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~~~~~~~~~~~~D~~~~~~   59 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L----AAAAGERLAEVELDLSDAAA   59 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h----hhccCCeEEEEEeccCCHHH
Confidence            699999999999999999999999999999976431  1    11223334556777776543

>PLN02583 cinnamoyl-CoA reductase

Probab=98.53  E-value=3.4e-07  Score=72.55  Aligned_cols=67  Identities=18%  Similarity=0.184  Sum_probs=47.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH--HHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE--RVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~--~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +-++|+++||||+|+||.+++++|+++|++|+++.|+.+  ..++...++... +....++.+|++|...
T Consensus         3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~-~~~~~~~~~Dl~d~~~   71 (297)
T PLN02583          3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE-EERLKVFDVDPLDYHS   71 (297)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC-CCceEEEEecCCCHHH
Confidence            345779999999999999999999999999999998643  222222333211 2234566789888654

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=98.50  E-value=2.9e-07  Score=70.43  Aligned_cols=57  Identities=32%  Similarity=0.561  Sum_probs=50.1

Q ss_pred             CCc--ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           87 GST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        87 G~s--~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      |++  +|||+++|++|+++|++|++++|+.+++++.++++.++.+..  ++.+|++++.++
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v   59 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESV   59 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHH
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHH
Confidence            555  999999999999999999999999999888888998887754  599999987654

...

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=98.49  E-value=2.8e-07  Score=74.40  Aligned_cols=64  Identities=19%  Similarity=0.056  Sum_probs=46.1

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      +++|+++||||+|+||.++++.|+++|++|++++|+.....+....+..  +....++.+|+++..
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~   65 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL--AKKIEDHFGDIRDAA   65 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh--cCCceEEEccCCCHH
Confidence            4678999999999999999999999999999999887644333222211  222334567776644

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK08177 short chain dehydrogenase; Provisional

Probab=98.49  E-value=2.4e-07  Score=70.13  Aligned_cols=38  Identities=26%  Similarity=0.479  Sum_probs=34.9

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      |+++|||+++|||.++++.|+++|++|++++|+++..+
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~   39 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDT   39 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchH
Confidence            68999999999999999999999999999999876544

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.49  E-value=6.4e-07  Score=67.87  Aligned_cols=63  Identities=25%  Similarity=0.320  Sum_probs=48.7

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH------------HHHHHHHHHHhCCeEEEEEccc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV------------DSAVQSLREEFGEQHVVQNVML  139 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~------------~~~~~~l~~~~~~~~~~~~~dv  139 (147)
                      .+++|+++|||+++|||.++++.|+++|++|++++|+....            ...++++.+.++..++++++..
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag   76 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLSGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAG   76 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccccCCcEEEEECChHHHHHHHHHhhCCCCEEEECCC
Confidence            46789999999999999999999999999999999864321            1113555556677777777765

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=98.49  E-value=4.3e-07  Score=72.34  Aligned_cols=67  Identities=16%  Similarity=0.057  Sum_probs=48.2

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHh-CCeEEEEEcccCCCCCc
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF-GEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~~~dv~~~~~~  145 (147)
                      .+|+++||||+|+||.+++++|+++|++|+++.|+.+..++....+.... .....++.+|+++...+
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~   71 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSF   71 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHH
Confidence            46899999999999999999999999999999888765544322111111 12345677888876543

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=98.46  E-value=3.9e-07  Score=73.18  Aligned_cols=64  Identities=20%  Similarity=0.167  Sum_probs=47.1

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +++|+++||||+|+||.++++.|+++|  ++|++++|+.....+...++.   .....++.+|++|...
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~   67 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP---APCLRFFIGDVRDKER   67 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC---CCcEEEEEccCCCHHH
Confidence            468899999999999999999999986  789999988665433322221   1234567788887543

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=98.45  E-value=7.9e-07  Score=70.84  Aligned_cols=68  Identities=18%  Similarity=0.060  Sum_probs=48.2

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHH-hCCeEEEEEcccCCCCCc
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE-FGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~-~~~~~~~~~~dv~~~~~~  145 (147)
                      ..||+++||||+|+||..++++|+++|++|+++.|+.+..+......... ......++.+|+++...+
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~   71 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSF   71 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchH
Confidence            45789999999999999999999999999999988876544332211111 112345567888776543

>PRK08017 oxidoreductase; Provisional

Probab=98.45  E-value=4e-07  Score=69.74  Aligned_cols=39  Identities=36%  Similarity=0.543  Sum_probs=35.6

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      |+++|||+++|||.++++.|+++|++|++++|+.++++.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~   41 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVAR   41 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHH
Confidence            689999999999999999999999999999999876543

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=98.44  E-value=7.6e-07  Score=69.89  Aligned_cols=63  Identities=21%  Similarity=0.331  Sum_probs=53.3

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-----EEEEEeCChHHHHHHHHHHHHHhCCe---EEEEEcccCC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-----NVIICSRSAERVDSAVQSLREEFGEQ---HVVQNVMLAK  141 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-----~V~i~~r~~~~~~~~~~~l~~~~~~~---~~~~~~dv~~  141 (147)
                      ..|+++|||+++|||++++.+|.+...     ++++++|+-++.++.+.++.+-+++.   ..++.+|+++
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sN   72 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSN   72 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhh
Confidence            357999999999999999999997653     47788999999999999999988843   4567888876

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.44  E-value=9e-07  Score=68.33  Aligned_cols=69  Identities=22%  Similarity=0.402  Sum_probs=59.9

Q ss_pred             CCCCCCEEEEeCC--cChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCcc
Q 032110           76 PMLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKWQ  146 (147)
Q Consensus        76 ~~~~~k~~lVTG~--s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~~  146 (147)
                      ..|+||+++|+|-  .++|+..||+.|.++|+++++++.++ ++++-++++.++.+. ..+++|||+++++++
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s-~~v~~cDV~~d~~i~   72 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGS-DLVLPCDVTNDESID   72 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccC-CeEEecCCCCHHHHH
Confidence            3689999999994  48999999999999999999999887 788888888887766 678999999987653

>PRK08219 short chain dehydrogenase; Provisional

Probab=98.44  E-value=4.8e-07  Score=67.91  Aligned_cols=59  Identities=31%  Similarity=0.418  Sum_probs=44.7

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .|+++||||+++||+.+++.|+++ ++|++++|+.+..++..++.    .. ..++.+|++|...
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~D~~~~~~   61 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----PG-ATPFPVDLTDPEA   61 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----cc-ceEEecCCCCHHH
Confidence            468999999999999999999999 99999999987655433221    12 3456777776443

>PRK06953 short chain dehydrogenase; Provisional

Probab=98.43  E-value=5.6e-07  Score=67.98  Aligned_cols=56  Identities=25%  Similarity=0.371  Sum_probs=43.1

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      |+++|||+++|||.++++.|+++|++|++++|+.+..++..    .. +  ..++.+|+++..
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~~-~--~~~~~~D~~~~~   57 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----AL-G--AEALALDVADPA   57 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----hc-c--ceEEEecCCCHH
Confidence            58999999999999999999999999999999977654332    11 1  234567776654

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=98.42  E-value=1.5e-06  Score=71.80  Aligned_cols=43  Identities=26%  Similarity=0.393  Sum_probs=37.5

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~  117 (147)
                      ....++++++||||+|+||..++++|+++|++|++++|+.+..
T Consensus        55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~   97 (390)
T PLN02657         55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGI   97 (390)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhc
Confidence            3345677999999999999999999999999999999987543

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=98.42  E-value=8.4e-07  Score=71.76  Aligned_cols=63  Identities=22%  Similarity=0.199  Sum_probs=47.1

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      .+++++||||+|+||..++++|+++|++|++++|+.+..+....++..  +....++.+|+++..
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~   71 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE--GDRLRLFRADLQEEG   71 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc--CCeEEEEECCCCCHH
Confidence            456899999999999999999999999999999987665544433321  223445667777643

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=98.41  E-value=4e-07  Score=73.26  Aligned_cols=63  Identities=21%  Similarity=0.112  Sum_probs=43.4

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH-----HHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-----VDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      |+++||||+|+||..++++|+++|++|++++|+.+.     ++...++.....+....++.+|++|..
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   68 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSS   68 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHH
Confidence            589999999999999999999999999999987542     111111111111223456678887754

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02240 UDP-glucose 4-epimerase

Probab=98.40  E-value=9.6e-07  Score=70.93  Aligned_cols=67  Identities=24%  Similarity=0.334  Sum_probs=45.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHH---hCCeEEEEEcccCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE---FGEQHVVQNVMLAKGM  143 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~---~~~~~~~~~~dv~~~~  143 (147)
                      +|.+|+++||||+|+||..+++.|+++|++|++++|......+....+...   .+....++.+|+++..
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   71 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKE   71 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHH
Confidence            567889999999999999999999999999999987543222211222111   1222345667777644

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.39  E-value=1.2e-06  Score=64.97  Aligned_cols=63  Identities=24%  Similarity=0.368  Sum_probs=48.7

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCCh---HHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           82 NVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA---ERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~---~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +++||||.+|||..+++.|+++| .+|+++.|+.   ...++..+++.+. +....++.+|++|..++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~-g~~v~~~~~Dv~d~~~v   68 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA-GARVEYVQCDVTDPEAV   68 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT-T-EEEEEE--TTSHHHH
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC-CCceeeeccCccCHHHH
Confidence            78999999999999999999998 5799999983   2345567777765 55678889999986543

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=98.39  E-value=1e-06  Score=66.47  Aligned_cols=61  Identities=31%  Similarity=0.465  Sum_probs=46.3

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~-~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++|||++++||..+++.|+++|++|++++|+. +..++...++... +....++.+|++++.+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   62 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY-GVKALGVVCDVSDRED   62 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc-CCceEEEEecCCCHHH
Confidence            58999999999999999999999999998875 4444444445433 3345677888887654

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PLN02214 cinnamoyl-CoA reductase

Probab=98.38  E-value=1.5e-06  Score=70.39  Aligned_cols=67  Identities=18%  Similarity=0.114  Sum_probs=48.1

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH-HHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA-VQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~-~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +++|+++||||+|+||..++++|+++|++|++++|+.+..... ..++.. ......++.+|+++..++
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~   75 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG-GKERLILCKADLQDYEAL   75 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC-CCCcEEEEecCcCChHHH
Confidence            4577999999999999999999999999999999987643321 222221 112245667888875543

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=98.38  E-value=1e-06  Score=71.26  Aligned_cols=67  Identities=19%  Similarity=0.138  Sum_probs=53.2

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH--HHHHHHHHhCCeEEEEEcccCCCCCcc
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS--AVQSLREEFGEQHVVQNVMLAKGMKWQ  146 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~--~~~~l~~~~~~~~~~~~~dv~~~~~~~  146 (147)
                      .+++++|||++|.||..+++.|+++||.|..+.|+++..+.  .+.++.....+ ..++..|+.++..++
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~-l~l~~aDL~d~~sf~   73 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKER-LKLFKADLLDEGSFD   73 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCccc-ceEEeccccccchHH
Confidence            56799999999999999999999999999999999987443  34445433223 678889998876553

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.37  E-value=1.3e-06  Score=65.27  Aligned_cols=62  Identities=27%  Similarity=0.285  Sum_probs=50.8

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAK  141 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~  141 (147)
                      .++.|+++++||+..|||+++++.|+..|++|+...|+++.+..+++|.    +....-+.+|+.+
T Consensus         3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~----p~~I~Pi~~Dls~   64 (245)
T KOG1207|consen    3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET----PSLIIPIVGDLSA   64 (245)
T ss_pred             ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC----CcceeeeEecccH
Confidence            3578999999999999999999999999999999999999888776653    3334445566654

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.37  E-value=1e-06  Score=72.83  Aligned_cols=67  Identities=21%  Similarity=0.195  Sum_probs=47.4

Q ss_pred             CCCCEEEEeCCcChHHHH--HHHHHHHCCCEEEEEeCChHHHH-----------HHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           78 LPPYNVLITGSTKGIGYA--LAKEFLKAGDNVIICSRSAERVD-----------SAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~--~a~~La~~Ga~V~i~~r~~~~~~-----------~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ..+|+++|||+++|||++  ++++| ++|++|+++++..+..+           +..++..+..+.....+++|+++++.
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            357899999999999999  89999 99999888875332211           12233333445445678999998654


Q ss_pred             c
Q 032110          145 W  145 (147)
Q Consensus       145 ~  145 (147)
                      +
T Consensus       118 v  118 (398)
T PRK13656        118 K  118 (398)
T ss_pred             H
Confidence            3

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.36  E-value=8.2e-07  Score=68.20  Aligned_cols=41  Identities=49%  Similarity=0.697  Sum_probs=34.1

Q ss_pred             CCEEEEeCCc-ChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           80 PYNVLITGST-KGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        80 ~k~~lVTG~s-~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .|+++|||++ ||||.+++++|++.|+.|+.+.|+.+...++
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L   48 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQL   48 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhH
Confidence            4678888765 8999999999999999999999987654433

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=98.36  E-value=1.4e-06  Score=69.05  Aligned_cols=66  Identities=20%  Similarity=0.123  Sum_probs=46.5

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHH--hCCeEEEEEcccCCCCCc
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE--FGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~--~~~~~~~~~~dv~~~~~~  145 (147)
                      ++|+++||||+|+||..++++|+++|++|++++|+.+..... ..+...  ......++.+|+++...|
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~   70 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKT-EHLLALDGAKERLHLFKANLLEEGSF   70 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhH-HHHHhccCCCCceEEEeccccCcchH
Confidence            467899999999999999999999999999999886543322 122111  112345667888775543

>PRK07577 short chain dehydrogenase; Provisional

Probab=98.35  E-value=4.2e-06  Score=63.23  Aligned_cols=61  Identities=31%  Similarity=0.391  Sum_probs=45.5

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH----------------HHHHHHHHHHHhCCeEEEEEcccC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER----------------VDSAVQSLREEFGEQHVVQNVMLA  140 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~----------------~~~~~~~l~~~~~~~~~~~~~dv~  140 (147)
                      .+|+++|||+++|||+.+++.|+++|++|++++|+.+.                .++.++++.+.+ +.+.++++...
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~   78 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDFPGELFACDLADIEQTAATLAQINEIH-PVDAIVNNVGI   78 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccccCceEEEeeCCCHHHHHHHHHHHHHhC-CCcEEEECCCC
Confidence            57899999999999999999999999999999886432                233444444444 35666666544

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.34  E-value=1.4e-06  Score=72.70  Aligned_cols=37  Identities=30%  Similarity=0.470  Sum_probs=34.4

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      .+++|+++|||+++|||.++++.|+++|++|+++++.
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~  243 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVP  243 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4678999999999999999999999999999999884

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.34  E-value=1.1e-06  Score=62.51  Aligned_cols=62  Identities=27%  Similarity=0.396  Sum_probs=43.7

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHH---HHHHHHHhCCeEEEEEcccCCCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSA---VQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~---~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      |+++|||+++|||.++++.|+++|+ .|++.+|+.+..++.   .+++.. .+....++.+|+++..
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~   66 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEA-LGAEVTVVACDVADRA   66 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHh-cCCeEEEEECCCCCHH
Confidence            5789999999999999999999996 688888876543322   233332 2334456677777643

It uses NADPH to reduce the keto group to a hydroxy group.

>PLN02686 cinnamoyl-CoA reductase

Probab=98.34  E-value=2.2e-06  Score=70.14  Aligned_cols=68  Identities=16%  Similarity=0.125  Sum_probs=49.6

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHh-----CCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF-----GEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~dv~~~~~  144 (147)
                      ...++|+++||||+|+||..+++.|+++|++|+++.|+.+..++. .++....     .....++.+|++|...
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~  121 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPES  121 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHH
Confidence            356788999999999999999999999999999988887655443 2332110     1124567788887553

>PLN02572 UDP-sulfoquinovose synthase

Probab=98.34  E-value=2.3e-06  Score=71.82  Aligned_cols=36  Identities=25%  Similarity=0.285  Sum_probs=33.0

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR  112 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r  112 (147)
                      .+++|+++||||+|+||..++++|+++|++|+++++
T Consensus        44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~   79 (442)
T PLN02572         44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDN   79 (442)
T ss_pred             cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEec
Confidence            466789999999999999999999999999999874

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.31  E-value=2.2e-06  Score=73.48  Aligned_cols=68  Identities=28%  Similarity=0.317  Sum_probs=59.4

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHHHhCCe-EEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQ-HVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~~~~l~~~~~~~-~~~~~~dv~~~~~  144 (147)
                      .+.||+++||||+|.||.++++++++.+ .++++.++++-++.....++...++.. ...+.+|+.|...
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~  316 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDR  316 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHH
Confidence            4799999999999999999999999999 569999999999999999999887744 5667899988654

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.31  E-value=2.7e-06  Score=63.34  Aligned_cols=61  Identities=13%  Similarity=0.132  Sum_probs=47.3

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +++||||+ |+|.++++.|+++|++|++.+|+.+..++....+..  ......+.+|+.|..++
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~--~~~i~~~~~Dv~d~~sv   62 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT--PESITPLPLDYHDDDAL   62 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc--CCcEEEEEccCCCHHHH
Confidence            68999998 788889999999999999999998776665544432  33455678899886543

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=98.29  E-value=1.1e-06  Score=70.56  Aligned_cols=39  Identities=31%  Similarity=0.203  Sum_probs=35.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      ++++|+++||||+|+||.+++++|+++|++|++++|+.+
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~   41 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSS   41 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence            467889999999999999999999999999999988654

>PLN00198 anthocyanidin reductase; Provisional

Probab=98.27  E-value=3.2e-06  Score=67.87  Aligned_cols=65  Identities=20%  Similarity=0.196  Sum_probs=45.0

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH--HHHHHHhCCeEEEEEcccCCCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV--QSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~--~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +.+++++||||+|+||..++++|+++|++|+++.|+.+......  ..+. ..+ ...++.+|++|...
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~-~~~~~~~Dl~d~~~   73 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQ-ELG-DLKIFGADLTDEES   73 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcC-CCC-ceEEEEcCCCChHH
Confidence            34678999999999999999999999999998888764432221  1111 111 23456777776543

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.25  E-value=2.1e-06  Score=68.88  Aligned_cols=61  Identities=30%  Similarity=0.379  Sum_probs=52.9

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCe-EEEEEcccCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ-HVVQNVMLAK  141 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~-~~~~~~dv~~  141 (147)
                      +.++||||++|||+++|.++..+|++|.++.|+.++++++++++.-..... +.+..+|+.|
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~   95 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVID   95 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEecccccc
Confidence            489999999999999999999999999999999999999999987665544 4456777755

>PLN02650 dihydroflavonol-4-reductase

Probab=98.24  E-value=3.7e-06  Score=67.89  Aligned_cols=66  Identities=21%  Similarity=0.136  Sum_probs=46.6

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHH-hCCeEEEEEcccCCCCC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE-FGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~-~~~~~~~~~~dv~~~~~  144 (147)
                      ..|+++||||+|.||..++++|+++|++|++++|+.+..++....+... ......++..|+++...
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~   70 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGS   70 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhh
Confidence            4568999999999999999999999999999999876554432211110 01124566778877543

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.23  E-value=4.5e-06  Score=66.53  Aligned_cols=52  Identities=15%  Similarity=0.284  Sum_probs=42.9

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCE-EEEEeCCh---HHHHHHHHHHHHHhC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSA---ERVDSAVQSLREEFG  129 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~-V~i~~r~~---~~~~~~~~~l~~~~~  129 (147)
                      .+++|+++|+|+ ||+|++++..|++.|++ |++++|+.   +++++..+++.+.++
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~  178 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVP  178 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCC
Confidence            467899999998 69999999999999986 99999997   667777776654433

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=98.22  E-value=3.2e-06  Score=65.14  Aligned_cols=66  Identities=29%  Similarity=0.437  Sum_probs=47.0

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHC-CCEEEE-EeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKA-GDNVII-CSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~-Ga~V~i-~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ..|.++||||.+|||+.++++|... |-.+++ .+|+.++..+..+++ .......+++++|++.++++
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k-~~~d~rvHii~Ldvt~deS~   69 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALK-SKSDSRVHIIQLDVTCDESI   69 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHh-hccCCceEEEEEecccHHHH
Confidence            3457999999999999999999864 455544 567787763332332 23355578999999987654

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=98.21  E-value=3.5e-06  Score=67.59  Aligned_cols=67  Identities=25%  Similarity=0.231  Sum_probs=54.7

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ....+|.++|||+-+|+|+.+|+.|.++|..|+..+.+++..+++..+..   ......+++||++++++
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~---s~rl~t~~LDVT~~esi   91 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK---SPRLRTLQLDVTKPESV   91 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc---CCcceeEeeccCCHHHH
Confidence            34678899999999999999999999999999999988777666655543   33355669999998765

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.19  E-value=1.6e-05  Score=59.43  Aligned_cols=51  Identities=27%  Similarity=0.391  Sum_probs=45.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE  127 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~  127 (147)
                      ++++++++|.|++|++|+.+++.|++.|++|++++|+.+++++..+++.+.
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~   75 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRAR   75 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhh
Confidence            567889999999999999999999999999999999998888877766543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=98.18  E-value=6.8e-06  Score=63.44  Aligned_cols=59  Identities=14%  Similarity=0.266  Sum_probs=44.1

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAK  141 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~  141 (147)
                      ..+++++|||++|+||+.++++|++.|++|+++.|+.+...+...    . +....++.+|+.+
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~-~~~~~~~~~Dl~d   73 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----Q-DPSLQIVRADVTE   73 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----c-CCceEEEEeeCCC
Confidence            456789999999999999999999999999999998766443211    1 1124455667665

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.18  E-value=4.6e-06  Score=82.04  Aligned_cols=36  Identities=31%  Similarity=0.433  Sum_probs=33.5

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHC-CCEEEEEeCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRS  113 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~-Ga~V~i~~r~  113 (147)
                      -++++++||||++|||.+++++|+++ |++|++++|+
T Consensus      1995 ~~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs 2031 (2582)
T TIGR02813      1995 NSDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRS 2031 (2582)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence            35889999999999999999999998 6999999998

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=98.12  E-value=7.1e-06  Score=65.52  Aligned_cols=62  Identities=19%  Similarity=0.261  Sum_probs=40.8

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      +++||||+|+||..+++.|+++|++|++++|...........+....+....++.+|++|..
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   63 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEA   63 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHH
Confidence            58999999999999999999999999998764332222222222211222345566766543

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=98.11  E-value=3.5e-06  Score=67.33  Aligned_cols=61  Identities=25%  Similarity=0.377  Sum_probs=47.6

Q ss_pred             EEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHHHhCC--e---EEEEEcccCCCC
Q 032110           83 VLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGE--Q---HVVQNVMLAKGM  143 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~~~~l~~~~~~--~---~~~~~~dv~~~~  143 (147)
                      ++||||+|.||.+++++|++.+ .+|+++++++..+.+...++...++.  .   ...+.+|+.|..
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~   67 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKE   67 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHH
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHH
Confidence            6899999999999999999999 67999999999999998888765543  2   234567887754

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=98.11  E-value=6.4e-06  Score=66.66  Aligned_cols=40  Identities=33%  Similarity=0.316  Sum_probs=35.7

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      ..+++|.++||||+|.||..++++|.++|++|++++|...
T Consensus        11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~   50 (348)
T PRK15181         11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFST   50 (348)
T ss_pred             ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            3467789999999999999999999999999999998543

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=98.08  E-value=1e-05  Score=59.15  Aligned_cols=52  Identities=27%  Similarity=0.326  Sum_probs=42.2

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      ++|+||+|.+|..++++|.++|++|+++.|++++.++         .....++.+|+.|..
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---------~~~~~~~~~d~~d~~   52 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---------SPGVEIIQGDLFDPD   52 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---------CTTEEEEESCTTCHH
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---------ccccccceeeehhhh
Confidence            6899999999999999999999999999999987665         222445566666543

...

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.07  E-value=2.1e-05  Score=65.52  Aligned_cols=66  Identities=20%  Similarity=0.295  Sum_probs=50.2

Q ss_pred             CCCCCCEEEEeCC----------------cChHHHHHHHHHHHCCCEEEEEeCChH-------------HHHHHHHHHHH
Q 032110           76 PMLPPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSRSAE-------------RVDSAVQSLRE  126 (147)
Q Consensus        76 ~~~~~k~~lVTG~----------------s~GIG~~~a~~La~~Ga~V~i~~r~~~-------------~~~~~~~~l~~  126 (147)
                      .+++||+++||||                +|++|+++|++|+++|++|++++++.+             ..++..+.+.+
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~~~~~~~~~dv~~~~~~~~~v~~  263 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLPTPAGVKRIDVESAQEMLDAVLA  263 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccccCCCCcEEEccCCHHHHHHHHHH
Confidence            3578999999999                555999999999999999999876531             23445555666


Q ss_pred             HhCCeEEEEEcccCC
Q 032110          127 EFGEQHVVQNVMLAK  141 (147)
Q Consensus       127 ~~~~~~~~~~~dv~~  141 (147)
                      .++..++++++....
T Consensus       264 ~~~~~DilI~~Aav~  278 (399)
T PRK05579        264 ALPQADIFIMAAAVA  278 (399)
T ss_pred             hcCCCCEEEEccccc
Confidence            677778888766543

>PLN02427 UDP-apiose/xylose synthase

Probab=98.03  E-value=1.1e-05  Score=66.05  Aligned_cols=40  Identities=15%  Similarity=0.352  Sum_probs=34.1

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHC-CCEEEEEeCChHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERV  117 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~-Ga~V~i~~r~~~~~  117 (147)
                      .+.++++||||+|.||..+++.|+++ |++|++++|+.+..
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~   52 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKI   52 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhh
Confidence            34457999999999999999999998 58999999876543

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=97.94  E-value=1.5e-05  Score=60.44  Aligned_cols=34  Identities=35%  Similarity=0.510  Sum_probs=28.0

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCC--CEEEEEeCCh
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSA  114 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~~  114 (147)
                      ++++|||+++|||++++++|+++|  ..|++.+|+.
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~   36 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHH   36 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCC
Confidence            368999999999999999999985  5666666643

>PRK07578 short chain dehydrogenase; Provisional

Probab=97.89  E-value=3.9e-05  Score=56.88  Aligned_cols=58  Identities=28%  Similarity=0.418  Sum_probs=42.9

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH------HHHHHHHHHHhCCeEEEEEcccC
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV------DSAVQSLREEFGEQHVVQNVMLA  140 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~------~~~~~~l~~~~~~~~~~~~~dv~  140 (147)
                      +++|||+++|||.++++.|+++ ++|++.+|+.+..      .+.++++.+..+..+.++++...
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~   65 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSGDVQVDITDPASIRALFEKVGKVDAVVSAAGK   65 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCCceEecCCChHHHHHHHHhcCCCCEEEECCCC
Confidence            6899999999999999999999 9999998865311      12233444445677777776654

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.85  E-value=9.3e-05  Score=60.44  Aligned_cols=64  Identities=25%  Similarity=0.333  Sum_probs=50.9

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHC-C-CEEEEEeCChHHHHHHHHHHH--------HHhCCeEEEEEcccC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKA-G-DNVIICSRSAERVDSAVQSLR--------EEFGEQHVVQNVMLA  140 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~-G-a~V~i~~r~~~~~~~~~~~l~--------~~~~~~~~~~~~dv~  140 (147)
                      ++.+|+++|||++|.||..+++.|+.+ | .++++++|+.+++++..+++.        +.....++++++...
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~~l~~~l~~aDiVv~~ts~  225 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKILSLEEALPEADIVVWVASM  225 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHHhHHHHHccCCEEEECCcC
Confidence            588999999999999999999999864 5 589999999888877766654        445556666666544

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=97.84  E-value=3.5e-05  Score=62.26  Aligned_cols=64  Identities=22%  Similarity=0.255  Sum_probs=48.5

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhC--CeEEEEEcccCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG--EQHVVQNVMLAKGM  143 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~--~~~~~~~~dv~~~~  143 (147)
                      ++.++||||+|-||.+++.+|.++|+.|+++|.=.....+....++...+  +...+++.|++|.+
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~   67 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAE   67 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHH
Confidence            46899999999999999999999999999987533333333333333333  66788899998854

>CHL00194 ycf39 Ycf39; Provisional

Probab=97.83  E-value=4.6e-05  Score=60.84  Aligned_cols=36  Identities=22%  Similarity=0.405  Sum_probs=33.1

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~  117 (147)
                      +++||||+|.||..++++|.++|++|.+++|+.+..
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~   37 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKA   37 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHh
Confidence            589999999999999999999999999999986543

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=97.82  E-value=2.4e-05  Score=63.01  Aligned_cols=33  Identities=24%  Similarity=0.432  Sum_probs=28.1

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEE-EEeCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVI-ICSRS  113 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~-i~~r~  113 (147)
                      |+++||||+|+||.++++.|.++|++++ +.++.
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~   35 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKL   35 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecC
Confidence            4799999999999999999999998744 45554

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.78  E-value=0.00011  Score=52.11  Aligned_cols=47  Identities=26%  Similarity=0.419  Sum_probs=42.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSL  124 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~-V~i~~r~~~~~~~~~~~l  124 (147)
                      ++++|.++|-| +||.|++++..|+..|++ |+++.|+.++++++++++
T Consensus         9 ~l~~~~vlviG-aGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~   56 (135)
T PF01488_consen    9 DLKGKRVLVIG-AGGAARAVAAALAALGAKEITIVNRTPERAEALAEEF   56 (135)
T ss_dssp             TGTTSEEEEES-SSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH
T ss_pred             CcCCCEEEEEC-CHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc
Confidence            57899999999 599999999999999976 999999999988887776

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=97.77  E-value=2.7e-05  Score=61.54  Aligned_cols=35  Identities=31%  Similarity=0.516  Sum_probs=32.5

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~  116 (147)
                      +++|||++|+||..+++.|+++|++|++++|+.+.
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~   36 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSD   36 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcc
Confidence            68999999999999999999999999999997654

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=97.73  E-value=0.00016  Score=57.66  Aligned_cols=34  Identities=38%  Similarity=0.500  Sum_probs=31.0

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCC--CEEEEEeCChH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAE  115 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~~~  115 (147)
                      +++|||++|+||..++++|+++|  ++|+++.|+.+
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~   36 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAAS   36 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCC
Confidence            47999999999999999999999  78999999765

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=97.71  E-value=5.6e-05  Score=59.40  Aligned_cols=32  Identities=25%  Similarity=0.526  Sum_probs=29.1

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      ++||||+|+||..+++.|.++|++|++.++..
T Consensus         2 vlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~   33 (328)
T TIGR01179         2 ILVTGGAGYIGSHTVRQLLESGHEVVVLDNLS   33 (328)
T ss_pred             EEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            78999999999999999999999998887643

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.70  E-value=0.00024  Score=56.24  Aligned_cols=48  Identities=25%  Similarity=0.387  Sum_probs=42.4

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLR  125 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~~~~l~  125 (147)
                      .+.+|.++|.|+ ||+|+++++.|+..| .+|++++|+.++.+++.+++.
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            577889999985 999999999999999 789999999998887776664

>PLN02778 3,5-epimerase/4-reductase

Probab=97.66  E-value=0.00027  Score=56.27  Aligned_cols=58  Identities=24%  Similarity=0.109  Sum_probs=41.5

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLA  140 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~  140 (147)
                      ++++||||+|.||..++++|.++|++|++...+....+.....+..  .+.++++|+...
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~~--~~~D~ViH~Aa~   67 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEADIDA--VKPTHVFNAAGV   67 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCCHHHHHHHHHh--cCCCEEEECCcc
Confidence            4799999999999999999999999998665444333333333432  234677777653

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=97.58  E-value=6.5e-05  Score=58.35  Aligned_cols=58  Identities=31%  Similarity=0.334  Sum_probs=42.1

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH---------HHHHHHhCCeEEEEEcccC
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV---------QSLREEFGEQHVVQNVMLA  140 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~---------~~l~~~~~~~~~~~~~dv~  140 (147)
                      ++|||++|.||..+++.|+++|++|++++|+.+......         ..+.....+.+.++++...
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vvh~a~~   67 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEGYKPWAPLAESEALEGADAVINLAGE   67 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccceeeecccccchhhhcCCCCEEEECCCC
Confidence            589999999999999999999999999999876432211         1122334455677776653

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.56  E-value=0.00024  Score=61.17  Aligned_cols=47  Identities=28%  Similarity=0.378  Sum_probs=41.4

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l  124 (147)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            467899999997 69999999999999999999999988887776554

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.53  E-value=0.0004  Score=57.73  Aligned_cols=65  Identities=22%  Similarity=0.284  Sum_probs=45.0

Q ss_pred             CCCCCEEEEeCC---------------cCh-HHHHHHHHHHHCCCEEEEEeCChH-------------HHHHHHHHHH-H
Q 032110           77 MLPPYNVLITGS---------------TKG-IGYALAKEFLKAGDNVIICSRSAE-------------RVDSAVQSLR-E  126 (147)
Q Consensus        77 ~~~~k~~lVTG~---------------s~G-IG~~~a~~La~~Ga~V~i~~r~~~-------------~~~~~~~~l~-~  126 (147)
                      +++||.++||||               ++| +|.+++++|..+|++|+++++..+             ..++..+.+. +
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~  261 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLTPPGVKSIKVSTAEEMLEAALNE  261 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCCCCCcEEEEeccHHHHHHHHHHh
Confidence            488999999999               556 999999999999999998765321             2233323333 3


Q ss_pred             HhCCeEEEEEcccCC
Q 032110          127 EFGEQHVVQNVMLAK  141 (147)
Q Consensus       127 ~~~~~~~~~~~dv~~  141 (147)
                      ..++.++++++....
T Consensus       262 ~~~~~D~~i~~Aavs  276 (390)
T TIGR00521       262 LAKDFDIFISAAAVA  276 (390)
T ss_pred             hcccCCEEEEccccc
Confidence            345556666655443

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=97.53  E-value=0.00079  Score=56.63  Aligned_cols=36  Identities=22%  Similarity=0.407  Sum_probs=32.4

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      +.++++||||+|.||..++++|+++|++|++++|..
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~  154 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFF  154 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            345799999999999999999999999999998753

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=97.52  E-value=0.0002  Score=53.76  Aligned_cols=33  Identities=52%  Similarity=0.746  Sum_probs=29.7

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      ++||||+|.||.+++++|.++|+.|+.+.|+..
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~   33 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSN   33 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCST
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccc
Confidence            689999999999999999999999887777654

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=97.50  E-value=0.0002  Score=57.53  Aligned_cols=33  Identities=30%  Similarity=0.536  Sum_probs=30.5

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      .++||||+|-||..++.+|++.|++|+++|.-.
T Consensus         2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~   34 (329)
T COG1087           2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLS   34 (329)
T ss_pred             eEEEecCcchhHHHHHHHHHHCCCeEEEEecCC
Confidence            689999999999999999999999999998643

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.48  E-value=0.00047  Score=57.62  Aligned_cols=48  Identities=31%  Similarity=0.434  Sum_probs=39.1

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLR  125 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~-~~~~~~~~~l~  125 (147)
                      ++++|+++|+|+++ +|.++|+.|+++|++|++++++. +.+++..+++.
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~   50 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELG   50 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH
Confidence            46789999999766 99999999999999999999985 44554455553

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=97.47  E-value=0.00018  Score=56.29  Aligned_cols=32  Identities=25%  Similarity=0.417  Sum_probs=28.3

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCC--CEEEEEeCC
Q 032110           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRS  113 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~  113 (147)
                      .++||||+|+||.+++++|++.|  ++|++.+|.
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~   34 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKL   34 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCC
Confidence            37999999999999999999987  788888763

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02206 UDP-glucuronate decarboxylase

Probab=97.45  E-value=0.00044  Score=58.22  Aligned_cols=37  Identities=24%  Similarity=0.381  Sum_probs=33.4

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      -++++++||||+|.||..++++|.++|++|+++++..
T Consensus       117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~  153 (442)
T PLN02206        117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFF  153 (442)
T ss_pred             cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCC
Confidence            4667899999999999999999999999999988653

>PLN00016 RNA-binding protein; Provisional

Probab=97.44  E-value=0.00031  Score=57.50  Aligned_cols=38  Identities=42%  Similarity=0.595  Sum_probs=34.2

Q ss_pred             CCCEEEEe----CCcChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110           79 PPYNVLIT----GSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (147)
Q Consensus        79 ~~k~~lVT----G~s~GIG~~~a~~La~~Ga~V~i~~r~~~~  116 (147)
                      ..+.++||    ||+|.||..+++.|+++|++|++++|+.+.
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~   92 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEP   92 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcc
Confidence            34679999    999999999999999999999999998754

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=97.43  E-value=0.00012  Score=57.22  Aligned_cols=34  Identities=26%  Similarity=0.373  Sum_probs=31.9

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~  116 (147)
                      ++|||++|.+|..++++|.+.|++|.++.|+.+.
T Consensus         2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~   35 (285)
T TIGR03649         2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSSS   35 (285)
T ss_pred             EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcc
Confidence            7999999999999999999999999999998753

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=97.43  E-value=0.00035  Score=53.68  Aligned_cols=40  Identities=30%  Similarity=0.459  Sum_probs=36.3

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      .++|||++|.+|..++++|.++|++|.+..|+.+......
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~   41 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA   41 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc
Confidence            5899999999999999999999999999999988766543

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=97.42  E-value=0.00041  Score=55.88  Aligned_cols=36  Identities=31%  Similarity=0.296  Sum_probs=31.6

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHC-CCEEEEEeCChHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAER  116 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~-Ga~V~i~~r~~~~  116 (147)
                      ++++|||++|.||..++++|++. |++|++++|+.+.
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~   38 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDR   38 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHH
Confidence            36999999999999999999986 6999999987643

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=97.40  E-value=0.00032  Score=55.67  Aligned_cols=59  Identities=29%  Similarity=0.391  Sum_probs=45.9

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH-------HHHHHHhC-CeEEEEEcccCC
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV-------QSLREEFG-EQHVVQNVMLAK  141 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~-------~~l~~~~~-~~~~~~~~dv~~  141 (147)
                      ++||||+|-||.+++.+|.+.|++|+++.|++.+.+...       +.+..... ..++++|+.+..
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~~~~~~~~~~~~~~DavINLAG~~   67 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVTLWEGLADALTLGIDAVINLAGEP   67 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCccccccchhhhcccCCCCEEEECCCCc
Confidence            589999999999999999999999999999887654322       22333222 478899988875

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=97.38  E-value=0.00044  Score=60.85  Aligned_cols=38  Identities=24%  Similarity=0.233  Sum_probs=33.6

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHC-CCEEEEEeCChHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAER  116 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~-Ga~V~i~~r~~~~  116 (147)
                      .++.++||||+|.||..++++|+++ |++|++++|....
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~  352 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDA  352 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchh
Confidence            5678999999999999999999986 7999999987643

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.37  E-value=0.00075  Score=53.09  Aligned_cols=47  Identities=34%  Similarity=0.499  Sum_probs=41.2

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR  125 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~  125 (147)
                      ..+|+++|+|+ ||+|++++..|++.|++|++++|+.++.++..+++.
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~  161 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQ  161 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence            45789999997 699999999999999999999999988887766654

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=97.35  E-value=0.00049  Score=56.37  Aligned_cols=37  Identities=19%  Similarity=0.233  Sum_probs=33.5

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      -++|.++|||++|.||..+++.|.++|++|++++|..
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~   55 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKK   55 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecc
Confidence            3567899999999999999999999999999998753

>PRK09620 hypothetical protein; Provisional

Probab=97.34  E-value=0.001  Score=51.43  Aligned_cols=35  Identities=31%  Similarity=0.427  Sum_probs=31.3

Q ss_pred             CCCCEEEEeCCc----------------ChHHHHHHHHHHHCCCEEEEEeC
Q 032110           78 LPPYNVLITGST----------------KGIGYALAKEFLKAGDNVIICSR  112 (147)
Q Consensus        78 ~~~k~~lVTG~s----------------~GIG~~~a~~La~~Ga~V~i~~r  112 (147)
                      |.||.++||+|.                |.+|.++|++|+++|++|++++.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g   51 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHG   51 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeC
Confidence            468899999886                99999999999999999998764

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=97.34  E-value=0.00029  Score=55.22  Aligned_cols=35  Identities=31%  Similarity=0.423  Sum_probs=31.8

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~  116 (147)
                      .++|||++|.||..++++|.++|++|+.++|....
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~   36 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDG   36 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCcc
Confidence            38999999999999999999999999999986543

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=97.34  E-value=0.00034  Score=54.46  Aligned_cols=31  Identities=29%  Similarity=0.492  Sum_probs=29.5

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      ++||||+|.||..+++.|.++|++|++++|.
T Consensus         2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~   32 (287)
T TIGR01214         2 ILITGANGQLGRELVQQLSPEGRVVVALTSS   32 (287)
T ss_pred             EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc
Confidence            7999999999999999999999999999885

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=97.33  E-value=0.00035  Score=56.20  Aligned_cols=31  Identities=23%  Similarity=0.475  Sum_probs=26.6

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCE-EEEEeC
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDN-VIICSR  112 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~-V~i~~r  112 (147)
                      +++||||+|+||..++++|+++|++ |+..++
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~   33 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDK   33 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecC
Confidence            5899999999999999999999976 544554

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.31  E-value=0.00095  Score=50.49  Aligned_cols=47  Identities=28%  Similarity=0.438  Sum_probs=40.7

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~  123 (147)
                      .+++||++.|.|. |.+|..+++.|.+.|++|++.+++.+.+++..++
T Consensus        24 ~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          24 DSLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            4678999999996 5899999999999999999999998877666554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=97.28  E-value=0.00026  Score=56.13  Aligned_cols=58  Identities=19%  Similarity=0.222  Sum_probs=39.6

Q ss_pred             EEeCCcChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           84 LITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        84 lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +||||+|.||..++++|+++|  ++|.++++.......  ..+ ...+. ..++.+|++|..++
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~-~~~~~-~~~~~~Di~d~~~l   60 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDL-QKSGV-KEYIQGDITDPESL   60 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhh-hcccc-eeEEEeccccHHHH
Confidence            699999999999999999999  789998887643221  111 11111 22667777775543

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.27  E-value=0.00058  Score=57.03  Aligned_cols=49  Identities=33%  Similarity=0.348  Sum_probs=38.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE  126 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~  126 (147)
                      ++.+|+++|+|+++ +|.++++.|++.|++|++.+++........+++.+
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~   50 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLE   50 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHh
Confidence            46789999999875 99999999999999999999876443334444443

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.22  E-value=0.0014  Score=50.61  Aligned_cols=59  Identities=25%  Similarity=0.365  Sum_probs=42.9

Q ss_pred             EEEEeC-CcChHHHHHHHHHHHCCCEEEEEeCCh---------------HHHHHHHHHHHHHhCCeEEEEEcccC
Q 032110           82 NVLITG-STKGIGYALAKEFLKAGDNVIICSRSA---------------ERVDSAVQSLREEFGEQHVVQNVMLA  140 (147)
Q Consensus        82 ~~lVTG-~s~GIG~~~a~~La~~Ga~V~i~~r~~---------------~~~~~~~~~l~~~~~~~~~~~~~dv~  140 (147)
                      +=.||. ++||||+++|++|+++|++|+++++..               +..++.++++.+.++..++++++...
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l~~~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv   90 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRALKPEPHPNLSIREIETTKDLLITLKELVQEHDILIHSMAV   90 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhhcccccCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEe
Confidence            345554 578999999999999999999987421               22344556666777877888876653

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=97.22  E-value=0.00074  Score=59.32  Aligned_cols=36  Identities=22%  Similarity=0.425  Sum_probs=31.6

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHC--CCEEEEEeCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKA--GDNVIICSRS  113 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~--Ga~V~i~~r~  113 (147)
                      .++|+++||||+|.||..+++.|.++  |++|+++++.
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~   41 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKL   41 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence            34678999999999999999999988  6889888874

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.19  E-value=0.0022  Score=45.67  Aligned_cols=47  Identities=26%  Similarity=0.424  Sum_probs=39.7

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLR  125 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~~~~l~  125 (147)
                      +++++++|+|+ |++|..+++.|.+.| .+|++++|+.+..++..+++.
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~   64 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFG   64 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh
Confidence            56778999986 899999999999996 789999999888777666544

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.12  E-value=0.0035  Score=49.88  Aligned_cols=51  Identities=24%  Similarity=0.308  Sum_probs=43.7

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHHHh
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEF  128 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~l~~~~  128 (147)
                      ...+|.++|.| +||.|++++..|+..|+ +|++++|+.++.++.++++...+
T Consensus       124 ~~~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~  175 (284)
T PRK12549        124 DASLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARF  175 (284)
T ss_pred             CccCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhC
Confidence            45678899998 78999999999999996 79999999999988887775543

>PRK07201 short chain dehydrogenase; Provisional

Probab=97.10  E-value=0.0022  Score=55.77  Aligned_cols=58  Identities=22%  Similarity=0.287  Sum_probs=40.2

Q ss_pred             EEEEeCCcChHHHHHHHHHH--HCCCEEEEEeCChHHHHHHHHHHHHHhC-CeEEEEEcccCC
Q 032110           82 NVLITGSTKGIGYALAKEFL--KAGDNVIICSRSAERVDSAVQSLREEFG-EQHVVQNVMLAK  141 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La--~~Ga~V~i~~r~~~~~~~~~~~l~~~~~-~~~~~~~~dv~~  141 (147)
                      +++||||+|.||..+++.|+  ..|++|++++|+... .. ..++....+ ....++..|+++
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~-~~~~~~~~~~~~v~~~~~Dl~~   62 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SR-LEALAAYWGADRVVPLVGDLTE   62 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HH-HHHHHHhcCCCcEEEEecccCC
Confidence            58999999999999999999  589999999996532 11 122222221 224556677766

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=97.10  E-value=0.004  Score=52.07  Aligned_cols=47  Identities=26%  Similarity=0.371  Sum_probs=41.3

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ  122 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~  122 (147)
                      .+.+...++|+|++|++|+-+++.|.++|..|..+-|+.++.++...
T Consensus        75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~  121 (411)
T KOG1203|consen   75 NSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG  121 (411)
T ss_pred             CCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence            34566799999999999999999999999999999999988776655

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.08  E-value=0.0044  Score=49.45  Aligned_cols=43  Identities=23%  Similarity=0.366  Sum_probs=37.8

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      +.+.||+++|.|. |++|.++++.|...|++|++++|+.++.++
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            4678999999995 779999999999999999999999876543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.06  E-value=0.0034  Score=50.10  Aligned_cols=52  Identities=25%  Similarity=0.304  Sum_probs=44.7

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHHHh
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEF  128 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~~~~l~~~~  128 (147)
                      .+.+++.++|.| +||-+++++..|++.| .+|+++.|+.++++++++.+.+.+
T Consensus       122 ~~~~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~  174 (283)
T COG0169         122 VDVTGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELG  174 (283)
T ss_pred             cccCCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc
Confidence            345688999997 8999999999999999 579999999999998888777543

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=97.05  E-value=0.0014  Score=49.86  Aligned_cols=33  Identities=30%  Similarity=0.463  Sum_probs=31.1

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      ++|+|++|.+|..+++.|.+.+++|.++.|+..
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~   33 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS   33 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc
Confidence            689999999999999999999999999999873

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.01  E-value=0.0029  Score=47.47  Aligned_cols=65  Identities=22%  Similarity=0.323  Sum_probs=41.6

Q ss_pred             CCCCEEEEeCC----------------cChHHHHHHHHHHHCCCEEEEEeCCh-------------HHHHHHHHHHHHHh
Q 032110           78 LPPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSRSA-------------ERVDSAVQSLREEF  128 (147)
Q Consensus        78 ~~~k~~lVTG~----------------s~GIG~~~a~~La~~Ga~V~i~~r~~-------------~~~~~~~~~l~~~~  128 (147)
                      |+||.++||+|                +|-+|.++|+++..+|++|+++....             +..++..+.+.+..
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~p~~~~~i~v~sa~em~~~~~~~~   80 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLPPPPGVKVIRVESAEEMLEAVKELL   80 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS----TTEEEEE-SSHHHHHHHHHHHG
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccccccccceEEEecchhhhhhhhcccc
Confidence            45677777765                57799999999999999999876542             23556666666666


Q ss_pred             CCeEEEEEcccCCC
Q 032110          129 GEQHVVQNVMLAKG  142 (147)
Q Consensus       129 ~~~~~~~~~dv~~~  142 (147)
                      ++.++++.+....+
T Consensus        81 ~~~Di~I~aAAVsD   94 (185)
T PF04127_consen   81 PSADIIIMAAAVSD   94 (185)
T ss_dssp             GGGSEEEE-SB--S
T ss_pred             CcceeEEEecchhh
Confidence            66677776555443

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=97.01  E-value=0.0027  Score=50.37  Aligned_cols=32  Identities=28%  Similarity=0.534  Sum_probs=28.7

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      +++||||+|.||..+++.|.++| +|++++|..
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~   33 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHS   33 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEecccc
Confidence            59999999999999999999999 788888753

>PRK05865 hypothetical protein; Provisional

Probab=96.99  E-value=0.0014  Score=59.43  Aligned_cols=33  Identities=24%  Similarity=0.456  Sum_probs=31.1

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      +++|||++|+||..++++|+++|++|++++|+.
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~   34 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHR   34 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCc
Confidence            589999999999999999999999999999874

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.88  E-value=0.0038  Score=53.21  Aligned_cols=46  Identities=24%  Similarity=0.399  Sum_probs=40.0

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~  123 (147)
                      .+.+|.++|+|+ ||+|++++..|++.|++|++.+|+.++.++..++
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~  374 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR  374 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            467889999995 7999999999999999999999998877766554

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=96.87  E-value=0.002  Score=53.08  Aligned_cols=37  Identities=19%  Similarity=0.354  Sum_probs=33.0

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCC--CEEEEEeCChH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAE  115 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~~~  115 (147)
                      ++.+++||||+|.+|..++.+|.+.+  .+|.+.|..+.
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~   41 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPT   41 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCcc
Confidence            46689999999999999999999999  78999888764

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=96.84  E-value=0.0017  Score=51.27  Aligned_cols=31  Identities=23%  Similarity=0.358  Sum_probs=26.4

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      ++||||+|.||..++++|+++|++++++.++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~   32 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDN   32 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecC
Confidence            6999999999999999999999865554433

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.83  E-value=0.0049  Score=45.56  Aligned_cols=45  Identities=20%  Similarity=0.350  Sum_probs=38.3

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .++.+|.++|.|++.-+|..+++.|.++|++|.++.|+.+.+.+.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~~   84 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKEH   84 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHHH
Confidence            468999999999866679999999999999999999987655443

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PLN02503 fatty acyl-CoA reductase 2

Probab=96.83  E-value=0.0052  Score=53.86  Aligned_cols=38  Identities=24%  Similarity=0.355  Sum_probs=32.9

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCC---EEEEEeCCh
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD---NVIICSRSA  114 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga---~V~i~~r~~  114 (147)
                      .+++|+++||||+|.||..+++.|++.+.   +|+++.|..
T Consensus       116 f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k  156 (605)
T PLN02503        116 FLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAK  156 (605)
T ss_pred             hhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence            36899999999999999999999998663   688888854

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.81  E-value=0.0083  Score=47.83  Aligned_cols=51  Identities=16%  Similarity=0.270  Sum_probs=42.7

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHHHh
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEF  128 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~l~~~~  128 (147)
                      ..++|.++|-| +||-+++++..|++.|+ +|++++|+.++.+++++.+...+
T Consensus       124 ~~~~k~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~  175 (283)
T PRK14027        124 NAKLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAV  175 (283)
T ss_pred             CcCCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc
Confidence            35678899998 69999999999999996 79999999999888877765433

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.76  E-value=0.0065  Score=48.27  Aligned_cols=48  Identities=17%  Similarity=0.264  Sum_probs=41.0

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLR  125 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~l~  125 (147)
                      .+++|.++|-| +||.+++++..|++.|+ +|+++.|+.++.+++++++.
T Consensus       122 ~~~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~  170 (282)
T TIGR01809       122 PLAGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV  170 (282)
T ss_pred             ccCCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence            35688899987 69999999999999996 69999999998888776653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.72  E-value=0.0053  Score=51.06  Aligned_cols=57  Identities=23%  Similarity=0.367  Sum_probs=43.5

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      +.++|-|+ |++|..+|+.|++.| .+|++.+|+.++..+..+....    ..-...+|+.+.
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~----~v~~~~vD~~d~   59 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGG----KVEALQVDAADV   59 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccc----cceeEEecccCh
Confidence            46788886 999999999999999 8999999999887766544322    344556666654

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.69  E-value=0.018  Score=42.41  Aligned_cols=63  Identities=19%  Similarity=0.249  Sum_probs=41.1

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH------HHHHhCCeEEEEEccc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS------LREEFGEQHVVQNVML  139 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~------l~~~~~~~~~~~~~dv  139 (147)
                      ..+.||+++|.| -|-+|+.+|+.|...|++|++++.++-.+-++..+      +.+.....++++.+-+
T Consensus        19 ~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~~~~~a~~~adi~vtaTG   87 (162)
T PF00670_consen   19 LMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVMTLEEALRDADIFVTATG   87 (162)
T ss_dssp             S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE-HHHHTTT-SEEEE-SS
T ss_pred             eeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEecCHHHHHhhCCEEEECCC
Confidence            467899999998 88999999999999999999999998665544321      2333445556655433

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=96.66  E-value=0.0034  Score=48.49  Aligned_cols=58  Identities=21%  Similarity=0.236  Sum_probs=37.3

Q ss_pred             EeCCcChHHHHHHHHHHHCCC--EEEEEeCChHH---HHHHHHHH-----HH----HhCCeEEEEEcccCCC
Q 032110           85 ITGSTKGIGYALAKEFLKAGD--NVIICSRSAER---VDSAVQSL-----RE----EFGEQHVVQNVMLAKG  142 (147)
Q Consensus        85 VTG~s~GIG~~~a~~La~~Ga--~V~i~~r~~~~---~~~~~~~l-----~~----~~~~~~~~~~~dv~~~  142 (147)
                      |||++|.+|..+.++|++.+.  +|+++.|..+.   .++..+.+     ..    .......++..|++++
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~   72 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQP   72 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSG
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEecccccc
Confidence            799999999999999999886  89999997632   22222211     11    1245577889999874

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK12320 hypothetical protein; Provisional

Probab=96.64  E-value=0.0059  Score=54.36  Aligned_cols=34  Identities=21%  Similarity=0.449  Sum_probs=31.3

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      +++||||+|.||..++++|.++|++|++++|...
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~   35 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPH   35 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChh
Confidence            5899999999999999999999999999998653

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.59  E-value=0.0045  Score=50.84  Aligned_cols=57  Identities=21%  Similarity=0.427  Sum_probs=41.2

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           83 VLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      ++|-|+ |.+|..+++.|++++-  +|++.+|+.+++++..+++   .+.....+.+|+.|..
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~---~~~~~~~~~~d~~~~~   59 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL---LGDRVEAVQVDVNDPE   59 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT-----TTTTEEEEE--TTTHH
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc---cccceeEEEEecCCHH
Confidence            588999 9999999999999884  8999999999988877665   3334566677777643

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=96.56  E-value=0.006  Score=48.95  Aligned_cols=38  Identities=26%  Similarity=0.333  Sum_probs=33.4

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      ...++.++||||+|.||..++..|..+|+.|+++|.-.
T Consensus        24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~f   61 (350)
T KOG1429|consen   24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYF   61 (350)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEeccc
Confidence            34567999999999999999999999999999988643

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=96.52  E-value=0.016  Score=44.78  Aligned_cols=59  Identities=24%  Similarity=0.355  Sum_probs=40.6

Q ss_pred             EEEEeCCc-ChHHHHHHHHHHHCCCEEEEEeCChH---------------HHHHHHHHHHHHhCCeEEEEEcccC
Q 032110           82 NVLITGST-KGIGYALAKEFLKAGDNVIICSRSAE---------------RVDSAVQSLREEFGEQHVVQNVMLA  140 (147)
Q Consensus        82 ~~lVTG~s-~GIG~~~a~~La~~Ga~V~i~~r~~~---------------~~~~~~~~l~~~~~~~~~~~~~dv~  140 (147)
                      +-.||..+ |+||.+++++|+++|++|+++++...               ..++..+.+.+..+..++++++...
T Consensus        17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAv   91 (229)
T PRK06732         17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKPEPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAV   91 (229)
T ss_pred             ceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccCCCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCcc
Confidence            55778655 45999999999999999999876422               1222334455555666777776655

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.46  E-value=0.022  Score=47.79  Aligned_cols=47  Identities=19%  Similarity=0.347  Sum_probs=40.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSL  124 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~l  124 (147)
                      .+.+|.++|.| +||+|..++..|+..|+ +++++.|+.++.++..+++
T Consensus       178 ~l~~kkvlviG-aG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~  225 (414)
T PRK13940        178 NISSKNVLIIG-AGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF  225 (414)
T ss_pred             CccCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh
Confidence            57889999998 59999999999999995 7999999988877665554

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=96.45  E-value=0.0037  Score=49.08  Aligned_cols=31  Identities=23%  Similarity=0.440  Sum_probs=27.9

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC
Q 032110           83 VLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~  113 (147)
                      ++|||++|.||..+++.|.++|+ .|++++|.
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~   32 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNL   32 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecC
Confidence            58999999999999999999997 68888764

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.43  E-value=0.019  Score=42.70  Aligned_cols=42  Identities=29%  Similarity=0.478  Sum_probs=33.6

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR  125 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~  125 (147)
                      +.|.| +|-+|..+|..++..|++|.+++++++.+++..+.+.
T Consensus         2 V~ViG-aG~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~   43 (180)
T PF02737_consen    2 VAVIG-AGTMGRGIAALFARAGYEVTLYDRSPEALERARKRIE   43 (180)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHH
T ss_pred             EEEEc-CCHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHH
Confidence            55666 5999999999999999999999999988776555443

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PLN02996 fatty acyl-CoA reductase

Probab=96.43  E-value=0.015  Score=49.68  Aligned_cols=37  Identities=19%  Similarity=0.342  Sum_probs=32.1

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCC---CEEEEEeCCh
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAG---DNVIICSRSA  114 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~G---a~V~i~~r~~  114 (147)
                      ++||+++||||+|.||..+++.|++.+   .+|+++.|..
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~   48 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAS   48 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCC
Confidence            688999999999999999999999765   3688888865

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.41  E-value=0.029  Score=44.91  Aligned_cols=41  Identities=27%  Similarity=0.400  Sum_probs=36.1

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      .+.+++++|.|. |++|+.++..|...|++|++++|+.+..+
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~  189 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLA  189 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            467899999995 78999999999999999999999976543

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=96.30  E-value=0.0033  Score=49.21  Aligned_cols=29  Identities=14%  Similarity=0.293  Sum_probs=25.6

Q ss_pred             EEeCCcChHHHHHHHHHHHCCCEEEEEeC
Q 032110           84 LITGSTKGIGYALAKEFLKAGDNVIICSR  112 (147)
Q Consensus        84 lVTG~s~GIG~~~a~~La~~Ga~V~i~~r  112 (147)
                      +||||+|.||..+++.|++.|++|++..+
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~   29 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRT   29 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeec
Confidence            59999999999999999999988776543

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.22  E-value=0.025  Score=43.09  Aligned_cols=43  Identities=33%  Similarity=0.486  Sum_probs=37.1

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l  124 (147)
                      .+.|.||+|.+|.+++..|++.|++|++.+|++++.++...+.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~   44 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKA   44 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHH
Confidence            4788898999999999999999999999999998877665543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.14  E-value=0.041  Score=43.96  Aligned_cols=49  Identities=14%  Similarity=0.206  Sum_probs=38.8

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCCh---HHHHHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA---ERVDSAVQSLRE  126 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~---~~~~~~~~~l~~  126 (147)
                      .+++|.++|-| +||-+++++..|+..|+ +|++++|+.   ++.+++++++..
T Consensus       121 ~~~~k~vlvlG-aGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~  173 (288)
T PRK12749        121 DIKGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE  173 (288)
T ss_pred             CcCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhh
Confidence            46788999998 57779999999999995 799999995   466666555543

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=96.11  E-value=0.017  Score=42.29  Aligned_cols=47  Identities=30%  Similarity=0.406  Sum_probs=38.2

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCe
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ  131 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~  131 (147)
                      ++.+|..+-+|+++|.+|.++|.+|+++  +.+..+.+..++..+..+.
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~~~~~~~   47 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAPEECQSN   47 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcCHHhhcc
Confidence            4789999999999999999999999998  6667777776766554443

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.10  E-value=0.029  Score=44.83  Aligned_cols=57  Identities=16%  Similarity=0.274  Sum_probs=42.8

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEccc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVML  139 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv  139 (147)
                      ..+.||.++|.|.++-.|+.++..|.++|+.|.++.+....+.+       ...+.++++++-.
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L~~-------~~~~aDIvI~AtG  211 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNLPE-------LVKQADIIVGAVG  211 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhHHH-------HhccCCEEEEccC
Confidence            46899999999977779999999999999999999885433322       2244566666543

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=96.04  E-value=0.024  Score=49.85  Aligned_cols=56  Identities=29%  Similarity=0.166  Sum_probs=37.2

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEE-EEeCChHHHHHHHHHHHHHhCCeEEEEEccc
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVI-ICSRSAERVDSAVQSLREEFGEQHVVQNVML  139 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~-i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv  139 (147)
                      ++++|||++|.||..+++.|.++|++|. ..++ ....+.....+.. . +.++++|+..
T Consensus       381 mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~~~~-l~d~~~v~~~i~~-~-~pd~Vih~Aa  437 (668)
T PLN02260        381 LKFLIYGRTGWIGGLLGKLCEKQGIAYEYGKGR-LEDRSSLLADIRN-V-KPTHVFNAAG  437 (668)
T ss_pred             ceEEEECCCchHHHHHHHHHHhCCCeEEeeccc-cccHHHHHHHHHh-h-CCCEEEECCc
Confidence            4699999999999999999999999984 3332 2222222222222 1 3467777764

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.02  E-value=0.025  Score=45.19  Aligned_cols=43  Identities=19%  Similarity=0.189  Sum_probs=36.7

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      ..|..++|+|+++++|..+++.+...|++|+.+++++++.+.+
T Consensus       150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~  192 (338)
T cd08295         150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLL  192 (338)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            3578999999999999999998889999999988887665544

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.01  E-value=0.031  Score=36.59  Aligned_cols=41  Identities=34%  Similarity=0.498  Sum_probs=33.5

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCC---CEEEEE-eCChHHHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAG---DNVIIC-SRSAERVDSAVQSL  124 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~G---a~V~i~-~r~~~~~~~~~~~l  124 (147)
                      ..+|  |+|.+|.++++.|.+.|   .+|.+. .|++++.++..+++
T Consensus         2 I~iI--G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~   46 (96)
T PF03807_consen    2 IGII--GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY   46 (96)
T ss_dssp             EEEE--STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred             EEEE--CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence            3445  69999999999999999   899965 99998887765543

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.00  E-value=0.032  Score=47.65  Aligned_cols=64  Identities=22%  Similarity=0.275  Sum_probs=45.2

Q ss_pred             CCCCCEEEEeCC----------------cChHHHHHHHHHHHCCCEEEEEeCC-------------hHHHHHHHHHHHHH
Q 032110           77 MLPPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSRS-------------AERVDSAVQSLREE  127 (147)
Q Consensus        77 ~~~~k~~lVTG~----------------s~GIG~~~a~~La~~Ga~V~i~~r~-------------~~~~~~~~~~l~~~  127 (147)
                      +|.||.++||+|                +|-+|+++|+++..+|++|+++.-.             -+..++..+++.+.
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~~~p~~v~~i~V~ta~eM~~av~~~  332 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDLADPQGVKVIHVESARQMLAAVEAA  332 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCCCCCCCceEEEecCHHHHHHHHHhh
Confidence            589999999986                3669999999999999999987521             12355666666665


Q ss_pred             hCCeEEEEE-cccCC
Q 032110          128 FGEQHVVQN-VMLAK  141 (147)
Q Consensus       128 ~~~~~~~~~-~dv~~  141 (147)
                      ++. ++++. ..|.|
T Consensus       333 ~~~-Di~I~aAAVaD  346 (475)
T PRK13982        333 LPA-DIAIFAAAVAD  346 (475)
T ss_pred             CCC-CEEEEeccccc
Confidence            553 44554 44444

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.98  E-value=0.07  Score=39.37  Aligned_cols=43  Identities=30%  Similarity=0.250  Sum_probs=36.3

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      ...+.||++.|.| .|.||+++++.|...|++|+.++|.....+
T Consensus        31 ~~~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   31 GRELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             BS-STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             ccccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhh
Confidence            3467899999997 799999999999999999999999887544

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.96  E-value=0.025  Score=44.88  Aligned_cols=44  Identities=20%  Similarity=0.261  Sum_probs=37.5

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSL  124 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~l  124 (147)
                      +|.++|.| +||-+++++..|++.|+ +|++++|+.++.+++++.+
T Consensus       122 ~~~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRG-SGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            45788887 69999999999999996 5999999999888776554

>PRK06849 hypothetical protein; Provisional

Probab=95.96  E-value=0.031  Score=46.04  Aligned_cols=36  Identities=33%  Similarity=0.442  Sum_probs=32.8

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      +.|+++|||++..+|+.+++.|.+.|++|++++.+.
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~   38 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLK   38 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            457899999999999999999999999999998764

>cd08293 PTGR2 Prostaglandin reductase

Probab=95.92  E-value=0.028  Score=44.78  Aligned_cols=40  Identities=15%  Similarity=0.117  Sum_probs=34.6

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSA  120 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~  120 (147)
                      .+++|.|+++++|..+++.....|+ +|+.+++++++.+.+
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~  196 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLL  196 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence            7999999999999999988888998 799998887765543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.91  E-value=0.031  Score=40.11  Aligned_cols=44  Identities=23%  Similarity=0.312  Sum_probs=38.3

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      .+++||.++|-|.+.-.|..++..|.++|+.|.+++++...+++
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~   67 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS   67 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence            36899999999999999999999999999999999875544444

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.91  E-value=0.0085  Score=46.56  Aligned_cols=64  Identities=19%  Similarity=0.277  Sum_probs=40.4

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCE-----------------EEEEeCC---------hHHHHHHHHHHHHHhCCeE
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDN-----------------VIICSRS---------AERVDSAVQSLREEFGEQH  132 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~-----------------V~i~~r~---------~~~~~~~~~~l~~~~~~~~  132 (147)
                      .+|++++||+++|||..++..+..++-.                 |...+..         ...++...+..++.+++..
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~   84 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRD   84 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCcee
Confidence            4679999999999997777666554422                 2221110         1223445555667778888


Q ss_pred             EEEEcccCCC
Q 032110          133 VVQNVMLAKG  142 (147)
Q Consensus       133 ~~~~~dv~~~  142 (147)
                      ++++..+.-+
T Consensus        85 iiI~NAG~lg   94 (253)
T KOG1204|consen   85 IIIHNAGSLG   94 (253)
T ss_pred             EEEecCCCcc
Confidence            8888776643

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=95.88  E-value=0.032  Score=44.27  Aligned_cols=41  Identities=17%  Similarity=0.199  Sum_probs=35.5

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      .|.+++|+|+++++|..+++.+...|++|+.+++++++.+.
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~  178 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAY  178 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            57799999999999999999888999999998888766543

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.85  E-value=0.035  Score=44.47  Aligned_cols=42  Identities=19%  Similarity=0.293  Sum_probs=37.4

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      .+.||.++|.|.+.-+|+.++..|..+|++|+++.+....++
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~  196 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMA  196 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHH
Confidence            689999999999999999999999999999999988654443

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=95.82  E-value=0.054  Score=47.73  Aligned_cols=70  Identities=19%  Similarity=0.185  Sum_probs=49.1

Q ss_pred             CCCCCCEEEEeCCc-ChHHHHHHHHHHHCCCEEEEEeCChH-HHHHHHHHHHHH---hCCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGST-KGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREE---FGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s-~GIG~~~a~~La~~Ga~V~i~~r~~~-~~~~~~~~l~~~---~~~~~~~~~~dv~~~~~~  145 (147)
                      ....+|+++|||++ +.||.+++..|+..|++|+++.-+.+ +-.+..+.|-..   ++...+++..+..+-.++
T Consensus       392 ~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDV  466 (866)
T COG4982         392 GTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDV  466 (866)
T ss_pred             CCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhH
Confidence            35678999999977 67999999999999999999755433 333344444443   344567777776655444

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=95.82  E-value=0.033  Score=45.13  Aligned_cols=42  Identities=17%  Similarity=0.205  Sum_probs=36.1

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .|.+++|.|+++++|..+++.+...|++|+.+++++++.+.+
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~  199 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLL  199 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            578999999999999999998889999999888887665433

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.82  E-value=0.075  Score=44.55  Aligned_cols=45  Identities=27%  Similarity=0.499  Sum_probs=38.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQ  122 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~~~  122 (147)
                      .+.+++++|.|+ |.+|..+++.|...| .+|++++|+.++.++.++
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~  222 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAK  222 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH
Confidence            477889999985 999999999999999 789999999877655443

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=95.81  E-value=0.015  Score=48.00  Aligned_cols=64  Identities=17%  Similarity=0.283  Sum_probs=54.6

Q ss_pred             EEEEeCCcChHHHHHHHHHHH----CCCEEEEEeCChHHHHHHHHHHHHHhCC---eEEEEEcccCCCCCc
Q 032110           82 NVLITGSTKGIGYALAKEFLK----AGDNVIICSRSAERVDSAVQSLREEFGE---QHVVQNVMLAKGMKW  145 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~----~Ga~V~i~~r~~~~~~~~~~~l~~~~~~---~~~~~~~dv~~~~~~  145 (147)
                      -++|-|++|.-|.-+++++..    .|..+.+.+||++++++.++++.+..+.   ..+++.+|++|+.++
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl   77 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASL   77 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHH
Confidence            479999999999999999998    8889999999999999999998877643   245788999887654

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=95.81  E-value=0.038  Score=42.79  Aligned_cols=42  Identities=29%  Similarity=0.287  Sum_probs=36.6

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      ..++.++|+|+++++|.++++.+...|++|+++++++++.+.
T Consensus       143 ~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  184 (325)
T cd08253         143 KAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAEL  184 (325)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            357899999999999999999999999999999987765543

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=95.77  E-value=0.039  Score=42.66  Aligned_cols=41  Identities=29%  Similarity=0.379  Sum_probs=35.9

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      ..++.++|+|+++++|..+++.+...|++|++++++.+..+
T Consensus       138 ~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~  178 (323)
T cd05276         138 KAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLE  178 (323)
T ss_pred             CCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence            35779999999999999999999999999999988766544

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=95.71  E-value=0.058  Score=40.74  Aligned_cols=36  Identities=31%  Similarity=0.402  Sum_probs=31.1

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~  113 (147)
                      .+.+++++|.| .||+|..+++.|+..|. ++.++|.+
T Consensus        18 kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        18 RLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             HhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            46677888887 88999999999999995 79998876

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PLN02494 adenosylhomocysteinase

Probab=95.68  E-value=0.064  Score=45.79  Aligned_cols=40  Identities=23%  Similarity=0.261  Sum_probs=35.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~  117 (147)
                      .+.||+++|.| .|.||+.+++.+...|++|+++++++.+.
T Consensus       251 ~LaGKtVvViG-yG~IGr~vA~~aka~Ga~VIV~e~dp~r~  290 (477)
T PLN02494        251 MIAGKVAVICG-YGDVGKGCAAAMKAAGARVIVTEIDPICA  290 (477)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhh
Confidence            47899999998 66999999999999999999999887643

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.67  E-value=0.035  Score=37.51  Aligned_cols=54  Identities=30%  Similarity=0.334  Sum_probs=38.8

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++|.| .+.+|+.+++.|.+.+.+|++++++++..++.    .+.+   ..++..|.++...
T Consensus         1 vvI~G-~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~----~~~~---~~~i~gd~~~~~~   54 (116)
T PF02254_consen    1 VVIIG-YGRIGREIAEQLKEGGIDVVVIDRDPERVEEL----REEG---VEVIYGDATDPEV   54 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHH----HHTT---SEEEES-TTSHHH
T ss_pred             eEEEc-CCHHHHHHHHHHHhCCCEEEEEECCcHHHHHH----Hhcc---cccccccchhhhH
Confidence            46776 56899999999999777999999998775544    3322   3467788777543

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR00518 alaDH alanine dehydrogenase

Probab=95.66  E-value=0.096  Score=43.26  Aligned_cols=42  Identities=26%  Similarity=0.285  Sum_probs=35.2

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      +.++.++|.|+ |.+|+..++.+...|++|++++++.++++++
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l  206 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQL  206 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHH
Confidence            45567888875 8999999999999999999999998766544

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=95.66  E-value=0.053  Score=41.75  Aligned_cols=55  Identities=24%  Similarity=0.393  Sum_probs=40.5

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      .++|-| .|-+|+.+|+.|.+.|++|++++++++..++...+-   .  ...++..|.+++
T Consensus         2 ~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~---~--~~~~v~gd~t~~   56 (225)
T COG0569           2 KIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADE---L--DTHVVIGDATDE   56 (225)
T ss_pred             EEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhh---c--ceEEEEecCCCH
Confidence            456665 788999999999999999999999998876633311   1  135566666653

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=95.65  E-value=0.048  Score=42.84  Aligned_cols=41  Identities=29%  Similarity=0.393  Sum_probs=35.7

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      .+..++|+|+++++|.++++.+...|++|+++.++.+..+.
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~  202 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKI  202 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence            46789999999999999999999999999998887765443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=95.63  E-value=0.048  Score=42.96  Aligned_cols=40  Identities=23%  Similarity=0.359  Sum_probs=34.9

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      .|.+++|.|+++++|..+++.....|++|+.+++++++.+
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~  182 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVA  182 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            5779999999999999999998899999998888776544

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.62  E-value=0.072  Score=42.16  Aligned_cols=42  Identities=24%  Similarity=0.387  Sum_probs=35.0

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~  123 (147)
                      +.+.|.| .|.+|..++..|+..|++|++++++++.+++..++
T Consensus         5 ~kI~vIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (292)
T PRK07530          5 KKVGVIG-AGQMGNGIAHVCALAGYDVLLNDVSADRLEAGLAT   46 (292)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Confidence            3566666 79999999999999999999999999887765443

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.58  E-value=0.067  Score=43.73  Aligned_cols=37  Identities=30%  Similarity=0.442  Sum_probs=31.8

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCCh
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA  114 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~  114 (147)
                      .++++.++|.| .||+|..+++.|+..|. ++.++|++.
T Consensus        21 ~L~~~~VlIiG-~GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         21 KIREKHVLIVG-AGALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             hhcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            46777899998 68999999999999996 799998863

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=95.56  E-value=0.015  Score=46.93  Aligned_cols=32  Identities=22%  Similarity=0.366  Sum_probs=26.4

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCC--EEEEEeC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGD--NVIICSR  112 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r  112 (147)
                      +.++||||+|.||...++.+..+..  +|+.+|.
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~Dk   34 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDK   34 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEec
Confidence            3689999999999999999998774  4666654

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=95.52  E-value=0.081  Score=44.64  Aligned_cols=41  Identities=17%  Similarity=0.228  Sum_probs=36.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      .+.||+++|.| .|.||+.+++.+...|++|+++++++.+..
T Consensus       209 ~l~Gk~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~  249 (425)
T PRK05476        209 LIAGKVVVVAG-YGDVGKGCAQRLRGLGARVIVTEVDPICAL  249 (425)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCchhhH
Confidence            46899999999 579999999999999999999999876643

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.48  E-value=0.037  Score=44.62  Aligned_cols=43  Identities=16%  Similarity=0.242  Sum_probs=37.8

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      ++.||.+.|.|.++-+|+.++..|.++|+.|.++.+.....++
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e  198 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKA  198 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHH
Confidence            6899999999999999999999999999999999776554443

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.46  E-value=0.047  Score=46.08  Aligned_cols=40  Identities=25%  Similarity=0.403  Sum_probs=34.6

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      ++.|.||.|++|..++..|.+.|++|++++|+++..++..
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a   41 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVA   41 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHH
Confidence            5789999999999999999999999999999987654433

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=95.46  E-value=0.062  Score=42.09  Aligned_cols=41  Identities=27%  Similarity=0.395  Sum_probs=36.2

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      ..++.++|+|+++++|.++++.+...|++|+++++++++.+
T Consensus       165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~  205 (342)
T cd08266         165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLE  205 (342)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            35779999999999999999999999999999998876554

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=95.41  E-value=0.059  Score=45.18  Aligned_cols=46  Identities=24%  Similarity=0.413  Sum_probs=38.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQS  123 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~  123 (147)
                      ++.+++++|.| +|.+|..+++.|...|+ +|++++|+.+..++.+.+
T Consensus       179 ~~~~~~vlViG-aG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~  225 (423)
T PRK00045        179 DLSGKKVLVIG-AGEMGELVAKHLAEKGVRKITVANRTLERAEELAEE  225 (423)
T ss_pred             CccCCEEEEEC-chHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH
Confidence            46788999998 59999999999999996 799999998876655443

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.41  E-value=0.1  Score=41.55  Aligned_cols=41  Identities=20%  Similarity=0.327  Sum_probs=34.2

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~  123 (147)
                      ++-|.| .|-+|..+|..|+..|++|++.+++++.+++..+.
T Consensus         7 ~V~ViG-aG~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~   47 (286)
T PRK07819          7 RVGVVG-AGQMGAGIAEVCARAGVDVLVFETTEELATAGRNR   47 (286)
T ss_pred             EEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHH
Confidence            455666 68999999999999999999999999987764444

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=95.33  E-value=0.071  Score=42.72  Aligned_cols=44  Identities=20%  Similarity=0.480  Sum_probs=37.4

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLRE  126 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~~~~~~~~~~~l~~  126 (147)
                      .+.|.| +|++|..++..|+..|  .+|++++++++..+..+.++..
T Consensus         2 kI~IIG-aG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~   47 (306)
T cd05291           2 KVVIIG-AGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLED   47 (306)
T ss_pred             EEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHH
Confidence            567778 5999999999999999  5899999999888877777654

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=95.29  E-value=0.069  Score=44.89  Aligned_cols=43  Identities=19%  Similarity=0.230  Sum_probs=37.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .+.|++++|.| .|.||+.+++.+...|++|+++++++.+++.+
T Consensus       199 ~l~GktVvViG-~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A  241 (413)
T cd00401         199 MIAGKVAVVAG-YGDVGKGCAQSLRGQGARVIVTEVDPICALQA  241 (413)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECChhhHHHH
Confidence            46899999998 67899999999999999999999988765543

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.26  E-value=0.065  Score=40.58  Aligned_cols=37  Identities=24%  Similarity=0.296  Sum_probs=33.1

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      +++||.++|.|| |.+|...++.|.+.|++|++++++.
T Consensus         7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            578999999985 8999999999999999999998653

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=95.20  E-value=0.15  Score=36.27  Aligned_cols=45  Identities=20%  Similarity=0.423  Sum_probs=38.5

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLRE  126 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~~~~~~~~~~~l~~  126 (147)
                      ++.|.|++|.+|..++..|...+  .+++++|++++.++..+.++..
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~   48 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSH   48 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhh
Confidence            57899999999999999999988  4699999999887777666654

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=95.20  E-value=0.059  Score=43.69  Aligned_cols=39  Identities=26%  Similarity=0.399  Sum_probs=31.9

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      |.+++|+||+||+|....+-....|+.++++..+.++.+
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~  181 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE  181 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH
Confidence            789999999999999999999999977666655554443

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.19  E-value=0.079  Score=41.14  Aligned_cols=41  Identities=34%  Similarity=0.481  Sum_probs=35.9

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      ++++++|+|+++++|..+++.+...|++|++++++.++.+.
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~  184 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDA  184 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence            56789999999999999999999999999999888765443

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.19  E-value=0.042  Score=40.36  Aligned_cols=43  Identities=26%  Similarity=0.438  Sum_probs=34.0

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      ++.||.++|.|.+.-+|+.++..|.++|+.|.++....+.+++
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~   75 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE   75 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc
Confidence            5899999999999999999999999999999998776544443

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.17  E-value=0.028  Score=37.84  Aligned_cols=37  Identities=27%  Similarity=0.303  Sum_probs=31.4

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      +++||.++|.| +|.+|..-++.|.+.|++|.+++...
T Consensus         4 ~l~~~~vlVvG-gG~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    4 DLKGKRVLVVG-GGPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             --TT-EEEEEE-ESHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EcCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCch
Confidence            57899999998 49999999999999999999998874

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=95.17  E-value=0.024  Score=45.57  Aligned_cols=64  Identities=20%  Similarity=0.090  Sum_probs=45.2

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH---HHHHHHHhCCeEEEEEcccCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA---VQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~---~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      +|+++|||-+|--|.-+++.|++.|+.|..+.|........   +-+..-.......++.+|++|..
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~   68 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSS   68 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchH
Confidence            68999999999999999999999999999998864332211   11111112222567788888754

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=95.17  E-value=0.096  Score=41.89  Aligned_cols=39  Identities=31%  Similarity=0.346  Sum_probs=33.6

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      .+.|.| .|-+|..++..|+++|++|++++++++..+...
T Consensus         4 ~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~   42 (308)
T PRK06129          4 SVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAP   42 (308)
T ss_pred             EEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHH
Confidence            577887 788999999999999999999999987766543

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.11  E-value=0.1  Score=41.27  Aligned_cols=40  Identities=23%  Similarity=0.359  Sum_probs=34.5

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ  122 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~  122 (147)
                      .+.|.| .|-+|..+|..|++.|++|++++++++.+++..+
T Consensus         3 ~V~VIG-~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~   42 (288)
T PRK09260          3 KLVVVG-AGVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQ   42 (288)
T ss_pred             EEEEEC-ccHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHH
Confidence            567777 5899999999999999999999999988776544

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=95.10  E-value=0.087  Score=43.17  Aligned_cols=42  Identities=29%  Similarity=0.379  Sum_probs=36.5

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      -.|+.+.|+|.+ |+|...++.....|++|+.+++++++++.+
T Consensus       165 ~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a  206 (339)
T COG1064         165 KPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELA  206 (339)
T ss_pred             CCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHH
Confidence            358899999977 999999888888999999999999887544

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=95.08  E-value=0.1  Score=39.63  Aligned_cols=35  Identities=20%  Similarity=0.207  Sum_probs=33.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEe
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS  111 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~  111 (147)
                      .+.||.++|.|.+.=+|+.++..|.++|+.|.+++
T Consensus        59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~   93 (197)
T cd01079          59 RLYGKTITIINRSEVVGRPLAALLANDGARVYSVD   93 (197)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEe
Confidence            68999999999999999999999999999999985

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.05  E-value=0.1  Score=41.72  Aligned_cols=42  Identities=26%  Similarity=0.431  Sum_probs=36.4

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      .+.||.++|.|.+.-+|+.++..|.++|+.|.++......+.
T Consensus       154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~  195 (285)
T PRK14191        154 EIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLS  195 (285)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHH
Confidence            688999999999999999999999999999998765444443

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.04  E-value=0.17  Score=42.83  Aligned_cols=38  Identities=21%  Similarity=0.353  Sum_probs=32.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      .+.+|.++|.| .|++|.++|+.|.++|++|.+++++..
T Consensus        13 ~~~~~~v~viG-~G~~G~~~A~~L~~~G~~V~~~d~~~~   50 (480)
T PRK01438         13 DWQGLRVVVAG-LGVSGFAAADALLELGARVTVVDDGDD   50 (480)
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCch
Confidence            45678899998 588999999999999999999986654

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=95.03  E-value=0.11  Score=41.14  Aligned_cols=41  Identities=24%  Similarity=0.380  Sum_probs=34.2

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ  122 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~  122 (147)
                      +.+.|.| .|-+|..++..|+..|++|++++++++.+++..+
T Consensus         4 ~~I~ViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~   44 (291)
T PRK06035          4 KVIGVVG-SGVMGQGIAQVFARTGYDVTIVDVSEEILKNAME   44 (291)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHH
Confidence            3566666 6889999999999999999999999988775443

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=95.03  E-value=0.099  Score=44.56  Aligned_cols=36  Identities=19%  Similarity=0.383  Sum_probs=30.3

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCC---CEEEEEeCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAG---DNVIICSRS  113 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~G---a~V~i~~r~  113 (147)
                      +.+|+++||||+|.+|+.+.+.|++.-   -+++++-|.
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~   48 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRA   48 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEec
Confidence            689999999999999999999998754   257777664

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=95.02  E-value=0.081  Score=41.86  Aligned_cols=33  Identities=42%  Similarity=0.565  Sum_probs=30.0

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      +++|||++|-||.++.+.|.++|++|+.++|..
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~   34 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRSD   34 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTTC
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCchh
Confidence            589999999999999999999999999987654

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=95.01  E-value=0.14  Score=43.78  Aligned_cols=41  Identities=17%  Similarity=0.248  Sum_probs=35.3

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~  117 (147)
                      ..+.||+++|.|. |.||+.+++.+...|++|+++++++...
T Consensus       250 ~~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        250 VMIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            3689999999995 4699999999999999999998876544

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=94.99  E-value=0.097  Score=43.62  Aligned_cols=59  Identities=29%  Similarity=0.366  Sum_probs=44.1

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      ...+.++|.|+ |.+|..+++.|.+.|++|++++++++..++..++    +.+ ..++..|.++.
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~----~~~-~~~i~gd~~~~  287 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE----LPN-TLVLHGDGTDQ  287 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----CCC-CeEEECCCCCH
Confidence            45678999986 9999999999999999999999998776554332    222 33556666654

>PRK04148 hypothetical protein; Provisional

Probab=94.98  E-value=0.14  Score=36.52  Aligned_cols=54  Identities=17%  Similarity=0.130  Sum_probs=39.3

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAK  141 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~  141 (147)
                      +++.+++.|.+  .|..++..|++.|++|+.+|.++...+.+.+.       ...++..|+.+
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~-------~~~~v~dDlf~   69 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL-------GLNAFVDDLFN   69 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh-------CCeEEECcCCC
Confidence            44678888865  77788999999999999999999865444221       13456666664

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=94.87  E-value=0.12  Score=40.10  Aligned_cols=40  Identities=28%  Similarity=0.324  Sum_probs=35.3

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      .+++++|+|+++++|..+.+.+...|++|+++.++++..+
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~  178 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCA  178 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            5789999999999999999999999999999988776543

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=94.87  E-value=0.15  Score=48.24  Aligned_cols=36  Identities=25%  Similarity=0.389  Sum_probs=31.9

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCC----CEEEEEeCChH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAG----DNVIICSRSAE  115 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~G----a~V~i~~r~~~  115 (147)
                      .++++|||++|.||..+++.|++++    ++|++..|+..
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~ 1010 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKS 1010 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCC
Confidence            4689999999999999999999887    78999888754

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=94.86  E-value=0.052  Score=35.05  Aligned_cols=32  Identities=31%  Similarity=0.343  Sum_probs=22.0

Q ss_pred             CEEEEeCCcChHHHHHHHHHH-HCCCEEEEEeC
Q 032110           81 YNVLITGSTKGIGYALAKEFL-KAGDNVIICSR  112 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La-~~Ga~V~i~~r  112 (147)
                      |.++|+|++.|.|++....++ ..|++.+-+..
T Consensus        40 K~VLViGaStGyGLAsRIa~aFg~gA~TiGV~f   72 (78)
T PF12242_consen   40 KKVLVIGASTGYGLASRIAAAFGAGADTIGVSF   72 (78)
T ss_dssp             SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE-
T ss_pred             ceEEEEecCCcccHHHHHHHHhcCCCCEEEEee
Confidence            789999999999999665555 66677665544

>PLN00203 glutamyl-tRNA reductase

Probab=94.78  E-value=0.1  Score=45.16  Aligned_cols=46  Identities=26%  Similarity=0.428  Sum_probs=39.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQS  123 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~  123 (147)
                      ++.++.++|.|+ |++|..+++.|...|+ +|+++.|+.++.++..++
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~  309 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREE  309 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH
Confidence            377899999986 9999999999999996 799999998887766544

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=94.78  E-value=0.12  Score=41.65  Aligned_cols=45  Identities=27%  Similarity=0.425  Sum_probs=37.2

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQS  123 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~~~~  123 (147)
                      +.++.++|.|+ |.+|..+++.|...| .+|++++|+.++.++.+++
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~  221 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKE  221 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH
Confidence            67888999985 999999999999877 5799999998876655444

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.74  E-value=0.15  Score=40.30  Aligned_cols=40  Identities=28%  Similarity=0.305  Sum_probs=33.6

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ  122 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~  122 (147)
                      .+.|.| +|-+|..+|..|+..|++|++++++++.+++..+
T Consensus         5 kIaViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~   44 (287)
T PRK08293          5 NVTVAG-AGVLGSQIAFQTAFHGFDVTIYDISDEALEKAKE   44 (287)
T ss_pred             EEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHH
Confidence            456666 6899999999999999999999999887766543

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.72  E-value=0.079  Score=44.38  Aligned_cols=37  Identities=19%  Similarity=0.335  Sum_probs=32.5

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      +.+|+++|+|.+ |+|.++++.|+++|++|++.|....
T Consensus         3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~   39 (445)
T PRK04308          3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELK   39 (445)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            567899999964 9999999999999999999987654

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.69  E-value=0.18  Score=41.67  Aligned_cols=54  Identities=30%  Similarity=0.318  Sum_probs=41.5

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC-------------------hHHHHHHHHHHHHHhCCeE
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-------------------AERVDSAVQSLREEFGEQH  132 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~-------------------~~~~~~~~~~l~~~~~~~~  132 (147)
                      +.+++++|.| .||+|..+++.|+..|. ++.++|.+                   ..+.+.+.+.+.+.++...
T Consensus       133 l~~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~  206 (376)
T PRK08762        133 LLEARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQ  206 (376)
T ss_pred             HhcCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCE
Confidence            5667777775 78999999999999996 79998886                   3456666677777666543

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.66  E-value=0.092  Score=42.25  Aligned_cols=38  Identities=26%  Similarity=0.399  Sum_probs=35.1

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEe-CCh
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSA  114 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~-r~~  114 (147)
                      .+.||.++|.|.++-+|..++..|.++|+.|.++. |+.
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~  193 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR  193 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence            68999999999999999999999999999999995 654

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=94.66  E-value=0.18  Score=41.25  Aligned_cols=36  Identities=36%  Similarity=0.483  Sum_probs=31.1

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~  113 (147)
                      .+..+.++|.| .||+|..+++.|+..|. ++.++|.+
T Consensus        21 ~L~~~~VlVvG-~GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         21 KLREKHVLIIG-AGALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             HhcCCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            45667888888 59999999999999996 89999876

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=94.65  E-value=0.13  Score=41.23  Aligned_cols=41  Identities=17%  Similarity=0.293  Sum_probs=34.1

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~  119 (147)
                      ..+++++|.|+ |++|...++.+...|+ +|+++++++++++.
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~  209 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSL  209 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHH
Confidence            35788999985 9999999998888998 58889988877653

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=94.63  E-value=0.13  Score=41.46  Aligned_cols=41  Identities=17%  Similarity=0.270  Sum_probs=35.4

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      ..|.+++|.|+ +++|...++.+...|++|+++++++++++.
T Consensus       165 ~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~  205 (349)
T TIGR03201       165 KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEM  205 (349)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence            35789999998 999999999999999999999988876653

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=94.53  E-value=0.15  Score=36.85  Aligned_cols=37  Identities=24%  Similarity=0.441  Sum_probs=30.9

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      +.|-| +|..|.++|..|+.+|++|.++.|+++..++.
T Consensus         2 I~ViG-aG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i   38 (157)
T PF01210_consen    2 IAVIG-AGNWGTALAALLADNGHEVTLWGRDEEQIEEI   38 (157)
T ss_dssp             EEEES-SSHHHHHHHHHHHHCTEEEEEETSCHHHHHHH
T ss_pred             EEEEC-cCHHHHHHHHHHHHcCCEEEEEeccHHHHHHH
Confidence            45665 78899999999999999999999998655544

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.52  E-value=0.19  Score=40.79  Aligned_cols=40  Identities=15%  Similarity=0.130  Sum_probs=32.9

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ  122 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~  122 (147)
                      ++.|.| +|-||..+|..|+..|++|++.+++++..+...+
T Consensus         9 ~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~   48 (321)
T PRK07066          9 TFAAIG-SGVIGSGWVARALAHGLDVVAWDPAPGAEAALRA   48 (321)
T ss_pred             EEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence            555665 7889999999999999999999999876655433

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=94.51  E-value=0.24  Score=39.24  Aligned_cols=39  Identities=18%  Similarity=0.239  Sum_probs=32.9

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      +.+-|.| .|-+|..++..|+..|++|++.+++++.+++.
T Consensus         5 ~~V~vIG-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~   43 (295)
T PLN02545          5 KKVGVVG-AGQMGSGIAQLAAAAGMDVWLLDSDPAALSRG   43 (295)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHH
Confidence            3566666 78899999999999999999999999877643

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.50  E-value=0.12  Score=41.47  Aligned_cols=43  Identities=23%  Similarity=0.401  Sum_probs=37.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      ++.||.++|.|.+.-+|+.++..|..+|+.|.++.+....+++
T Consensus       156 ~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~  198 (285)
T PRK10792        156 DTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRH  198 (285)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHH
Confidence            6889999999999999999999999999999998876544443

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=94.49  E-value=0.19  Score=40.65  Aligned_cols=48  Identities=17%  Similarity=0.344  Sum_probs=40.3

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREE  127 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r~~~~~~~~~~~l~~~  127 (147)
                      .++++.|.|+ |.+|..++..|+..|.  +++++|++++.++..+.++...
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~   54 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHA   54 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhh
Confidence            3568999997 9999999999999995  7999999998887777776643

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=94.48  E-value=0.19  Score=40.89  Aligned_cols=39  Identities=26%  Similarity=0.289  Sum_probs=34.7

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~  116 (147)
                      .+.|+++.|.| .|.||..+|+.|...|++|++++++.+.
T Consensus       143 ~l~g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~  181 (330)
T PRK12480        143 PVKNMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNK  181 (330)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            57889888887 7889999999999999999999998754

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=94.45  E-value=0.16  Score=39.90  Aligned_cols=40  Identities=30%  Similarity=0.400  Sum_probs=34.9

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      +++++|.|+++++|..+++.....|++|+++++++++.+.
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~  186 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADY  186 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHH
Confidence            5689999999999999999999999999998888766543

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=94.44  E-value=0.28  Score=40.73  Aligned_cols=61  Identities=30%  Similarity=0.306  Sum_probs=41.6

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChH------HHHHHHH---HHHHHhCCeEEEEEcccCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAE------RVDSAVQ---SLREEFGEQHVVQNVMLAK  141 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~------~~~~~~~---~l~~~~~~~~~~~~~dv~~  141 (147)
                      +.+++||++|.+|.-+..+|+.+- ++|++.-|-.+      ++++.+.   .+.+.......++..|+..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e   71 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAE   71 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEeccccc
Confidence            468999999999988888887655 69999877543      2223222   2233455666777777763

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=94.41  E-value=0.35  Score=37.65  Aligned_cols=55  Identities=24%  Similarity=0.282  Sum_probs=40.0

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCCh-------------------HHHHHHHHHHHHHhCCeE
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA-------------------ERVDSAVQSLREEFGEQH  132 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~-------------------~~~~~~~~~l~~~~~~~~  132 (147)
                      .+..+.++|.|. ||+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+.+.++...
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~  103 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIA  103 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCE
Confidence            466778888885 9999999999999994 788876531                   244455566666665543

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.40  E-value=0.16  Score=40.66  Aligned_cols=43  Identities=14%  Similarity=0.339  Sum_probs=37.2

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      ++.||.++|.|.+.-+|+.++..|.++|+.|.++......+++
T Consensus       155 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~  197 (284)
T PRK14190        155 DISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAE  197 (284)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHH
Confidence            6899999999999999999999999999999988665544443

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=94.35  E-value=0.17  Score=36.67  Aligned_cols=39  Identities=28%  Similarity=0.481  Sum_probs=32.1

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      .+-+-| -|-+|..+++.|++.|++|.+++|+.++.++..
T Consensus         3 ~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~   41 (163)
T PF03446_consen    3 KIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALA   41 (163)
T ss_dssp             EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHH
T ss_pred             EEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhH
Confidence            455555 689999999999999999999999998877664

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.30  E-value=0.21  Score=39.78  Aligned_cols=41  Identities=22%  Similarity=0.331  Sum_probs=34.2

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~  123 (147)
                      .+.|.| .|-+|..++..|+..|++|++++++++.+++..+.
T Consensus         6 ~I~vIG-aG~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~   46 (311)
T PRK06130          6 NLAIIG-AGTMGSGIAALFARKGLQVVLIDVMEGALERARGV   46 (311)
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence            455565 68899999999999999999999999887766554

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=94.26  E-value=0.19  Score=40.35  Aligned_cols=39  Identities=23%  Similarity=0.201  Sum_probs=33.4

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      .|.+++|.|+ +++|...++.+...|++|+++++++++.+
T Consensus       165 ~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~  203 (329)
T TIGR02822       165 PGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARR  203 (329)
T ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHH
Confidence            5779999996 89999988888889999999999887754

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=94.25  E-value=0.19  Score=39.58  Aligned_cols=40  Identities=18%  Similarity=0.268  Sum_probs=35.1

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      .+.+++|.|+++++|..+++.+...|++|++++++.++.+
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~  184 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCR  184 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            5678999999999999999999999999999888776544

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC

Probab=94.23  E-value=0.21  Score=43.03  Aligned_cols=40  Identities=25%  Similarity=0.410  Sum_probs=34.0

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ  122 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~  122 (147)
                      .+-|.| .|-+|..+|..|+..|+.|++++++++.+++..+
T Consensus         7 kV~VIG-aG~MG~gIA~~la~aG~~V~l~d~~~e~l~~~~~   46 (503)
T TIGR02279         7 TVAVIG-AGAMGAGIAQVAASAGHQVLLYDIRAEALARAIA   46 (503)
T ss_pred             EEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence            466666 5899999999999999999999999998876543

This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=94.22  E-value=0.14  Score=39.18  Aligned_cols=33  Identities=39%  Similarity=0.436  Sum_probs=27.6

Q ss_pred             EEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110           84 LITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (147)
Q Consensus        84 lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~  116 (147)
                      +..+|+|-||.+++++|+..|++|++..|+.++
T Consensus         4 ~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~   36 (211)
T COG2085           4 IAIIGTGNIGSALALRLAKAGHEVIIGSSRGPK   36 (211)
T ss_pred             EEEeccChHHHHHHHHHHhCCCeEEEecCCChh
Confidence            445679999999999999999999998665543

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=94.19  E-value=0.12  Score=37.60  Aligned_cols=35  Identities=29%  Similarity=0.288  Sum_probs=31.4

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR  112 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r  112 (147)
                      +++||.++|.| +|-+|...++.|.+.|++|.+++.
T Consensus        10 ~l~~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIsp   44 (157)
T PRK06719         10 NLHNKVVVIIG-GGKIAYRKASGLKDTGAFVTVVSP   44 (157)
T ss_pred             EcCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcC
Confidence            68999999998 788999999999999999998853

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=94.15  E-value=0.19  Score=37.95  Aligned_cols=41  Identities=32%  Similarity=0.446  Sum_probs=34.8

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      ..+.+++|+|+++ +|.++++.+...|.+|++++++++..+.
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~  173 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLEL  173 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence            3577899999888 9999999999999999999988765443

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=94.14  E-value=0.21  Score=38.81  Aligned_cols=42  Identities=26%  Similarity=0.340  Sum_probs=36.7

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .+..++|.|+++++|..+++.+...|++|+.+++++++.+.+
T Consensus       132 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  173 (305)
T cd08270         132 LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGL  173 (305)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            478999999999999999999999999999999887665443

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=94.11  E-value=0.21  Score=32.31  Aligned_cols=35  Identities=29%  Similarity=0.577  Sum_probs=31.1

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHC-CCEEEEEeC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSR  112 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~-Ga~V~i~~r  112 (147)
                      ++.+|+++|.|. |++|..++..|.+. +.+|.+++|
T Consensus        20 ~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          20 SLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            467889999997 99999999999998 578999888

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PLN02928 oxidoreductase family protein

Probab=94.10  E-value=0.16  Score=41.56  Aligned_cols=38  Identities=32%  Similarity=0.314  Sum_probs=34.3

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      ..+.||++.|.| .|.||+++++.|...|++|+.++|..
T Consensus       155 ~~l~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~  192 (347)
T PLN02928        155 DTLFGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSW  192 (347)
T ss_pred             cCCCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCC
Confidence            358899999998 69999999999999999999999863

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=94.10  E-value=0.37  Score=39.59  Aligned_cols=38  Identities=26%  Similarity=0.309  Sum_probs=29.3

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      -+|+.++|.||++|.|.+.++-....|+..+++.++.+
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e  193 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKE  193 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccc
Confidence            46779999999999999999988889944444444433

>TIGR00936 ahcY adenosylhomocysteinase

Probab=94.08  E-value=0.2  Score=42.10  Aligned_cols=40  Identities=20%  Similarity=0.258  Sum_probs=35.7

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~  117 (147)
                      .+.||+++|.| .|.||+.+++.+...|++|+++++++.+.
T Consensus       192 ~l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~  231 (406)
T TIGR00936       192 LIAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPIRA  231 (406)
T ss_pred             CCCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChhhH
Confidence            47899999998 78899999999999999999999887654

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK13243 glyoxylate reductase; Reviewed

Probab=94.07  E-value=0.22  Score=40.52  Aligned_cols=39  Identities=23%  Similarity=0.192  Sum_probs=34.9

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      ..+.||++.|.| .|.||..+|+.|...|++|++++|...
T Consensus       146 ~~L~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~  184 (333)
T PRK13243        146 YDVYGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRK  184 (333)
T ss_pred             cCCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            358899999998 699999999999999999999998754

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=94.07  E-value=0.093  Score=42.62  Aligned_cols=33  Identities=24%  Similarity=0.312  Sum_probs=28.9

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCC-------CEEEEEeCCh
Q 032110           82 NVLITGSTKGIGYALAKEFLKAG-------DNVIICSRSA  114 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~G-------a~V~i~~r~~  114 (147)
                      .+.|||++|.+|..++..|+..+       .+|+++|+++
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~   43 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPP   43 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCC
Confidence            58999999999999999999855       4899999854

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.06  E-value=0.15  Score=40.88  Aligned_cols=42  Identities=24%  Similarity=0.418  Sum_probs=36.0

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      ++.||.++|.|.+.-+|+.++..|.++|+.|.++......+.
T Consensus       155 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~  196 (285)
T PRK14189        155 PLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLA  196 (285)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHH
Confidence            689999999999999999999999999999998765543343

>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated

Probab=94.01  E-value=0.25  Score=42.58  Aligned_cols=41  Identities=22%  Similarity=0.357  Sum_probs=34.4

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~  123 (147)
                      .+-|.| .|-+|..+|..|+..|+.|++.+++++.+++..+.
T Consensus         9 ~V~VIG-aG~MG~gIA~~la~aG~~V~l~D~~~e~l~~~~~~   49 (507)
T PRK08268          9 TVAVIG-AGAMGAGIAQVAAQAGHTVLLYDARAGAAAAARDG   49 (507)
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            466666 58899999999999999999999999988775433

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=94.01  E-value=0.38  Score=37.41  Aligned_cols=55  Identities=27%  Similarity=0.346  Sum_probs=39.9

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCCh-------------------HHHHHHHHHHHHHhCCeE
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQH  132 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~-------------------~~~~~~~~~l~~~~~~~~  132 (147)
                      .+++++++|.| .||+|..+++.|+..| -+++++|.+.                   .+.+.+.+.+.+.++...
T Consensus        21 ~L~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~   95 (240)
T TIGR02355        21 ALKASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIA   95 (240)
T ss_pred             HHhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcE
Confidence            35666788887 8899999999999999 5688877642                   234555666666666554

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=93.99  E-value=0.18  Score=41.60  Aligned_cols=35  Identities=26%  Similarity=0.295  Sum_probs=31.9

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      .+.+.|.||.|.||..++..|.+.|+.|.+++++.
T Consensus        98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~  132 (374)
T PRK11199         98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD  132 (374)
T ss_pred             cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence            35789999999999999999999999999999864

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=93.97  E-value=0.22  Score=38.34  Aligned_cols=36  Identities=25%  Similarity=0.524  Sum_probs=32.2

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCC---EEEEEeCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD---NVIICSRS  113 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga---~V~i~~r~  113 (147)
                      .+++++++|-| +||.|.++++.|.+.|.   +|++++|+
T Consensus        22 ~l~~~rvlvlG-AGgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          22 KIEEVKIVING-AGAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CccCCEEEEEC-chHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            47788999998 59999999999999996   59999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>COG5322 Predicted dehydrogenase [General function prediction only]

Probab=93.95  E-value=0.14  Score=40.98  Aligned_cols=47  Identities=23%  Similarity=0.151  Sum_probs=40.1

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~  123 (147)
                      +++..++-|.|++|.||.++++-|+.++....++.|+.+..++...+
T Consensus       164 dlsqatvaivGa~G~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~  210 (351)
T COG5322         164 DLSQATVAIVGATGDIASAIARWLAPKVGVKELLLRDAEARNRQRLT  210 (351)
T ss_pred             CHHHCeEEEecCCchHHHHHHHHhccccCEEEEecccHHhhhhhhhh
Confidence            46777899999999999999999999999999999988776654433

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.91  E-value=0.18  Score=40.49  Aligned_cols=43  Identities=19%  Similarity=0.334  Sum_probs=37.0

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      ..+.||.++|.|.+.-+|+.++..|..+|+.|.++......++
T Consensus       160 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~  202 (287)
T PRK14176        160 VDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLK  202 (287)
T ss_pred             CCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHH
Confidence            3689999999999999999999999999999999875544443

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=93.90  E-value=0.24  Score=38.28  Aligned_cols=41  Identities=29%  Similarity=0.436  Sum_probs=35.4

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      ..+..++|.|+++++|..++..+...|++|++++++.+..+
T Consensus       138 ~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~  178 (323)
T cd08241         138 QPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLA  178 (323)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHH
Confidence            35779999999999999999999999999999888765543

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PRK08223 hypothetical protein; Validated

Probab=93.90  E-value=0.39  Score=38.51  Aligned_cols=56  Identities=18%  Similarity=0.230  Sum_probs=40.4

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCCh-------------------HHHHHHHHHHHHHhCCeEE
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHV  133 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~-------------------~~~~~~~~~l~~~~~~~~~  133 (147)
                      .+.+..++|.| .||+|..+++.|+..| -++.++|.+.                   .+.+.+.+.+.+.++...+
T Consensus        24 kL~~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V   99 (287)
T PRK08223         24 RLRNSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEI   99 (287)
T ss_pred             HHhcCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEE
Confidence            35666788887 8899999999999999 5688887641                   2445556666666665543

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=93.87  E-value=0.26  Score=38.52  Aligned_cols=40  Identities=25%  Similarity=0.342  Sum_probs=35.3

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      .+..++|+|+++++|..+++.+...|++|+.++++.+..+
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~  181 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTA  181 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            4678999999999999999999999999999988776544

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=93.84  E-value=0.21  Score=42.36  Aligned_cols=41  Identities=20%  Similarity=0.265  Sum_probs=34.4

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~  117 (147)
                      ..+.+|.++|-| .||.|.++++.|.+.|+.|.+.|++....
T Consensus        11 ~~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~   51 (473)
T PRK00141         11 PQELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETAR   51 (473)
T ss_pred             ccccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHHH
Confidence            345677888888 88999999999999999999999876543

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.82  E-value=0.18  Score=40.32  Aligned_cols=43  Identities=21%  Similarity=0.295  Sum_probs=36.2

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      .++.||.++|.|.+.-+|+.++..|.++|+.|.++......++
T Consensus       153 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~  195 (281)
T PRK14183        153 IDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLK  195 (281)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHH
Confidence            3689999999999999999999999999999998754433333

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=93.81  E-value=0.25  Score=34.83  Aligned_cols=35  Identities=37%  Similarity=0.631  Sum_probs=29.6

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      ++|-| .|+||.-++..|.+.|++|.+++|.. ..+.
T Consensus         1 I~I~G-~GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~   35 (151)
T PF02558_consen    1 ILIIG-AGAIGSLYAARLAQAGHDVTLVSRSP-RLEA   35 (151)
T ss_dssp             EEEES-TSHHHHHHHHHHHHTTCEEEEEESHH-HHHH
T ss_pred             CEEEC-cCHHHHHHHHHHHHCCCceEEEEccc-cHHh
Confidence            35555 78899999999999999999999988 5554

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=93.79  E-value=0.21  Score=39.82  Aligned_cols=41  Identities=24%  Similarity=0.238  Sum_probs=34.2

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCE-EEEEeCChHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDS  119 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~-V~i~~r~~~~~~~  119 (147)
                      ..|.+++|+|+ |++|..+++.+...|++ |+++++++++.+.
T Consensus       162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~  203 (339)
T cd08239         162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLEL  203 (339)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            34788999975 89999999999999998 9999888776543

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=93.78  E-value=0.14  Score=44.29  Aligned_cols=54  Identities=24%  Similarity=0.286  Sum_probs=40.2

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      .++|.| .|.+|+.+++.|.++|.+|+++|.|+++.++..+    . +  ..++..|.+|++
T Consensus       419 hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~----~-g--~~~i~GD~~~~~  472 (558)
T PRK10669        419 HALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE----R-G--IRAVLGNAANEE  472 (558)
T ss_pred             CEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----C-C--CeEEEcCCCCHH
Confidence            466666 7889999999999999999999999887654422    1 2  345666766643

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=93.72  E-value=0.26  Score=38.82  Aligned_cols=41  Identities=27%  Similarity=0.234  Sum_probs=35.2

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      .++..++|.|+++++|.++++.....|++|+++.+++++.+
T Consensus       138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~  178 (329)
T cd08250         138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAE  178 (329)
T ss_pred             CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHH
Confidence            35778999999999999999999999999999888776544

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=93.71  E-value=0.28  Score=38.36  Aligned_cols=39  Identities=31%  Similarity=0.409  Sum_probs=34.0

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      +..++|.|+++++|..+++.....|++|+++++++++.+
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~  185 (325)
T cd05280         147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQAD  185 (325)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            458999999999999999988899999999988876544

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.71  E-value=0.16  Score=40.66  Aligned_cols=36  Identities=17%  Similarity=0.287  Sum_probs=33.4

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR  112 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r  112 (147)
                      .+.||.++|.|.++-+|+.++..|.++|+.|.++..
T Consensus       155 ~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s  190 (284)
T PRK14179        155 ELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHS  190 (284)
T ss_pred             CCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECC
Confidence            589999999999999999999999999999999843

>cd08230 glucose_DH Glucose dehydrogenase

Probab=93.68  E-value=0.27  Score=39.61  Aligned_cols=34  Identities=26%  Similarity=0.311  Sum_probs=30.0

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      .|+.++|.|+ |++|...++.+...|++|++++++
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~  205 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR  205 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence            5778999985 999999999888999999999983

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.67  E-value=0.19  Score=40.23  Aligned_cols=43  Identities=14%  Similarity=0.274  Sum_probs=37.3

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      .++.||.++|.|.+.-+|+.++..|.++|+.|.++......++
T Consensus       155 i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~  197 (284)
T PRK14177        155 IDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLP  197 (284)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence            3689999999999999999999999999999999875544444

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=93.67  E-value=0.27  Score=38.56  Aligned_cols=40  Identities=23%  Similarity=0.174  Sum_probs=34.7

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      .|..++|.|+++++|.++++.....|++|+++..+.++.+
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~  178 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVA  178 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHH
Confidence            5778999999999999999999999999988877766543

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=93.65  E-value=0.57  Score=35.70  Aligned_cols=35  Identities=26%  Similarity=0.390  Sum_probs=30.0

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~  113 (147)
                      +..+.++|.| .||+|..+++.|+..|. ++.+.|.+
T Consensus        26 L~~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         26 LKKAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HhCCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            5667788887 79999999999999995 59888876

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=93.64  E-value=0.18  Score=40.69  Aligned_cols=39  Identities=21%  Similarity=0.174  Sum_probs=34.3

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      ..+.||++.|.| .|.||+++++.|...|++|+.+++..+
T Consensus       132 ~~l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~  170 (312)
T PRK15469        132 YHREDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRK  170 (312)
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            457899999997 899999999999999999999987653

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=93.63  E-value=0.52  Score=37.43  Aligned_cols=36  Identities=14%  Similarity=0.373  Sum_probs=30.1

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS  113 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~  113 (147)
                      .+.+..++|.| .||+|..+++.|++.| .++.++|.+
T Consensus        27 kL~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         27 LFADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             HhcCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            35666788886 8899999999999999 688888754

>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1

Probab=93.62  E-value=0.34  Score=37.36  Aligned_cols=36  Identities=25%  Similarity=0.301  Sum_probs=31.3

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEE-EEeC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVI-ICSR  112 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~-i~~r  112 (147)
                      .++.++++.|.| .|.+|+.+++.|.+.|++|+ +.|.
T Consensus        27 ~~l~~~~v~I~G-~G~VG~~~a~~L~~~g~~vv~v~D~   63 (227)
T cd01076          27 IGLAGARVAIQG-FGNVGSHAARFLHEAGAKVVAVSDS   63 (227)
T ss_pred             CCccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECC
Confidence            357788999987 79999999999999999988 6666

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.62  E-value=0.2  Score=40.15  Aligned_cols=42  Identities=19%  Similarity=0.324  Sum_probs=36.4

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      ++.||.++|.|.+.-+|+.++..|..+|+.|.++......++
T Consensus       152 ~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~  193 (287)
T PRK14173        152 PLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLP  193 (287)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence            689999999999999999999999999999998765544443

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=93.60  E-value=0.26  Score=38.46  Aligned_cols=39  Identities=26%  Similarity=0.357  Sum_probs=32.2

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCE-EEEEeCChHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVD  118 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~-V~i~~r~~~~~~  118 (147)
                      .+++++|.|+ +++|...++.+...|++ |+++++++++++
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~  159 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRE  159 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            6778999975 89999999998899986 888887776654

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.58  E-value=0.21  Score=39.91  Aligned_cols=43  Identities=19%  Similarity=0.383  Sum_probs=37.2

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      .+.||.++|.|.+.-+|+.++..|.++|+.|.++......+.+
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~  197 (278)
T PRK14172        155 DIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKE  197 (278)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence            6899999999999999999999999999999998755444443

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=93.57  E-value=0.52  Score=38.72  Aligned_cols=57  Identities=19%  Similarity=0.236  Sum_probs=42.9

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCCh-------------------HHHHHHHHHHHHHhCCeEEE
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVV  134 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~-------------------~~~~~~~~~l~~~~~~~~~~  134 (147)
                      .+.+++++|.| .||+|..+++.|+..| .++.++|.+.                   .+.+.+.+.+.+.++...+.
T Consensus        25 ~L~~~~VlivG-~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~  101 (355)
T PRK05597         25 SLFDAKVAVIG-AGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVT  101 (355)
T ss_pred             HHhCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEE
Confidence            46677888887 6999999999999999 4788887642                   34566677777776665433

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=93.49  E-value=0.18  Score=39.35  Aligned_cols=44  Identities=16%  Similarity=0.332  Sum_probs=36.8

Q ss_pred             EEEeCCcChHHHHHHHHHHHCC----CEEEEEeCChHHHHHHHHHHHH
Q 032110           83 VLITGSTKGIGYALAKEFLKAG----DNVIICSRSAERVDSAVQSLRE  126 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~G----a~V~i~~r~~~~~~~~~~~l~~  126 (147)
                      +.|.|++|.+|..++..|+..|    .+|+++|+++++++....++..
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~   48 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQD   48 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHH
Confidence            3688988899999999999998    7899999998887776666544

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=93.45  E-value=0.41  Score=30.26  Aligned_cols=32  Identities=31%  Similarity=0.469  Sum_probs=27.4

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      ++|-| +|-+|.++|..|++.|.+|.++.+++.
T Consensus         2 vvViG-gG~ig~E~A~~l~~~g~~vtli~~~~~   33 (80)
T PF00070_consen    2 VVVIG-GGFIGIELAEALAELGKEVTLIERSDR   33 (80)
T ss_dssp             EEEES-SSHHHHHHHHHHHHTTSEEEEEESSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHhCcEEEEEeccch
Confidence            45555 899999999999999999999988654

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=93.44  E-value=0.25  Score=41.20  Aligned_cols=38  Identities=24%  Similarity=0.531  Sum_probs=33.0

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .++|.|+ |.+|..+++.|.++|+.|++++++++..++.
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~   39 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRL   39 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHH
Confidence            4777885 9999999999999999999999998876544

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=93.42  E-value=0.34  Score=37.58  Aligned_cols=41  Identities=34%  Similarity=0.415  Sum_probs=35.4

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      ..+..++|.|+++++|.++++.....|++|+.+.+++++.+
T Consensus       141 ~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~  181 (320)
T cd08243         141 QPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAA  181 (320)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            35779999999999999999999999999998888776543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=93.38  E-value=0.16  Score=38.37  Aligned_cols=35  Identities=29%  Similarity=0.422  Sum_probs=30.5

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~  113 (147)
                      +..+.++|.| .||+|..+++.|+..|. ++++.|.+
T Consensus        19 L~~~~V~IvG-~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        19 LEQATVAICG-LGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            5667788887 68999999999999997 69998876

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=93.36  E-value=0.33  Score=39.68  Aligned_cols=41  Identities=32%  Similarity=0.403  Sum_probs=35.3

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      .+..++|.|+++++|.++++.+...|++++++++++++.+.
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~  233 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEY  233 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence            46799999999999999999999999998888887766543

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=93.33  E-value=0.32  Score=36.89  Aligned_cols=38  Identities=26%  Similarity=0.351  Sum_probs=33.1

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      +++||.++|.| +|.+|..-++.|++.|++|++++.+..
T Consensus         6 ~l~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~   43 (205)
T TIGR01470         6 NLEGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELE   43 (205)
T ss_pred             EcCCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            47899999998 788999999999999999999987543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.31  E-value=0.24  Score=39.70  Aligned_cols=42  Identities=14%  Similarity=0.271  Sum_probs=36.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      ++.||.++|.|.+.-+|+.++..|.++|+.|.++......++
T Consensus       154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~  195 (284)
T PRK14170        154 QIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLP  195 (284)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence            689999999999999999999999999999998765444443

>PRK06487 glycerate dehydrogenase; Provisional

Probab=93.30  E-value=0.16  Score=41.10  Aligned_cols=37  Identities=22%  Similarity=0.132  Sum_probs=33.5

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      ..+.||++.|.| .|.||+++++.+...|.+|+..++.
T Consensus       144 ~~l~gktvgIiG-~G~IG~~vA~~l~~fgm~V~~~~~~  180 (317)
T PRK06487        144 VELEGKTLGLLG-HGELGGAVARLAEAFGMRVLIGQLP  180 (317)
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCC
Confidence            358899999998 7999999999999999999998875

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.29  E-value=0.24  Score=39.90  Aligned_cols=43  Identities=21%  Similarity=0.271  Sum_probs=36.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      .+.||.++|.|.+.-+|+.++..|.++|+.|.++......+++
T Consensus       155 ~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~  197 (297)
T PRK14186        155 DIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLAS  197 (297)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence            6899999999999999999999999999999888654444443

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.27  E-value=0.25  Score=39.49  Aligned_cols=42  Identities=19%  Similarity=0.272  Sum_probs=36.0

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      .+.||.++|.|.+.-+|+.++..|..+|+.|.++......++
T Consensus       153 ~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~  194 (282)
T PRK14169        153 DVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLK  194 (282)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHH
Confidence            589999999999999999999999999999988854443343

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=93.26  E-value=0.37  Score=37.03  Aligned_cols=41  Identities=27%  Similarity=0.352  Sum_probs=35.5

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      .++..++|.|+++++|..+++.+...|++|+++++++++.+
T Consensus       135 ~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~  175 (320)
T cd05286         135 KPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAE  175 (320)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence            35789999999999999999999999999999888776544

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.25  E-value=0.46  Score=37.39  Aligned_cols=37  Identities=24%  Similarity=0.371  Sum_probs=31.8

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      .+.|.| .|-+|..++..|+..|++|++++++++.+++
T Consensus         5 kI~VIG-~G~mG~~ia~~la~~g~~V~~~d~~~~~~~~   41 (282)
T PRK05808          5 KIGVIG-AGTMGNGIAQVCAVAGYDVVMVDISDAAVDR   41 (282)
T ss_pred             EEEEEc-cCHHHHHHHHHHHHCCCceEEEeCCHHHHHH
Confidence            455665 6999999999999999999999999987754

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.25  E-value=0.25  Score=39.48  Aligned_cols=42  Identities=17%  Similarity=0.311  Sum_probs=36.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      .+.||.++|.|.+.-+|+.++..|.++|+.|.++......+.
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~  196 (282)
T PRK14180        155 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLK  196 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHH
Confidence            688999999999999999999999999999999866544343

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=93.23  E-value=0.36  Score=37.82  Aligned_cols=40  Identities=38%  Similarity=0.449  Sum_probs=34.6

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      .+..++|.|+++++|..+++.+...|++++++.+++++.+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~  179 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVD  179 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            5678999999999999999999999999888887766544

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=93.22  E-value=0.64  Score=35.60  Aligned_cols=54  Identities=22%  Similarity=0.313  Sum_probs=39.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC-------------------hHHHHHHHHHHHHHhCCe
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-------------------AERVDSAVQSLREEFGEQ  131 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~-------------------~~~~~~~~~~l~~~~~~~  131 (147)
                      .+.+++++|.| .||+|.++++.|+..|. ++.++|.+                   ..+.+.+.+.+.+.++..
T Consensus        18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~   91 (228)
T cd00757          18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDV   91 (228)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCC
Confidence            35667888887 89999999999999995 68777643                   234555666676666654

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=93.15  E-value=0.4  Score=36.70  Aligned_cols=37  Identities=30%  Similarity=0.373  Sum_probs=32.8

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      +++||.++|.| +|..|..=++.|++.|++|++++...
T Consensus         9 ~l~~k~VlvvG-gG~va~rKa~~ll~~ga~v~Vvs~~~   45 (210)
T COG1648           9 DLEGKKVLVVG-GGSVALRKARLLLKAGADVTVVSPEF   45 (210)
T ss_pred             EcCCCEEEEEC-CCHHHHHHHHHHHhcCCEEEEEcCCc
Confidence            57899999998 77889999999999999999987655

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=93.13  E-value=0.36  Score=39.26  Aligned_cols=40  Identities=18%  Similarity=0.220  Sum_probs=33.2

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~  119 (147)
                      .|.+++|.| ++++|...++.+...|+ +|+++++++++++.
T Consensus       185 ~g~~VlV~G-~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~  225 (368)
T TIGR02818       185 EGDTVAVFG-LGGIGLSVIQGARMAKASRIIAIDINPAKFEL  225 (368)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence            577899997 59999999998888998 79988888776543

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=93.13  E-value=0.72  Score=32.18  Aligned_cols=52  Identities=23%  Similarity=0.415  Sum_probs=37.8

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC-------------------hHHHHHHHHHHHHHhCCeE
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-------------------AERVDSAVQSLREEFGEQH  132 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~-------------------~~~~~~~~~~l~~~~~~~~  132 (147)
                      .++++|.| .||+|..+++.|+..|. ++.++|.+                   ..+.+.+.+.+.+.++...
T Consensus         2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~   73 (135)
T PF00899_consen    2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVE   73 (135)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSE
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCcee
Confidence            34677776 89999999999999996 68888753                   1245556666777666554

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=93.12  E-value=0.36  Score=39.62  Aligned_cols=41  Identities=29%  Similarity=0.383  Sum_probs=34.6

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      ..+..++|.|+++++|..+++.+...|++++++.++.++.+
T Consensus       188 ~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~  228 (398)
T TIGR01751       188 KPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAE  228 (398)
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHH
Confidence            35679999999999999999999999999888887765543

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=93.12  E-value=0.41  Score=37.84  Aligned_cols=41  Identities=24%  Similarity=0.322  Sum_probs=35.9

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      .+..++|.|+++.+|..+++.+...|++|++++++.++.+.
T Consensus       162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~  202 (334)
T PRK13771        162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKI  202 (334)
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            46789999999999999999999999999998888766544

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=93.10  E-value=0.37  Score=38.15  Aligned_cols=40  Identities=28%  Similarity=0.292  Sum_probs=32.3

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      +++++++|+++++|...++.....|++|+++++++++.+.
T Consensus       144 ~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~  183 (324)
T cd08291         144 AKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDL  183 (324)
T ss_pred             CcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            3456666999999999998888899999998888766543

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=93.09  E-value=0.37  Score=40.54  Aligned_cols=48  Identities=27%  Similarity=0.455  Sum_probs=41.7

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLR  125 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~~~~l~  125 (147)
                      ++++|.++|.| .|-+|.-+++.|+++| .+|+++.|+.++.++++.++.
T Consensus       175 ~L~~~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~  223 (414)
T COG0373         175 SLKDKKVLVIG-AGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG  223 (414)
T ss_pred             ccccCeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence            38999999998 6779999999999999 679999999999887776653

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=93.02  E-value=0.29  Score=39.82  Aligned_cols=39  Identities=26%  Similarity=0.289  Sum_probs=31.5

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      .|++++|.| .|++|..+++.+...|++|++++.+.++..
T Consensus       183 ~g~~VlV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~  221 (360)
T PLN02586        183 PGKHLGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNKED  221 (360)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcchhh
Confidence            577889966 599999999999899999888776655433

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=93.02  E-value=0.53  Score=36.48  Aligned_cols=35  Identities=20%  Similarity=0.322  Sum_probs=29.0

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~  113 (147)
                      +.++.++|.| .||+|..+++.|++.|. +++++|.+
T Consensus         9 L~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755           9 LRNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4566788886 88999999999999994 78888754

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.00  E-value=0.28  Score=39.50  Aligned_cols=43  Identities=14%  Similarity=0.197  Sum_probs=37.1

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      .+.||.++|.|.+.-+|+.++..|.++|+.|.++......+++
T Consensus       157 ~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~  199 (294)
T PRK14187        157 NLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLAD  199 (294)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHH
Confidence            6899999999999999999999999999999988765444443

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.00  E-value=0.36  Score=38.54  Aligned_cols=44  Identities=20%  Similarity=0.416  Sum_probs=38.8

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .+.||.++|.|.+.-.|+.++..|..+|+.|.++.++...+++.
T Consensus       149 ~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~  192 (279)
T PRK14178        149 SIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAE  192 (279)
T ss_pred             CCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHH
Confidence            68999999999999999999999999999999998876555443

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=92.98  E-value=0.28  Score=39.53  Aligned_cols=44  Identities=16%  Similarity=0.241  Sum_probs=37.4

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      ..+.||.++|.|.+.=+|+.++..|.++|+.|.++......+++
T Consensus       163 i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~~  206 (299)
T PLN02516        163 IPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPES  206 (299)
T ss_pred             CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence            36899999999999999999999999999999998655444443

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=92.97  E-value=0.33  Score=40.19  Aligned_cols=42  Identities=19%  Similarity=0.226  Sum_probs=34.0

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC---EEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD---NVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga---~V~i~~r~~~~~~~~  120 (147)
                      .|.+++|.|++|++|...++.+...|+   +|+++++++++++.+
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a  219 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARA  219 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHH
Confidence            467899999999999998887766553   799999988876654

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PLN02740 Alcohol dehydrogenase-like

Probab=92.97  E-value=0.35  Score=39.53  Aligned_cols=41  Identities=22%  Similarity=0.273  Sum_probs=34.0

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~  119 (147)
                      ..|.+++|.|+ |++|...++.+...|+ +|+++++++++++.
T Consensus       197 ~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~  238 (381)
T PLN02740        197 QAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEK  238 (381)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHH
Confidence            35778999984 9999999999999998 69889888776553

>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=92.96  E-value=0.39  Score=43.03  Aligned_cols=40  Identities=18%  Similarity=0.192  Sum_probs=33.6

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      +.+.|.| +|-+|..+|..++..|++|++.|++++.+++..
T Consensus       314 ~~v~ViG-aG~mG~gIA~~~a~~G~~V~l~d~~~~~l~~~~  353 (715)
T PRK11730        314 KQAAVLG-AGIMGGGIAYQSASKGVPVIMKDINQKALDLGM  353 (715)
T ss_pred             ceEEEEC-CchhHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence            3566665 789999999999999999999999998776543

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.90  E-value=0.29  Score=39.30  Aligned_cols=42  Identities=29%  Similarity=0.426  Sum_probs=36.0

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      ++.||.++|.|.+.-+|+.++..|.++|+.|.++......++
T Consensus       156 ~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~  197 (288)
T PRK14171        156 NLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLS  197 (288)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence            689999999999999999999999999999998764443343

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.87  E-value=0.31  Score=38.99  Aligned_cols=43  Identities=23%  Similarity=0.410  Sum_probs=36.9

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      .+.||.++|.|.+.-+|+.++..|.++|+.|.++......+++
T Consensus       154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~  196 (282)
T PRK14166        154 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSL  196 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence            5899999999999999999999999999999987665444443

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=92.87  E-value=0.36  Score=38.85  Aligned_cols=41  Identities=15%  Similarity=0.240  Sum_probs=32.5

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHH-CC-CEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLK-AG-DNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~-~G-a~V~i~~r~~~~~~~~  120 (147)
                      .|.+++|+|+ |++|...++.+.. .| .+|+++++++++++.+
T Consensus       163 ~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a  205 (341)
T cd08237         163 DRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLF  205 (341)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHH
Confidence            4778999995 9999998887765 44 6799999988776543

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>PRK14968 putative methyltransferase; Provisional

Probab=92.87  E-value=0.88  Score=32.90  Aligned_cols=60  Identities=22%  Similarity=0.105  Sum_probs=38.6

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCe--EEEEEcccCC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ--HVVQNVMLAK  141 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~--~~~~~~dv~~  141 (147)
                      .++.++-.|++.|.   ++..++..+.+|+.++++++..+.+.+.+....-..  ..+++.|..+
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~   84 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFE   84 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEeccccc
Confidence            56678888877665   455555568999999999887776655554332221  3455555543

>smart00829 PKS_ER Enoylreductase

Probab=92.83  E-value=0.51  Score=35.70  Aligned_cols=42  Identities=29%  Similarity=0.339  Sum_probs=35.6

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      ..+..++|.|+++++|..+++.....|++|+.++++++..+.
T Consensus       103 ~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  144 (288)
T smart00829      103 RPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDF  144 (288)
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            356789999999999999999888999999999887765543

Enoylreductase in Polyketide synthases.

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=92.80  E-value=0.26  Score=36.79  Aligned_cols=32  Identities=25%  Similarity=0.359  Sum_probs=25.3

Q ss_pred             CcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           88 STKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        88 ~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      |.|-+|+.+|..|++.|++|+.+|.+++..++
T Consensus         7 GlGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~   38 (185)
T PF03721_consen    7 GLGYVGLPLAAALAEKGHQVIGVDIDEEKVEA   38 (185)
T ss_dssp             --STTHHHHHHHHHHTTSEEEEE-S-HHHHHH
T ss_pred             CCCcchHHHHHHHHhCCCEEEEEeCChHHHHH
Confidence            58999999999999999999999999876543

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB

Probab=92.78  E-value=0.43  Score=42.78  Aligned_cols=41  Identities=12%  Similarity=0.218  Sum_probs=34.0

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~  123 (147)
                      .+.|.| +|-+|..+|..++..|+.|++.+++++.+++..+.
T Consensus       315 ~v~ViG-aG~mG~gIA~~~a~~G~~V~l~d~~~~~l~~~~~~  355 (714)
T TIGR02437       315 QAAVLG-AGIMGGGIAYQSASKGTPIVMKDINQHSLDLGLTE  355 (714)
T ss_pred             eEEEEC-CchHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            456665 78999999999999999999999999887654433

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=92.77  E-value=0.42  Score=37.74  Aligned_cols=39  Identities=26%  Similarity=0.336  Sum_probs=32.5

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHC-CCEEEEEeCChHHHH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVD  118 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~-Ga~V~i~~r~~~~~~  118 (147)
                      +..++|.|+++++|..+++..... |++|+.+.+++++.+
T Consensus       149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~  188 (336)
T TIGR02817       149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQE  188 (336)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHH
Confidence            779999999999999988777666 999999887765543

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=92.75  E-value=0.32  Score=38.36  Aligned_cols=33  Identities=18%  Similarity=0.224  Sum_probs=29.4

Q ss_pred             CcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           88 STKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        88 ~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      |.|-+|..++..|++.|++|++++|++++.++.
T Consensus         6 G~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~   38 (291)
T TIGR01505         6 GLGIMGSPMSINLAKAGYQLHVTTIGPEVADEL   38 (291)
T ss_pred             EecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHH
Confidence            479999999999999999999999998776654

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=92.74  E-value=0.47  Score=37.77  Aligned_cols=40  Identities=25%  Similarity=0.333  Sum_probs=34.5

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      .+.+++|.| ++++|..+++.+...|++|+++++++++.+.
T Consensus       163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~  202 (333)
T cd08296         163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADL  202 (333)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHH
Confidence            577899999 8999999999999999999999988766543

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=92.74  E-value=0.49  Score=40.54  Aligned_cols=38  Identities=26%  Similarity=0.204  Sum_probs=32.1

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      |+.+|  |.|-||.++|..|+..|++|++++++++..++.
T Consensus         6 kIavI--G~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~   43 (495)
T PRK07531          6 KAACI--GGGVIGGGWAARFLLAGIDVAVFDPHPEAERII   43 (495)
T ss_pred             EEEEE--CcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence            34444  589999999999999999999999998877654

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.69  E-value=0.34  Score=38.77  Aligned_cols=42  Identities=17%  Similarity=0.206  Sum_probs=36.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      .+.||.++|.|.+.-+|+.++..|.++|+.|.++......++
T Consensus       154 ~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~  195 (282)
T PRK14182        154 DPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLA  195 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence            589999999999999999999999999999998865544444

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=92.68  E-value=0.48  Score=38.43  Aligned_cols=40  Identities=20%  Similarity=0.312  Sum_probs=33.7

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~  119 (147)
                      .|.+++|.| ++++|...++.+...|+ +|+++++++++.+.
T Consensus       186 ~g~~VlV~G-~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~  226 (368)
T cd08300         186 PGSTVAVFG-LGAVGLAVIQGAKAAGASRIIGIDINPDKFEL  226 (368)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHH
Confidence            577899997 59999999999999999 69889888776553

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=92.67  E-value=0.78  Score=37.97  Aligned_cols=54  Identities=22%  Similarity=0.374  Sum_probs=40.2

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCC-------------------hHHHHHHHHHHHHHhCCe
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-------------------AERVDSAVQSLREEFGEQ  131 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~-------------------~~~~~~~~~~l~~~~~~~  131 (147)
                      .+.++.++|.| .||+|..+++.|+..| .++.++|.+                   ..+.+.+.+.+.+.++..
T Consensus        38 ~l~~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v  111 (370)
T PRK05600         38 RLHNARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDI  111 (370)
T ss_pred             HhcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCC
Confidence            35667788887 7899999999999999 479988865                   224555566666666554

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=92.61  E-value=0.45  Score=37.16  Aligned_cols=40  Identities=23%  Similarity=0.185  Sum_probs=34.6

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~  117 (147)
                      ..+.+++|.|+++++|.++++.+...|++|+++.+++++.
T Consensus       137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~  176 (323)
T cd05282         137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQV  176 (323)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHH
Confidence            3567899999999999999999999999999888776553

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=92.60  E-value=0.85  Score=34.31  Aligned_cols=54  Identities=24%  Similarity=0.415  Sum_probs=38.5

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC-------------------hHHHHHHHHHHHHHhCCeE
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-------------------AERVDSAVQSLREEFGEQH  132 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~-------------------~~~~~~~~~~l~~~~~~~~  132 (147)
                      +.+++++|.| .+|+|.++++.|+..|. ++.++|.+                   ..+.+.+.+.+.+.++...
T Consensus        19 L~~s~VlIiG-~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~   92 (197)
T cd01492          19 LRSARILLIG-LKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVK   92 (197)
T ss_pred             HHhCcEEEEc-CCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCE
Confidence            4556777776 77799999999999995 68888753                   1234455666776666553

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=92.55  E-value=0.62  Score=38.14  Aligned_cols=38  Identities=24%  Similarity=0.334  Sum_probs=33.4

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      ..+++|++-|.| -|.||.++|+.|...|.+|++.++..
T Consensus        12 ~~LkgKtVGIIG-~GsIG~amA~nL~d~G~~ViV~~r~~   49 (335)
T PRK13403         12 ELLQGKTVAVIG-YGSQGHAQAQNLRDSGVEVVVGVRPG   49 (335)
T ss_pred             hhhCcCEEEEEe-EcHHHHHHHHHHHHCcCEEEEEECcc
Confidence            457899999997 79999999999999999999987653

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=92.54  E-value=0.42  Score=39.20  Aligned_cols=37  Identities=27%  Similarity=0.254  Sum_probs=31.2

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~  116 (147)
                      .|.+++|.|+ +++|...++.....|++|++++.+.++
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~  214 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEK  214 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHH
Confidence            5778999875 899999999999999999888876544

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=92.52  E-value=0.42  Score=37.55  Aligned_cols=38  Identities=24%  Similarity=0.458  Sum_probs=31.6

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .+.|-| +|.+|..++..|++.|++|.+++|+.+..+..
T Consensus         2 ~I~IiG-~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~   39 (304)
T PRK06522          2 KIAILG-AGAIGGLFGAALAQAGHDVTLVARRGAHLDAL   39 (304)
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCeEEEEECChHHHHHH
Confidence            367777 58999999999999999999999987665543

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=92.45  E-value=0.56  Score=36.76  Aligned_cols=40  Identities=25%  Similarity=0.380  Sum_probs=34.5

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      .+.+++|.|+++++|..+++.....|++|+++..++++.+
T Consensus       146 ~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~  185 (324)
T cd08288         146 GDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEAD  185 (324)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence            4578999999999999999999999999988887776544

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional

Probab=92.38  E-value=0.56  Score=39.95  Aligned_cols=37  Identities=16%  Similarity=0.356  Sum_probs=32.6

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEE-EEeCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVI-ICSRS  113 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~-i~~r~  113 (147)
                      .+++||+++|.| .|..|...++.|.+.|++|+ +.|.+
T Consensus       233 ~~l~Gk~VaVqG-~GnVg~~aa~~L~e~GakVVavSD~~  270 (454)
T PTZ00079        233 DSLEGKTVVVSG-SGNVAQYAVEKLLQLGAKVLTMSDSD  270 (454)
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEcCC
Confidence            458999999998 69999999999999999988 66665

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=92.35  E-value=1  Score=33.21  Aligned_cols=31  Identities=26%  Similarity=0.396  Sum_probs=26.3

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCC-EEEEEeCCh
Q 032110           83 VLITGSTKGIGYALAKEFLKAGD-NVIICSRSA  114 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~  114 (147)
                      ++|.| .||+|..+++.|+..|. ++.+.|.+.
T Consensus         2 VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           2 VGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             EEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            56666 79999999999999996 599988764

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=92.24  E-value=0.52  Score=38.28  Aligned_cols=39  Identities=21%  Similarity=0.404  Sum_probs=32.5

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVD  118 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~  118 (147)
                      .+.+++|.| ++++|...++.+...|+ +|+++++++++++
T Consensus       191 ~g~~VlV~G-~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~  230 (371)
T cd08281         191 PGQSVAVVG-LGGVGLSALLGAVAAGASQVVAVDLNEDKLA  230 (371)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHH
Confidence            577899988 58999999998888998 6888888877654

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.24  E-value=0.49  Score=37.94  Aligned_cols=44  Identities=16%  Similarity=0.241  Sum_probs=37.7

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHH----CCCEEEEEeCChHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLK----AGDNVIICSRSAERVDSA  120 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~----~Ga~V~i~~r~~~~~~~~  120 (147)
                      .+.||.++|.|.+.-+|+.++..|.+    +|+.|.++......+++.
T Consensus       154 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~  201 (286)
T PRK14184        154 SPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLAEE  201 (286)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHHHH
Confidence            68999999999999999999999999    899999987665544443

>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=92.17  E-value=0.36  Score=39.91  Aligned_cols=43  Identities=12%  Similarity=0.181  Sum_probs=37.1

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      .+.||.++|.|.+.=+|+.++..|.++|+.|.++......+++
T Consensus       228 ~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~  270 (364)
T PLN02616        228 EIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEE  270 (364)
T ss_pred             CCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCHHH
Confidence            6899999999999999999999999999999998655444443

>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial

Probab=92.13  E-value=0.54  Score=42.35  Aligned_cols=43  Identities=14%  Similarity=0.242  Sum_probs=35.2

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l  124 (147)
                      +.+-|.| +|-+|..+|..++..|++|++.|++++.+++..+.+
T Consensus       336 ~~v~ViG-aG~MG~gIA~~~a~~G~~V~l~d~~~~~l~~~~~~i  378 (737)
T TIGR02441       336 KTLAVLG-AGLMGAGIAQVSVDKGLKTVLKDATPAGLDRGQQQV  378 (737)
T ss_pred             cEEEEEC-CCHhHHHHHHHHHhCCCcEEEecCCHHHHHHHHHHH
Confidence            3566666 589999999999999999999999998877654433

Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=92.07  E-value=0.55  Score=37.56  Aligned_cols=31  Identities=29%  Similarity=0.447  Sum_probs=27.7

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      ++|||++|-+|.++++.|. .+.+|+.+++..
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~   33 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE   33 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc
Confidence            8999999999999999999 668899887755

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=92.06  E-value=1.5  Score=30.78  Aligned_cols=30  Identities=23%  Similarity=0.485  Sum_probs=25.3

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC
Q 032110           83 VLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~  113 (147)
                      ++|.| .||+|.++++.|+..|. ++.++|.+
T Consensus         2 VliiG-~GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           2 VLLVG-LGGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             EEEEC-CCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            56777 59999999999999996 68888754

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK07574 formate dehydrogenase; Provisional

Probab=91.99  E-value=0.49  Score=39.43  Aligned_cols=38  Identities=21%  Similarity=0.166  Sum_probs=34.0

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      ..+.||++.|.| .|.||+.+++.|...|++|+..+|..
T Consensus       188 ~~L~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~  225 (385)
T PRK07574        188 YDLEGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHR  225 (385)
T ss_pred             eecCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCC
Confidence            458899999998 68899999999999999999999875

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=91.90  E-value=0.3  Score=37.02  Aligned_cols=37  Identities=30%  Similarity=0.445  Sum_probs=33.7

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      ++-|.|++|-.|..+.++...+|+.|+.+.|++++..
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~   38 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLA   38 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcc
Confidence            4678899999999999999999999999999998764

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=91.88  E-value=0.71  Score=36.58  Aligned_cols=36  Identities=22%  Similarity=0.224  Sum_probs=32.2

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      .++.++|.|+++++|..+++.+...|++|+++.++.
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~  181 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDR  181 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCC
Confidence            578999999999999999999999999988887665

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=91.83  E-value=0.79  Score=36.83  Aligned_cols=38  Identities=24%  Similarity=0.173  Sum_probs=31.6

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      +.|- |.|.+|..++..|++.|++|.+++|+++..+...
T Consensus         7 I~iI-G~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~   44 (328)
T PRK14618          7 VAVL-GAGAWGTALAVLAASKGVPVRLWARRPEFAAALA   44 (328)
T ss_pred             EEEE-CcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence            4555 4899999999999999999999999887665543

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=91.81  E-value=0.67  Score=37.51  Aligned_cols=39  Identities=21%  Similarity=0.243  Sum_probs=32.7

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVD  118 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~  118 (147)
                      .|.+++|.|+ +++|...++.+...|+ +|+++++++++.+
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~  226 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFE  226 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            5778999974 8999999998889998 7999988876654

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	147
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-06
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		3e-06
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		2e-05
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		4e-05
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		5e-05
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		5e-05
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		7e-05
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		8e-05
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		9e-05
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		1e-04
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		1e-04
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		1e-04
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		3e-04
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		4e-04
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		6e-04
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		6e-04
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		6e-04
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		7e-04
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		7e-04
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		7e-04
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		7e-04
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		7e-04
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		7e-04
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		8e-04
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		8e-04
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		8e-04
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		8e-04
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		9e-04
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		9e-04
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		9e-04
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		9e-04

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 34/46 (73%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
           +ITGS+ GIG A+A+ F K G ++++ +R  +R+  A +SL+E+FG
Sbjct: 11  VITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG 56

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 34/46 (73%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
           +ITGS+ GIG A+A+ F K G ++++ +R  +R+  A +SL+E+FG
Sbjct: 11  VITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG 56

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR 125
           ++TG   GIG A+ KE L+ G NV+I SR  ER+ SA   L+
Sbjct: 22  IVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQ 63

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 73  KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           +R+P L     L+T ST GIG+A+A+   + G +V++ SR  + VD AV +L+ E
Sbjct: 9   RRDP-LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGE 62

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVVQNVMLAK 141
           L+TGST+GIG A+A++   AG  VII   S ER  +  + +  ++G + H V+  +L++
Sbjct: 11  LVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSE 69

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
           +V++TG TKGIG  +A  F +AG NV +  RS   +D+ V  L ++ G   V+
Sbjct: 12  SVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADL-DQLGSGKVI 63

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 31/46 (67%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
           L+TG ++G+G+ +A+   +AG +V++ SR+ E    A Q L E++G
Sbjct: 25  LVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG 70

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Query: 78  LPPYNV-----LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF 128
           + PY++     ++TG + GIG A  +  L+AG  V  C+R  ER+ +A  +LR+ F
Sbjct: 1   MKPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRF 56

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 78  LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           L     L+TG +KGIGYA+ +E    G  V  CSR+ + +D  ++  RE+
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK 68

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE---QHVVQNVMLA 140
           L+TGST GIG A+A   +  G NV+I  R  E V+  ++ +R ++ +   Q VV ++   
Sbjct: 14  LVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTE 73
Query: 141 KG 142
           +G
Sbjct: 74  QG 75

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
           +VL+TG TKGIG  +A  F +AG NV + +RS   + S    L  E G  +V+
Sbjct: 43  SVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELG-ELGAGNVI 94

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 72  VKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           V+R   L     L+T ST GIG A+A+   + G +V++ SR  E VD  V +L+ E
Sbjct: 6   VERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE 61

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 76  PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFG 129
           P L    VLITGS++GIG A A+ F +AG  V +  R A   +D  + S+R + G
Sbjct: 3   PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGG 57

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE 115
           +VL+TG  +GIG A+A+ F  AGD V I  RS E
Sbjct: 23  SVLVTGGNRGIGLAIARAFADAGDKVAITYRSGE 56

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 16/90 (17%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE------- 126
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 3   RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 62
Query: 127 ---------EFGEQHVVQNVMLAKGMKWQI 147
                     F EQ V Q   L  G+   I
Sbjct: 63  YIAGTMEDMTFAEQFVAQAGKLMGGLDMLI 92

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 16/90 (17%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE------- 126
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 25  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 84
Query: 127 ---------EFGEQHVVQNVMLAKGMKWQI 147
                     F EQ V Q   L  G+   I
Sbjct: 85  YIAGTMEDMTFAEQFVAQAGKLMGGLDMLI 114

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 16/90 (17%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE------- 126
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 8   RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 67
Query: 127 ---------EFGEQHVVQNVMLAKGMKWQI 147
                     F EQ V Q   L  G+   I
Sbjct: 68  YIAGTMEDMTFAEQFVAQAGKLMGGLDMLI 97

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 16/90 (17%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE------- 126
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 11  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 70
Query: 127 ---------EFGEQHVVQNVMLAKGMKWQI 147
                     F EQ V Q   L  G+   I
Sbjct: 71  YIAGTMEDMTFAEQFVAQAGKLMGGLDMLI 100

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 16/90 (17%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE------- 126
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 28  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 87
Query: 127 ---------EFGEQHVVQNVMLAKGMKWQI 147
                     F EQ V Q   L  G+   I
Sbjct: 88  YIAGTMEDMTFAEQFVAQAGKLMGGLDMLI 117

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 16/90 (17%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE------- 126
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 22  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 81
Query: 127 ---------EFGEQHVVQNVMLAKGMKWQI 147
                     F EQ V Q   L  G+   I
Sbjct: 82  YIAGTMEDMTFAEQFVAQAGKLMGGLDMLI 111

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 16/90 (17%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE------- 126
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 22  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 81
Query: 127 ---------EFGEQHVVQNVMLAKGMKWQI 147
                     F EQ V Q   L  G+   I
Sbjct: 82  YIAGTMEDMTFAEQFVAQAGKLMGGLDMLI 111

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 16/90 (17%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE------- 126
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 9   RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 68
Query: 127 ---------EFGEQHVVQNVMLAKGMKWQI 147
                     F EQ V Q   L  G+   I
Sbjct: 69  YIAGTMEDMTFAEQFVAQAGKLMGGLDMLI 98

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 16/90 (17%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE------- 126
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 18  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 77
Query: 127 ---------EFGEQHVVQNVMLAKGMKWQI 147
                     F EQ V Q   L  G+   I
Sbjct: 78  YIAGTMEDMTFAEQFVAQAGKLMGGLDMLI 107

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 39.3 bits (90), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 16/90 (17%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE------- 126
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 28  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 87
Query: 127 ---------EFGEQHVVQNVMLAKGMKWQI 147
                     F EQ V Q   L  G+   I
Sbjct: 88  YIAGTMEDMTFAEQFVAQAGKLMGGLDMLI 117

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 39.3 bits (90), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 16/90 (17%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE------- 126
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 8   RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 67
Query: 127 ---------EFGEQHVVQNVMLAKGMKWQI 147
                     F EQ V Q   L  G+   I
Sbjct: 68  YIAGTMEDMTFAEQFVAQAGKLMGGLDMLI 97

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 39.3 bits (90), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           L+TG+T GIG  +A+   K G  V +C+R  E + + ++ LRE
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE 72

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 39.3 bits (90), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           L+TG+T GIG  +A+   K G  V +C+R  E + + ++ LRE
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE 72

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           L+TG+T GIG  +A+   K G  V +C+R  E + + ++ LRE
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE 72

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           L+TG+T GIG  +A+   K G  V +C+R  E + + ++ LRE
Sbjct: 10  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE 52

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           L+TG+T GIG  +A+   K G  V +C+R  E + + ++ LRE
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE 72

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           L+TG+T GIG  +A+   K G  V +C+R  E + + ++ LRE
Sbjct: 26  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE 68

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	147
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	1e-14
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	2e-14
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	2e-14
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	4e-13
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	6e-13
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	2e-12
3imf_A	257	Short chain dehydrogenase; structural genomics, in	2e-12
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	2e-12
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	5e-12
1xq1_A	266	Putative tropinone reducatse; structural genomics,	5e-12
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	7e-12
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	1e-11
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	2e-11
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	3e-11
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	5e-11
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	6e-11
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	8e-11
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	9e-11
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	1e-10
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	1e-10
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	1e-10
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	2e-10
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-10
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	2e-10
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	3e-10
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	4e-10
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	4e-10
3cxt_A	291	Dehydrogenase with different specificities; rossma	4e-10
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	5e-10
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	6e-10
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	6e-10
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	7e-10
3rih_A	293	Short chain dehydrogenase or reductase; structural	9e-10
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	1e-09
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	1e-09
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	1e-09
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	1e-09
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	1e-09
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	1e-09
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	1e-09
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	2e-09
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	2e-09
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	2e-09
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	2e-09
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	2e-09
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	2e-09
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	2e-09
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	2e-09
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	2e-09
1spx_A	278	Short-chain reductase family member (5L265); paral	2e-09
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	2e-09
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	2e-09
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	3e-09
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	6e-09
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	6e-09
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	6e-09
1xhl_A	297	Short-chain dehydrogenase/reductase family member	7e-09
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	8e-09
1xkq_A	280	Short-chain reductase family member (5D234); parra	8e-09
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	9e-09
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	1e-08
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	1e-08
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	1e-08
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	1e-08
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	1e-08
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	2e-08
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-08
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	2e-08
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	3e-08
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	3e-08
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	3e-08
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	3e-08
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	3e-08
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	3e-08
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	3e-08
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	4e-08
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	4e-08
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	4e-08
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	4e-08
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	5e-08
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	6e-08
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-08
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	8e-08
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	8e-08
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	8e-08
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	8e-08
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	8e-08
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	8e-08
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	9e-08
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	1e-07
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	1e-07
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	1e-07
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	1e-07
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	1e-07
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	1e-07
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	1e-07
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	1e-07
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	1e-07
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	1e-07
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	1e-07
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	1e-07
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	2e-07
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	2e-07
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	2e-07
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	2e-07
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	2e-07
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	2e-07
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	2e-07
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	2e-07
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	2e-07
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	3e-07
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	3e-07
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	3e-07
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	3e-07
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	3e-07
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	3e-07
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	3e-07
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	4e-07
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	4e-07
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-07
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	5e-07
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	5e-07
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	6e-07
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	9e-07
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	9e-07
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	9e-07
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	1e-06
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	1e-06
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	1e-06
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	1e-06
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	2e-06
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	2e-06
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	2e-06
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	2e-06
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	2e-06
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	2e-06
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	3e-06
4e4y_A	244	Short chain dehydrogenase family protein; structur	3e-06
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	3e-06
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	4e-06
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	4e-06
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	4e-06
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	5e-06
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	5e-06
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	5e-06
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	5e-06
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	6e-06
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	7e-06
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	7e-06
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	7e-06
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	8e-06
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	9e-06
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	9e-06
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	1e-05
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	1e-05
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	1e-05
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	1e-05
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	1e-05
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	1e-05
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	2e-05
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	2e-05
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	2e-05
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	2e-05
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	3e-05
4dqx_A	277	Probable oxidoreductase protein; structural genomi	4e-05
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	5e-05
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	6e-05
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	6e-05
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	6e-05
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	1e-04
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	1e-04
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	1e-04
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	2e-04
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	2e-04
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-04
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	3e-04
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	3e-04
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	4e-04
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	4e-04
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	5e-04
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	6e-04

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score = 67.6 bits (166), Expect = 1e-14
 Identities = 20/49 (40%), Positives = 35/49 (71%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ 131
            +ITGS+ GIG A+A+ F K G ++++ +R  +R+  A +SL+E+FG +
Sbjct: 10  AVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVR 58

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 67.2 bits (165), Expect = 2e-14
 Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 5/76 (6%)

Query: 61  DSSSSSSSSSSVKREPMLPPYN-----VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE 115
           ++ +  S   S  ++ MLPP +       ITG   G+G  +       G   +I SR  +
Sbjct: 2   NTEALQSKFFSPLQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMD 61

Query: 116 RVDSAVQSLREEFGEQ 131
            + +  + +  + G +
Sbjct: 62  VLKATAEQISSQTGNK 77

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 66.8 bits (164), Expect = 2e-14
 Identities = 18/51 (35%), Positives = 30/51 (58%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
            L+TGST GIG A+A   +  G NV+I  R  E V+  ++ +R ++ +  +
Sbjct: 13  ALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAIL 63

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 63.3 bits (155), Expect = 4e-13
 Identities = 14/52 (26%), Positives = 27/52 (51%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
           L+TG ++GIGY + +E    G +V  CSR+ + ++  +   R +  +     
Sbjct: 13  LVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASV 64

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score = 63.3 bits (155), Expect = 6e-13
 Identities = 18/52 (34%), Positives = 28/52 (53%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
           L+TG +KGIGYA+ +E    G  V  CSR+ + +D  ++  RE+        
Sbjct: 25  LVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSV 76

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 61.4 bits (150), Expect = 2e-12
 Identities = 19/53 (35%), Positives = 28/53 (52%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            L+T ST GIG A+A+   + G +V++ SR  E VD  V +L+ E        
Sbjct: 17  ALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTV 69

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 61.4 bits (150), Expect = 2e-12
 Identities = 18/53 (33%), Positives = 30/53 (56%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
           V+ITG + G+G  +A  F K G  V+I  R+ E+++ A   + +  G+   VQ
Sbjct: 9   VIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQ 61

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 61.9 bits (150), Expect = 2e-12
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ-HVVQ 135
            ++TG  KGIG+ + K+    G  V++  R   +   AV+ L+    E     Q
Sbjct: 15  AVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQ 68

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 60.7 bits (148), Expect = 5e-12
 Identities = 18/49 (36%), Positives = 28/49 (57%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ 131
             ITG   GIG+ +A+ F++ G + +I SRS  RV +A + L    G +
Sbjct: 30  AFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRR 78

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 60.6 bits (148), Expect = 5e-12
 Identities = 14/52 (26%), Positives = 28/52 (53%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
           L+TG TKGIG+A+ +EF   G  +  C+R+   ++  +   +++  +     
Sbjct: 18  LVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSV 69

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 59.9 bits (146), Expect = 7e-12
 Identities = 12/52 (23%), Positives = 27/52 (51%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
            ++T  + G+G+A A E  + G  +++ SR+ E++++A   +        V 
Sbjct: 10  AVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVD 61

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 59.3 bits (144), Expect = 1e-11
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            L+TG  KGIG A+ ++  +    +V++ +R   R  +AVQ L+ E       Q
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQ 60

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 59.2 bits (144), Expect = 2e-11
 Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 5/67 (7%)

Query: 69  SSSVKREPMLPPY-----NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS 123
           +S  K    L P        ++TG   GIG A+ KE L+ G NV+I SR  ER+ SA   
Sbjct: 2   ASWAKGRSYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADE 61

Query: 124 LREEFGE 130
           L+     
Sbjct: 62  LQANLPP 68

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 58.0 bits (141), Expect = 3e-11
 Identities = 13/47 (27%), Positives = 23/47 (48%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
           ++ITG++ G+G  LAK +   G    +  RS  ++ +    L    G
Sbjct: 4   IVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVG 50

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 57.5 bits (140), Expect = 5e-11
 Identities = 17/52 (32%), Positives = 28/52 (53%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
           L+TGS +G+G+A A+    AG  VI+    A  +  +V +L  +  + H V 
Sbjct: 13  LVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVA 64

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 57.5 bits (140), Expect = 6e-11
 Identities = 17/46 (36%), Positives = 31/46 (67%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
           L+TG ++G+G+ +A+   +AG +V++ SR+ E    A Q L E++G
Sbjct: 25  LVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG 70

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 57.2 bits (139), Expect = 8e-11
 Identities = 20/52 (38%), Positives = 31/52 (59%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
            LITG+TKGIG  +A+ F  AG  +++  R    +D+A ++L E+FG     
Sbjct: 23  ALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHT 74

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 57.2 bits (139), Expect = 9e-11
 Identities = 16/55 (29%), Positives = 27/55 (49%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNV 137
            L+TG   GIG  +A   + AG +V+I  R+ +++  AVQ L         ++  
Sbjct: 14  YLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYE 68

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 56.4 bits (137), Expect = 1e-10
 Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 4/52 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
           +++TG+  G+G AL    ++ G  V +  R  +R+           G   + 
Sbjct: 6   IIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQE----LLLGNAVIG 53

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 56.8 bits (138), Expect = 1e-10
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            L+TG ++GIG  +A+  L+AG  V IC+R AE        L   +G+   + 
Sbjct: 32  ALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRL-SAYGDCQAIP 83

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score = 56.4 bits (137), Expect = 1e-10
 Identities = 12/52 (23%), Positives = 27/52 (51%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
           +L+TG+ +GIG A A+ +   G +V++  R+   +      ++     Q ++
Sbjct: 17  ILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLI 68

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score = 56.0 bits (136), Expect = 2e-10
 Identities = 11/52 (21%), Positives = 23/52 (44%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
            +ITG+++GIG  +A      G  V++ +RS + ++     +          
Sbjct: 10  AIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEP 61

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 56.5 bits (137), Expect = 2e-10
 Identities = 17/85 (20%), Positives = 33/85 (38%), Gaps = 1/85 (1%)

Query: 52  SYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS 111
            +HS  +   + +    S   + +        L+TG   G+G  +A+     G +V+I  
Sbjct: 5   HHHSSGVDLGTENLYFQSMMAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITG 64

Query: 112 RSAERVDSAVQSLREEFGEQ-HVVQ 135
           R  + +D+A   +    G     V 
Sbjct: 65  RRPDVLDAAAGEIGGRTGNIVRAVV 89

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score = 56.0 bits (136), Expect = 2e-10
 Identities = 18/47 (38%), Positives = 28/47 (59%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
            ++TG + GIG A  +  L+AG  V  C+R  ER+ +A  +LR+ F 
Sbjct: 11  AVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFP 57

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 55.3 bits (134), Expect = 3e-10
 Identities = 21/71 (29%), Positives = 30/71 (42%)

Query: 65  SSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
             SS    +   M  P    +TG + GIG A+A+     G  V  C+R A+ V +AV  L
Sbjct: 9   HHSSGLVPRGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGL 68

Query: 125 REEFGEQHVVQ 135
           R    +     
Sbjct: 69  RAAGHDVDGSS 79

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 54.8 bits (133), Expect = 4e-10
 Identities = 15/49 (30%), Positives = 30/49 (61%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ 131
            +ITG+++GIG A+A+   + G  + + +RS +R++     L +E G +
Sbjct: 5   AVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVE 53

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 55.3 bits (134), Expect = 4e-10
 Identities = 15/53 (28%), Positives = 29/53 (54%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
           +LITG++ GIG  +A+E   AG  +++ +R   R+++    +R+  G      
Sbjct: 7   ILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQV 59

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 54.8 bits (133), Expect = 5e-10
 Identities = 16/52 (30%), Positives = 27/52 (51%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
           +L+TG++ GIG   A  + + G  VI+  R+ E++      + EE G Q   
Sbjct: 15  ILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQW 66

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 54.5 bits (132), Expect = 6e-10
 Identities = 17/53 (32%), Positives = 27/53 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            LITG++ GIG A A+     G  V I +R  E++ +    L     + HV++
Sbjct: 10  ALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLE 62

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 54.8 bits (133), Expect = 6e-10
 Identities = 8/42 (19%), Positives = 19/42 (45%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
            ++ G T G+G A  +  ++ G  V++  R+   +    +  
Sbjct: 11  AIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF 52

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 54.7 bits (132), Expect = 7e-10
 Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 6/71 (8%)

Query: 68  SSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLK---AGDNVIICSRSAERVDSAVQSL 124
           SS  V R   +   ++LITG  +G+G  L K  L       ++    R+ E+    ++ L
Sbjct: 11  SSGLVPRGSHMN--SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK-ELEDL 67

Query: 125 REEFGEQHVVQ 135
            +     H+++
Sbjct: 68  AKNHSNIHILE 78

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 54.2 bits (131), Expect = 9e-10
 Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 53  YHSPIIRADSSSSSSSSSSVKREPMLPPY-------NVLITGSTKGIGYALAKEFLKAGD 105
           +H   + A +    S       EP            +VL+TG TKGIG  +A  F +AG 
Sbjct: 7   HHMGTLEAQTQGPGSMLVVESAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGA 66

Query: 106 NVIICSRSAERVDSAVQSLREEFGEQHVV 134
           NV + +RS   + S    L E      + 
Sbjct: 67  NVAVAARSPRELSSVTAELGELGAGNVIG 95

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 54.1 bits (131), Expect = 1e-09
 Identities = 11/53 (20%), Positives = 27/53 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
           V+I+G    +G  LA+   + G ++++ +R+ ER++   + + +       V 
Sbjct: 14  VVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVG 66

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 53.7 bits (130), Expect = 1e-09
 Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 23/77 (29%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-----------------------VDS 119
           VLITG+++GIG A A+     G  V + +R  +R                          
Sbjct: 8   VLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWAR 67

Query: 120 AVQSLREEFGEQHVVQN 136
           AV ++ E FGE   + N
Sbjct: 68  AVAAMEEAFGELSALVN 84

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 53.8 bits (130), Expect = 1e-09
 Identities = 10/53 (18%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
           NV+   +  GIG   ++E +K      +     E   +A+  L+    + ++ 
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN-PTALAELKAINPKVNIT 58

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 53.8 bits (130), Expect = 1e-09
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 3/75 (4%)

Query: 66  SSSSSSVKREPM--LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS 123
            SS    +   M        L+TG+T GIG  +A+   K G  V +C+R  E + + ++ 
Sbjct: 6   HSSGLVPRGSHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKE 65

Query: 124 LREEFGEQHVVQ-NV 137
           LRE   E      +V
Sbjct: 66  LREAGVEADGRTCDV 80

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 53.7 bits (130), Expect = 1e-09
 Identities = 17/42 (40%), Positives = 25/42 (59%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
            +ITG+T GIG A AK F+  G  V I  R  + +D+A+  +
Sbjct: 32  AVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI 73

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 53.7 bits (130), Expect = 1e-09
 Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 25/86 (29%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAER------------------------VD 118
           VL+TG+T G G  + + F++ G  VI   R  ER                        ++
Sbjct: 3   VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIE 62

Query: 119 SAVQSLREEFGEQHV-VQNVMLAKGM 143
             + SL  E+    + V N  LA GM
Sbjct: 63  EMLASLPAEWCNIDILVNNAGLALGM 88

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 53.7 bits (130), Expect = 1e-09
 Identities = 16/53 (30%), Positives = 22/53 (41%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            ++TG  + IG A      +AG  VII          AV+ LR E  +   V 
Sbjct: 16  AIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVV 68

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 53.4 bits (129), Expect = 2e-09
 Identities = 16/40 (40%), Positives = 24/40 (60%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ 122
            L+TG++ G G A+A+  + AGD VI  +R  E +D  V 
Sbjct: 8   WLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVA 47

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 53.3 bits (129), Expect = 2e-09
 Identities = 19/49 (38%), Positives = 28/49 (57%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ 131
           V++TG TKGIG  +A  F +AG NV +  RS   +D+ V  L +    +
Sbjct: 13  VVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGK 61

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 53.2 bits (129), Expect = 2e-09
 Identities = 15/44 (34%), Positives = 22/44 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           VL+TG+ KGIG    +     G  V+  SR+   +DS V+    
Sbjct: 10  VLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG 53

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 53.3 bits (128), Expect = 2e-09
 Identities = 10/53 (18%), Positives = 20/53 (37%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
             ++   T  +G   A      G  V++C R  ++  +A  S+ + F      
Sbjct: 121 KAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTA 173

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 53.1 bits (128), Expect = 2e-09
 Identities = 13/53 (24%), Positives = 21/53 (39%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
           V + G+   IG  +AK+F   G  V    R+ E++   V  +    G      
Sbjct: 10  VAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARS 62

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 53.3 bits (129), Expect = 2e-09
 Identities = 16/47 (34%), Positives = 25/47 (53%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
           +++TG  +GIG A  +    AG NV +  RSA       + + +EFG
Sbjct: 17  IIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG 63

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 53.0 bits (128), Expect = 2e-09
 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 24/81 (29%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAER---------------------VDSAV 121
           V+ITG++ GIG A+A+ F + G  +++ +R  ER                      D+A+
Sbjct: 19  VVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAI 78

Query: 122 QSLREEFGEQHVVQN---VML 139
               + +G    + N   +ML
Sbjct: 79  TRAEKIYGPADAIVNNAGMML 99

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 53.0 bits (128), Expect = 2e-09
 Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 2/85 (2%)

Query: 52  SYHSPIIRADSSSSSSSSSSVKREPM--LPPYNVLITGSTKGIGYALAKEFLKAGDNVII 109
           S H     +    +      + R  M        L+TG++ GIG A+A+  ++ G  V+ 
Sbjct: 2   SSHHHHHHSSGRENLYFQGHMARPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVG 61

Query: 110 CSRSAERVDSAVQSLREEFGEQHVV 134
           C+R+   ++      +       ++
Sbjct: 62  CARTVGNIEELAAECKSAGYPGTLI 86

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 53.1 bits (128), Expect = 2e-09
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 83  VLITGSTKGIGYALAKEFLK---AGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
            ++TG+++G G ALA +  +    G  +++ +RS   +    + L  +  +  VV
Sbjct: 9   CVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVV 63

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score = 53.0 bits (128), Expect = 2e-09
 Identities = 19/52 (36%), Positives = 26/52 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
            +ITGS+ GIG A A  F + G  V I  R AER++   Q +      +  V
Sbjct: 9   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNV 60

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score = 53.0 bits (128), Expect = 2e-09
 Identities = 16/52 (30%), Positives = 26/52 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
           V++TG++KGIG  +A    K G +V++ +RS E +   V    E        
Sbjct: 31  VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHY 82

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 52.9 bits (128), Expect = 2e-09
 Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 12/65 (18%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAER------------VDSAVQSLREEFGEQ 131
           L+  +++GIG A+A    + G  V IC+R+ E             +   +  L E+  E 
Sbjct: 23  LVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKDLDLLFEKVKEV 82

Query: 132 HVVQN 136
            ++  
Sbjct: 83  DILVL 87

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 53.0 bits (128), Expect = 3e-09
 Identities = 28/111 (25%), Positives = 42/111 (37%), Gaps = 28/111 (25%)

Query: 60  ADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER--- 116
           +       SS  V R   +    + ITG+T G G A A+ F +AG ++++  R  ER   
Sbjct: 2   SSHHHHHHSSGLVPRGSHMSS-TLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQA 60

Query: 117 -----------------------VDSAVQSLREEFGEQHV-VQNVMLAKGM 143
                                  + +AV +L EEF      + N  LA G 
Sbjct: 61  LAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGT 111

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 51.8 bits (125), Expect = 6e-09
 Identities = 13/53 (24%), Positives = 29/53 (54%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            ++TG+++GIG A+A++    G  V++ +R  E++ +  + +    GE     
Sbjct: 32  AVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHA 84

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 51.7 bits (125), Expect = 6e-09
 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ-NV 137
            +ITG+  GIG  +A  F  AG +V++   +A+  +  V  +++  G+    + ++
Sbjct: 14  AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDI 69

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 51.7 bits (125), Expect = 6e-09
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           L+TG+ KGIG    K    +G  V+  +R+   + S  +    
Sbjct: 11  LVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG 53

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score = 51.9 bits (125), Expect = 7e-09
 Identities = 17/48 (35%), Positives = 26/48 (54%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
           V+ITGS+ GIG + A  F K G  V I  R+ +R++   Q + +    
Sbjct: 29  VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVP 76

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 51.4 bits (124), Expect = 8e-09
 Identities = 14/53 (26%), Positives = 24/53 (45%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            L+TG+   IG A A    + G  + +   + E ++ A  S+RE+  E     
Sbjct: 10  CLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYV 62

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 51.4 bits (124), Expect = 8e-09
 Identities = 19/45 (42%), Positives = 27/45 (60%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           V+ITGS+ GIG   A  F + G NV I  RS+ER++   Q + + 
Sbjct: 9   VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKS 53

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 51.4 bits (124), Expect = 9e-09
 Identities = 13/53 (24%), Positives = 27/53 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            LITG++ GIG  +A  + +AG  V + +R ++ +      +    G+   ++
Sbjct: 35  ALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIR 87

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 51.4 bits (124), Expect = 1e-08
 Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ-NV 137
            ++TG+  GIG A+A  F KAG +V++    +E  ++   ++R+  G+   ++ NV
Sbjct: 15  AIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNV 70

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 51.0 bits (123), Expect = 1e-08
 Identities = 12/54 (22%), Positives = 26/54 (48%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
             L+TG+++GIG+ +A      G  V+  + S    +    S++E+  +   + 
Sbjct: 7   VALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLV 60

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 51.1 bits (123), Expect = 1e-08
 Identities = 16/52 (30%), Positives = 25/52 (48%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
            L+TG+ +GIG A A+  L  G  V +   + E       +L E+F  Q  +
Sbjct: 10  ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTL 61

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 51.1 bits (123), Expect = 1e-08
 Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 6/85 (7%)

Query: 53  YHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGD---NVII 109
           +HS  +    S  S    + +R   L    VLITG++ GIG A A E+L+A +    +I+
Sbjct: 9   HHSSFLVPRGSHMSQGRKAAER---LAKKTVLITGASAGIGKATALEYLEASNGDMKLIL 65

Query: 110 CSRSAERVDSAVQSLREEFGEQHVV 134
            +R  E+++   +++ +EF    V 
Sbjct: 66  AARRLEKLEELKKTIDQEFPNAKVH 90

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 51.0 bits (123), Expect = 1e-08
 Identities = 14/44 (31%), Positives = 22/44 (50%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
            +TG+  GIG  + + F  +G  +I+  R A  +D A Q L   
Sbjct: 15  AVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAA 58

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 50.8 bits (122), Expect = 2e-08
 Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 4/82 (4%)

Query: 37  TVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYAL 96
           +V  R    +L    +Y    +  D    S +S+     P+     V ITGS   +G AL
Sbjct: 108 SVSTRLPASTLTGMFAYRQTQLIEDLKFLSRTSTLFDGSPL----TVAITGSRGLVGRAL 163

Query: 97  AKEFLKAGDNVIICSRSAERVD 118
             +    G  VI   R   +  
Sbjct: 164 TAQLQTGGHEVIQLVRKEPKPG 185

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 16/86 (18%)

Query: 67  SSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS------------- 113
           +++++   +P     +VL+TG  +GIG A+A+     G  V +  R              
Sbjct: 2   TATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVD 61

Query: 114 ---AERVDSAVQSLREEFGEQHVVQN 136
              ++ VD A  ++ E  G   V+ +
Sbjct: 62  VTDSDAVDRAFTAVEEHQGPVEVLVS 87

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 19/53 (35%), Positives = 30/53 (56%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
             L+TGST+GIG A+A++   AG  VII   S ER  +  + +  ++G +   
Sbjct: 9   VSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHG 61

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 49.8 bits (120), Expect = 3e-08
 Identities = 18/53 (33%), Positives = 28/53 (52%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
           V++TG+  GIG A+AK+F      V+      +R++  VQ LR    E   V+
Sbjct: 10  VIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVK 62

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 50.0 bits (120), Expect = 3e-08
 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 1/70 (1%)

Query: 66  SSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSL 124
             SS  V R   +     ++TG+ K IG A+A +  + G  V+I    SAE   S    L
Sbjct: 9   HHSSGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADEL 68

Query: 125 REEFGEQHVV 134
            +E     VV
Sbjct: 69  NKERSNTAVV 78

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 49.9 bits (120), Expect = 3e-08
 Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 6/79 (7%)

Query: 62  SSSSSSSSSSVKREPMLPPYNV-----LITGSTKGIGYALAKEFLKAGDNVIICSRSAER 116
           SS     + ++  + M  P+++     ++TG+  GIG A+A  + +AG +V+   R+ + 
Sbjct: 8   SSGVDLGTENLYFQSMTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DG 66

Query: 117 VDSAVQSLREEFGEQHVVQ 135
           V      + +  G    V 
Sbjct: 67  VKEVADEIADGGGSAEAVV 85

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 50.0 bits (120), Expect = 3e-08
 Identities = 11/51 (21%), Positives = 28/51 (54%), Gaps = 6/51 (11%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII--CSRSAERVDSAVQSLREEFGEQ 131
           +L+TG ++GIG ++         + ++   +RS       ++ L+E++G++
Sbjct: 5   ILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEA----PLKKLKEKYGDR 51

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 49.6 bits (119), Expect = 3e-08
 Identities = 9/62 (14%), Positives = 19/62 (30%), Gaps = 15/62 (24%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSA---------------ERVDSAVQSLREE 127
           +L+ G +  +G  + K F     N I                     E + S ++ +  +
Sbjct: 25  ILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSK 84

Query: 128 FG 129
             
Sbjct: 85  SI 86

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 49.9 bits (120), Expect = 3e-08
 Identities = 14/44 (31%), Positives = 24/44 (54%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
             +TGS+ GIG+A+A+ + +AG +V I   S    + A    + 
Sbjct: 37  ASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKT 80

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 49.6 bits (119), Expect = 4e-08
 Identities = 16/80 (20%), Positives = 33/80 (41%), Gaps = 26/80 (32%)

Query: 80  PYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAER--------------------- 116
           P +V++TG+ +GIG  L ++ +K  +  ++I  +R  E+                     
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTC 62

Query: 117 ---VDSAVQSLREEFGEQHV 133
              +D+ V  + E  G   +
Sbjct: 63  DKSLDTFVSKVGEIVGSDGL 82

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 49.5 bits (119), Expect = 4e-08
 Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
            LITG   G+G AL   F+  G  V +  +SAER+           G   V
Sbjct: 8   ALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELE----VAHGGNAV 54

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 49.5 bits (119), Expect = 4e-08
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ-NV 137
            L+TG+ +GIG  +AK   K+  +VI  SR+ +  DS V  ++    E      +V
Sbjct: 47  ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDV 102

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 49.5 bits (119), Expect = 4e-08
 Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQ 131
           ML     ++TGST GIG  +A      G ++++     A  ++     L  + G +
Sbjct: 1   MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK 56

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 49.3 bits (118), Expect = 5e-08
 Identities = 16/53 (30%), Positives = 26/53 (49%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            ++TG   GIG A A EF + G  +++       ++ AV  LR +  + H V 
Sbjct: 34  AVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVV 86

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 49.1 bits (118), Expect = 6e-08
 Identities = 13/53 (24%), Positives = 25/53 (47%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            ++TG++ GIG A A  F + G  V++ +R+   +      +    GE   + 
Sbjct: 11  AIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALA 63

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 49.0 bits (117), Expect = 7e-08
 Identities = 14/58 (24%), Positives = 22/58 (37%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLA 140
           +LITG++ G G   A+    AG  V    R     +++       F   + V    L 
Sbjct: 8   ILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLE 65

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 48.6 bits (117), Expect = 8e-08
 Identities = 14/49 (28%), Positives = 26/49 (53%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ 131
            ++TG++ G G A+A  FL  GD V     SAE ++   ++    + ++
Sbjct: 5   AIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADK 53

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 48.7 bits (117), Expect = 8e-08
 Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 5/86 (5%)

Query: 53  YHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR 112
           +H  +   ++ +    S        L     ++TG+++GIG A+A E  + G  VI  + 
Sbjct: 5   HHHHMGTLEAQTQGPGSMDK----TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTAT 60

Query: 113 SAERVDSAVQSLREEFGEQHVVQ-NV 137
           +    +    + ++   E      NV
Sbjct: 61  TEAGAEGIGAAFKQAGLEGRGAVLNV 86

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 48.8 bits (117), Expect = 8e-08
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFG 129
            +ITGST GIG A+A+   KAG N+++    + + + +    +     
Sbjct: 28  AVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSS 75

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 48.7 bits (117), Expect = 8e-08
 Identities = 14/53 (26%), Positives = 26/53 (49%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            ++TGS  GIG A A+   + G  V++   +AE  ++  + +  + G    V 
Sbjct: 12  GIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVA 64

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 48.7 bits (117), Expect = 8e-08
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
            ++TG +KGIG A+A+   KAG  V I         + V  L   
Sbjct: 15  AIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENG 59

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 48.8 bits (117), Expect = 8e-08
 Identities = 10/45 (22%), Positives = 21/45 (46%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
            ++TG+  G+G A+A     AG  V +  R  + +      + ++
Sbjct: 31  AIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDD 75

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 48.3 bits (116), Expect = 9e-08
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 7/60 (11%)

Query: 83  VLITGSTKGIGYALAKEFLKAG-------DNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
           +LITG+ KGIG A+A EF +A          +++ SR+A  ++      R E      + 
Sbjct: 5   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 64

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 48.4 bits (116), Expect = 1e-07
 Identities = 13/53 (24%), Positives = 22/53 (41%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
           VLITG+  GIG   A EF K    +++   +   ++      +    + H   
Sbjct: 34  VLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV 86

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 48.6 bits (116), Expect = 1e-07
 Identities = 14/52 (26%), Positives = 23/52 (44%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
             +TG   G+G  L ++ L  G  V I     + +D A+ +L  E     V+
Sbjct: 11  AFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVM 62

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 48.4 bits (116), Expect = 1e-07
 Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 4/78 (5%)

Query: 62  SSSSSSSSSSVKREPM---LPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERV 117
           SS     + ++  + M         ++TG  +GIG  +A+    +G ++ I     AE V
Sbjct: 8   SSGVDLGTENLYFQSMMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGV 67

Query: 118 DSAVQSLREEFGEQHVVQ 135
              +  L         ++
Sbjct: 68  APVIAELSGLGARVIFLR 85

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 18/65 (27%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAER------------------VDSAVQSL 124
           V+ITG+++GIG  L + +      V+  SRS +                    D  V+  
Sbjct: 31  VVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPDIHTVAGDISKPETADRIVREG 90

Query: 125 REEFG 129
            E FG
Sbjct: 91  IERFG 95

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 4/53 (7%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
             LITG++ GIG A+A+   K G  VII   + E     ++SL     + + +
Sbjct: 16  TSLITGASSGIGSAIARLLHKLGSKVIISGSNEE----KLKSLGNALKDNYTI 64

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 48.2 bits (115), Expect = 1e-07
 Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 11/106 (10%)

Query: 30  HCRYGSSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGST 89
           H  + SS +  R +         +HS  +    S  ++ +  V           L+TG+ 
Sbjct: 6   HHHHHSSGLVPRGSHMGSSHHHHHHSSGLVPRGSHMTAPTVPV----------ALVTGAA 55

Query: 90  KGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVV 134
           K +G ++A+     G  V +   RSA   ++   +L        + 
Sbjct: 56  KRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAIT 101

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 48.0 bits (115), Expect = 1e-07
 Identities = 15/52 (28%), Positives = 26/52 (50%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
           ++TG+++GIG  +A +  KAG  V I  R  + +    Q  +   G+   V 
Sbjct: 9   VVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVV 60

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVVQ 135
            L+TGS++G+G A A    + G N++I  +RS +      + + +   +  VV+
Sbjct: 7   ALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVK 60

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 4/53 (7%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
             L+TG+T GIG A+A+ F   G  V +     +     ++ +  + G+   V
Sbjct: 29  KALVTGATGGIGEAIARCFHAQGAIVGLHGTRED----KLKEIAADLGKDVFV 77

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 48.0 bits (115), Expect = 1e-07
 Identities = 14/53 (26%), Positives = 21/53 (39%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            LITG+  GIG A A      G  V    R+   V+     +    G+   ++
Sbjct: 31  ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALE 83

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 14/52 (26%), Positives = 26/52 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
           VLITG   G+G A A      G  + +   S+E ++++  ++ E   +  V+
Sbjct: 16  VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVL 67

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 83  VLITG-STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ 131
           VL+T  +  GIG   A+  L  G +V+I      R+      L +    +
Sbjct: 25  VLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGR 74

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 14/41 (34%), Positives = 25/41 (60%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
           L+TG ++GIG A+A+  +  G  V I SR+ E    ++ ++
Sbjct: 6   LVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAV 46

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 47.9 bits (115), Expect = 2e-07
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVVQ 135
           V+ITGS+ G+G ++A  F      V++      +  +S ++ +++  GE   V+
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 16/70 (22%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS----------------AERVDSAVQSLRE 126
           VL+TG  +GIG A+A+ F  AGD V I  RS                 E+V+ A + + E
Sbjct: 24  VLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFLAVKCDITDTEQVEQAYKEIEE 83

Query: 127 EFGEQHVVQN 136
             G   V+  
Sbjct: 84  THGPVEVLIA 93

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 17/71 (23%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-----------------AERVDSAVQSLR 125
           V +TG+ KGIGYA A  F++AG  V    ++                 A +V    Q L 
Sbjct: 10  VWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLL 69

Query: 126 EEFGEQHVVQN 136
            E      + N
Sbjct: 70  AETERLDALVN 80

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 4/55 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNV 137
           VLITG+  GIG A  + F K G  ++ C      +  A     E  G   VV +V
Sbjct: 8   VLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAA----EAVGAHPVVMDV 58

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVVQ 135
           VLITGS++GIG A A+ F +AG  V +   ++   +D  + S+R + G+     
Sbjct: 10  VLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFA 63

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 12/55 (21%), Positives = 18/55 (32%), Gaps = 5/55 (9%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVM 138
           ++T      G   A    +AG  V     S ++ D       E F E +     M
Sbjct: 5   IVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL-----EAFAETYPQLKPM 54

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           VLITG+T G+G A A+     G ++++  R A  +    + +   
Sbjct: 3   VLITGATGGLGGAFARAL--KGHDLLLSGRRAGALAELAREVGAR 45

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 13/75 (17%), Positives = 28/75 (37%), Gaps = 2/75 (2%)

Query: 65  SSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQS 123
            +  + +     M       +TG   G+G A+++    AG  V +  S   + V + +  
Sbjct: 10  GTLEAQTQGPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMH 69

Query: 124 LREEFGEQHVVQ-NV 137
            R+   +      +V
Sbjct: 70  ERDAGRDFKAYAVDV 84

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 47.2 bits (113), Expect = 3e-07
 Identities = 12/45 (26%), Positives = 17/45 (37%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
            L+TG+  GIG A++      G  V  C          V+ L   
Sbjct: 10  ALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGP 54

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 47.2 bits (113), Expect = 3e-07
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            L+TGST GIG  +A+   +AG N+++          A+  +     +     
Sbjct: 7   ALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHP 57

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 47.1 bits (113), Expect = 3e-07
 Identities = 14/53 (26%), Positives = 24/53 (45%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            L+TG+ +GIG A+A   +K G  V I   +     +    + +  G    V+
Sbjct: 5   ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVK 57

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 47.2 bits (113), Expect = 3e-07
 Identities = 13/57 (22%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVVQ-NV 137
            LIT  TKG+G  + ++ L  G +V +        +++  ++ ++       VQ +V
Sbjct: 10  ALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADV 66

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 47.1 bits (113), Expect = 3e-07
 Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 4/53 (7%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
             L+TG+++GIG A+A+   + G  VI  + S        Q++ +  G+    
Sbjct: 11  VALVTGASRGIGKAIAELLAERGAKVIGTATSES----GAQAISDYLGDNGKG 59

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 47.2 bits (113), Expect = 3e-07
 Identities = 13/45 (28%), Positives = 26/45 (57%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           V+ITG+  G+G   A+E  + G  VI+  R   + ++A +++  +
Sbjct: 19  VVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQ 63

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 47.1 bits (113), Expect = 3e-07
 Identities = 14/45 (31%), Positives = 23/45 (51%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           +L+TG+  GIG A    F + G +++   R    +  AV +L  E
Sbjct: 9   ILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAE 53

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 46.5 bits (111), Expect = 4e-07
 Identities = 11/58 (18%), Positives = 27/58 (46%), Gaps = 7/58 (12%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV------DSAVQSLREEFGEQHVV 134
           +L+ G++  +G A+ +  L+    VI   R +  V        +++ + E+ G+   +
Sbjct: 6   ILLIGASGTLGSAVKER-LEKKAEVITAGRHSGDVTVDITNIDSIKKMYEQVGKVDAI 62

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 46.5 bits (111), Expect = 4e-07
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
           + ITGS  GIG AL +   +AG  VI   R    +++ +       G +  V 
Sbjct: 4   IAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADL---STPGGRETAVA 53

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 46.3 bits (111), Expect = 5e-07
 Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 2/63 (3%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVVQ 135
           M    + L+TG+++GIG ++A +  + G NV +  + S E+ ++ V+ ++ +  +   +Q
Sbjct: 1   MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQ 60

Query: 136 -NV 137
            NV
Sbjct: 61  ANV 63

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 46.5 bits (111), Expect = 5e-07
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121
           ++I+G   GIG A  K    AG  ++        V + +
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADL 42

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 46.3 bits (111), Expect = 5e-07
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
            L+TG+ +GIG A+A      G  VI+   +AE   +A  S+
Sbjct: 9   ALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI 50

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 46.2 bits (110), Expect = 6e-07
 Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVV 134
            L+TG+ K +G ++A+     G  V +   RSA   ++   +L        + 
Sbjct: 12  ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAIT 64

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 45.6 bits (109), Expect = 9e-07
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
            LITGS +GIG A A+ +++ G  V I     ER   A   +
Sbjct: 11  ALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI 52

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 45.6 bits (109), Expect = 9e-07
 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 2/57 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVVQ-NV 137
           V++TG+++GIG A+A    KAG  V++  +RSA+  +   + +    G+      +V
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDV 60

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 45.6 bits (109), Expect = 9e-07
 Identities = 17/55 (30%), Positives = 29/55 (52%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNV 137
            +ITG T GIG A+A +F++ G  V+I  R ++  + A +S+      Q    + 
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDS 63

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 45.6 bits (109), Expect = 1e-06
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVVQ-NV 137
             L+TG+++GIG A+A E   AG  V +  + SA   D  V ++    GE   V+ +V
Sbjct: 30  IALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADV 87

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 13/58 (22%), Positives = 31/58 (53%), Gaps = 2/58 (3%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVVQ-NV 137
             ++TGS++G+G A+A +    G N+++  S ++  +D+  +  +       V + +V
Sbjct: 7   TAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDV 64

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 13/44 (29%), Positives = 23/44 (52%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           V++TG  +GIG  + + F+ +G  V+IC +      +  Q L  
Sbjct: 12  VVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG 55

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 17/63 (26%), Positives = 36/63 (57%), Gaps = 2/63 (3%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVVQ 135
           ML     L+TG+++GIG A+A +  K G NV++  + + ++ +  V  +++   +   V+
Sbjct: 1   MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVR 60

Query: 136 -NV 137
            +V
Sbjct: 61  ADV 63

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 4/55 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNV 137
           +++T + +GIG A A  F + G  VI    +       +Q L +  G Q  V +V
Sbjct: 9   IILTAAAQGIGQAAALAFAREGAKVIATDINES----KLQELEKYPGIQTRVLDV 59

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 3/56 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ-NV 137
            +ITG   GIG A+A+ F   G ++ I          A  ++R        V+ +V
Sbjct: 10  AVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNLGRRVLTVKCDV 63

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
            LITG+  G G  +AK F K G  V+I  R     +     +
Sbjct: 12  ALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI 53

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 9/46 (19%), Positives = 15/46 (32%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
           L+T +    G A  +   + G  V+    S        +   E  G
Sbjct: 5   LVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPG 50

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 9/43 (20%), Positives = 19/43 (44%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR 125
            ++TG + GIG A+    ++ G  V+  S   +   +     +
Sbjct: 17  AIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK 59

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVVQ-NV 137
             +TG   GIG ++ +   K G  V+  C  ++ R    ++  +    + +  + NV
Sbjct: 16  AYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNV 72

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 44.0 bits (105), Expect = 3e-06
 Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGE 130
             LITG+++GIG A+A    + G  + I   ++ E+ +   +  R     
Sbjct: 3   KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSP 52

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 44.1 bits (105), Expect = 3e-06
 Identities = 11/34 (32%), Positives = 20/34 (58%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE 115
           N L+TG +KGIG A+ +  L+  ++ +I     +
Sbjct: 6   NYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQ 39

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 43.9 bits (104), Expect = 3e-06
 Identities = 13/58 (22%), Positives = 20/58 (34%), Gaps = 1/58 (1%)

Query: 62  SSSSSSSSSSVKREPM-LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118
            SS      S  RE +      VL+ G+   +   L  E    G   +   R+ E+  
Sbjct: 2   GSSHHHHHHSSGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGP 59

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 44.2 bits (105), Expect = 4e-06
 Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFG 129
            +ITG  + IG+++A    + G  V++    S       V  L     
Sbjct: 14  AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA 61

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 44.1 bits (105), Expect = 4e-06
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 3/75 (4%)

Query: 63  SSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ 122
            S+S+  SS  R   L     +ITG   GIG   AK F++ G  V+I   + +       
Sbjct: 2   GSTSTPDSSTNR---LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCN 58

Query: 123 SLREEFGEQHVVQNV 137
           ++        V  +V
Sbjct: 59  NIGSPDVISFVHCDV 73

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 43.7 bits (104), Expect = 4e-06
 Identities = 10/56 (17%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII---CSRSAERVDSAVQSLREEFGEQHVVQ 135
           ++I G  K +G   AK F     N+++    ++ ++  +     L ++  +  + Q
Sbjct: 14  IVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQ 69

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 43.7 bits (104), Expect = 5e-06
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           +LITG+++ +G   A   L+ G  VII  R+     ++V  LR+ 
Sbjct: 30  ILITGASQRVGLHCALRLLEHGHRVIISYRTEH---ASVTELRQA 71

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 43.7 bits (103), Expect = 5e-06
 Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 13/86 (15%)

Query: 63  SSSSSSSSSVKREPMLPPYN------VLITGSTKGIGYALAKEFLKAGDNVIICSRSAER 116
           +S +      +   MLP         V ITG+++GIG A+A +  K G N++I +++A+ 
Sbjct: 22  ASMTGGQQMGRGSAMLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQP 81

Query: 117 -------VDSAVQSLREEFGEQHVVQ 135
                  + +A + +    G+     
Sbjct: 82  HPKLLGTIYTAAEEIEAVGGKALPCI 107

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 43.7 bits (104), Expect = 5e-06
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 16/63 (25%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS----------------AERVDSAVQSLRE 126
           V++TG++ GIG A+A+ F+  G  VI  S                   ++V +++  + +
Sbjct: 11  VIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFK 70

Query: 127 EFG 129
           E+G
Sbjct: 71  EYG 73

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 43.8 bits (104), Expect = 5e-06
 Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 9/103 (8%)

Query: 35  SSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGY 94
            ST+RF      L A  +Y    +    ++ S+  +   +   L     ++TG+ +GIG 
Sbjct: 175 ESTMRFI-----LSAKSAYVDGQVFRVGAADSTPPADWDK--PLDGKVAVVTGAARGIGA 227

Query: 95  ALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNV 137
            +A+ F + G  V+            ++ + ++ G   +  +V
Sbjct: 228 TIAEVFARDGATVVAIDVDGAA--EDLKRVADKVGGTALTLDV 268

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 43.3 bits (103), Expect = 6e-06
 Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 1/75 (1%)

Query: 62  SSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSA 120
           SS     + ++  + M     VL+TG ++GIG A+ +   + G  V +  + + E  D+ 
Sbjct: 8   SSGVDLGTENLYFQSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAV 67

Query: 121 VQSLREEFGEQHVVQ 135
           V ++ E  GE   + 
Sbjct: 68  VAAITESGGEAVAIP 82

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 43.1 bits (102), Expect = 7e-06
 Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 3/60 (5%)

Query: 83  VLITGSTKGIGYALAKEFLK---AGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVML 139
           VLITG + GIG  LA            V    R  +      ++ R        ++ + L
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 43.7 bits (103), Expect = 7e-06
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 4/51 (7%)

Query: 82  NVLITGSTKG-IGYALAKEFLKAGDNVII-CSR-SAERVDSAVQSLREEFG 129
            VLITG+ KG IG  + +  L+ G  V++  SR S +  D   QS+  ++G
Sbjct: 478 YVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYY-QSIYAKYG 527

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 42.9 bits (102), Expect = 7e-06
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 83  VLITGS--TKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFG 129
           V++TG+   KG+G   A+   + G  V I  +  A+  +  V+ L + +G
Sbjct: 23  VVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYG 72

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 42.9 bits (102), Expect = 8e-06
 Identities = 8/45 (17%), Positives = 18/45 (40%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
            L++G  +G+G +  +  +  G  V+      E   +    L + 
Sbjct: 10  ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA 54

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 42.9 bits (102), Expect = 9e-06
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
           V+ITG  +G+G   A++ + AG  V++     E   +  + L
Sbjct: 8   VIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL 49

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 43.0 bits (102), Expect = 9e-06
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 7/60 (11%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-------RVDSAVQSLREEFGEQHVVQ 135
           + I+G ++GIG A+AK     G NV + ++SAE        + +A + + E  G+   + 
Sbjct: 12  MFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIV 71

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 42.5 bits (101), Expect = 1e-05
 Identities = 8/55 (14%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC--SRSAERVDSAVQSLREEFGEQHVVQ 135
            ++TG  +GIG  ++++    G ++ +    +  E+    ++ +     +   V 
Sbjct: 5   AMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVG 59

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 42.6 bits (100), Expect = 1e-05
 Identities = 11/57 (19%), Positives = 17/57 (29%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           M     VLI G T  IG  +    +  G    +  R     +     +   F +   
Sbjct: 1   MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGA 57

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
            +ITG+  GIG   ++   +AG  V++       +  A  S+
Sbjct: 14  AIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV 55

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 13/63 (20%), Positives = 20/63 (31%), Gaps = 16/63 (25%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAER----------------VDSAVQSLRE 126
            L+TG+  GIG A+      AG  V +  R+                    D    ++  
Sbjct: 31  ALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHLPGDLREAAYADGLPGAVAA 90

Query: 127 EFG 129
             G
Sbjct: 91  GLG 93

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 7/60 (11%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-------RVDSAVQSLREEFGEQHVVQ 135
           + ITG+++GIG A+A    + G NV I ++SA         + SA  ++    G+   ++
Sbjct: 9   LFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALK 68

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 12/55 (21%), Positives = 26/55 (47%), Gaps = 5/55 (9%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNV 137
            ++TG+T G+G  + K+  +    V    R+ E     + +L E  G + +  ++
Sbjct: 8   AVVTGATGGMGIEIVKDLSRDHI-VYALGRNPEH----LAALAEIEGVEPIESDI 57

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 41.9 bits (99), Expect = 2e-05
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR 125
           V++ G    +G A+ + F K G  V+    SA     +   + 
Sbjct: 6   VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVD 48

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 42.1 bits (100), Expect = 2e-05
 Identities = 11/42 (26%), Positives = 21/42 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
            ++TG+  GIG A+A+     G +V+      +  D+A   +
Sbjct: 32  AIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI 73

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVVQ 135
           +++ G+ + IG A A  F + G NV++  + +AE   +AV  + +       ++
Sbjct: 11  IVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIK 64

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 41.3 bits (98), Expect = 2e-05
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 5/55 (9%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNV 137
           VL+TG  +GIG A+A+ F + G  V +C    E  + A     E  G      ++
Sbjct: 9   VLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA-----EAIGGAFFQVDL 58

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* Length = 215

 Score = 41.1 bits (96), Expect = 3e-05
 Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 5/77 (6%)

Query: 50  SKSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVII 109
            +    P+I      S SS + V  E       V I GS      +LA   + +G  V++
Sbjct: 2   PEEMDKPLISLHLVDSDSSLAKVPDEAP----KVGILGSGD-FARSLATRLVGSGFKVVV 56

Query: 110 CSRSAERVDSAVQSLRE 126
            SR+ +R      S  +
Sbjct: 57  GSRNPKRTARLFPSAAQ 73

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 41.0 bits (97), Expect = 4e-05
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
            ++TG   GIG A A+ F K G  V++   + +        +
Sbjct: 30  CIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI 71

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 40.5 bits (96), Expect = 5e-05
 Identities = 10/42 (23%), Positives = 14/42 (33%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
            L+TG   G+G  + K  L  G  V     +          L
Sbjct: 9   ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL 50

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 40.4 bits (95), Expect = 6e-05
 Identities = 8/43 (18%), Positives = 13/43 (30%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR 125
           VL+ G    +G    + F      V           SA   ++
Sbjct: 10  VLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVK 52

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* Length = 212

 Score = 40.2 bits (93), Expect = 6e-05
 Identities = 11/50 (22%), Positives = 21/50 (42%)

Query: 85  ITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
           + G T  +G  LA      G  +++ SR  E+ ++     R   G+  + 
Sbjct: 5   LLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASIT 54

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 40.2 bits (95), Expect = 6e-05
 Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVVQ 135
           ++TG+++GIG A+A      G  V+I  +  A   +     +    G+    Q
Sbjct: 31  IVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQ 83

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 63  SSSSSSSSSVKREPMLPPYN--VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDS 119
           + S+  +SS   +   P      L TG+ +GIG  +A E  + G +V++    S++  + 
Sbjct: 2   APSADITSSGPSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEE 61

Query: 120 AVQSLREEFGEQHVVQ 135
            V  L++   +   +Q
Sbjct: 62  VVAELKKLGAQGVAIQ 77

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 39.5 bits (93), Expect = 1e-04
 Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 7/83 (8%)

Query: 60  ADSSSSSSSSSSVKREPMLPPYN------VLITGSTKGIGYALAKEFLKAGDNVII-CSR 112
           A +     S       P+ P          L+TG+ +GIG  +A E  + G  VI+  + 
Sbjct: 3   AVTQPRGESKYDAIPGPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYAN 62

Query: 113 SAERVDSAVQSLREEFGEQHVVQ 135
           S E  +  V ++++   +   V+
Sbjct: 63  STESAEEVVAAIKKNGSDAACVK 85

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 39.2 bits (92), Expect = 1e-04
 Identities = 10/38 (26%), Positives = 16/38 (42%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119
            + I GST  +G +L K        +   +R  E+V  
Sbjct: 2   KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ 39

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 9/42 (21%), Positives = 19/42 (45%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
            +ITG   G+G A A+  +  G + ++        ++  + L
Sbjct: 15  AVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL 56

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 12/78 (15%), Positives = 27/78 (34%), Gaps = 24/78 (30%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAER------------------------VD 118
            +++G   G+G A  +     G  V+I   +AE+                        V 
Sbjct: 33  AIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVL 92

Query: 119 SAVQSLREEFGEQHVVQN 136
           +A+++  +    ++ V  
Sbjct: 93  AAIEAANQLGRLRYAVVA 110

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 6/82 (7%)

Query: 60  ADSSSSSSSSSSVKREPMLPPYN-----VLITGSTKGIGYALAKEFLKAGDNVII-CSRS 113
             SS     + ++  + M+   +       +TG ++GIG A+AK     G  V +    +
Sbjct: 6   HHSSGVDLGTENLYFQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNA 65

Query: 114 AERVDSAVQSLREEFGEQHVVQ 135
           AER  + V  + +  G    ++
Sbjct: 66  AERAQAVVSEIEQAGGRAVAIR 87

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 38.5 bits (89), Expect = 3e-04
 Identities = 8/40 (20%), Positives = 17/40 (42%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121
            + + G+T   G A+  E  + G  V+   R  ++    +
Sbjct: 2   KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL 41

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 38.4 bits (90), Expect = 3e-04
 Identities = 8/42 (19%), Positives = 18/42 (42%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
            ++TG++ G+G A+ +   + G  V+         +     L
Sbjct: 10  FIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL 51

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 38.3 bits (90), Expect = 4e-04
 Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVVQ 135
           L+TGS +GIG A+A    + G  V++  + S +  +  V  ++    +   ++
Sbjct: 22  LVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIK 74

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 37.7 bits (88), Expect = 4e-04
 Identities = 10/38 (26%), Positives = 18/38 (47%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119
            + I G+T   G     + ++AG  V +  R + R+ S
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS 42

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 37.6 bits (87), Expect = 5e-04
 Identities = 9/39 (23%), Positives = 16/39 (41%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA 120
            + I G+T   G  + +E    G  V    R+A ++   
Sbjct: 2   KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT 40

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 37.7 bits (87), Expect = 6e-04
 Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 7/62 (11%)

Query: 65  SSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
           + S   S K         VLI G+T  IG  +A   L A     I +R   R  S  +  
Sbjct: 2   TVSPVPSPKG-------RVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIF 54

Query: 125 RE 126
           + 
Sbjct: 55  KA 56

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	147
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.52
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.5
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.47
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.44
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.44
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.43
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.41
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.38
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.38
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.38
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.36
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.35
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.34
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.34
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.34
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.34
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.34
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.33
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.33
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.33
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.32
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.32
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.32
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.32
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.31
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.31
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.31
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.31
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.31
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.31
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.3
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.3
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.3
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.29
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.29
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.29
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.29
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.29
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.28
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.28
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.28
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.27
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.27
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.27
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.27
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.27
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.26
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.26
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.26
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.26
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.26
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.26
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.26
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.26
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.26
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.26
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.26
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.26
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.26
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.26
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.26
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.26
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.26
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.26
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.26
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.25
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.25
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.25
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.25
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.25
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.24
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.24
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.24
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.24
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.24
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.24
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.24
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.24
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.24
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.23
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.23
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.23
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.23
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.23
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.23
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.23
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.23
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.23
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.23
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.22
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.22
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.22
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.21
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.21
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.21
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.21
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.21
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.21
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.21
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.21
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.2
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.2
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.2
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.2
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.2
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.19
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.19
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.19
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.19
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.18
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.18
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.18
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.18
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.18
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.17
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.17
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.17
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.17
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.17
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.17
1spx_A	278	Short-chain reductase family member (5L265); paral	99.17
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.17
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.17
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.17
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.16
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.16
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.16
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.16
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.16
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.16
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.16
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.15
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.15
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.15
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.15
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.15
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.15
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.15
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.15
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.15
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.15
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.14
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.14
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.13
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.13
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.13
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.13
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.12
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.12
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.12
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.11
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.11
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.1
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.1
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.09
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.09
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.09
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.09
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.08
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.08
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.07
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.07
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.07
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.07
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.06
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.06
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.06
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.06
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.05
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.05
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.05
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.04
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.04
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.04
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.02
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.02
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.02
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	98.99
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	98.98
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	98.98
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	98.97
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	98.96
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	98.95
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	98.94
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	98.93
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	98.93
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	98.93
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	98.92
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	98.92
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	98.92
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	98.9
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	98.89
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	98.89
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	98.88
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	98.86
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	98.86
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	98.85
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	98.84
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.82
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	98.81
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	98.8
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	98.8
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	98.8
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	98.79
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	98.78
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	98.78
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	98.78
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	98.77
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	98.76
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	98.76
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	98.74
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	98.73
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	98.72
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	98.72
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	98.7
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	98.7
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	98.7
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	98.69
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	98.69
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	98.69
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	98.67
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	98.65
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	98.65
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	98.63
1xq6_A	253	Unknown protein; structural genomics, protein stru	98.62
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	98.62
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	98.62
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	98.62
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.61
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	98.61
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	98.6
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	98.57
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	98.57
4e4y_A	244	Short chain dehydrogenase family protein; structur	98.56
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	98.55
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.54
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	98.54
4f6c_A	427	AUSA reductase domain protein; thioester reductase	98.54
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	98.53
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	98.52
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	98.52
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	98.51
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	98.51
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	98.5
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	98.5
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	98.5
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	98.48
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	98.46
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	98.45
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	98.45
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	98.44
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.42
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	98.41
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	98.41
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	98.4
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	98.4
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	98.39
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	98.38
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	98.37
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	98.35
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	98.35
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	98.33
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	98.32
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	98.3
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	98.29
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	98.28
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	98.27
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	98.27
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	98.27
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	98.25
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	98.25
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	98.24
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.24
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	98.24
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	98.22
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	98.22
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	98.21
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	98.2
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	98.19
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.18
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	98.16
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	98.16
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	98.14
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.13
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	98.12
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	98.11
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	98.1
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	98.1
4f6l_B	508	AUSA reductase domain protein; thioester reductase	98.07
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	98.07
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	98.06
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	98.06
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	98.06
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.01
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	98.01
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	98.0
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	98.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	97.98
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	97.98
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	97.97
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.96
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	97.94
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	97.93
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	97.93
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.92
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	97.92
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	97.92
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	97.91
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	97.89
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	97.89
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	97.86
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	97.85
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	97.85
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.83
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	97.82
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.82
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.82
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.81
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.8
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.79
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	97.77
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	97.75
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.72
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	97.7
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	97.63
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.63
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	97.62
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	97.61
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.61
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.6
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	97.59
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.58
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.55
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.55
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.54
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.54
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.5
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.5
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.43
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	97.42
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.41
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.39
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.37
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.3
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.29
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.27
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.25
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.24
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.19
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	97.18
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.18
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.16
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.16
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.14
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.1
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.08
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.08
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.07
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	97.07
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.06
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.05
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.04
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.04
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	96.94
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	96.89
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.88
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	96.82
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.76
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	96.74
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	96.7
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.68
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.65
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	96.65
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.62
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	96.58
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.58
3c85_A	183	Putative glutathione-regulated potassium-efflux S	96.57
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.47
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.46
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	96.45
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	96.42
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.37
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.35
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	96.34
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.31
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.31
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.31
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.31
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	96.27
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	96.27
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	96.22
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.14
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.14
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.12
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	96.11
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.11
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.07
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	96.04
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	95.99
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	95.96
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	95.94
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.88
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	95.85
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	95.85
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	95.82
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	95.82
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	95.8
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	95.76
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	95.76
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	95.74
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.72
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	95.68
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	95.66
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	95.64
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	95.63
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.63
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	95.6
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.6
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	95.58
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	95.57
3tl2_A	315	Malate dehydrogenase; center for structural genomi	95.57
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	95.56
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	95.55
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	95.54
3ado_A	319	Lambda-crystallin; L-gulonate 3-dehydrogenase, str	95.52
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	95.51
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.49
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	95.47
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	95.45
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	95.44
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	95.43
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	95.43
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	95.41
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	95.41
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	95.4
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	95.39
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.37
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	95.37
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	95.35
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	95.35
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	95.34
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	95.33
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	95.32
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	95.29
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	95.28
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	95.23
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.2
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	95.18
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	95.18
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	95.17
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	95.17
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	95.16
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	95.13
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	95.13
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	95.09
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	95.09
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	95.08
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	95.05
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	95.04
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	95.04
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	95.03
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	95.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	94.99
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	94.98
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	94.97
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	94.88
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	94.84
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	94.81
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	94.8
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	94.79
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	94.77
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	94.77
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	94.74
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	94.72
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	94.68
1zej_A	293	HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural	94.67
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	94.66
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	94.63
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	94.62
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	94.61
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	94.57
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	94.56
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	94.53
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	94.49
1z82_A	335	Glycerol-3-phosphate dehydrogenase; TM0378, struct	94.48
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	94.43
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	94.4
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	94.27
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	94.26
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	94.25
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	94.24
4g65_A	461	TRK system potassium uptake protein TRKA; structur	94.21
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	94.19
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	94.18

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.52  E-value=1.6e-14  Score=111.95  Aligned_cols=71  Identities=23%  Similarity=0.247  Sum_probs=63.2

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .+|+|+||+++||||++|||+++++.|+++|++|++++|+++.+++.++++.+..+ ....+.+|++|+.++
T Consensus         3 ~~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~-~~~~~~~Dv~~~~~v   73 (255)
T 4g81_D            3 ALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGY-DAHGVAFDVTDELAI   73 (255)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHH
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHH
Confidence            45789999999999999999999999999999999999999999999999887644 466788999987654

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.50  E-value=3.7e-14  Score=109.89  Aligned_cols=69  Identities=28%  Similarity=0.350  Sum_probs=61.8

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ++|+||+++||||++|||+++|+.|+++|++|++++|+++.+++..+++.+. +.....+.+|++|+.++
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~-g~~~~~~~~Dvt~~~~v   71 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM-GKEVLGVKADVSKKKDV   71 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTSHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHH
Confidence            4689999999999999999999999999999999999999999999998765 44567889999987654

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.47  E-value=7.5e-14  Score=107.45  Aligned_cols=71  Identities=13%  Similarity=0.127  Sum_probs=60.8

Q ss_pred             CCCCCCCEEEEeCCcC--hHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           75 EPMLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~--GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +++|+||+++|||+++  |||+++|+.|+++|++|++++|+++.++++.+++.+..+.....+.+|++++.++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   73 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEV   73 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHH
Confidence            4679999999999765  9999999999999999999999999888887777665555567889999987654

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.44  E-value=7.3e-13  Score=102.59  Aligned_cols=72  Identities=26%  Similarity=0.361  Sum_probs=63.4

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ....+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....+....++.+|++|..++
T Consensus        21 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (277)
T 4fc7_A           21 CPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAV   92 (277)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHH
T ss_pred             CccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHH
Confidence            345689999999999999999999999999999999999999998888888777677778889999986543

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.44  E-value=4.5e-13  Score=103.47  Aligned_cols=70  Identities=23%  Similarity=0.348  Sum_probs=58.3

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCcc
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKWQ  146 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~~  146 (147)
                      ..|+|+||+++||||++|||+++++.|+++|++|++.+|+.+  ++..+++.+. +.....+.+|++|+..++
T Consensus         3 n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~-g~~~~~~~~Dv~d~~~v~   72 (247)
T 4hp8_A            3 NPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKD-GGNASALLIDFADPLAAK   72 (247)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT-TCCEEEEECCTTSTTTTT
T ss_pred             CCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHh-CCcEEEEEccCCCHHHHH
Confidence            457899999999999999999999999999999999999864  3455666655 455678899999977653

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.43  E-value=2.6e-13  Score=106.11  Aligned_cols=66  Identities=32%  Similarity=0.406  Sum_probs=55.3

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ..|+||+++||||++|||+++|+.|+++|++|++++|+++.+++.++++    +.....+.+|++|+.++
T Consensus        25 ~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~----g~~~~~~~~Dv~~~~~v   90 (273)
T 4fgs_A           25 QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI----GGGAVGIQADSANLAEL   90 (273)
T ss_dssp             CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CTTCEEEECCTTCHHHH
T ss_pred             chhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----CCCeEEEEecCCCHHHH
Confidence            3589999999999999999999999999999999999998887776655    44456677888776543

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.41  E-value=7.9e-13  Score=101.87  Aligned_cols=72  Identities=32%  Similarity=0.433  Sum_probs=64.4

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .++++++|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++.+..+....++.+|++|..++
T Consensus        14 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v   85 (266)
T 4egf_A           14 GVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAP   85 (266)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHH
Confidence            345789999999999999999999999999999999999999999998888876677778899999997654

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.38  E-value=8.7e-13  Score=101.40  Aligned_cols=71  Identities=28%  Similarity=0.367  Sum_probs=61.8

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+..+....++.+|++|..++
T Consensus         5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v   75 (262)
T 3pk0_A            5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQC   75 (262)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHH
Confidence            45789999999999999999999999999999999999999999888888765435567889999986543

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.38  E-value=1.6e-12  Score=99.96  Aligned_cols=70  Identities=27%  Similarity=0.422  Sum_probs=62.0

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCe-EEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ-HVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~-~~~~~~dv~~~~~~  145 (147)
                      +++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.+..+.. ..++.+|++|+.++
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v   74 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQV   74 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHH
Confidence            56889999999999999999999999999999999999999999988888766554 77889999986543

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.38  E-value=1.6e-12  Score=100.24  Aligned_cols=73  Identities=26%  Similarity=0.426  Sum_probs=59.5

Q ss_pred             CCCCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           72 VKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        72 ~~~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ..+...+++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++....+....++.+|+++..+
T Consensus        13 ~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~   85 (267)
T 1vl8_A           13 MKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEE   85 (267)
T ss_dssp             ----CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHH
T ss_pred             CCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            3455678899999999999999999999999999999999999888888777744445556778899988654

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.36  E-value=1.4e-12  Score=101.17  Aligned_cols=69  Identities=19%  Similarity=0.222  Sum_probs=54.2

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .++|+||+++||||++|||+++++.|+++|++|++++|+.+..+ .++++.+..+ ....+.+|++|+.++
T Consensus         2 ~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~~-~~~~~~~Dv~~~~~v   70 (258)
T 4gkb_A            2 DLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQP-RATYLPVELQDDAQC   70 (258)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHCT-TCEEEECCTTCHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcCC-CEEEEEeecCCHHHH
Confidence            36799999999999999999999999999999999999877643 3344544433 355677888776543

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.35  E-value=1.9e-12  Score=99.10  Aligned_cols=69  Identities=20%  Similarity=0.242  Sum_probs=59.6

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.+. +....++.+|++|..++
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v   71 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA-GGRIVARSLDARNEDEV   71 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-TCEEEEEECCTTCHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECcCCCHHHH
Confidence            4578999999999999999999999999999999999999999988888765 45577889999986543

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.34  E-value=1.9e-12  Score=100.69  Aligned_cols=70  Identities=19%  Similarity=0.211  Sum_probs=58.5

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+..+....++.+|++|..++
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v   98 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQV   98 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHH
Confidence            4578999999999999999999999999999999999999999988888877666667889999986543

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.34  E-value=1.2e-12  Score=102.62  Aligned_cols=71  Identities=30%  Similarity=0.338  Sum_probs=61.0

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .++++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.+..+....++.+|++|..+
T Consensus        35 ~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~  105 (293)
T 3rih_A           35 VMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGS  105 (293)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHH
Confidence            45678999999999999999999999999999999999999998888888766543456778899988654

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.34  E-value=8.6e-12  Score=97.35  Aligned_cols=71  Identities=30%  Similarity=0.327  Sum_probs=56.5

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ...++++|+++||||++|||++++++|+++|++|++++|+.+...+...+..+..+....++.+|++|+.+
T Consensus        41 ~~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~  111 (291)
T 3ijr_A           41 GSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQH  111 (291)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHH
Confidence            34568999999999999999999999999999999999988755544444444455556777888887554

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.34  E-value=2.2e-12  Score=100.04  Aligned_cols=67  Identities=22%  Similarity=0.385  Sum_probs=58.7

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.+..+....++.+|+++.
T Consensus         8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~   74 (311)
T 3o26_A            8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDP   74 (311)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSC
T ss_pred             ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCc
Confidence            3568899999999999999999999999999999999999999999999877666678889999987

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.34  E-value=4.7e-12  Score=96.95  Aligned_cols=69  Identities=32%  Similarity=0.502  Sum_probs=59.4

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +++++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++.+.++....++.+|++|..+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~   71 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEG   71 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            457899999999999999999999999999999999999888888888766545556778899998654

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.33  E-value=4.7e-12  Score=96.66  Aligned_cols=68  Identities=26%  Similarity=0.396  Sum_probs=59.6

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEccc--CCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVML--AKGM  143 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv--~~~~  143 (147)
                      ..+++|+++||||++|||++++++|+++|++|++++|+++.+++..+++.+..+....++.+|+  ++..
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   77 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSE   77 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHH
Confidence            3578999999999999999999999999999999999999999888888877665567778888  6543

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.33  E-value=2.1e-12  Score=99.77  Aligned_cols=68  Identities=16%  Similarity=0.243  Sum_probs=57.8

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ..+++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++    +....++.+|++|..++
T Consensus        24 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v   91 (281)
T 3ppi_A           24 TIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL----GNRAEFVSTNVTSEDSV   91 (281)
T ss_dssp             CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CTTEEEEECCTTCHHHH
T ss_pred             hhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CCceEEEEcCCCCHHHH
Confidence            445689999999999999999999999999999999999998887776665    44567888999886543

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.33  E-value=2.4e-12  Score=99.89  Aligned_cols=71  Identities=20%  Similarity=0.283  Sum_probs=60.8

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +.+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +....++.+|++|..++
T Consensus        26 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v   96 (276)
T 3r1i_A           26 DLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV-GGKALPIRCDVTQPDQV   96 (276)
T ss_dssp             GGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-TCCCEEEECCTTCHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHH
Confidence            456789999999999999999999999999999999999999888888888664 34466788999886543

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.32  E-value=5.2e-12  Score=94.98  Aligned_cols=67  Identities=24%  Similarity=0.394  Sum_probs=60.0

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+..+....++.+|++|..++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   67 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESV   67 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHH
Confidence            3689999999999999999999999999999999999999998888866677788889999986543

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.32  E-value=4.8e-12  Score=97.24  Aligned_cols=69  Identities=17%  Similarity=0.398  Sum_probs=59.8

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ..+++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++.+. +....++.+|++|..++
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v   75 (264)
T 3ucx_A            7 GLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT-GRRALSVGTDITDDAQV   75 (264)
T ss_dssp             CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHH
T ss_pred             CCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHH
Confidence            4578999999999999999999999999999999999999998888888765 44467788999986543

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.32  E-value=5.4e-12  Score=96.63  Aligned_cols=72  Identities=19%  Similarity=0.177  Sum_probs=61.9

Q ss_pred             CCCCCCCCEEEEeCCc-ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           74 REPMLPPYNVLITGST-KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s-~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ..+.+++|+++||||+ +|||++++++|+++|++|++++|+.+.+++..+++.+..+....++.+|++|..++
T Consensus        16 ~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v   88 (266)
T 3o38_A           16 GHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAV   88 (266)
T ss_dssp             CCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHH
T ss_pred             cccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHH
Confidence            4556899999999997 59999999999999999999999999999888888666555677889999986543

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.32  E-value=4e-12  Score=98.40  Aligned_cols=71  Identities=23%  Similarity=0.312  Sum_probs=58.9

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCC--eEEEEEcccCCCCC
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE--QHVVQNVMLAKGMK  144 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~--~~~~~~~dv~~~~~  144 (147)
                      +.+++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++.+....  ...++.+|++|..+
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~   77 (281)
T 3svt_A            5 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDE   77 (281)
T ss_dssp             ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHH
T ss_pred             CccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHH
Confidence            345688999999999999999999999999999999999999998888888764331  56778899998654

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.31  E-value=4.6e-12  Score=97.03  Aligned_cols=69  Identities=23%  Similarity=0.386  Sum_probs=59.8

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+. +....++.+|++|..+
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~   75 (256)
T 3gaf_A            7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA-GGKAIGLECNVTDEQH   75 (256)
T ss_dssp             TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT-TCCEEEEECCTTCHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEECCCCCHHH
Confidence            45689999999999999999999999999999999999999988888888664 4446678899988654

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.31  E-value=4.3e-12  Score=96.98  Aligned_cols=70  Identities=19%  Similarity=0.263  Sum_probs=58.9

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhC--CeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG--EQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~--~~~~~~~~dv~~~~~~  145 (147)
                      ..+++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.+..+  ....++.+|++|..++
T Consensus         3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   74 (250)
T 3nyw_A            3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKA   74 (250)
T ss_dssp             --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHH
Confidence            357889999999999999999999999999999999999999988888877632  4467788999986543

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.31  E-value=5.2e-12  Score=97.63  Aligned_cols=67  Identities=24%  Similarity=0.427  Sum_probs=58.4

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +.+|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++... +....++.+|++|..++
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv~d~~~v   68 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA-GGTALAQVLDVTDRHSV   68 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-TCEEEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHH
Confidence            57899999999999999999999999999999999999999888888765 45567788999986543

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.31  E-value=1.8e-11  Score=95.60  Aligned_cols=71  Identities=25%  Similarity=0.279  Sum_probs=53.1

Q ss_pred             CCCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh--HHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA--ERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        73 ~~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~--~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ...+++++|+++||||++|||++++++|+++|++|++++|+.  +..++..+++. ..+....++.+|++|+.+
T Consensus        42 ~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~d~~~  114 (294)
T 3r3s_A           42 VGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIE-ECGRKAVLLPGDLSDESF  114 (294)
T ss_dssp             CCCSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHH-HTTCCEEECCCCTTSHHH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHH-HcCCcEEEEEecCCCHHH
Confidence            345678999999999999999999999999999999999873  33444433333 334455667777777543

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.31  E-value=8.3e-12  Score=95.49  Aligned_cols=68  Identities=25%  Similarity=0.444  Sum_probs=58.2

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +++++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++.+. +....++.+|++|..+
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   72 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK-GFKVEASVCDLSSRSE   72 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCEEEEEECCTTCHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHH
Confidence            4578999999999999999999999999999999999998888887777654 4456678899988643

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.31  E-value=7.3e-12  Score=95.12  Aligned_cols=68  Identities=21%  Similarity=0.317  Sum_probs=59.4

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+. +....++.+|++|..+
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   72 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD-GGTAISVAVDVSDPES   72 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCEEEEEECCTTSHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHH
Confidence            5678999999999999999999999999999999999999998888888665 4456778899998654

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.30  E-value=7.2e-12  Score=96.19  Aligned_cols=70  Identities=19%  Similarity=0.244  Sum_probs=58.8

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHh-CCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF-GEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~~~dv~~~~~~  145 (147)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+.. +....++.+|++|..++
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   79 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQV   79 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHH
Confidence            45789999999999999999999999999999999999998888888776653 33466788999986543

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.30  E-value=7.6e-12  Score=96.25  Aligned_cols=70  Identities=29%  Similarity=0.411  Sum_probs=60.6

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCC-eEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE-QHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~-~~~~~~~dv~~~~~  144 (147)
                      .+.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+.++. ....+.+|++++..
T Consensus         5 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~   75 (267)
T 3t4x_A            5 HMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQG   75 (267)
T ss_dssp             CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHH
T ss_pred             ccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHH
Confidence            35688999999999999999999999999999999999999999998998877643 45667889987543

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.30  E-value=6.3e-12  Score=96.39  Aligned_cols=71  Identities=20%  Similarity=0.344  Sum_probs=59.8

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .+..+++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.+. +....++.+|+++..++
T Consensus        23 ~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v   93 (262)
T 3rkr_A           23 HMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA-GGEAESHACDLSHSDAI   93 (262)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCEEEEEECCTTCHHHH
T ss_pred             hhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-CCceeEEEecCCCHHHH
Confidence            345688999999999999999999999999999999999999998888887654 44567788999886543

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.29  E-value=7.9e-12  Score=96.66  Aligned_cols=70  Identities=19%  Similarity=0.279  Sum_probs=58.0

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +...+++|+++||||++|||++++++|+++|++|++++|+++.+++..+++.+. +.....+.+|++|..+
T Consensus        22 m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~   91 (270)
T 3ftp_A           22 MDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA-GLEGRGAVLNVNDATA   91 (270)
T ss_dssp             -CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-TCCCEEEECCTTCHHH
T ss_pred             cccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEEeCCCHHH
Confidence            344688999999999999999999999999999999999999888887777665 3335667788887554

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.29  E-value=1.1e-11  Score=96.63  Aligned_cols=69  Identities=19%  Similarity=0.202  Sum_probs=58.6

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEe-CChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~-r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      ++++++|+++|||+++|||+++++.|+++|++|++++ |+.+.+++..+++.+..+....++.+|+++..
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~   73 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVA   73 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSC
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcc
Confidence            3467899999999999999999999999999999999 99999988888887455666778899999876

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.29  E-value=1.6e-11  Score=95.22  Aligned_cols=67  Identities=27%  Similarity=0.347  Sum_probs=58.0

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh-----------------HHHHHHHHHHHHHhCCeEEEEE
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-----------------ERVDSAVQSLREEFGEQHVVQN  136 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~-----------------~~~~~~~~~l~~~~~~~~~~~~  136 (147)
                      +.++|+||+++||||++|||+++++.|+++|++|++++|+.                 +..++.++++.+++++.+++++
T Consensus         5 dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVn   84 (261)
T 4h15_A            5 EFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGLPEELFVEADLTTKEGCAIVAEATRQRLGGVDVIVH   84 (261)
T ss_dssp             CCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTSCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEE
T ss_pred             hccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            44689999999999999999999999999999999999853                 3456677888889999999998


Q ss_pred             cccC
Q 032110          137 VMLA  140 (147)
Q Consensus       137 ~dv~  140 (147)
                      +...
T Consensus        85 nAG~   88 (261)
T 4h15_A           85 MLGG   88 (261)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            7653

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.29  E-value=1.7e-11  Score=95.18  Aligned_cols=71  Identities=14%  Similarity=0.223  Sum_probs=61.3

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +...+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+.++....++.+|++|..+
T Consensus        20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~   90 (302)
T 1w6u_A           20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDM   90 (302)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHH
Confidence            34468899999999999999999999999999999999999988888888877656557788999988654

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.29  E-value=3.7e-12  Score=98.56  Aligned_cols=69  Identities=26%  Similarity=0.364  Sum_probs=59.5

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .++++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+. +....++.+|++|..+
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv~d~~~   89 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV-GHDAEAVAFDVTSESE   89 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT-TCCEEECCCCTTCHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEcCCCCHHH
Confidence            45789999999999999999999999999999999999999998888888664 3446677888888654

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.28  E-value=1.4e-11  Score=94.18  Aligned_cols=70  Identities=17%  Similarity=0.252  Sum_probs=58.5

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCC-eEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE-QHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~-~~~~~~~dv~~~~~~  145 (147)
                      +++++|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++...++. ...++.+|++|..++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   73 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDI   73 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHH
Confidence            3578999999999999999999999999999999999999888887877654222 466788999986543

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.28  E-value=1.2e-11  Score=96.80  Aligned_cols=70  Identities=16%  Similarity=0.232  Sum_probs=57.4

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC------------hHHHHHHHHHHHHHhCCeEEEEEcccCC
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS------------AERVDSAVQSLREEFGEQHVVQNVMLAK  141 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~dv~~  141 (147)
                      +..++++|+++||||++|||+++++.|+++|++|++++|+            .+.+++..+++... +....++.+|++|
T Consensus        22 m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~  100 (299)
T 3t7c_A           22 MAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL-GRRIIASQVDVRD  100 (299)
T ss_dssp             CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT-TCCEEEEECCTTC
T ss_pred             cccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc-CCceEEEECCCCC
Confidence            3456899999999999999999999999999999999987            66777777776654 4456778888888


Q ss_pred             CCC
Q 032110          142 GMK  144 (147)
Q Consensus       142 ~~~  144 (147)
                      ..+
T Consensus       101 ~~~  103 (299)
T 3t7c_A          101 FDA  103 (299)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.28  E-value=4.9e-12  Score=96.86  Aligned_cols=68  Identities=24%  Similarity=0.370  Sum_probs=57.4

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+. +....++.+|++|..++
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v   70 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF-PGQILTVQMDVRNTDDI   70 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS-TTCEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHH
Confidence            578999999999999999999999999999999999999888887777543 44466778888886543

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.27  E-value=7.4e-12  Score=97.09  Aligned_cols=69  Identities=29%  Similarity=0.415  Sum_probs=55.6

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+. +....++.+|++|..++
T Consensus        20 ~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv~d~~~v   88 (279)
T 3sju_A           20 HMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA-GHDVDGSSCDVTSTDEV   88 (279)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-TCCEEEEECCTTCHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHH
Confidence            3578999999999999999999999999999999999999998888888654 44466788999886543

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.27  E-value=7.2e-12  Score=97.52  Aligned_cols=69  Identities=23%  Similarity=0.280  Sum_probs=56.4

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +....++.+|++|+.+
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv~d~~~   91 (283)
T 3v8b_A           23 MMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA-GGQAIALEADVSDELQ   91 (283)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT-TCCEEEEECCTTCHHH
T ss_pred             hcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHH
Confidence            45678999999999999999999999999999999999999888888777654 3446678888888654

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.27  E-value=2e-11  Score=94.42  Aligned_cols=67  Identities=27%  Similarity=0.420  Sum_probs=57.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.+. +....++.+|++|..+
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv~~~~~   85 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA-GVEADGRTCDVRSVPE   85 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEECCCCCHHH
Confidence            578999999999999999999999999999999999998888877777654 3345677899888654

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.27  E-value=1.3e-11  Score=93.34  Aligned_cols=68  Identities=21%  Similarity=0.291  Sum_probs=58.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+. +....++.+|++|..++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~   69 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK-GFKARGLVLNISDIESI   69 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEecCCCHHHH
Confidence            578999999999999999999999999999999999999988888877665 44467788999886543

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.27  E-value=1.1e-11  Score=94.60  Aligned_cols=65  Identities=22%  Similarity=0.218  Sum_probs=52.0

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      ++++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++..    ....+.+|++|..
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~Dv~d~~   68 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD----NGKGMALNVTNPE   68 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG----GEEEEECCTTCHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc----cceEEEEeCCCHH
Confidence            4568899999999999999999999999999999999998877666555422    2345566666644

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.26  E-value=8.5e-12  Score=96.94  Aligned_cols=70  Identities=21%  Similarity=0.315  Sum_probs=56.9

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ..++.+|+++||||++|||++++++|+++|++|++++| +.+.+++..+++....+....++.+|++|..+
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~   90 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSE   90 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHH
Confidence            45688999999999999999999999999999999999 66677777777765545556777888888654

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.26  E-value=1.3e-11  Score=95.25  Aligned_cols=67  Identities=25%  Similarity=0.321  Sum_probs=55.0

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .++++++|+++||||++|||+++++.|+++|++|++.+|+.+.+++..+++    +....++.+|++|..+
T Consensus        21 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~   87 (266)
T 3grp_A           21 SMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL----GKDVFVFSANLSDRKS   87 (266)
T ss_dssp             CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CSSEEEEECCTTSHHH
T ss_pred             chhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceEEEEeecCCHHH
Confidence            345789999999999999999999999999999999999988777664443    4456677788887554

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.26  E-value=1.4e-11  Score=93.06  Aligned_cols=68  Identities=22%  Similarity=0.393  Sum_probs=56.5

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEccc--CCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVML--AKGM  143 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv--~~~~  143 (147)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+.......++.+|+  ++..
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~   79 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQ   79 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHH
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHH
Confidence            4688999999999999999999999999999999999999998888888776544455555555  5543

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.26  E-value=1.5e-11  Score=94.08  Aligned_cols=67  Identities=24%  Similarity=0.310  Sum_probs=57.9

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++... +....++.+|++|..++
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v   69 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL-GGQCVPVVCDSSQESEV   69 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-SSEEEEEECCTTSHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc-CCceEEEECCCCCHHHH
Confidence            67899999999999999999999999999999999999888888877665 44567788999986543

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.26  E-value=1e-11  Score=94.95  Aligned_cols=68  Identities=22%  Similarity=0.366  Sum_probs=57.4

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH-HHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~-~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +++|+++|||+++|||+++++.|+++|++|++++|+.+. +++..+++.+.++....++.+|++|..++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   70 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAV   70 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHH
Confidence            678999999999999999999999999999999999887 77777777665454566778999886543

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.26  E-value=1.8e-11  Score=94.42  Aligned_cols=70  Identities=21%  Similarity=0.293  Sum_probs=57.0

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC------------hHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS------------AERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      ...+++|+++||||++|||++++++|+++|++|++++|+            .+.+++..+++... +....++.+|++|+
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~   86 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI-GSRIVARQADVRDR   86 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH-TCCEEEEECCTTCH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc-CCeEEEEeCCCCCH
Confidence            456889999999999999999999999999999999987            66677666666554 44567788999886


Q ss_pred             CCc
Q 032110          143 MKW  145 (147)
Q Consensus       143 ~~~  145 (147)
                      .++
T Consensus        87 ~~v   89 (278)
T 3sx2_A           87 ESL   89 (278)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.26  E-value=1.5e-11  Score=97.24  Aligned_cols=70  Identities=20%  Similarity=0.336  Sum_probs=60.3

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCC-eEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE-QHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~-~~~~~~~dv~~~~~~  145 (147)
                      .++.+|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.....+ ...++.+|+++..++
T Consensus         4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v   74 (319)
T 3ioy_A            4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGF   74 (319)
T ss_dssp             CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHH
T ss_pred             cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHH
Confidence            4578999999999999999999999999999999999999999988888776432 467788999986543

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.26  E-value=9.3e-12  Score=96.64  Aligned_cols=68  Identities=26%  Similarity=0.338  Sum_probs=56.3

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHHHHhCCeEEEEEcccCC
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVVQNVMLAK  141 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~-~~~~~~~~~l~~~~~~~~~~~~~dv~~  141 (147)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+. +.+++..+++.+..+....++.+|+++
T Consensus        17 ~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~   85 (288)
T 2x9g_A           17 RGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTN   85 (288)
T ss_dssp             -----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSC
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCC
Confidence            34568899999999999999999999999999999999998 888888888764556567788999998

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.26  E-value=1.7e-11  Score=96.05  Aligned_cols=69  Identities=22%  Similarity=0.295  Sum_probs=59.8

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +....++.+|++|..++
T Consensus        27 ~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv~d~~~v   95 (301)
T 3tjr_A           27 SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ-GFDAHGVVCDVRHLDEM   95 (301)
T ss_dssp             CCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHH
T ss_pred             hccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCceEEEEccCCCHHHH
Confidence            3578999999999999999999999999999999999999999888888765 44467788999986543

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.26  E-value=9.6e-12  Score=96.70  Aligned_cols=67  Identities=25%  Similarity=0.418  Sum_probs=55.9

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +.+++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++    +....++.+|++|..+
T Consensus        10 ~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~   76 (291)
T 3rd5_A           10 DLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM----AGQVEVRELDLQDLSS   76 (291)
T ss_dssp             GCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS----SSEEEEEECCTTCHHH
T ss_pred             hccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----cCCeeEEEcCCCCHHH
Confidence            456789999999999999999999999999999999999998877665544    4456677788877543

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.26  E-value=1.7e-11  Score=93.34  Aligned_cols=67  Identities=28%  Similarity=0.367  Sum_probs=57.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++++|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++... +....++.+|++|..+
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv~~~~~   70 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA-GAKVHVLELDVADRQG   70 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEECCCCCHHH
Confidence            467899999999999999999999999999999999999888888877654 4446677899988654

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.26  E-value=1.1e-11  Score=94.60  Aligned_cols=70  Identities=20%  Similarity=0.266  Sum_probs=60.1

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHH---CCCEEEEEeCChHHHHHHHHHHHHHh-CCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLK---AGDNVIICSRSAERVDSAVQSLREEF-GEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~---~Ga~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~~~dv~~~~~~  145 (147)
                      +++++|+++|||+++|||++++++|++   +|++|++++|+.+.+++..+++.+.+ +....++.+|++|..++
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v   75 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGV   75 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHH
Confidence            457899999999999999999999999   89999999999999988888887654 34567788999986543

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.26  E-value=2e-11  Score=91.96  Aligned_cols=69  Identities=30%  Similarity=0.422  Sum_probs=58.4

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .++++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++.+..+....++.+|++|..+
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   71 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEES   71 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHH
Confidence            357899999999999999999999999999999999999888877777765445556778889887554

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.26  E-value=1.9e-11  Score=94.33  Aligned_cols=68  Identities=31%  Similarity=0.448  Sum_probs=57.9

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +++++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++.+. +....++.+|++|..+
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   84 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK-GLNVEGSVCDLLSRTE   84 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHH
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEECCCCCHHH
Confidence            4578999999999999999999999999999999999998888887777654 3345677889887654

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.26  E-value=1e-11  Score=94.66  Aligned_cols=65  Identities=26%  Similarity=0.373  Sum_probs=52.1

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++    +.....+.+|++|..+
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~   66 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI----GKKARAIAADISDPGS   66 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----CTTEEECCCCTTCHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceEEEEcCCCCHHH
Confidence            3578999999999999999999999999999999999988776665544    3334556677766543

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.26  E-value=1.6e-11  Score=94.86  Aligned_cols=70  Identities=26%  Similarity=0.337  Sum_probs=56.8

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .+.+++|+++||||++|||++++++|+++|++|++++| +.+.+++..+++.+. +....++.+|++|..++
T Consensus        23 ~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~v   93 (269)
T 4dmm_A           23 ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA-GGEAFAVKADVSQESEV   93 (269)
T ss_dssp             -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCTTSHHHH
T ss_pred             ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc-CCcEEEEECCCCCHHHH
Confidence            35688999999999999999999999999999999998 666677776666654 44567788999886543

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.26  E-value=8.8e-12  Score=96.19  Aligned_cols=65  Identities=25%  Similarity=0.364  Sum_probs=50.1

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      ...+++|+++||||++|||++++++|+++|++|++++|+++.+++..+++    +....++.+|++|..
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~   70 (271)
T 3tzq_B            6 TAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV----GRGAVHHVVDLTNEV   70 (271)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH----CTTCEEEECCTTCHH
T ss_pred             CcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----CCCeEEEECCCCCHH
Confidence            34688999999999999999999999999999999999887766554443    223445556665543

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.26  E-value=1.6e-11  Score=93.99  Aligned_cols=65  Identities=28%  Similarity=0.424  Sum_probs=53.3

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +....++.+|++|..+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~   68 (259)
T 4e6p_A            4 KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI----GPAAYAVQMDVTRQDS   68 (259)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CTTEEEEECCTTCHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCCceEEEeeCCCHHH
Confidence            4578999999999999999999999999999999999988777665554    3335667777777543

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.26  E-value=2.2e-11  Score=93.96  Aligned_cols=69  Identities=17%  Similarity=0.278  Sum_probs=55.6

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC------------hHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS------------AERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      +.++++|+++||||++|||++++++|+++|++|++++|+            .+.+++...++... +....++.+|++|.
T Consensus         5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~   83 (287)
T 3pxx_A            5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT-GRKAYTAEVDVRDR   83 (287)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT-TSCEEEEECCTTCH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc-CCceEEEEccCCCH
Confidence            446889999999999999999999999999999999987            66666666666543 44466778888875


Q ss_pred             CC
Q 032110          143 MK  144 (147)
Q Consensus       143 ~~  144 (147)
                      .+
T Consensus        84 ~~   85 (287)
T 3pxx_A           84 AA   85 (287)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.25  E-value=1.8e-11  Score=94.23  Aligned_cols=66  Identities=21%  Similarity=0.208  Sum_probs=56.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      .+++|+++||||++|||+++++.|+++|++|++++| +++.+++..+++.+..+....++.+|++|.
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~   74 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLS   74 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSS
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCc
Confidence            467899999999999999999999999999999999 888888888888765455567789999987

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.25  E-value=1.3e-11  Score=94.57  Aligned_cols=65  Identities=15%  Similarity=0.303  Sum_probs=52.9

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ..+++|+++||||++|||++++++|+++|++|++++|+++.+++..+++    +....++.+|++|..+
T Consensus         4 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~   68 (255)
T 4eso_A            4 GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF----GPRVHALRSDIADLNE   68 (255)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----GGGEEEEECCTTCHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCcceEEEccCCCHHH
Confidence            3578999999999999999999999999999999999988776665544    3345666777776543

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.25  E-value=1.5e-11  Score=95.38  Aligned_cols=70  Identities=24%  Similarity=0.226  Sum_probs=60.7

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+. +....++.+|++|..++
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~   97 (275)
T 4imr_A           28 IFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS-GGTAQELAGDLSEAGAG   97 (275)
T ss_dssp             HHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT-TCCEEEEECCTTSTTHH
T ss_pred             cCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCeEEEEEecCCCHHHH
Confidence            34689999999999999999999999999999999999999988888888765 44467889999987643

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.25  E-value=1.7e-11  Score=94.98  Aligned_cols=70  Identities=14%  Similarity=0.206  Sum_probs=55.8

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC----------------hHHHHHHHHHHHHHhCCeEEEEEcc
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS----------------AERVDSAVQSLREEFGEQHVVQNVM  138 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~----------------~~~~~~~~~~l~~~~~~~~~~~~~d  138 (147)
                      ...+++|+++||||++|||+++++.|+++|++|++++|+                .+.+++..+++... +....++.+|
T Consensus         6 ~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D   84 (286)
T 3uve_A            6 TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH-NRRIVTAEVD   84 (286)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT-TCCEEEEECC
T ss_pred             CcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc-CCceEEEEcC
Confidence            346889999999999999999999999999999999887                66666666665543 4446677888


Q ss_pred             cCCCCCc
Q 032110          139 LAKGMKW  145 (147)
Q Consensus       139 v~~~~~~  145 (147)
                      ++|..++
T Consensus        85 v~~~~~v   91 (286)
T 3uve_A           85 VRDYDAL   91 (286)
T ss_dssp             TTCHHHH
T ss_pred             CCCHHHH
Confidence            8876543

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.25  E-value=2.4e-11  Score=96.54  Aligned_cols=67  Identities=19%  Similarity=0.217  Sum_probs=58.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEe-CChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~-r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      ++++|+++||||++|||+++++.|+++|++|++++ |+.+.+++..+++....+....++.+|+++..
T Consensus        43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~  110 (328)
T 2qhx_A           43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVA  110 (328)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCch
Confidence            47899999999999999999999999999999999 99999988888887555666778899999876

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.24  E-value=1.8e-11  Score=94.71  Aligned_cols=69  Identities=20%  Similarity=0.373  Sum_probs=56.0

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-------------ChHHHHHHHHHHHHHhCCeEEEEEcccCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-------------SAERVDSAVQSLREEFGEQHVVQNVMLAK  141 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~dv~~  141 (147)
                      +.++++|+++||||++|||++++++|+++|++|++++|             +.+.+++..+++... +....++.+|++|
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~   88 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ-GRKALTRVLDVRD   88 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT-TCCEEEEECCTTC
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc-CCeEEEEEcCCCC
Confidence            45689999999999999999999999999999999998             667777776666544 4446677888887


Q ss_pred             CCC
Q 032110          142 GMK  144 (147)
Q Consensus       142 ~~~  144 (147)
                      +.+
T Consensus        89 ~~~   91 (280)
T 3pgx_A           89 DAA   91 (280)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.24  E-value=2e-11  Score=93.23  Aligned_cols=68  Identities=32%  Similarity=0.441  Sum_probs=56.7

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ..+++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++... +.....+.+|++|..+
T Consensus        10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~   77 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE-GLSVTGTVCHVGKAED   77 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEccCCCHHH
Confidence            4578999999999999999999999999999999999998888777777654 3335567788887543

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.24  E-value=1.4e-11  Score=93.35  Aligned_cols=63  Identities=21%  Similarity=0.291  Sum_probs=51.4

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      |++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.    ....++.+|++|..+
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~   63 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG----NAVIGIVADLAHHED   63 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----GGEEEEECCTTSHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----CCceEEECCCCCHHH
Confidence            457899999999999999999999999999999999988877766652    235677788887544

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.24  E-value=1.3e-11  Score=95.88  Aligned_cols=66  Identities=23%  Similarity=0.367  Sum_probs=52.0

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +....++.+|++|..+
T Consensus        24 ~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~   89 (277)
T 3gvc_A           24 HPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI----GCGAAACRVDVSDEQQ   89 (277)
T ss_dssp             ---CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH----CSSCEEEECCTTCHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CCcceEEEecCCCHHH
Confidence            34689999999999999999999999999999999999988777665554    3345566777776543

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.24  E-value=2.3e-11  Score=93.98  Aligned_cols=69  Identities=23%  Similarity=0.416  Sum_probs=54.8

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC------------hHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS------------AERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      +.++++|+++||||++|||++++++|+++|++|++++|+            .+.+++..+++... +....++.+|++|.
T Consensus         5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~   83 (281)
T 3s55_A            5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT-GRRCISAKVDVKDR   83 (281)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT-TCCEEEEECCTTCH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc-CCeEEEEeCCCCCH
Confidence            446889999999999999999999999999999999997            55566665555543 44466778888875


Q ss_pred             CC
Q 032110          143 MK  144 (147)
Q Consensus       143 ~~  144 (147)
                      .+
T Consensus        84 ~~   85 (281)
T 3s55_A           84 AA   85 (281)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.24  E-value=2.2e-11  Score=94.53  Aligned_cols=68  Identities=21%  Similarity=0.275  Sum_probs=53.9

Q ss_pred             CCCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        73 ~~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+.+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +.....+.+|++|..+
T Consensus        20 ~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~   87 (277)
T 4dqx_A           20 FQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI----GSKAFGVRVDVSSAKD   87 (277)
T ss_dssp             --CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH----CTTEEEEECCTTCHHH
T ss_pred             cccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceEEEEecCCCHHH
Confidence            3446789999999999999999999999999999999999988776655543    4445666777777543

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.24  E-value=2.4e-11  Score=93.79  Aligned_cols=69  Identities=20%  Similarity=0.225  Sum_probs=55.5

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-------------ChHHHHHHHHHHHHHhCCeEEEEEcccCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-------------SAERVDSAVQSLREEFGEQHVVQNVMLAK  141 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~dv~~  141 (147)
                      ..++++|+++||||++|||++++++|+++|++|++++|             +.+.+++..+++... +....++.+|++|
T Consensus         6 ~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~   84 (277)
T 3tsc_A            6 AGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA-NRRIVAAVVDTRD   84 (277)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT-TCCEEEEECCTTC
T ss_pred             ccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc-CCeEEEEECCCCC
Confidence            34688999999999999999999999999999999998             566777766666554 4446677888887


Q ss_pred             CCC
Q 032110          142 GMK  144 (147)
Q Consensus       142 ~~~  144 (147)
                      ..+
T Consensus        85 ~~~   87 (277)
T 3tsc_A           85 FDR   87 (277)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            554

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.24  E-value=2.3e-11  Score=92.79  Aligned_cols=65  Identities=26%  Similarity=0.410  Sum_probs=53.5

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +++++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++    +....++.+|++|..+
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~   69 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI----GDAALAVAADISKEAD   69 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CTTEEEEECCTTSHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----CCceEEEEecCCCHHH
Confidence            5688999999999999999999999999999999999988877665544    3445667777776543

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.24  E-value=7.4e-12  Score=97.38  Aligned_cols=68  Identities=19%  Similarity=0.295  Sum_probs=55.9

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +....++.+|++|..+
T Consensus         4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~   71 (280)
T 3tox_A            4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG-GGEAAALAGDVGDEAL   71 (280)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT-TCCEEECCCCTTCHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEECCCCCHHH
Confidence            4578999999999999999999999999999999999998888777776543 3345566777777543

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.23  E-value=2.5e-11  Score=94.07  Aligned_cols=68  Identities=26%  Similarity=0.315  Sum_probs=58.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.+..+....++.+|++|..+
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~   92 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTF   92 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHH
Confidence            47899999999999999999999999999999999999998888777766544456778899988543

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.23  E-value=4.7e-11  Score=92.67  Aligned_cols=69  Identities=22%  Similarity=0.302  Sum_probs=58.1

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ..+.+|+++||||++|||+++++.|+++|++|+++++ +.+.+++..+++... +....++.+|++|..++
T Consensus        25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v   94 (280)
T 4da9_A           25 TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL-GARVIFLRADLADLSSH   94 (280)
T ss_dssp             SCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT-TCCEEEEECCTTSGGGH
T ss_pred             hccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHH
Confidence            3578999999999999999999999999999999995 777778777777654 44567789999987654

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.23  E-value=2.7e-11  Score=93.25  Aligned_cols=69  Identities=35%  Similarity=0.361  Sum_probs=54.3

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~-~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+++++|+++||||++|||++++++|+++|++|++++|+. +..++..+++.+ .+....++.+|+++..+
T Consensus        24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~   93 (271)
T 4iin_A           24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEE-KGYKAAVIKFDAASESD   93 (271)
T ss_dssp             CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-cCCceEEEECCCCCHHH
Confidence            4568899999999999999999999999999999999954 444545455544 35556778889888654

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.23  E-value=2.2e-11  Score=96.12  Aligned_cols=70  Identities=19%  Similarity=0.303  Sum_probs=55.1

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC------------hHHHHHHHHHHHHHhCCeEEEEEcccCC
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS------------AERVDSAVQSLREEFGEQHVVQNVMLAK  141 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~dv~~  141 (147)
                      .+.++++|+++||||++|||+++++.|+++|++|++++|+            .+.+++..+++.+. +....++.+|++|
T Consensus        40 ~m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d  118 (317)
T 3oec_A           40 RMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ-GRRIIARQADVRD  118 (317)
T ss_dssp             --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT-TCCEEEEECCTTC
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc-CCeEEEEECCCCC
Confidence            3456899999999999999999999999999999999886            56666666666543 4446677888887


Q ss_pred             CCC
Q 032110          142 GMK  144 (147)
Q Consensus       142 ~~~  144 (147)
                      ..+
T Consensus       119 ~~~  121 (317)
T 3oec_A          119 LAS  121 (317)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            554

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.23  E-value=8.7e-12  Score=95.25  Aligned_cols=63  Identities=17%  Similarity=0.275  Sum_probs=42.8

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      +.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +....++.+|++|.
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~   65 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL----GAAVRFRNADVTNE   65 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC----------------CEEEECCTTCH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CCceEEEEccCCCH
Confidence            4578999999999999999999999999999999999876655544433    22234455555553

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.23  E-value=2.3e-11  Score=93.23  Aligned_cols=67  Identities=21%  Similarity=0.246  Sum_probs=56.8

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++++|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++... +....++.+|++|..+
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   70 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK-GVEARSYVCDVTSEEA   70 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-TSCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEecCCCHHH
Confidence            478899999999999999999999999999999999998888877777554 3345677889888654

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.23  E-value=2.2e-11  Score=95.34  Aligned_cols=70  Identities=24%  Similarity=0.290  Sum_probs=57.7

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCC--eEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE--QHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~--~~~~~~~dv~~~~~  144 (147)
                      ++++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.+..+.  ...++.+|++|..+
T Consensus        21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~   92 (297)
T 1xhl_A           21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASG   92 (297)
T ss_dssp             --CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHH
Confidence            34578999999999999999999999999999999999999888887777654321  45678899988654

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.23  E-value=2e-11  Score=94.43  Aligned_cols=68  Identities=29%  Similarity=0.301  Sum_probs=57.0

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCC--eEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE--QHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~--~~~~~~~dv~~~~~  144 (147)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+..+.  ...++.+|++|..+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   72 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDG   72 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHH
Confidence            478899999999999999999999999999999999998888877777654221  45678899988654

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.23  E-value=3.6e-11  Score=93.10  Aligned_cols=69  Identities=20%  Similarity=0.320  Sum_probs=53.7

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH-HHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~-~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+.+++|+++||||++|||++++++|+++|++|++++|+.+. .++..+++.+. +....++.+|+++..+
T Consensus        24 ~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   93 (283)
T 1g0o_A           24 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN-GSDAACVKANVGVVED   93 (283)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh-CCCeEEEEcCCCCHHH
Confidence            345789999999999999999999999999999999998754 44455555443 4445667788877543

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.23  E-value=1.3e-11  Score=93.80  Aligned_cols=69  Identities=23%  Similarity=0.353  Sum_probs=57.3

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +.+++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.+..+....++.+|++|..+
T Consensus        10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~   78 (265)
T 1h5q_A           10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDI   78 (265)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHH
Confidence            457899999999999999999999999999999999987766666667766556556777888887544

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.22  E-value=2.6e-11  Score=92.00  Aligned_cols=66  Identities=24%  Similarity=0.447  Sum_probs=55.7

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +++|+++|||+++|||+++++.|+++|++|++++| +++.+++..+++... +....++.+|++|..+
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   68 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL-GSDAIAVRADVANAED   68 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHH
Confidence            67899999999999999999999999999999999 888888777777654 3345677889988654

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.22  E-value=2.8e-11  Score=93.46  Aligned_cols=68  Identities=28%  Similarity=0.409  Sum_probs=53.8

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH-------HHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-------VDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +++++|+++|||+++|||++++++|+++|++|++++|+.+.       +++..+++... +....++.+|++|..+
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~   76 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA-GGQGLALKCDIREEDQ   76 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH-TSEEEEEECCTTCHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc-CCeEEEEeCCCCCHHH
Confidence            46889999999999999999999999999999999998653       45555555443 4456677788877543

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.22  E-value=2.5e-11  Score=94.73  Aligned_cols=69  Identities=30%  Similarity=0.504  Sum_probs=61.0

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCC---EEEEEeCChHHHHHHHHHHHHHh-CCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD---NVIICSRSAERVDSAVQSLREEF-GEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga---~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~~~dv~~~~~~  145 (147)
                      .+++|+++||||++|||++++++|+++|+   +|++++|+.+.+++..+++.+.+ +....++.+|++|..++
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v  102 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKI  102 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGH
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHH
Confidence            47899999999999999999999999998   99999999999999999888765 34567789999997764

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.21  E-value=2.4e-11  Score=94.26  Aligned_cols=63  Identities=29%  Similarity=0.325  Sum_probs=51.1

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+++..++    .+....++.+|+++..
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dv~~~~   64 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA----HGGNAVGVVGDVRSLQ   64 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TBTTEEEEECCTTCHH
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH----cCCcEEEEEcCCCCHH
Confidence            57899999999999999999999999999999999998776654433    2444566677777654

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.21  E-value=2.4e-11  Score=93.43  Aligned_cols=71  Identities=17%  Similarity=0.245  Sum_probs=56.3

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC---hHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS---AERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~---~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ..+++++|+++||||++|||++++++|+++|++|++++|.   .+.+++..+++... +....++.+|++|..++
T Consensus         5 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v   78 (262)
T 3ksu_A            5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ-GAKVALYQSDLSNEEEV   78 (262)
T ss_dssp             CCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT-TCEEEEEECCCCSHHHH
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHH
Confidence            4467899999999999999999999999999999998764   45566666666544 44567778888886543

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.21  E-value=2.7e-11  Score=94.21  Aligned_cols=68  Identities=29%  Similarity=0.424  Sum_probs=55.2

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH-------HHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-------RVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~-------~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+       .+++..+++... +....++.+|++|..+
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~   79 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA-GGQALPIVGDIRDGDA   79 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH-TSEEEEEECCTTSHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc-CCcEEEEECCCCCHHH
Confidence            4688999999999999999999999999999999999876       456666666554 4456777888887554

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.21  E-value=1.7e-11  Score=95.05  Aligned_cols=67  Identities=30%  Similarity=0.459  Sum_probs=54.0

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      .+++++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++.+ .+ ...++.+|++|..
T Consensus        24 ~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-~~-~~~~~~~Dv~d~~   90 (276)
T 2b4q_A           24 YFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSA-YG-DCQAIPADLSSEA   90 (276)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTT-SS-CEEECCCCTTSHH
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cC-ceEEEEeeCCCHH
Confidence            3457899999999999999999999999999999999998887776666643 22 3455677777654

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.21  E-value=4.5e-11  Score=92.06  Aligned_cols=71  Identities=20%  Similarity=0.276  Sum_probs=56.8

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~-~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ...++++|+++||||++|||++++++|+++|++|++++++ .+.+++..+++.+. +....++.+|++|..++
T Consensus        12 ~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v   83 (270)
T 3is3_A           12 IPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL-GSDAIAIKADIRQVPEI   83 (270)
T ss_dssp             CTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCTTSHHHH
T ss_pred             CCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHH
Confidence            3456899999999999999999999999999999998764 55666666766654 44567788999986543

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.21  E-value=2.2e-11  Score=93.35  Aligned_cols=68  Identities=25%  Similarity=0.362  Sum_probs=55.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHh-CCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF-GEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~~~dv~~~~~  144 (147)
                      ++++|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++.+.. +....++.+|++|..+
T Consensus         4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~   72 (267)
T 2gdz_A            4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQ   72 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHH
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHH
Confidence            4688999999999999999999999999999999999888777666665432 2235667888887654

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.21  E-value=2.7e-11  Score=92.88  Aligned_cols=68  Identities=22%  Similarity=0.384  Sum_probs=53.7

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~-~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +++++|+++||||++|||++++++|+++|++|+++ +++.+..++..+++.+. +....++.+|++|..+
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~   72 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL-GRSALAIKADLTNAAE   72 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT-TSCCEEEECCTTCHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCceEEEEcCCCCHHH
Confidence            46889999999999999999999999999999998 66666666666666543 3345667788877543

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.20  E-value=2.1e-11  Score=94.04  Aligned_cols=60  Identities=25%  Similarity=0.344  Sum_probs=45.9

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +|+++||||++|||+++|+.|+++|++|++++|+++.+++..+    +.+ ....+.+|++|+.+
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~----~~~-~~~~~~~Dv~~~~~   61 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK----ERP-NLFYFHGDVADPLT   61 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT----TCT-TEEEEECCTTSHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----hcC-CEEEEEecCCCHHH
Confidence            4899999999999999999999999999999999876554332    222 24455666666543

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.20  E-value=5.4e-11  Score=91.60  Aligned_cols=69  Identities=20%  Similarity=0.216  Sum_probs=58.3

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+++.+|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++.+. +....++.+|++|..+
T Consensus        26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~   94 (272)
T 1yb1_A           26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL-GAKVHTFVVDCSNRED   94 (272)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc-CCeEEEEEeeCCCHHH
Confidence            34578999999999999999999999999999999999998888877777654 3446677899988653

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.20  E-value=5.9e-11  Score=91.78  Aligned_cols=71  Identities=24%  Similarity=0.326  Sum_probs=56.4

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~-~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ..+++++|+++||||++|||++++++|+++|++|++++++ .+.+++..+++.+. +....++.+|++|..++
T Consensus        25 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dv~d~~~v   96 (271)
T 3v2g_A           25 TSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA-GGRAVAIRADNRDAEAI   96 (271)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHH
Confidence            3456899999999999999999999999999999998665 45666666666554 44567788898886543

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.20  E-value=6.2e-11  Score=92.18  Aligned_cols=69  Identities=30%  Similarity=0.455  Sum_probs=58.1

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHH----hCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE----FGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~----~~~~~~~~~~dv~~~~~  144 (147)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...    .+....++.+|+++..+
T Consensus        14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~   86 (303)
T 1yxm_A           14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEE   86 (303)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHH
Confidence            4578999999999999999999999999999999999998888887777652    23446677889887654

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.20  E-value=5e-11  Score=93.18  Aligned_cols=72  Identities=14%  Similarity=0.205  Sum_probs=55.4

Q ss_pred             CCCCCCCCCCEEEEeCCcC--hHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           72 VKREPMLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        72 ~~~~~~~~~k~~lVTG~s~--GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +...+.+++|+++||||++  |||++++++|+++|++|++++|+++..+.. +++.+..+. ..++.+|++|..++
T Consensus        22 m~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~-~~~~~~~~~-~~~~~~Dv~d~~~v   95 (296)
T 3k31_A           22 MRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRV-DPLAESLGV-KLTVPCDVSDAESV   95 (296)
T ss_dssp             CCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHHHTC-CEEEECCTTCHHHH
T ss_pred             ccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHH-HHHHHhcCC-eEEEEcCCCCHHHH
Confidence            3445678999999999986  999999999999999999999997544433 444444454 36778888886543

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.19  E-value=3e-11  Score=92.62  Aligned_cols=67  Identities=24%  Similarity=0.334  Sum_probs=55.4

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~-~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +++|+++||||++|||++++++|+++|++|++. +|+.+.+++..+++.+. +....++.+|++|..++
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v   69 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL-GVKVLVVKANVGQPAKI   69 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-TCCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHH
Confidence            468999999999999999999999999999996 89988888887777653 44467788898886543

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.19  E-value=3e-11  Score=93.59  Aligned_cols=64  Identities=17%  Similarity=0.280  Sum_probs=49.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+.+|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +....++.+|++|..+
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~   88 (272)
T 4dyv_A           25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI----GDDALCVPTDVTDPDS   88 (272)
T ss_dssp             ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----TSCCEEEECCTTSHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----CCCeEEEEecCCCHHH
Confidence            468899999999999999999999999999999999988777665554    2334566677766443

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.19  E-value=5.4e-11  Score=90.30  Aligned_cols=68  Identities=25%  Similarity=0.304  Sum_probs=56.9

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +....++.+|++|..+
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~   76 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME-GHDVSSVVMDVTNTES   76 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEecCCCHHH
Confidence            4578999999999999999999999999999999999998887777777654 3345677888887554

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.19  E-value=5.9e-11  Score=89.77  Aligned_cols=66  Identities=24%  Similarity=0.328  Sum_probs=53.6

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeE-EEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH-VVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~-~~~~~dv~~~~~  144 (147)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +... .++.+|++|..+
T Consensus         6 ~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~   72 (254)
T 2wsb_A            6 VFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL----GAAVAARIVADVTDAEA   72 (254)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----GGGEEEEEECCTTCHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----cccceeEEEEecCCHHH
Confidence            34678999999999999999999999999999999999988777665555    2223 567788877543

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.18  E-value=1.7e-11  Score=94.32  Aligned_cols=44  Identities=30%  Similarity=0.439  Sum_probs=35.9

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~  117 (147)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+.+.+
T Consensus        21 ~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~   64 (260)
T 3gem_A           21 GHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHAS   64 (260)
T ss_dssp             ------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHH
T ss_pred             cCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHH
Confidence            45678999999999999999999999999999999999987654

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.18  E-value=5.3e-11  Score=92.15  Aligned_cols=69  Identities=23%  Similarity=0.323  Sum_probs=55.6

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++.+. +....++.+|++|..+
T Consensus        25 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~   93 (273)
T 3uf0_A           25 GPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG-GGSAEAVVADLADLEG   93 (273)
T ss_dssp             CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTT-TCEEEEEECCTTCHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhc-CCcEEEEEecCCCHHH
Confidence            4467899999999999999999999999999999999976 4556666666543 4456677888888654

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.18  E-value=3.8e-11  Score=94.82  Aligned_cols=69  Identities=23%  Similarity=0.307  Sum_probs=56.8

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC----------hHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS----------AERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~----------~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +..+++|+++||||++|||+++++.|+++|++|++++|+          .+.+++..+++... +....++.+|++|..+
T Consensus        22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~  100 (322)
T 3qlj_A           22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA-GGEAVADGSNVADWDQ  100 (322)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT-TCEEEEECCCTTSHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc-CCcEEEEECCCCCHHH
Confidence            446889999999999999999999999999999999987          66777777777654 4456677888887544

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.18  E-value=6.5e-11  Score=91.26  Aligned_cols=69  Identities=19%  Similarity=0.275  Sum_probs=57.9

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhC-CeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~-~~~~~~~~dv~~~~~  144 (147)
                      ..+++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++..... ....++.+|++|..+
T Consensus        28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~   97 (279)
T 1xg5_A           28 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEED   97 (279)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHH
Confidence            347899999999999999999999999999999999999888888777765432 345677899988654

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.18  E-value=7.4e-11  Score=90.02  Aligned_cols=68  Identities=26%  Similarity=0.340  Sum_probs=57.4

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      .+.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+. +....++.+|+++..
T Consensus         9 ~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~   76 (266)
T 1xq1_A            9 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK-GFQVTGSVCDASLRP   76 (266)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTSHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeeEEEECCCCCHH
Confidence            34678999999999999999999999999999999999998888877777654 334567788888754

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.17  E-value=4.7e-11  Score=91.06  Aligned_cols=64  Identities=20%  Similarity=0.293  Sum_probs=51.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++    +....++.+|++|..+
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~   66 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----GERSMFVRHDVSSEAD   66 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----CTTEEEECCCTTCHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CCceEEEEccCCCHHH
Confidence            468899999999999999999999999999999999988776655544    3334566777776543

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.17  E-value=2.9e-11  Score=92.47  Aligned_cols=64  Identities=28%  Similarity=0.339  Sum_probs=48.4

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      .+++++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++.    ....++.+|++|.
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~d~   70 (263)
T 3ak4_A            7 IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE----NGGFAVEVDVTKR   70 (263)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT----TCCEEEECCTTCH
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCCeEEEEeCCCH
Confidence            456789999999999999999999999999999999998876654433321    1233455555553

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.17  E-value=7.3e-11  Score=90.78  Aligned_cols=64  Identities=30%  Similarity=0.396  Sum_probs=51.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH-----------------HHHHHHHHHhCCeEEEEEccc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD-----------------SAVQSLREEFGEQHVVQNVML  139 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~-----------------~~~~~l~~~~~~~~~~~~~dv  139 (147)
                      .++||+++|||+++|||+++++.|+++|++|++++|+++.++                 +.++++.+++++.++++++..
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAG   87 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAG   87 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            368999999999999999999999999999999999876432                 334555566777777777665


Q ss_pred             C
Q 032110          140 A  140 (147)
Q Consensus       140 ~  140 (147)
                      .
T Consensus        88 i   88 (242)
T 4b79_A           88 I   88 (242)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.17  E-value=3.3e-11  Score=92.74  Aligned_cols=63  Identities=22%  Similarity=0.354  Sum_probs=49.7

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      ++++|+++|||+++|||++++++|+++|++|++++|+++.+++..+++    +....++.+|++|..
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~   65 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL----EAEAIAVVADVSDPK   65 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC----CSSEEEEECCTTSHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----cCceEEEEcCCCCHH
Confidence            478899999999999999999999999999999999987766554433    223455666766644

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.17  E-value=2.7e-11  Score=93.85  Aligned_cols=66  Identities=23%  Similarity=0.381  Sum_probs=53.2

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ..|+ |+++||||++|||++++++|+++|++|++++|+.+.+++..+++...  ....++.+|++|..+
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~   83 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK--TRVLPLTLDVRDRAA   83 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT--SCEEEEECCTTCHHH
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC--CcEEEEEcCCCCHHH
Confidence            4456 89999999999999999999999999999999998888777766432  235677889988654

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.17  E-value=5.1e-11  Score=90.06  Aligned_cols=68  Identities=22%  Similarity=0.296  Sum_probs=57.0

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.... ....++.+|++|..+
T Consensus         7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~   74 (255)
T 1fmc_A            7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG-GQAFACRCDITSEQE   74 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHH
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhC-CceEEEEcCCCCHHH
Confidence            45789999999999999999999999999999999999988887777776543 345677889887543

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.17  E-value=3.7e-11  Score=92.48  Aligned_cols=68  Identities=26%  Similarity=0.309  Sum_probs=55.2

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHH--hCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE--FGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~--~~~~~~~~~~dv~~~~~  144 (147)
                      ++++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++...  .+....++.+|++|..+
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   72 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAG   72 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHH
Confidence            467899999999999999999999999999999999998888777766321  12235677888887553

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.17  E-value=3.8e-11  Score=91.71  Aligned_cols=63  Identities=24%  Similarity=0.361  Sum_probs=49.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      ++++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++    +....++.+|+++..
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~   64 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----GDAARYQHLDVTIEE   64 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----GGGEEEEECCTTCHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceeEEEecCCCHH
Confidence            367899999999999999999999999999999999987766554443    222445566666643

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.17  E-value=9e-11  Score=91.70  Aligned_cols=69  Identities=23%  Similarity=0.337  Sum_probs=53.9

Q ss_pred             CCCCCCCEEEEeCCc--ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           75 EPMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s--~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +.++++|+++|||++  +|||+++++.|+++|++|++++|+++ ..+..+++.+..++ ..++.+|++|..++
T Consensus        26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v   96 (293)
T 3grk_A           26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDA-LKKRVEPLAEELGA-FVAGHCDVADAASI   96 (293)
T ss_dssp             -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHH-HHHHHHHHHHHHTC-EEEEECCTTCHHHH
T ss_pred             cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCC-ceEEECCCCCHHHH
Confidence            456899999999999  55999999999999999999999954 34445556555554 56778898886543

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.17  E-value=3.8e-11  Score=92.94  Aligned_cols=68  Identities=24%  Similarity=0.323  Sum_probs=51.9

Q ss_pred             CCCCCCCCEEEEeCCc--ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           74 REPMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s--~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+.++++|+++||||+  +|||+++++.|+++|++|++++|+.  .++..+++.+.+++ ..++.+|+++..+
T Consensus        20 ~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~-~~~~~~Dl~~~~~   89 (280)
T 3nrc_A           20 HMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNP-AAVLPCDVISDQE   89 (280)
T ss_dssp             --CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCC-SEEEECCTTCHHH
T ss_pred             cccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCC-ceEEEeecCCHHH
Confidence            4456889999999988  7899999999999999999999987  34445555555554 4566777777543

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.16  E-value=9e-11  Score=89.56  Aligned_cols=69  Identities=26%  Similarity=0.356  Sum_probs=56.7

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+.+++|+++||||++|||++++++|+++|++|++++| +.+.+++..+++.+. +....++.+|++|..+
T Consensus        16 ~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~   85 (274)
T 1ja9_A           16 SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL-GAQGVAIQADISKPSE   85 (274)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCTTSHHH
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc-CCcEEEEEecCCCHHH
Confidence            34578999999999999999999999999999999999 777777777777653 4445677889887654

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.16  E-value=6.2e-11  Score=95.10  Aligned_cols=70  Identities=26%  Similarity=0.404  Sum_probs=56.2

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH-------HHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-------VDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ....++||+++|||+++|||++++++|+++|++|++++|+.+.       +++..+++.+. +....++.+|++|+.+
T Consensus        39 ~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~-g~~~~~~~~Dv~d~~~  115 (346)
T 3kvo_A           39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV-GGKALPCIVDVRDEQQ  115 (346)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT-TCEEEEEECCTTCHHH
T ss_pred             cCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc-CCeEEEEEccCCCHHH
Confidence            4457899999999999999999999999999999999998764       45555665543 4556677888887654

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.16  E-value=1.7e-11  Score=93.79  Aligned_cols=70  Identities=21%  Similarity=0.286  Sum_probs=57.8

Q ss_pred             CCCCCCCEEEEeCCc--ChHHHHHHHHHHHCCCEEEEEeCChHHH-HHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERV-DSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s--~GIG~~~a~~La~~Ga~V~i~~r~~~~~-~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+++++|+++||||+  +|||++++++|+++|++|++++|+.+.. ++..+++.+..+....++.+|++|..+
T Consensus        15 ~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~   87 (267)
T 3gdg_A           15 QLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYES   87 (267)
T ss_dssp             HHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHH
T ss_pred             ccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHH
Confidence            456899999999999  9999999999999999999998876554 666777776666667777888887554

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.16  E-value=6e-11  Score=90.97  Aligned_cols=63  Identities=14%  Similarity=0.246  Sum_probs=50.0

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++..    ...++.+|++|..
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~D~~~~~   66 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD----AARYVHLDVTQPA   66 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG----GEEEEECCTTCHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc----CceEEEecCCCHH
Confidence            47889999999999999999999999999999999998777655544421    2445667776644

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.16  E-value=6e-11  Score=91.25  Aligned_cols=70  Identities=23%  Similarity=0.249  Sum_probs=56.4

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +.+++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++... +....++.+|++|..+
T Consensus        28 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~   97 (279)
T 3ctm_A           28 DLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY-GVHSKAYKCNISDPKS   97 (279)
T ss_dssp             GGGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH-CSCEEEEECCTTCHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcceEEEeecCCHHH
Confidence            335688999999999999999999999999999999999987776665555443 4446677888887543

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.16  E-value=6.3e-11  Score=91.43  Aligned_cols=69  Identities=19%  Similarity=0.307  Sum_probs=51.2

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~-~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+++++|+++||||++|||++++++|+++|++|++. .++.+.+++..+++... +....++.+|++|..+
T Consensus        22 ~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~   91 (267)
T 3u5t_A           22 SMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA-GGKALTAQADVSDPAA   91 (267)
T ss_dssp             -----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT-TCCEEEEECCTTCHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHH
Confidence            345789999999999999999999999999999987 45666666666666544 4446677888887554

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.16  E-value=9.1e-11  Score=88.81  Aligned_cols=66  Identities=30%  Similarity=0.379  Sum_probs=53.5

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      +...+++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++    .....++.+|+++..
T Consensus         8 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~   73 (249)
T 3f9i_A            8 HMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL----KDNYTIEVCNLANKE   73 (249)
T ss_dssp             -CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CSSEEEEECCTTSHH
T ss_pred             ccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----ccCccEEEcCCCCHH
Confidence            455788999999999999999999999999999999999998877765554    334556677777643

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.15  E-value=9.5e-11  Score=89.65  Aligned_cols=69  Identities=14%  Similarity=0.283  Sum_probs=54.4

Q ss_pred             CCCCCCEEEEeCCc--ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCC-eEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE-QHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s--~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~-~~~~~~~dv~~~~~~  145 (147)
                      +++++|+++||||+  +|||+++++.|+++|++|++++|+....+ ..+++.+..+. ...++.+|++|..++
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v   74 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEK-SVHELAGTLDRNDSIILPCDVTNDAEI   74 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHHHTSSSCCCEEEECCCSSSHHH
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHH-HHHHHHHhcCCCCceEEeCCCCCHHHH
Confidence            46889999999999  66999999999999999999999865443 34455554444 567788999987654

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.15  E-value=7.1e-11  Score=89.85  Aligned_cols=64  Identities=17%  Similarity=0.297  Sum_probs=51.1

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      +++++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++    +....++.+|++|..
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~   71 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL----GNNCVFAPADVTSEK   71 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH----CTTEEEEECCTTCHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh----CCceEEEEcCCCCHH
Confidence            4578999999999999999999999999999999999887666554444    333456667777644

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.15  E-value=5.8e-11  Score=89.76  Aligned_cols=67  Identities=34%  Similarity=0.480  Sum_probs=55.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~-~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++++|+++||||++|||++++++|+++|++|++++|+ .+.+++..+++... +....++.+|++|..+
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   71 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD-GGDAAFFAADLATSEA   71 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT-TCEEEEEECCTTSHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc-CCceEEEECCCCCHHH
Confidence            4678999999999999999999999999999999999 77777777766554 4445677888887543

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.15  E-value=6e-11  Score=90.23  Aligned_cols=68  Identities=21%  Similarity=0.272  Sum_probs=52.9

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhC------CeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG------EQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~------~~~~~~~~dv~~~~~  144 (147)
                      ++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.+...      ....++.+|++|..+
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   77 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARA   77 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHH
Confidence            47889999999999999999999999999999999999887776665543320      234667888887543

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.15  E-value=1.1e-10  Score=88.69  Aligned_cols=66  Identities=23%  Similarity=0.396  Sum_probs=53.6

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +.+|+++||||++|||++++++|+++|++|+++++ +.+.+++..+++... +....++.+|++|..+
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~   68 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK-GVDSFAIQANVADADE   68 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TSCEEEEECCTTCHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHH
Confidence            56899999999999999999999999999999887 456677777776654 4445677888888654

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.15  E-value=8.6e-11  Score=90.37  Aligned_cols=68  Identities=25%  Similarity=0.316  Sum_probs=54.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~-~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +.++|+++||||++|||++++++|+++|++|++. .|+.+.+++..+++.+. +....++.+|++|..++
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v   91 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES-GGEAVAIPGDVGNAADI   91 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCEEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc-CCcEEEEEcCCCCHHHH
Confidence            4568899999999999999999999999999886 77777777777766554 45567788888886543

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.15  E-value=1e-10  Score=89.16  Aligned_cols=64  Identities=23%  Similarity=0.345  Sum_probs=54.5

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++... +....++.+|++|..+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   65 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA-GGHAVAVKVDVSDRDQ   65 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTSHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEecCCCHHH
Confidence            589999999999999999999999999999999998888877777654 3345677899988654

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.15  E-value=9.6e-11  Score=90.76  Aligned_cols=69  Identities=26%  Similarity=0.254  Sum_probs=57.4

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+.+++|+++||||++|||+++++.|+++|++|++.+|+.+.+++..+++.+. +....++.+|++|..+
T Consensus        39 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~d~~~  107 (285)
T 2c07_A           39 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF-GYESSGYAGDVSKKEE  107 (285)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT-TCCEEEEECCTTCHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc-CCceeEEECCCCCHHH
Confidence            35678999999999999999999999999999999999988888777777543 3345677889887554

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.15  E-value=6.7e-11  Score=89.88  Aligned_cols=45  Identities=33%  Similarity=0.498  Sum_probs=40.0

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      ++++|+++|||+++|||++++++|+++|++|++++|+.+.+++..
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~   46 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAA   46 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            467899999999999999999999999999999999987665443

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.15  E-value=5.1e-11  Score=90.96  Aligned_cols=68  Identities=19%  Similarity=0.207  Sum_probs=50.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+.+|+++||||++|||++++++|+++|++|++++|+.+...+...+.....+....++.+|++|..+
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~   71 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKED   71 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHH
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHH
Confidence            34578999999999999999999999999999998876554444444433444456677788877544

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.14  E-value=1.3e-10  Score=88.42  Aligned_cols=64  Identities=22%  Similarity=0.387  Sum_probs=50.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~-~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++++|+++|||+++|||+++++.|+++|++|++++|+. +.+++   ++.+ .+....++.+|++|..+
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~-~~~~~~~~~~Dv~~~~~   68 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRN-LGRRVLTVKCDVSQPGD   68 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHH-TTCCEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHh-cCCcEEEEEeecCCHHH
Confidence            47889999999999999999999999999999999998 66554   2322 23445567788877543

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.14  E-value=1.1e-10  Score=88.80  Aligned_cols=67  Identities=21%  Similarity=0.346  Sum_probs=55.4

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++++|+++|||+++|||++++++|+++|++|++++| +.+.+++..+++.+. +....++.+|++|..+
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~   71 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV-GGEAIAVKGDVTVESD   71 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCEEEEEECCTTSHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-CCceEEEECCCCCHHH
Confidence            467899999999999999999999999999999999 877777777776543 4445677888887543

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.13  E-value=8e-11  Score=90.81  Aligned_cols=62  Identities=23%  Similarity=0.373  Sum_probs=47.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      .+++|+++|||+++|||++++++|+++|++|++++|+++.+++..+++    .+ ..++.+|++|..
T Consensus         6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~Dv~d~~   67 (270)
T 1yde_A            6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----PG-AVFILCDVTQED   67 (270)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TT-EEEEECCTTSHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----cC-CeEEEcCCCCHH
Confidence            478999999999999999999999999999999999987665443332    11 344555655543

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.13  E-value=9.1e-11  Score=89.53  Aligned_cols=69  Identities=20%  Similarity=0.343  Sum_probs=53.2

Q ss_pred             CCCCCCCCEEEEeCCc--ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           74 REPMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s--~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +...+++|+++||||+  +|||++++++|+++|++|++++|+.. ..+.++++.+..+. ..++.+|++|..+
T Consensus         8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~-~~~~~~Dv~~~~~   78 (271)
T 3ek2_A            8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEFGS-ELVFPCDVADDAQ   78 (271)
T ss_dssp             -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTC-CCEEECCTTCHHH
T ss_pred             CccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchh-hHHHHHHHHHHcCC-cEEEECCCCCHHH
Confidence            4456889999999998  99999999999999999999999853 33444555555554 4566778777543

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.13  E-value=7.2e-11  Score=89.16  Aligned_cols=66  Identities=27%  Similarity=0.341  Sum_probs=52.2

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++++|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++...  ....++.+|++|..+
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~   68 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP--DQIQFFQHDSSDEDG   68 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT--TTEEEEECCTTCHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc--CceEEEECCCCCHHH
Confidence            478899999999999999999999999999999999987776655554321  234566777776543

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.13  E-value=1e-10  Score=89.28  Aligned_cols=44  Identities=32%  Similarity=0.608  Sum_probs=39.0

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      ++++|+++|||+++|||++++++|+++|++|++++|+.+. ++..
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~   46 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVA   46 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHH
Confidence            4788999999999999999999999999999999998765 4433

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.12  E-value=1.5e-10  Score=88.58  Aligned_cols=68  Identities=21%  Similarity=0.281  Sum_probs=52.6

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+.+++|+++||||++|||++++++|+++|++|++++|+.+..++..+++..  .....++.+|++|..+
T Consensus        11 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~   78 (278)
T 2bgk_A           11 TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS--PDVISFVHCDVTKDED   78 (278)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--TTTEEEEECCTTCHHH
T ss_pred             cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC--CCceEEEECCCCCHHH
Confidence            3457899999999999999999999999999999999998776655554421  1135566777776543

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.12  E-value=1e-10  Score=89.27  Aligned_cols=64  Identities=11%  Similarity=0.307  Sum_probs=53.4

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH--HHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER--VDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~--~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+.  +++..+++... +....++.+|++|..+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~   67 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA-DQKAVFVGLDVTDKAN   67 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT-TCCEEEEECCTTCHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc-CCcEEEEEccCCCHHH
Confidence            6899999999999999999999999999999999877  77776666543 3446677899988654

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.12  E-value=8.9e-11  Score=88.59  Aligned_cols=65  Identities=23%  Similarity=0.363  Sum_probs=52.1

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....+....++.+|++|..+
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   66 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGD   66 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHH
Confidence            67999999999999999999999999999999998887776666522223345667788887543

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.11  E-value=1.1e-10  Score=90.00  Aligned_cols=65  Identities=20%  Similarity=0.336  Sum_probs=51.5

Q ss_pred             CCCCCEEEEeCCc--ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           77 MLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        77 ~~~~k~~lVTG~s--~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      ++++|+++|||++  +|||+++++.|+++|++|++++|+.+ .++..+++.+..+. ..++.+|++|..
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~-~~~~~~D~~~~~   69 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNS-PYVYELDVSKEE   69 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTC-CCEEECCTTCHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCC-cEEEEcCCCCHH
Confidence            4678999999999  99999999999999999999999876 44555556555444 456677777654

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.11  E-value=1.8e-10  Score=87.45  Aligned_cols=66  Identities=26%  Similarity=0.390  Sum_probs=54.5

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHH-CCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLK-AGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~-~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .++|+++||||++|||+++++.|++ +|++|++++|+.+.+++..+++... +....++.+|++|..+
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~   68 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE-GLSPRFHQLDIDDLQS   68 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT-TCCCEEEECCTTCHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc-CCeeEEEECCCCCHHH
Confidence            3578999999999999999999999 9999999999988888777777654 3335567788887543

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.10  E-value=1.8e-10  Score=86.72  Aligned_cols=67  Identities=22%  Similarity=0.378  Sum_probs=53.9

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~-~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++++|+++|||+++|||++++++|+++|++|+++ .|+.+.+++..+++... +....++.+|++|..+
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   69 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA-GINVVVAKGDVKNPED   69 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT-TCCEEEEESCTTSHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc-CCcEEEEECCCCCHHH
Confidence            4678999999999999999999999999999998 67777777766666543 3345677888887543

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.10  E-value=2.1e-10  Score=86.92  Aligned_cols=67  Identities=27%  Similarity=0.364  Sum_probs=55.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~-~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++++|+++||||++|||+++++.|+++|++|+++ .|+.+.+++..+++... +....++.+|+++..+
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   71 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN-GGSAFSIGANLESLHG   71 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT-TCEEEEEECCTTSHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc-CCceEEEecCcCCHHH
Confidence            4789999999999999999999999999999885 67777888877777654 4456777888887543

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.09  E-value=2.1e-10  Score=87.95  Aligned_cols=69  Identities=23%  Similarity=0.338  Sum_probs=54.1

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEE-EeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i-~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ...+.+|+++||||++|||+++++.|+++|++|++ ..|+.+.+++..+++.+..+ ...++.+|++|..+
T Consensus        21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~   90 (267)
T 4iiu_A           21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGG-NGRLLSFDVANREQ   90 (267)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCC-ceEEEEecCCCHHH
Confidence            34578899999999999999999999999999966 45777778888777776544 45678889988654

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.09  E-value=1.1e-10  Score=89.88  Aligned_cols=62  Identities=27%  Similarity=0.412  Sum_probs=49.2

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      +.+|+++||||++|||++++++|+++|++|++++|+.+.+++..++    .+....++.+|++|..
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dv~~~~   64 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAA----YPDRAEAISLDVTDGE   64 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH----CTTTEEEEECCTTCHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----ccCCceEEEeeCCCHH
Confidence            5689999999999999999999999999999999998776654432    2444566677777654

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.09  E-value=2e-10  Score=87.95  Aligned_cols=66  Identities=20%  Similarity=0.385  Sum_probs=52.8

Q ss_pred             CCCCCEEEEeCCc--ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s--~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++++|+++|||++  +|||+++++.|+++|++|++++|+.+ .++..+++.+..+. ..++.+|++|..+
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~-~~~~~~D~~~~~~   72 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGG-ALLFRADVTQDEE   72 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTC-CEEEECCTTCHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCC-cEEEECCCCCHHH
Confidence            4678999999999  99999999999999999999999875 44455566555454 4667788887543

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.09  E-value=1.5e-10  Score=88.70  Aligned_cols=66  Identities=18%  Similarity=0.410  Sum_probs=52.8

Q ss_pred             CCCCCEEEEeCCc--ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s--~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++++|+++|||++  +|||++++++|+++|++|++++|+. ..++..+++.+..+.. .++.+|++|..+
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~-~~~~~D~~~~~~   73 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSD-IVLQCDVAEDAS   73 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCC-CEEECCTTCHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCc-EEEEccCCCHHH
Confidence            3788999999999  9999999999999999999999987 4555556665554543 567788887543

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.08  E-value=2e-10  Score=88.26  Aligned_cols=68  Identities=21%  Similarity=0.281  Sum_probs=50.7

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEe-CChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~-r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .++.+|+++||||++|||++++++|+++|++|++.+ ++.+..++..+++.. .+....++.+|++|..+
T Consensus        21 ~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~   89 (269)
T 3gk3_A           21 SMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERD-AGRDFKAYAVDVADFES   89 (269)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHT-TTCCCEEEECCTTCHHH
T ss_pred             hhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHh-cCCceEEEEecCCCHHH
Confidence            357889999999999999999999999999999998 555555555555443 34445677888887543

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.08  E-value=3e-10  Score=90.15  Aligned_cols=68  Identities=21%  Similarity=0.280  Sum_probs=50.4

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC-----hHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-----AERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ++++|+++||||++|||++++++|+++|++|++++|+     .+.++++.+++... +....++.+|++|+.++
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~-~~~~~~~~~Dvtd~~~v   74 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN-DVDLRTLELDVQSQVSV   74 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH-TCCEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc-CCcEEEEEeecCCHHHH
Confidence            4678999999999999999999999999999987775     44555555544443 44466778888876543

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.07  E-value=2.1e-10  Score=88.80  Aligned_cols=66  Identities=23%  Similarity=0.444  Sum_probs=52.8

Q ss_pred             CCCCCEEEEeCCc--ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s--~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++++|+++|||++  +|||+++++.|+++|++|++++|+.+ .++..+++.+..+. ..++.+|++|..+
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~-~~~~~~Dl~~~~~   85 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGS-DLVVKCDVSLDED   85 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTC-CCEEECCTTCHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCC-eEEEEcCCCCHHH
Confidence            3789999999999  99999999999999999999999875 45555666555454 4567788877543

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.07  E-value=2.3e-10  Score=86.09  Aligned_cols=63  Identities=29%  Similarity=0.315  Sum_probs=50.0

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      +++++|+++|||+++|||++++++|+++|++|++++|+.+++++..+++    .+. .++.+|++|..
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~-~~~~~D~~~~~   65 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC----PGI-EPVCVDLGDWE   65 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTC-EEEECCTTCHH
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CCC-CEEEEeCCCHH
Confidence            4578999999999999999999999999999999999987776554433    222 34477777654

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.07  E-value=2.6e-10  Score=85.68  Aligned_cols=65  Identities=23%  Similarity=0.304  Sum_probs=53.2

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~-~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +|+++|||+++|||++++++|+++|++|+++ +|+.+.+++..+++.....+...++.+|++|..+
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   66 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEA   66 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHH
Confidence            4789999999999999999999999999998 8998888877777765444433348899988544

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.07  E-value=1.8e-10  Score=87.84  Aligned_cols=64  Identities=27%  Similarity=0.409  Sum_probs=48.5

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +++|+++|||+++|||++++++|+++|++|++++|+.+  ++..+++... +....++.+|++|..+
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~-~~~~~~~~~D~~~~~~   65 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH-GVKAVHHPADLSDVAQ   65 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT-SCCEEEECCCTTSHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc-CCceEEEeCCCCCHHH
Confidence            67899999999999999999999999999999999875  3344444332 3334556677776543

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.06  E-value=1.2e-10  Score=88.44  Aligned_cols=69  Identities=14%  Similarity=0.164  Sum_probs=47.3

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEe-CChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~-r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      +....++|+++||||++|||++++++|+++|++|++.+ ++.+..++..+++.+. +....++.+|++|..
T Consensus         7 ~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~   76 (256)
T 3ezl_A            7 HHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL-GFDFYASEGNVGDWD   76 (256)
T ss_dssp             ------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT-TCCCEEEECCTTCHH
T ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCeeEEEecCCCCHH
Confidence            34457889999999999999999999999999999987 5555555555555433 333455666666643

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.06  E-value=4.5e-10  Score=85.28  Aligned_cols=64  Identities=19%  Similarity=0.229  Sum_probs=49.8

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHHHHHh-CCeEEEEEcccCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSLREEF-GEQHVVQNVMLAKG  142 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~-V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~~~dv~~~  142 (147)
                      ++++|+++||||++|||++++++|+++|++ |++++|+.+.  +..+++.+.. +....++.+|++|.
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~   67 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVP   67 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSC
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCC
Confidence            478999999999999999999999999996 9999998642  2334444443 23456778898876

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.06  E-value=7.9e-10  Score=85.24  Aligned_cols=67  Identities=21%  Similarity=0.364  Sum_probs=55.9

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH-----------------HHHHHHHHHHHHhCCeEEEEE
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-----------------RVDSAVQSLREEFGEQHVVQN  136 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~-----------------~~~~~~~~l~~~~~~~~~~~~  136 (147)
                      +...+++|+++||||++|||++++++|+++|++|++++|+.+                 ..+++++++.+.++..+++++
T Consensus         8 ~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~   87 (269)
T 3vtz_A            8 HMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVN   87 (269)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            455789999999999999999999999999999999988643                 455677778888899999998


Q ss_pred             cccC
Q 032110          137 VMLA  140 (147)
Q Consensus       137 ~dv~  140 (147)
                      +...
T Consensus        88 nAg~   91 (269)
T 3vtz_A           88 NAGI   91 (269)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            8765

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.06  E-value=2.9e-10  Score=86.60  Aligned_cols=72  Identities=18%  Similarity=0.247  Sum_probs=52.5

Q ss_pred             CCCCCCCCCCEEEEeCCcChHHHHHHHHHHHCC---CEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           72 VKREPMLPPYNVLITGSTKGIGYALAKEFLKAG---DNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        72 ~~~~~~~~~k~~lVTG~s~GIG~~~a~~La~~G---a~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ..+...+++|+++||||++|||++++++|+++|   ++|++++|+.+..+++ +++.+.. ....++.+|+++..++
T Consensus        13 ~~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~-~~~~~~~~Dl~~~~~v   87 (267)
T 1sny_A           13 GLVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNH-SNIHILEIDLRNFDAY   87 (267)
T ss_dssp             -------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHC-TTEEEEECCTTCGGGH
T ss_pred             cccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccC-CceEEEEecCCChHHH
Confidence            344556889999999999999999999999999   9999999998765543 4454443 3456778999886654

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.05  E-value=1.1e-10  Score=88.57  Aligned_cols=43  Identities=26%  Similarity=0.421  Sum_probs=39.2

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      .+++|+++|||+++|||++++++|+++|++|++++|+++++++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~   45 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE   45 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGG
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            4688999999999999999999999999999999999876543

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.05  E-value=1.2e-10  Score=87.40  Aligned_cols=60  Identities=23%  Similarity=0.343  Sum_probs=49.7

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      |+++||||++|||++++++|+++|++|++++|+++.+++..+++    +....++.+|+++..+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~   61 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL----SNNVGYRARDLASHQE   61 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC----SSCCCEEECCTTCHHH
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----hhccCeEeecCCCHHH
Confidence            68999999999999999999999999999999998887766554    4445677888887543

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.05  E-value=2.1e-10  Score=87.54  Aligned_cols=41  Identities=27%  Similarity=0.445  Sum_probs=33.6

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~  116 (147)
                      +++++|+++|||+++|||++++++|+++|++|++++|+.++
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~   45 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGED   45 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHH
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHH
Confidence            46789999999999999999999999999999999986543

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.04  E-value=5.5e-10  Score=83.90  Aligned_cols=64  Identities=28%  Similarity=0.405  Sum_probs=53.1

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEE-EeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i-~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ||+++||||++|||++++++|+++|++|++ .+|+.+..++..+++... +....++.+|+++..+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   65 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY-GGQAITFGGDVSKEAD   65 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH-TCEEEEEECCTTSHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCcEEEEeCCCCCHHH
Confidence            579999999999999999999999999999 489888887777776654 4456677899988654

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.04  E-value=4.3e-10  Score=84.48  Aligned_cols=63  Identities=22%  Similarity=0.221  Sum_probs=49.3

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      .++++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++    .+. .++.+|++|..
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~-~~~~~D~~~~~   65 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGI-EPVCVDLGDWD   65 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTC-EEEECCTTCHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCC-CcEEecCCCHH
Confidence            4578999999999999999999999999999999999987766544332    222 23477777644

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.02  E-value=4.2e-10  Score=85.77  Aligned_cols=60  Identities=27%  Similarity=0.505  Sum_probs=49.6

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      |+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++    +....++.+|++|..+
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~   60 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL----GDNLYIAQLDVRNRAA   60 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CTTEEEEECCTTCHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----cCceEEEEcCCCCHHH
Confidence            58999999999999999999999999999999988877665554    2335667888887543

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.02  E-value=1.4e-10  Score=89.38  Aligned_cols=64  Identities=28%  Similarity=0.441  Sum_probs=51.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH---------------------HHHHHHHHHHhCCeEEEE
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV---------------------DSAVQSLREEFGEQHVVQ  135 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~---------------------~~~~~~l~~~~~~~~~~~  135 (147)
                      .+.+|+++||||++|||+++++.|+++|++|++++|+.+.+                     +++++++.+.++..++++
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   92 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIV   92 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence            46789999999999999999999999999999999986543                     344556666777888888


Q ss_pred             EcccC
Q 032110          136 NVMLA  140 (147)
Q Consensus       136 ~~dv~  140 (147)
                      ++...
T Consensus        93 nnAg~   97 (266)
T 3p19_A           93 NNAGM   97 (266)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            77654

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.02  E-value=1.1e-09  Score=84.49  Aligned_cols=67  Identities=22%  Similarity=0.268  Sum_probs=55.0

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH----------------HHHHHHHHHHHHhCCeEEEEEcc
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE----------------RVDSAVQSLREEFGEQHVVQNVM  138 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~----------------~~~~~~~~l~~~~~~~~~~~~~d  138 (147)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.+                ..++.++++.+.++..++++++.
T Consensus        23 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnA  102 (266)
T 3uxy_A           23 MQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNA  102 (266)
T ss_dssp             ---CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSEECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             hhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhhccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            45689999999999999999999999999999999988643                34556677788889999999887


Q ss_pred             cCC
Q 032110          139 LAK  141 (147)
Q Consensus       139 v~~  141 (147)
                      ...
T Consensus       103 g~~  105 (266)
T 3uxy_A          103 GVI  105 (266)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            653

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.00  E-value=4.1e-10  Score=84.32  Aligned_cols=59  Identities=25%  Similarity=0.282  Sum_probs=44.9

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      .+|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++    + ...++.+|++|.
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~D~~~~   62 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL----E-GALPLPGDVREE   62 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----T-TCEEEECCTTCH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----h-hceEEEecCCCH
Confidence            4679999999999999999999999999999999987665543332    1 133445555553

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.00  E-value=5.7e-10  Score=83.92  Aligned_cols=64  Identities=30%  Similarity=0.390  Sum_probs=53.3

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCC-------EEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGD-------NVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga-------~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +|+++||||++|||+++++.|+++|+       +|++++|+.+.+++..+++... +....++.+|++|..+
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   72 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE-GALTDTITADISDMAD   72 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT-TCEEEEEECCTTSHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc-CCeeeEEEecCCCHHH
Confidence            67999999999999999999999999       9999999988887777666543 4446677888887543

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.00  E-value=1.8e-09  Score=82.62  Aligned_cols=68  Identities=34%  Similarity=0.458  Sum_probs=52.8

Q ss_pred             CCCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh----------------HHHHHHHHHHHHHhCCeEEEEE
Q 032110           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA----------------ERVDSAVQSLREEFGEQHVVQN  136 (147)
Q Consensus        73 ~~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~----------------~~~~~~~~~l~~~~~~~~~~~~  136 (147)
                      .+..++.+|+++|||+++|||++++++|+++|++|++++|+.                +..+++++++.+.++..+++++
T Consensus        14 ~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~   93 (253)
T 2nm0_A           14 LVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIA   93 (253)
T ss_dssp             ------CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEE
T ss_pred             CCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhccceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            344567899999999999999999999999999999998864                3455667777778888888888


Q ss_pred             cccC
Q 032110          137 VMLA  140 (147)
Q Consensus       137 ~dv~  140 (147)
                      +...
T Consensus        94 nAg~   97 (253)
T 2nm0_A           94 NAGV   97 (253)
T ss_dssp             ECSC
T ss_pred             CCCC
Confidence            7654

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=98.99  E-value=1.9e-09  Score=82.11  Aligned_cols=65  Identities=15%  Similarity=0.137  Sum_probs=53.3

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh---------------HHHHHHHHHHHHHhCCeEEEEEcccC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA---------------ERVDSAVQSLREEFGEQHVVQNVMLA  140 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~---------------~~~~~~~~~l~~~~~~~~~~~~~dv~  140 (147)
                      ....+|+++||||++|||++++++|+++|++|++++|+.               +..+++++++.+.++..++++++...
T Consensus        18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~   97 (251)
T 3orf_A           18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGG   97 (251)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCC
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence            344578999999999999999999999999999999865               34566777777788999999998764

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=98.98  E-value=4.2e-10  Score=86.45  Aligned_cols=40  Identities=18%  Similarity=0.375  Sum_probs=37.0

Q ss_pred             CCCCCEEEEeCC--cChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110           77 MLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSAER  116 (147)
Q Consensus        77 ~~~~k~~lVTG~--s~GIG~~~a~~La~~Ga~V~i~~r~~~~  116 (147)
                      .+++|+++|||+  ++|||+++++.|+++|++|++++|+.+.
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~   45 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLR   45 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHH
Confidence            478999999999  9999999999999999999999998754

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=98.98  E-value=3e-09  Score=80.79  Aligned_cols=65  Identities=31%  Similarity=0.344  Sum_probs=54.7

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh-----------------HHHHHHHHHHHHHhCCeEEEEEcc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-----------------ERVDSAVQSLREEFGEQHVVQNVM  138 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~-----------------~~~~~~~~~l~~~~~~~~~~~~~d  138 (147)
                      +++++|+++|||+++|||+++++.|+++|++|++++|+.                 +..+++++++.+.++..++++++.
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~A   82 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAA   82 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSSCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhhcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            357899999999999999999999999999999998863                 345666777777888888888877


Q ss_pred             cC
Q 032110          139 LA  140 (147)
Q Consensus       139 v~  140 (147)
                      ..
T Consensus        83 g~   84 (250)
T 2fwm_X           83 GI   84 (250)
T ss_dssp             CC
T ss_pred             Cc
Confidence            64

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=98.97  E-value=2.9e-09  Score=81.71  Aligned_cols=65  Identities=29%  Similarity=0.335  Sum_probs=55.7

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh------------------HHHHHHHHHHHHHhCCeEEEEEc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA------------------ERVDSAVQSLREEFGEQHVVQNV  137 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~  137 (147)
                      +.+++|+++||||++|||++++++|+++|++|++++|+.                  +..+++++++.+.+++.++++++
T Consensus        24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~n  103 (260)
T 3un1_A           24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPDIHTVAGDISKPETADRIVREGIERFGRIDSLVNN  103 (260)
T ss_dssp             HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEEC
Confidence            457899999999999999999999999999999999863                  34566777888888999999988


Q ss_pred             ccC
Q 032110          138 MLA  140 (147)
Q Consensus       138 dv~  140 (147)
                      ...
T Consensus       104 Ag~  106 (260)
T 3un1_A          104 AGV  106 (260)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            764

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=98.96  E-value=3.1e-09  Score=80.65  Aligned_cols=65  Identities=29%  Similarity=0.456  Sum_probs=54.5

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH----------------HHHHHHHHHHHHhCCeEEEEEccc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE----------------RVDSAVQSLREEFGEQHVVQNVML  139 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~----------------~~~~~~~~l~~~~~~~~~~~~~dv  139 (147)
                      +.+++|+++|||+++|||++++++|+++|++|++++|+.+                ..++.++++.+.++..++++++..
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag   90 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAG   90 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECS
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhcCeeccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            4578999999999999999999999999999999988642                345666777778888888888766


Q ss_pred             C
Q 032110          140 A  140 (147)
Q Consensus       140 ~  140 (147)
                      .
T Consensus        91 ~   91 (247)
T 1uzm_A           91 L   91 (247)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=98.95  E-value=9.9e-10  Score=83.77  Aligned_cols=61  Identities=16%  Similarity=0.237  Sum_probs=48.1

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +|+++||||++|||++++++|+++|  +.|++.+|+++.+++..+++    +....++.+|++|..+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~   64 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY----GDRFFYVVGDITEDSV   64 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH----GGGEEEEESCTTSHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh----CCceEEEECCCCCHHH
Confidence            6899999999999999999999985  78999999988776655443    3345666777776543

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=98.94  E-value=7e-09  Score=80.88  Aligned_cols=69  Identities=16%  Similarity=0.169  Sum_probs=54.7

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEE-EcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ-NVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~-~~dv~~~~~~  145 (147)
                      .+++|+++||||+|+||.+++++|+++|++|++++|+.+..+...+.+....+....++ .+|++|...+
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~   77 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAY   77 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTT
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHH
Confidence            46788999999999999999999999999999999998877666555544333334455 7899886654

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=98.93  E-value=2.8e-09  Score=79.80  Aligned_cols=60  Identities=15%  Similarity=0.171  Sum_probs=44.6

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeE-EEEEcccC
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH-VVQNVMLA  140 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~-~~~~~dv~  140 (147)
                      +.+.+++|+++||||+|+||.+++++|+++|++|++++|+.+.+++....      + . .++.+|++
T Consensus        15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~------~-~~~~~~~Dl~   75 (236)
T 3e8x_A           15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRER------G-ASDIVVANLE   75 (236)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHT------T-CSEEEECCTT
T ss_pred             cccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhC------C-CceEEEcccH
Confidence            45678899999999999999999999999999999999998876654221      2 3 45666765

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.93  E-value=7.5e-10  Score=82.98  Aligned_cols=62  Identities=23%  Similarity=0.413  Sum_probs=46.1

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      |++|+++|||+++|||+++++.|+++|  ++|++++|+.+.++++. ++   .+....++.+|+++..
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~-~~---~~~~~~~~~~D~~~~~   64 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK-SI---KDSRVHVLPLTVTCDK   64 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH-TC---CCTTEEEEECCTTCHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHH-hc---cCCceEEEEeecCCHH
Confidence            457899999999999999999999999  99999999876654331 11   1223445566666543

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=98.93  E-value=6.1e-09  Score=78.59  Aligned_cols=64  Identities=13%  Similarity=0.072  Sum_probs=52.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH-----------------HHHHHHHHHHHHh--CCeEEEEEc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-----------------RVDSAVQSLREEF--GEQHVVQNV  137 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~-----------------~~~~~~~~l~~~~--~~~~~~~~~  137 (147)
                      +.++|+++|||+++|||++++++|+++|++|++++|+++                 ..+++++++.+.+  +..++++++
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~   83 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCV   83 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccCCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEc
Confidence            356889999999999999999999999999999998742                 3455666777777  688999988


Q ss_pred             ccC
Q 032110          138 MLA  140 (147)
Q Consensus       138 dv~  140 (147)
                      ...
T Consensus        84 Ag~   86 (241)
T 1dhr_A           84 AGG   86 (241)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            764

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=98.92  E-value=4.8e-09  Score=80.51  Aligned_cols=64  Identities=30%  Similarity=0.447  Sum_probs=54.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh----------------HHHHHHHHHHHHHhCCeEEEEEcccC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA----------------ERVDSAVQSLREEFGEQHVVQNVMLA  140 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~----------------~~~~~~~~~l~~~~~~~~~~~~~dv~  140 (147)
                      ++++|+++|||+++|||+++++.|+++|++|++++|+.                +..+++++++.+.++..++++++...
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~   84 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGI   84 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCSCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            46789999999999999999999999999999998863                34566777788888888999987764

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=98.92  E-value=2.3e-09  Score=84.81  Aligned_cols=50  Identities=28%  Similarity=0.446  Sum_probs=41.1

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEe---------CChHHHHHHHHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS---------RSAERVDSAVQSLR  125 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~---------r~~~~~~~~~~~l~  125 (147)
                      +++++|+++|||+++|||+++++.|+++|++|++.+         |+.+.+++..+++.
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~   63 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR   63 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHH
Confidence            467899999999999999999999999999999964         45666655555544

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.92  E-value=5.5e-09  Score=78.53  Aligned_cols=63  Identities=21%  Similarity=0.229  Sum_probs=51.7

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH-----------------HHHHHHHHHHHHh--CCeEEEEEcc
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-----------------RVDSAVQSLREEF--GEQHVVQNVM  138 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~-----------------~~~~~~~~l~~~~--~~~~~~~~~d  138 (147)
                      |++|+++|||+++|||++++++|+++|++|++++|+++                 ..+++++++.+.+  ++.++++++.
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~A   80 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVA   80 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccccccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECC
Confidence            46789999999999999999999999999999998743                 2445566677777  6889999887


Q ss_pred             cC
Q 032110          139 LA  140 (147)
Q Consensus       139 v~  140 (147)
                      ..
T Consensus        81 g~   82 (236)
T 1ooe_A           81 GG   82 (236)
T ss_dssp             CC
T ss_pred             cc
Confidence            64

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=98.90  E-value=1.4e-09  Score=85.16  Aligned_cols=66  Identities=20%  Similarity=0.268  Sum_probs=53.6

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+++++||||+|+||.+++++|+++|++|++++|+.+..++..+++....+....++.+|++|..+
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~   69 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERA   69 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHH
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHH
Confidence            467999999999999999999999999999999987766666666655555556677888887543

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=98.89  E-value=2e-09  Score=80.34  Aligned_cols=66  Identities=21%  Similarity=0.150  Sum_probs=50.0

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH---HHHHHHHHHHHHhCCeEEEEEcccCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE---RVDSAVQSLREEFGEQHVVQNVMLAK  141 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~---~~~~~~~~l~~~~~~~~~~~~~dv~~  141 (147)
                      +.+++|+++|||+++|||++++++|+++|++|++++|+.+   .-.+.++++.++++..++++++....
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~D~~~~~~v~~~~~~~g~id~lv~nAg~~   70 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTGLDISDEKSVYHYFETIGAFDHLIVTAGSY   70 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGTCCTTCHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcccCCCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence            3578999999999999999999999999999999998643   11223344445568889999887643

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=98.89  E-value=2.2e-09  Score=91.91  Aligned_cols=56  Identities=21%  Similarity=0.289  Sum_probs=42.2

Q ss_pred             CCCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC---------ChHHHHHHHHHHHHHh
Q 032110           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR---------SAERVDSAVQSLREEF  128 (147)
Q Consensus        73 ~~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r---------~~~~~~~~~~~l~~~~  128 (147)
                      ....+++||+++||||++|||+++|+.|+++|++|++++|         +.+.+++..+++.+..
T Consensus        12 ~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~   76 (613)
T 3oml_A           12 DGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAG   76 (613)
T ss_dssp             ---CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTT
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhC
Confidence            3456789999999999999999999999999999999988         6666677767666543

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=98.88  E-value=1.3e-09  Score=89.88  Aligned_cols=66  Identities=18%  Similarity=0.079  Sum_probs=50.5

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHH-CCCEEEEEeCChHHHHH-----------HH-HHHHHHhCCeEEEEEcccCCCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLK-AGDNVIICSRSAERVDS-----------AV-QSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~-~Ga~V~i~~r~~~~~~~-----------~~-~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ..+|+++||||++|||+++++.|++ +|++|++++|+.+.+++           .. +++. ..+.....+.+|++++..
T Consensus        59 ~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~-~~G~~a~~i~~Dvtd~~~  137 (422)
T 3s8m_A           59 DGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAK-AAGLYSKSINGDAFSDAA  137 (422)
T ss_dssp             SSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHH-HTTCCEEEEESCTTSHHH
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHH-hcCCcEEEEEecCCCHHH
Confidence            3589999999999999999999999 99999999987654321           22 3333 345556778888888654

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=98.86  E-value=7.6e-09  Score=77.96  Aligned_cols=37  Identities=38%  Similarity=0.628  Sum_probs=34.8

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~  116 (147)
                      +|+++|||+++|||++++++|+++|++|++++|+.+.
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~   38 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE   38 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            6899999999999999999999999999999998765

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=98.86  E-value=8.4e-09  Score=80.09  Aligned_cols=37  Identities=27%  Similarity=0.456  Sum_probs=34.2

Q ss_pred             CCCCCCEEEEeCCc--ChHHHHHHHHHHHCCCEEEEEeC
Q 032110           76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSR  112 (147)
Q Consensus        76 ~~~~~k~~lVTG~s--~GIG~~~a~~La~~Ga~V~i~~r  112 (147)
                      +++++|+++||||+  +|||++++++|+++|++|++++|
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r   42 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTW   42 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEE
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeec
Confidence            45789999999999  99999999999999999999874

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.85  E-value=1.1e-08  Score=77.75  Aligned_cols=43  Identities=33%  Similarity=0.514  Sum_probs=37.5

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~  116 (147)
                      ....+++|+++||||++|||++++++|+++|++|++++|+++.
T Consensus        13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~   55 (249)
T 1o5i_A           13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL   55 (249)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             HHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence            3456889999999999999999999999999999999998743

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=98.84  E-value=2.9e-09  Score=87.26  Aligned_cols=68  Identities=16%  Similarity=0.065  Sum_probs=50.5

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHH-CCCEEEEEeCChHHHH-----------HHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLK-AGDNVIICSRSAERVD-----------SAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~-~Ga~V~i~~r~~~~~~-----------~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ..+|+++||||++|||+++++.|++ +|++|++++++.+..+           +..++..+..+.....+.+|++++.++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            4689999999999999999999999 9999999988754322           222322233455566788888886543

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.82  E-value=7.9e-09  Score=80.44  Aligned_cols=64  Identities=19%  Similarity=0.307  Sum_probs=51.6

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAK  141 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~  141 (147)
                      ..+++|+++|||++||+|+++++.|+++|++|++++|+.++.++..+++....+  ..++.+|+++
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~--~~~~~~D~~~  178 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFK--VNVTAAETAD  178 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHT--CCCEEEECCS
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEecCCC
Confidence            357889999999999999999999999999999999999888888777754322  2344556554

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=98.81  E-value=1.4e-09  Score=86.32  Aligned_cols=67  Identities=15%  Similarity=0.108  Sum_probs=48.8

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHh-----CCeEEEEEcccCCCCCc
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF-----GEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~dv~~~~~~  145 (147)
                      ++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++....     +....++.+|++|..++
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v   72 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSV   72 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHH
Confidence            36899999999999999999999999998888776544433333332221     23456788999986543

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=98.80  E-value=5.2e-09  Score=86.17  Aligned_cols=68  Identities=18%  Similarity=0.112  Sum_probs=52.0

Q ss_pred             CCCCEEEEeCCcChHHHH--HHHHHHHCCCEEEEEeCChHHH-----------HHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           78 LPPYNVLITGSTKGIGYA--LAKEFLKAGDNVIICSRSAERV-----------DSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~--~a~~La~~Ga~V~i~~r~~~~~-----------~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ..+|+++||||++|||++  ++++|+++|++|++++|+.+..           .+..+++.+..+.....+.+|+++..+
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            678999999999999999  9999999999999999865431           233344444456667778899988654


Q ss_pred             c
Q 032110          145 W  145 (147)
Q Consensus       145 ~  145 (147)
                      +
T Consensus       138 v  138 (418)
T 4eue_A          138 K  138 (418)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=98.80  E-value=2e-08  Score=78.78  Aligned_cols=38  Identities=26%  Similarity=0.436  Sum_probs=34.8

Q ss_pred             CCCCCCEEEEeCC--cChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           76 PMLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~~~~k~~lVTG~--s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      +++++|+++||||  ++|||+++++.|+++|++|++++|+
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWP   44 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECH
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecc
Confidence            3578999999999  8999999999999999999999864

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=98.80  E-value=1.7e-08  Score=79.26  Aligned_cols=38  Identities=24%  Similarity=0.418  Sum_probs=34.7

Q ss_pred             CCCCCCEEEEeCC--cChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           76 PMLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~~~~k~~lVTG~--s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      +++++|+++|||+  ++|||+++++.|+++|++|++++|+
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWP   44 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEecc
Confidence            3578999999999  8999999999999999999999864

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=98.79  E-value=1e-08  Score=87.74  Aligned_cols=50  Identities=26%  Similarity=0.373  Sum_probs=40.2

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh---------HHHHHHHHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA---------ERVDSAVQSLR  125 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~---------~~~~~~~~~l~  125 (147)
                      +++++|+++|||+++|||+++++.|+++|++|++.+|+.         +.+++..+++.
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~   62 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIV   62 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHH
Confidence            357899999999999999999999999999999998764         44555555544

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=98.78  E-value=7.7e-09  Score=78.13  Aligned_cols=44  Identities=23%  Similarity=0.377  Sum_probs=36.4

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      ++++|+++||||++|||++++++|++ |++|++++|+.+.+++..
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~   45 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALA   45 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHH
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHH
Confidence            46789999999999999999999998 999999999988776543

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=98.78  E-value=1.4e-08  Score=95.63  Aligned_cols=71  Identities=27%  Similarity=0.380  Sum_probs=59.3

Q ss_pred             CCCCCCCEEEEeCCcCh-HHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHHHh---CCeEEEEEcccCCCCCc
Q 032110           75 EPMLPPYNVLITGSTKG-IGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEF---GEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~G-IG~~~a~~La~~Ga~V~i~-~r~~~~~~~~~~~l~~~~---~~~~~~~~~dv~~~~~~  145 (147)
                      .++++||+++||||++| ||+++++.|+++|++|+++ +|+.+.+++..+++.+..   +....++.+|++|..++
T Consensus       670 ~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV  745 (1887)
T 2uv8_A          670 GVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDV  745 (1887)
T ss_dssp             CBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHH
T ss_pred             cCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHH
Confidence            34688999999999998 9999999999999999998 688888888878876654   44567889999986543

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=98.78  E-value=3.7e-08  Score=81.63  Aligned_cols=66  Identities=17%  Similarity=0.315  Sum_probs=47.3

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ..+++|+++||||++|||+++++.|+++|++|++++|+... ++ .+++.+..+  ..++.+|++|..++
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~-l~~~~~~~~--~~~~~~Dvtd~~~v  274 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-ED-LKRVADKVG--GTALTLDVTADDAV  274 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HH-HHHHHHHHT--CEEEECCTTSTTHH
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HH-HHHHHHHcC--CeEEEEecCCHHHH
Confidence            34689999999999999999999999999999999986432 11 122222222  23567777776543

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.77  E-value=3.8e-08  Score=73.46  Aligned_cols=60  Identities=25%  Similarity=0.270  Sum_probs=50.3

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh---------------HHHHHHHHHHHHHhCCeEEEEEcccC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA---------------ERVDSAVQSLREEFGEQHVVQNVMLA  140 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~---------------~~~~~~~~~l~~~~~~~~~~~~~dv~  140 (147)
                      +|+++|||+++|||++++++|+++|++|++++|+.               +..+++++++ +.++..++++++...
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d~li~~ag~   76 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVARA-QEEAPLFAVVSAAGV   76 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSSSSEEEECCTTCHHHHHHHHHHH-HHHSCEEEEEECCCC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCccccceEEEeCCCCCHHHHHHHHHHH-HhhCCceEEEEcccc
Confidence            57999999999999999999999999999998864               3456667777 677888888887654

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=98.76  E-value=1.4e-08  Score=76.77  Aligned_cols=61  Identities=11%  Similarity=0.008  Sum_probs=48.4

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEE-e--CChHHHHHHHH------------------HHHHHhCCeEEEEEcc
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIIC-S--RSAERVDSAVQ------------------SLREEFGEQHVVQNVM  138 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~-~--r~~~~~~~~~~------------------~l~~~~~~~~~~~~~d  138 (147)
                      +|+++|||+++|||+++++.|+++|++|+++ +  |+.+.+++..+                  ++.+.++..++++++.
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lv~~A   80 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTIALAEQKPERLVDATLQHGEAIDTIVSND   80 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTEEECCCCCGGGHHHHHGGGSSCEEEEEECC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            5799999999999999999999999999999 6  98877665433                  3334456778888876


Q ss_pred             cC
Q 032110          139 LA  140 (147)
Q Consensus       139 v~  140 (147)
                      ..
T Consensus        81 g~   82 (244)
T 1zmo_A           81 YI   82 (244)
T ss_dssp             CC
T ss_pred             Cc
Confidence            54

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=98.76  E-value=1.4e-08  Score=77.32  Aligned_cols=60  Identities=17%  Similarity=0.222  Sum_probs=47.6

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH---------------------HHHHHHHHhCCeEEEEEccc
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS---------------------AVQSLREEFGEQHVVQNVML  139 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~---------------------~~~~l~~~~~~~~~~~~~dv  139 (147)
                      |+++|||+++|||+++++.|+++|++|++++|+.+.+++                     +++++.+.++..++++++..
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~nAg   81 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDI   81 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            689999999999999999999999999999998765433                     33444556677777777665


Q ss_pred             C
Q 032110          140 A  140 (147)
Q Consensus       140 ~  140 (147)
                      .
T Consensus        82 ~   82 (254)
T 1zmt_A           82 F   82 (254)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=98.74  E-value=2.2e-08  Score=94.21  Aligned_cols=70  Identities=24%  Similarity=0.320  Sum_probs=57.6

Q ss_pred             CCCCCCEEEEeCCcCh-HHHHHHHHHHHCCCEEEEEe-CChHHHHHHHHHHHHHh---CCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKG-IGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEF---GEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~G-IG~~~a~~La~~Ga~V~i~~-r~~~~~~~~~~~l~~~~---~~~~~~~~~dv~~~~~~  145 (147)
                      +++++|+++||||++| ||+++++.|+++|++|++++ |+.+.+++..+++.++.   +....++.+|++|..++
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV  722 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDV  722 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHH
Confidence            4588999999999999 99999999999999999985 77777777777775554   44567889999986543

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=98.73  E-value=4.1e-08  Score=77.64  Aligned_cols=35  Identities=26%  Similarity=0.352  Sum_probs=31.0

Q ss_pred             CCCEEEEeCCcC--hHHHHHHHHHHHCCCEEEEEeCC
Q 032110           79 PPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~~k~~lVTG~s~--GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      ++|+++|||+++  |||+++|++|+++|++|++.+++
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~   37 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWP   37 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECH
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecC
Confidence            478999999875  99999999999999999977644

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=98.72  E-value=1.2e-08  Score=85.97  Aligned_cols=67  Identities=18%  Similarity=0.233  Sum_probs=52.7

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCE-EEEE-eCC-------------hHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDN-VIIC-SRS-------------AERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~-V~i~-~r~-------------~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      -++|+++||||++|||+++++.|+++|++ |+++ +|+             .+.+++..+++.+. +....++.+|++|.
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~v~~~~~Dvtd~  327 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL-GATATVVTCDLTDA  327 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH-TCEEEEEECCTTSH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc-CCEEEEEECCCCCH
Confidence            36789999999999999999999999987 7777 888             34556677777654 55678889999986


Q ss_pred             CCc
Q 032110          143 MKW  145 (147)
Q Consensus       143 ~~~  145 (147)
                      .++
T Consensus       328 ~~v  330 (525)
T 3qp9_A          328 EAA  330 (525)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=98.72  E-value=2e-08  Score=74.46  Aligned_cols=59  Identities=15%  Similarity=0.202  Sum_probs=46.7

Q ss_pred             CEEEEeCCcChHHHHHHHHHH-HCCCEEEEEeCChH-HHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           81 YNVLITGSTKGIGYALAKEFL-KAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La-~~Ga~V~i~~r~~~-~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      |+++|||++||||++++++|+ ++|++|++++|+++ ++++..    .. +....++.+|++|..+
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~-~~~~~~~~~D~~d~~~   66 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----ID-HERVTVIEGSFQNPGX   66 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HT-STTEEEEECCTTCHHH
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cC-CCceEEEECCCCCHHH
Confidence            689999999999999999999 89999999999987 554432    12 3335677888887543

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=98.70  E-value=2.9e-08  Score=83.25  Aligned_cols=65  Identities=23%  Similarity=0.313  Sum_probs=52.7

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCCh---HHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA---ERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~---~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +|+++||||++|||+++++.|+++|+ +|++++|+.   +..++..+++.+. +....++.+|++|..++
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~-g~~v~~~~~Dvtd~~~v  307 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL-GVRVTIAACDAADREAL  307 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT-TCEEEEEECCTTCHHHH
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc-CCeEEEEEccCCCHHHH
Confidence            58999999999999999999999998 899999964   3456666666653 55677889999986543

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=98.70  E-value=1.5e-08  Score=98.95  Aligned_cols=68  Identities=18%  Similarity=0.221  Sum_probs=54.1

Q ss_pred             CCCCCEEEEeCCcCh-HHHHHHHHHHHCCCEEEEEeCChHH-----HHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKG-IGYALAKEFLKAGDNVIICSRSAER-----VDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~G-IG~~~a~~La~~Ga~V~i~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .++||+++||||++| ||+++|+.|+++|++|++++|+.+.     ++++.+++.. .+.....+.+|+++..++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~-~G~~~~~v~~Dvtd~~~v 2206 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHAR-FDATLWVVPANMASYSDI 2206 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCC-TTCEEEEEECCTTCHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhh-cCCeEEEEEecCCCHHHH
Confidence            478999999999999 9999999999999999999998765     4444444432 244567789999986554

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=98.69  E-value=3.5e-09  Score=81.08  Aligned_cols=38  Identities=13%  Similarity=0.252  Sum_probs=34.8

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      |++|+++|||++||||+++++.|+++|++|++++|++.
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~   38 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPL   38 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCc
Confidence            34679999999999999999999999999999999864

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=98.69  E-value=1.1e-08  Score=94.53  Aligned_cols=71  Identities=27%  Similarity=0.386  Sum_probs=57.4

Q ss_pred             CCCCCCCEEEEeCCcCh-HHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHHHh---CCeEEEEEcccCCCCCc
Q 032110           75 EPMLPPYNVLITGSTKG-IGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEF---GEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~G-IG~~~a~~La~~Ga~V~i~-~r~~~~~~~~~~~l~~~~---~~~~~~~~~dv~~~~~~  145 (147)
                      .+.+++|+++||||++| ||+++++.|+++|++|+++ +|+.+.+++..+++.++.   +....++.+|++|..++
T Consensus       471 ~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esV  546 (1688)
T 2pff_A          471 XVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDV  546 (1688)
T ss_dssp             CCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHH
T ss_pred             ccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHH
Confidence            44688999999999998 9999999999999999998 677777766666664443   44567889999987654

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=98.69  E-value=3.1e-08  Score=78.66  Aligned_cols=64  Identities=19%  Similarity=0.234  Sum_probs=51.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHC-CC-EEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKA-GD-NVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~-Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      ++++|+++||||+|+||.++++.|+++ |+ +|++++|++.+.++..+++.   .....++.+|++|..
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~v~~~~~Dl~d~~   83 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN---DPRMRFFIGDVRDLE   83 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC---CTTEEEEECCTTCHH
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc---CCCEEEEECCCCCHH
Confidence            467899999999999999999999999 97 99999999887766555442   223566788888754

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=98.67  E-value=3.4e-08  Score=74.68  Aligned_cols=61  Identities=18%  Similarity=0.174  Sum_probs=47.0

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH----------HHHHHHHHHHh-CCeEEEEEcccCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV----------DSAVQSLREEF-GEQHVVQNVMLAK  141 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~----------~~~~~~l~~~~-~~~~~~~~~dv~~  141 (147)
                      |+++|||+++|||+++++.|+++|++|++++|+++.+          .+.++++.+++ +..++++++....
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~   73 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLG   73 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhccccccCCCCHHHHHHHHHHhCCCCCEEEECCCCC
Confidence            6899999999999999999999999999999986421          12233444445 6778888877653

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=98.65  E-value=6.6e-08  Score=82.75  Aligned_cols=38  Identities=37%  Similarity=0.436  Sum_probs=35.2

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      ..+++|+++|||+++|||+++++.|+++|++|++.++.
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~  355 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK  355 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc
Confidence            46889999999999999999999999999999999863

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=98.65  E-value=7.7e-09  Score=77.36  Aligned_cols=61  Identities=23%  Similarity=0.284  Sum_probs=46.9

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +++|+++||||+||||++++++|+++|+  +|++++|+.+.+++..      .. ...++.+|++|..++
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~------~~-~~~~~~~D~~d~~~~   78 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA------YK-NVNQEVVDFEKLDDY   78 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG------GG-GCEEEECCGGGGGGG
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc------cC-CceEEecCcCCHHHH
Confidence            5678999999999999999999999999  9999999876543211      01 245667888776544

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=98.63  E-value=8e-09  Score=81.07  Aligned_cols=41  Identities=24%  Similarity=0.407  Sum_probs=37.0

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      +...+++++++||||+|+||.+++++|+++|++|++++|+.
T Consensus        14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~   54 (330)
T 2pzm_A           14 LVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA   54 (330)
T ss_dssp             CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred             CcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence            44567889999999999999999999999999999999854

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=98.62  E-value=4e-08  Score=73.35  Aligned_cols=41  Identities=22%  Similarity=0.135  Sum_probs=36.6

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHC--CCEEEEEeCChHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKA--GDNVIICSRSAERVD  118 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~--Ga~V~i~~r~~~~~~  118 (147)
                      +++|+++|||++|+||.+++++|+++  |++|++++|+.+..+
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~   44 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE   44 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchh
Confidence            35679999999999999999999999  899999999876654

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=98.62  E-value=5.4e-08  Score=81.26  Aligned_cols=66  Identities=26%  Similarity=0.390  Sum_probs=53.0

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChH---HHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAE---RVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~---~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ..+++++||||++|||+++++.|+++|+ +|++++|+..   ..++..+++.+. +....++.+|++|..+
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~-g~~v~~~~~Dv~d~~~  293 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL-GARTTVAACDVTDRES  293 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT-TCEEEEEECCTTCHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc-CCEEEEEEeCCCCHHH
Confidence            4578999999999999999999999998 5999999875   355666666543 5556788899998654

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=98.62  E-value=5.8e-08  Score=85.51  Aligned_cols=67  Identities=25%  Similarity=0.341  Sum_probs=55.7

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHH-HCCC-EEEEEeCC---hHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFL-KAGD-NVIICSRS---AERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La-~~Ga-~V~i~~r~---~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      -.+|+++||||++|||+++++.|+ ++|+ +|++++|+   .+..++.++++.+. +....++.+|++|..++
T Consensus       528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~-G~~v~~~~~Dvsd~~~v  599 (795)
T 3slk_A          528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY-GAEVSLQACDVADRETL  599 (795)
T ss_dssp             CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT-TCEEEEEECCTTCHHHH
T ss_pred             ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc-CCcEEEEEeecCCHHHH
Confidence            368899999999999999999999 7998 59999998   45567777777654 56678889999986654

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=98.62  E-value=2.1e-08  Score=73.31  Aligned_cols=41  Identities=29%  Similarity=0.493  Sum_probs=35.7

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~  123 (147)
                      |+++|||+++|||++++++|+++  +|++++|+.+.+++..++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~   41 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELARE   41 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHH
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHh
Confidence            57999999999999999999998  999999998776655443

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.61  E-value=1.2e-07  Score=72.08  Aligned_cols=65  Identities=18%  Similarity=0.268  Sum_probs=52.4

Q ss_pred             CCCCCEEEEeCC----------------cChHHHHHHHHHHHCCCEEEEEeCCh-------------HHHHHHHHHHHHH
Q 032110           77 MLPPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSRSA-------------ERVDSAVQSLREE  127 (147)
Q Consensus        77 ~~~~k~~lVTG~----------------s~GIG~~~a~~La~~Ga~V~i~~r~~-------------~~~~~~~~~l~~~  127 (147)
                      ++.||+++||||                +||||+++|++|+++|++|++++++.             +..++..+++.+.
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~~~~g~~~~dv~~~~~~~~~v~~~   84 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNAS   84 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCCCTTEEEEECCSHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcccccCCCCeEEccCcHHHHHHHHHHh
Confidence            478999999999                59999999999999999999987642             1345666777777


Q ss_pred             hCCeEEEEEcccCC
Q 032110          128 FGEQHVVQNVMLAK  141 (147)
Q Consensus       128 ~~~~~~~~~~dv~~  141 (147)
                      ++..++++++....
T Consensus        85 ~~~~Dili~~Aav~   98 (226)
T 1u7z_A           85 VQQQNIFIGCAAVA   98 (226)
T ss_dssp             GGGCSEEEECCBCC
T ss_pred             cCCCCEEEECCccc
Confidence            88888888776543

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=98.61  E-value=1.4e-08  Score=76.24  Aligned_cols=41  Identities=17%  Similarity=0.190  Sum_probs=36.1

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVD  118 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~  118 (147)
                      +..|+++||||+||||.+++++|+++| ++|++++|++++++
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~   62 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIH   62 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSC
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhc
Confidence            345799999999999999999999999 89999999987543

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=98.60  E-value=8.1e-08  Score=80.73  Aligned_cols=66  Identities=27%  Similarity=0.360  Sum_probs=52.9

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChH---HHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAE---RVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~---~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ..+|+++||||++|||+++++.|+++|+ +|++++|+..   .+++..+++.+ .+....++.+|++|...
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~-~g~~v~~~~~Dvtd~~~  326 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRG-HGCEVVHAACDVAERDA  326 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHT-TTCEEEEEECCSSCHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHh-cCCEEEEEEeCCCCHHH
Confidence            3578999999999999999999999998 6999999874   35566666654 35556788899998654

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=98.57  E-value=5.4e-08  Score=76.31  Aligned_cols=64  Identities=19%  Similarity=0.225  Sum_probs=45.3

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH------HHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER------VDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~------~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      +|+++||||+|+||.+++++|+++|++|++++|+...      ..+..+++....+....++.+|++|..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~   71 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQG   71 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHH
Confidence            4689999999999999999999999999999885432      222233333322333456677777643

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=98.57  E-value=6.4e-08  Score=76.08  Aligned_cols=67  Identities=18%  Similarity=0.164  Sum_probs=49.1

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhC----CeEEEEEcccCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG----EQHVVQNVMLAKGM  143 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~----~~~~~~~~dv~~~~  143 (147)
                      .+.+|+++||||+|+||..+++.|+++|++|++++|+.....+...++....+    ....++.+|++|..
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   92 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLT   92 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHH
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHH
Confidence            35678999999999999999999999999999999976544333344433211    23456677777644

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=98.56  E-value=1.2e-07  Score=71.60  Aligned_cols=61  Identities=20%  Similarity=0.180  Sum_probs=45.6

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHH-CCCEEEEEeCChH-----------------HHHHHHHHHHHHhCCeEEEEEccc
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLK-AGDNVIICSRSAE-----------------RVDSAVQSLREEFGEQHVVQNVML  139 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~-~Ga~V~i~~r~~~-----------------~~~~~~~~l~~~~~~~~~~~~~dv  139 (147)
                      .++|+++|||+++|||++++++|++ .|++|++.+|+++                 ..++.++.+.  ++..++++++..
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~id~lv~nAg   79 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLKFIKADLTKQQDITNVLDIIK--NVSFDGIFLNAG   79 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTTEEEEECCTTCHHHHHHHHHHTT--TCCEEEEEECCC
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccccceEEecCcCCHHHHHHHHHHHH--hCCCCEEEECCc
Confidence            3578999999999999999999999 7899999888654                 2233332222  467788888766


Q ss_pred             C
Q 032110          140 A  140 (147)
Q Consensus       140 ~  140 (147)
                      .
T Consensus        80 ~   80 (244)
T 4e4y_A           80 I   80 (244)
T ss_dssp             C
T ss_pred             c
Confidence            5

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=98.55  E-value=3.8e-08  Score=71.41  Aligned_cols=38  Identities=24%  Similarity=0.340  Sum_probs=34.8

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~  117 (147)
                      +++++|||++|+||.+++++|+++|++|++++|+.+..
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~   40 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL   40 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhc
Confidence            46899999999999999999999999999999987653

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.54  E-value=1.2e-07  Score=77.31  Aligned_cols=69  Identities=20%  Similarity=0.092  Sum_probs=50.7

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHH-HCCCEEEEEeCChHHH-----------HHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFL-KAGDNVIICSRSAERV-----------DSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La-~~Ga~V~i~~r~~~~~-----------~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .+.+|+++|||+++|||++++.+|+ ..|+.++++.+..+..           .....+..++.+.....+++|+.+++.
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI  126 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence            4568999999999999999999999 6899998887754321           123333334446667888999988654


Q ss_pred             c
Q 032110          145 W  145 (147)
Q Consensus       145 ~  145 (147)
                      +
T Consensus       127 i  127 (401)
T 4ggo_A          127 K  127 (401)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=98.54  E-value=4.6e-08  Score=76.31  Aligned_cols=39  Identities=31%  Similarity=0.292  Sum_probs=34.6

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~  116 (147)
                      |++|+++||||+|+||.+++++|+++|++|++++|+.+.
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~   39 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGE   39 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCST
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcc
Confidence            357899999999999999999999999999999998654

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=98.54  E-value=1.8e-07  Score=75.94  Aligned_cols=69  Identities=16%  Similarity=0.026  Sum_probs=49.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH---HHHHHHHHHHHH--------hCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE---RVDSAVQSLREE--------FGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~---~~~~~~~~l~~~--------~~~~~~~~~~dv~~~~~~  145 (147)
                      ...+|+++||||+|+||.+++++|++.|++|++++|+.+   ..++..+++...        .+....++.+|+++...+
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            356779999999999999999999999999999999876   333333333222        234467889999985543

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=98.53  E-value=3.7e-07  Score=68.26  Aligned_cols=60  Identities=28%  Similarity=0.352  Sum_probs=45.3

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH----------HHHHHHHHHHh-CCeEEEEEcccC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV----------DSAVQSLREEF-GEQHVVQNVMLA  140 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~----------~~~~~~l~~~~-~~~~~~~~~dv~  140 (147)
                      |+++||||+||||++++++|+++|++|++++|+.+.+          .+.++++.+++ ++.++++++...
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~   72 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGVLDGLVCCAGV   72 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHHHHTTCCSEEEECCCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccccccCCcccHHHHHHHHHHcCCCccEEEECCCC
Confidence            5899999999999999999999999999999975321          12233333334 577888887654

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=98.52  E-value=1.9e-07  Score=73.04  Aligned_cols=64  Identities=17%  Similarity=0.183  Sum_probs=46.5

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH--HHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA--VQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~--~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +|+++||||+|+||.+++++|+++|++|+++.|+.+..++.  ..++. . .....++.+|++|..++
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~~Dl~d~~~~   74 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-E-LGDLKIFRADLTDELSF   74 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-G-GSCEEEEECCTTTSSSS
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-C-CCcEEEEecCCCChHHH
Confidence            67899999999999999999999999999988876532211  12222 1 22245677898886654

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=98.52  E-value=5.4e-07  Score=65.59  Aligned_cols=58  Identities=16%  Similarity=0.305  Sum_probs=43.6

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH------HHHHHHHHHHHHhCCeEEEEEcccC
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE------RVDSAVQSLREEFGEQHVVQNVMLA  140 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~------~~~~~~~~l~~~~~~~~~~~~~dv~  140 (147)
                      +++||||++|||+++++.|+ +|++|++++|+.+      .-.+.++++.+..+..++++++...
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~   68 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSGDVTVDITNIDSIKKMYEQVGKVDAIVSATGS   68 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSSSEECCTTCHHHHHHHHHHHCCEEEEEECCCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCccceeeecCCHHHHHHHHHHhCCCCEEEECCCC
Confidence            69999999999999999999 9999999998742      0112233333344778888887763

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=98.51  E-value=2e-07  Score=68.31  Aligned_cols=53  Identities=17%  Similarity=0.177  Sum_probs=42.6

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      +++||||+|+||.+++++|+++|++|++++|+.+++++..        ....++.+|++|.
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~~~~~~D~~d~   54 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--------KDINILQKDIFDL   54 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--------SSSEEEECCGGGC
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--------CCCeEEeccccCh
Confidence            5899999999999999999999999999999987655331        2245566777664

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=98.51  E-value=1.3e-07  Score=74.45  Aligned_cols=66  Identities=21%  Similarity=0.118  Sum_probs=46.7

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH----HHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE----RVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~----~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      +++++++||||+|+||..++++|+++|++|++++|+..    .+++..+++....+....++.+|++|..
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   94 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLD   94 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHH
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHH
Confidence            56789999999999999999999999999999999753    2333222221111123456678887644

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=98.50  E-value=3.2e-07  Score=67.57  Aligned_cols=54  Identities=17%  Similarity=0.211  Sum_probs=43.2

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      +++|||++|+||.+++++|+++|++|++++|+.+.+++..       +....++.+|++|.
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~~~~~~~D~~d~   55 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-------GATVATLVKEPLVL   55 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-------CTTSEEEECCGGGC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-------CCCceEEecccccc
Confidence            4899999999999999999999999999999987655331       22345667777764

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=98.50  E-value=2.8e-07  Score=72.06  Aligned_cols=65  Identities=22%  Similarity=0.231  Sum_probs=46.0

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhC---CeEEEEEcccCCCCCc
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG---EQHVVQNVMLAKGMKW  145 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~---~~~~~~~~dv~~~~~~  145 (147)
                      ++|+++||||+|+||.+++++|+++|++|+++.|+.+..++. ..+.. ..   ....++.+|++|..++
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~-~~~~~-~~~~~~~~~~~~~Dl~d~~~~   71 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKV-KHLLD-LPKAETHLTLWKADLADEGSF   71 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHH-HHHHT-STTHHHHEEEEECCTTSTTTT
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHH-HHHHh-cccCCCeEEEEEcCCCCHHHH
Confidence            578999999999999999999999999999999987643322 11111 11   1245677888876544

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=98.50  E-value=4.2e-08  Score=77.41  Aligned_cols=63  Identities=21%  Similarity=0.078  Sum_probs=44.6

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      +++++++||||+|+||.+++++|+++|++|++++|+.+..++..+++.  .+....++.+|+++.
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~   69 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR--VADGMQSEIGDIRDQ   69 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT--TTTTSEEEECCTTCH
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc--cCCceEEEEccccCH
Confidence            467899999999999999999999999999999997654332222221  112234455666553

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=98.48  E-value=3.2e-08  Score=78.40  Aligned_cols=40  Identities=25%  Similarity=0.326  Sum_probs=36.4

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHH--CCCEEEEEeCChH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLK--AGDNVIICSRSAE  115 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~--~Ga~V~i~~r~~~  115 (147)
                      +.+++++++||||+|+||.+++++|++  .|++|++++|+..
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~   47 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS   47 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence            457889999999999999999999999  9999999998653

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=98.46  E-value=7.2e-08  Score=75.66  Aligned_cols=42  Identities=19%  Similarity=0.135  Sum_probs=32.2

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      +....++|+++||||+|+||.++++.|+++|++|++++|+.+
T Consensus        13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~   54 (347)
T 4id9_A           13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS   54 (347)
T ss_dssp             --------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred             cccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence            445677889999999999999999999999999999999753

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=98.45  E-value=1.5e-07  Score=73.65  Aligned_cols=40  Identities=15%  Similarity=0.291  Sum_probs=36.0

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCC-------CEEEEEeCChH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAG-------DNVIICSRSAE  115 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~G-------a~V~i~~r~~~  115 (147)
                      ..+++++++||||+|+||.+++++|+++|       ++|++++|+.+
T Consensus        10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~   56 (342)
T 2hrz_A           10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQP   56 (342)
T ss_dssp             SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCC
T ss_pred             CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCC
Confidence            35678899999999999999999999999       89999998764

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=98.45  E-value=4e-08  Score=77.12  Aligned_cols=41  Identities=29%  Similarity=0.260  Sum_probs=33.3

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      +...+++++++||||+|+||.+++++|+++|++|++++|+.
T Consensus        15 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~   55 (333)
T 2q1w_A           15 VPRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFA   55 (333)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred             eeecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCC
Confidence            34456778999999999999999999999999999999864

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=98.44  E-value=1.7e-07  Score=80.76  Aligned_cols=67  Identities=18%  Similarity=0.173  Sum_probs=44.7

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      ..+++|+++||||+|+||.+++++|+++|++|++++|+.....+..+++....+....++.+|+++.
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~   73 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDR   73 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCH
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCH
Confidence            3467889999999999999999999999999999998754322222222221222344566777664

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.42  E-value=7.4e-07  Score=68.00  Aligned_cols=63  Identities=17%  Similarity=0.314  Sum_probs=50.8

Q ss_pred             CCCEEEEeCC----------------cChHHHHHHHHHHHCCCEEEEEeCChH---------------HHHHHHHHHHHH
Q 032110           79 PPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSRSAE---------------RVDSAVQSLREE  127 (147)
Q Consensus        79 ~~k~~lVTG~----------------s~GIG~~~a~~La~~Ga~V~i~~r~~~---------------~~~~~~~~l~~~  127 (147)
                      .||+++||||                +|++|+++|++|+++|++|+++++...               ..++..+.+.+.
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~~~~~~~~~~v~s~~em~~~v~~~   81 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPEPHPNLSIREITNTKDLLIEMQER   81 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCCCCTTEEEEECCSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCCCeEEEEHhHHHHHHHHHHHh
Confidence            4889999999                788999999999999999999987532               256677777778


Q ss_pred             hCCeEEEEEcccCC
Q 032110          128 FGEQHVVQNVMLAK  141 (147)
Q Consensus       128 ~~~~~~~~~~dv~~  141 (147)
                      ++..++++++....
T Consensus        82 ~~~~Dili~aAAvs   95 (232)
T 2gk4_A           82 VQDYQVLIHSMAVS   95 (232)
T ss_dssp             GGGCSEEEECSBCC
T ss_pred             cCCCCEEEEcCccc
Confidence            88888888766543

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=98.41  E-value=2.4e-07  Score=72.41  Aligned_cols=62  Identities=21%  Similarity=0.266  Sum_probs=41.9

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      +++||||+|+||.+++++|+++|++|++++|......+..+++....+....++.+|++|..
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~   63 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEA   63 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHH
Confidence            58999999999999999999999999998864321111122222222333455677777643

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=98.41  E-value=7.4e-07  Score=71.12  Aligned_cols=68  Identities=15%  Similarity=0.061  Sum_probs=46.1

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH----------------HHHHHHHHHhCCeEEEEEcccC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD----------------SAVQSLREEFGEQHVVQNVMLA  140 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~----------------~~~~~l~~~~~~~~~~~~~dv~  140 (147)
                      ..++..++||||+|.||.+++++|+++|++|++++|......                +...++....+....++.+|++
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~   87 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC   87 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCC
Confidence            346779999999999999999999999999999998754321                1222222222334566788888


Q ss_pred             CCCC
Q 032110          141 KGMK  144 (147)
Q Consensus       141 ~~~~  144 (147)
                      |...
T Consensus        88 d~~~   91 (404)
T 1i24_A           88 DFEF   91 (404)
T ss_dssp             SHHH
T ss_pred             CHHH
Confidence            7543

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=98.40  E-value=1.1e-07  Score=70.20  Aligned_cols=37  Identities=27%  Similarity=0.416  Sum_probs=34.0

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      +++||||+|+||.+++++|+++|++|++++|+.+..+
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~   38 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVP   38 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchh
Confidence            5899999999999999999999999999999986543

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=98.40  E-value=2.4e-07  Score=73.25  Aligned_cols=37  Identities=35%  Similarity=0.265  Sum_probs=31.4

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~  116 (147)
                      +|+++||||+|+||.+++++|+++|++|++++|+.+.
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   37 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASS   37 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcc
Confidence            3689999999999999999999999999999998654

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=98.39  E-value=5.2e-07  Score=70.41  Aligned_cols=62  Identities=19%  Similarity=0.220  Sum_probs=44.0

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~-~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      |+++||||+|+||.+++++|+++|++|++++|+. ...++..+++.. .+ ...++.+|++|...
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~-~~-~~~~~~~Dl~d~~~   64 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LG-NFEFVHGDIRNKND   64 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TC-CCEEEECCTTCHHH
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc-CC-ceEEEEcCCCCHHH
Confidence            4799999999999999999999999999999853 222222333332 12 24566788877543

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=98.38  E-value=2.4e-07  Score=73.00  Aligned_cols=62  Identities=23%  Similarity=0.289  Sum_probs=43.9

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh----HHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA----ERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~----~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      |..++++||||+|+||..++++|++.|++|++++|+.    ++.+ ..+++..   ....++.+|+.|..
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~l~~---~~v~~~~~Dl~d~~   73 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-IFKALED---KGAIIVYGLINEQE   73 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHHHHHH---TTCEEEECCTTCHH
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-HHHHHHh---CCcEEEEeecCCHH
Confidence            3456899999999999999999999999999999976    2322 1222322   22456677877643

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=98.37  E-value=1.2e-07  Score=70.07  Aligned_cols=37  Identities=27%  Similarity=0.417  Sum_probs=34.3

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~  117 (147)
                      ++++||||+|+||..+++.|+++|++|++++|+.+..
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   41 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI   41 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccc
Confidence            5899999999999999999999999999999987653

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=98.35  E-value=7.9e-07  Score=70.89  Aligned_cols=36  Identities=22%  Similarity=0.389  Sum_probs=32.8

Q ss_pred             CEEEEeCCcChHHHHHHHHHH-HCCCEEEEEeCChHH
Q 032110           81 YNVLITGSTKGIGYALAKEFL-KAGDNVIICSRSAER  116 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La-~~Ga~V~i~~r~~~~  116 (147)
                      ++++||||+|+||.+++++|+ ++|++|++++|+...
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~   39 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGT   39 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcc
Confidence            479999999999999999999 999999999987543

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=98.35  E-value=3.7e-07  Score=70.66  Aligned_cols=35  Identities=29%  Similarity=0.292  Sum_probs=32.1

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-Ch
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SA  114 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-~~  114 (147)
                      ||+++||||+|+||.+++++|+++|++|+++.| +.
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~   36 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADP   36 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC-
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCc
Confidence            578999999999999999999999999999988 65

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=98.33  E-value=4.5e-07  Score=69.88  Aligned_cols=64  Identities=19%  Similarity=0.177  Sum_probs=43.5

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH--HHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV--DSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~--~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      .++++||||+|+||.+++++|+++|++|++++|+....  .+..+.+.........++.+|+.|..
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~   69 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHA   69 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHH
Confidence            45799999999999999999999999999999984321  11111111111222456778877644

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=98.32  E-value=2e-06  Score=71.12  Aligned_cols=66  Identities=26%  Similarity=0.246  Sum_probs=50.0

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHC---CCEEEEEeCChHHHHHHHHHH---------------HHHhCCeEEEEEc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKA---GDNVIICSRSAERVDSAVQSL---------------REEFGEQHVVQNV  137 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~---Ga~V~i~~r~~~~~~~~~~~l---------------~~~~~~~~~~~~~  137 (147)
                      ...++|+++||||+|+||.+++++|++.   |++|++++|+.+..+ ..+++               .........++.+
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~  147 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDED-ARRRLEKTFDSGDPELLRHFKELAADRLEVVAG  147 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHH-HHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEEC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHH-HHHHHHHHHHhcchhhhhhhhhhccCceEEEEe
Confidence            4567899999999999999999999999   999999999875432 12222               2223345778899


Q ss_pred             ccCCC
Q 032110          138 MLAKG  142 (147)
Q Consensus       138 dv~~~  142 (147)
                      |+++.
T Consensus       148 Dl~~~  152 (478)
T 4dqv_A          148 DKSEP  152 (478)
T ss_dssp             CTTSG
T ss_pred             ECCCc
Confidence            99853

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=98.30  E-value=3e-07  Score=73.14  Aligned_cols=35  Identities=31%  Similarity=0.191  Sum_probs=32.9

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      |+++||||+|+||.++++.|+++|++|++++|+.+
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~   63 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSS   63 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCc
Confidence            68999999999999999999999999999998764

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=98.29  E-value=8.7e-07  Score=68.21  Aligned_cols=60  Identities=17%  Similarity=0.192  Sum_probs=45.0

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh-------HHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-------ERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~-------~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      +++++||||+|+||.+++++|+++|++|++++|+.       ++.+.. +++..  .+ ..++.+|+.|..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~--~~-v~~v~~D~~d~~   68 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS--LG-VILLEGDINDHE   68 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH--TT-CEEEECCTTCHH
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh--CC-CEEEEeCCCCHH
Confidence            45799999999999999999999999999999986       444332 33322  22 456778887754

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=98.28  E-value=3.8e-07  Score=72.40  Aligned_cols=35  Identities=34%  Similarity=0.254  Sum_probs=32.8

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      |+++||||+|+||.+++++|+++|++|++++|+.+
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   59 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSS   59 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCcc
Confidence            68999999999999999999999999999998754

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=98.27  E-value=7.5e-07  Score=68.92  Aligned_cols=36  Identities=31%  Similarity=0.397  Sum_probs=30.7

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      +|+++||||+|+||.+++++|+++|++|++++|+.+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   37 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRA   37 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCC
Confidence            568999999999999999999999999999998654

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=98.27  E-value=4.5e-07  Score=70.23  Aligned_cols=39  Identities=28%  Similarity=0.256  Sum_probs=32.9

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      ..+.++++||||+|+||.+++++|+++|++|++++|+.+
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~   47 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNE   47 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence            345679999999999999999999999999999998753

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=98.27  E-value=4.5e-07  Score=71.84  Aligned_cols=41  Identities=27%  Similarity=0.297  Sum_probs=35.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHC-CCEEEEEeCChHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERV  117 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~-Ga~V~i~~r~~~~~  117 (147)
                      .+.+++++||||+|+||..++++|+++ |++|++++|+.+..
T Consensus        21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~   62 (372)
T 3slg_A           21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRL   62 (372)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTT
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhh
Confidence            456789999999999999999999998 99999999986543

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=98.25  E-value=9.3e-07  Score=85.70  Aligned_cols=67  Identities=27%  Similarity=0.309  Sum_probs=51.7

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCE-EEEEeCChHHH---HHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERV---DSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~-V~i~~r~~~~~---~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      -.+|+++||||++|||+++++.|+++|++ |++++|+....   ++.++++... +....++.+|++|..++
T Consensus      1882 ~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~-g~~v~~~~~Dvsd~~~v 1952 (2512)
T 2vz8_A         1882 PPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ-GVQVLVSTSNASSLDGA 1952 (2512)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT-TCEEEEECCCSSSHHHH
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC-CCEEEEEecCCCCHHHH
Confidence            36899999999999999999999999997 88889986433   3444555443 55567788999886543

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=98.25  E-value=8.4e-07  Score=68.48  Aligned_cols=35  Identities=26%  Similarity=0.320  Sum_probs=32.5

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      .++++||||+|+||..++++|+++|++|++++|+.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~   38 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE   38 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCC
Confidence            35799999999999999999999999999999984

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=98.24  E-value=3.8e-07  Score=66.67  Aligned_cols=38  Identities=32%  Similarity=0.355  Sum_probs=34.4

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC--EEEEEeCChHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAER  116 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r~~~~  116 (147)
                      .+++++|||++|+||.++++.|+++|+  +|++++|+++.
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~   43 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA   43 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc
Confidence            357899999999999999999999998  99999998753

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.24  E-value=2e-06  Score=66.88  Aligned_cols=48  Identities=29%  Similarity=0.479  Sum_probs=42.8

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE  126 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~  126 (147)
                      ++.+|+++|+|++ |+|+++++.|++.| +|++++|+.+++++..+++..
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~  172 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAE  172 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhh
Confidence            5789999999986 99999999999999 999999999888887776643

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=98.24  E-value=7.3e-07  Score=68.77  Aligned_cols=56  Identities=16%  Similarity=0.202  Sum_probs=41.3

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      ++++||||+|+||.+++++|+++|++|++++|+.+...+..       .....++.+|+.|..
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~Dl~d~~   56 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-------NPSAELHVRDLKDYS   56 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-------CTTSEEECCCTTSTT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-------CCCceEEECccccHH
Confidence            36999999999999999999999999999998765432211       222345566666543

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=98.22  E-value=1.9e-06  Score=66.92  Aligned_cols=60  Identities=15%  Similarity=0.130  Sum_probs=43.8

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh-H----HHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-E----RVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~-~----~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      ++++|||++|+||.+++++|+++|++|++++|+. +    ...+...++..  .+ ..++.+|+.|..
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~--~~-v~~v~~D~~d~~   69 (321)
T 3c1o_A            5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS--MG-VTIIEGEMEEHE   69 (321)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH--TT-CEEEECCTTCHH
T ss_pred             cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc--CC-cEEEEecCCCHH
Confidence            4799999999999999999999999999999986 1    22222223322  22 456778887754

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=98.22  E-value=5.2e-07  Score=70.29  Aligned_cols=38  Identities=29%  Similarity=0.166  Sum_probs=33.0

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      -.++.++||||+|+||.+++++|+++|++|++++|+.+
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~   49 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRS   49 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCc
Confidence            34668999999999999999999999999999999764

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=98.21  E-value=1.1e-06  Score=68.24  Aligned_cols=60  Identities=20%  Similarity=0.246  Sum_probs=44.0

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      |+++|||++|+||.+++++|+++|++|++++|+.+...+..+++..  .+ ..++.+|+.|..
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~--~~-v~~v~~Dl~d~~   71 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS--LG-AIIVKGELDEHE   71 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH--TT-CEEEECCTTCHH
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc--CC-CEEEEecCCCHH
Confidence            5799999999999999999999999999999987522222233322  22 456778877644

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=98.20  E-value=8.5e-07  Score=69.56  Aligned_cols=40  Identities=20%  Similarity=0.258  Sum_probs=33.6

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      ..+++++++||||+|+||..++++|+++|++|++++|+..
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   62 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT   62 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence            4467789999999999999999999999999999998643

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=98.19  E-value=2.2e-06  Score=65.92  Aligned_cols=60  Identities=20%  Similarity=0.212  Sum_probs=44.7

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +|+++|||++|+||.+++++|+++| ++|++++|+.+....  +++..  .+ ..++.+|+.|..+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~--~~-~~~~~~D~~d~~~   65 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL--QG-AEVVQGDQDDQVI   65 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH--TT-CEEEECCTTCHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH--CC-CEEEEecCCCHHH
Confidence            4689999999999999999999999 999999998765421  22222  22 3456777776443

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.18  E-value=1.1e-05  Score=53.35  Aligned_cols=40  Identities=15%  Similarity=0.272  Sum_probs=35.8

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSA  120 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~  120 (147)
                      ++.++|+|+ |++|..+++.|.+.| ++|++++|++++.+..
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~   45 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVL   45 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHH
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHH
Confidence            457999999 999999999999999 8999999998876654

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=98.16  E-value=1.1e-06  Score=70.23  Aligned_cols=37  Identities=22%  Similarity=0.268  Sum_probs=34.0

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      .+++++||||+|+||..++++|+++|++|++++|+.+
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   64 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKN   64 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCc
Confidence            4578999999999999999999999999999999754

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=98.16  E-value=6.4e-07  Score=71.41  Aligned_cols=38  Identities=26%  Similarity=0.427  Sum_probs=35.0

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAE  115 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~  115 (147)
                      +++++++||||+|+||..++++|+++| ++|++++|+.+
T Consensus        30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   68 (377)
T 2q1s_A           30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLS   68 (377)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTT
T ss_pred             hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCC
Confidence            567899999999999999999999999 99999999754

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=98.14  E-value=2.5e-06  Score=67.93  Aligned_cols=61  Identities=15%  Similarity=0.101  Sum_probs=45.3

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcc-cCCCC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVM-LAKGM  143 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~d-v~~~~  143 (147)
                      .+++++|||++|+||..+++.|+++|++|++++|+.+...  .+++.. .++ ..++.+| ++|..
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~-~~~-v~~v~~D~l~d~~   65 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA-IPN-VTLFQGPLLNNVP   65 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT-STT-EEEEESCCTTCHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh-cCC-cEEEECCccCCHH
Confidence            4578999999999999999999999999999999876542  122221 122 4566788 77644

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.13  E-value=1.8e-05  Score=62.73  Aligned_cols=53  Identities=15%  Similarity=0.199  Sum_probs=45.8

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC---hHHHHHHHHHHHHHhC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS---AERVDSAVQSLREEFG  129 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~---~~~~~~~~~~l~~~~~  129 (147)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+   .++++++++++...++
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~  206 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD  206 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC
Confidence            4578999999996 7999999999999998 89999999   8888888777765543

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=98.12  E-value=1.1e-06  Score=67.02  Aligned_cols=55  Identities=18%  Similarity=0.321  Sum_probs=41.4

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKA--GDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~--Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      |+++||||+|+||..++++|+++  |++|++++|+.+..++..    .  .+ ..++.+|++|.
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~--~~-~~~~~~D~~d~   57 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D--QG-VEVRHGDYNQP   57 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H--TT-CEEEECCTTCH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h--cC-CeEEEeccCCH
Confidence            46899999999999999999999  999999999876544321    1  11 33556666654

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=98.11  E-value=3.2e-06  Score=64.64  Aligned_cols=54  Identities=20%  Similarity=0.225  Sum_probs=41.7

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++++++||| +|+||..++++|+++|++|++++|+.+.+           .....++.+|++|...
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----------~~~~~~~~~Dl~d~~~   55 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-----------PAGVQTLIADVTRPDT   55 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-----------CTTCCEEECCTTCGGG
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------ccCCceEEccCCChHH
Confidence            456899999 59999999999999999999999987542           1223456677776544

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=98.10  E-value=7.5e-07  Score=69.40  Aligned_cols=36  Identities=22%  Similarity=0.244  Sum_probs=31.5

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCC--CEEEEEeCCh
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSA  114 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~~  114 (147)
                      ++++++||||+|+||.+++++|+++|  ++|++++|+.
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~   39 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLG   39 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCC
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCc
Confidence            34579999999999999999999997  8999999863

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=98.10  E-value=1.6e-06  Score=67.59  Aligned_cols=36  Identities=19%  Similarity=0.397  Sum_probs=33.2

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~  117 (147)
                      +++||||+|+||.+++++|+++|++|++++|+.+..
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   50 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQI   50 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCG
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhh
Confidence            799999999999999999999999999999986543

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=98.07  E-value=5.2e-06  Score=68.92  Aligned_cols=67  Identities=18%  Similarity=0.057  Sum_probs=50.1

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH---HHHHHHHHH--------HHhCCeEEEEEcccCCCCCc
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER---VDSAVQSLR--------EEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~---~~~~~~~l~--------~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ..++++||||+|+||..++++|.+.|++|++++|+...   .++..+.+.        ........++.+|+.+...+
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  226 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  226 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSC
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccC
Confidence            34689999999999999999999999999999998763   223323222        22344577889999985543

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=98.07  E-value=6.2e-07  Score=70.24  Aligned_cols=39  Identities=21%  Similarity=0.167  Sum_probs=30.9

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCC--CEEEEEeCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRS  113 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~  113 (147)
                      .+.+++++++||||+|+||.+++++|+++|  ++|++.+|.
T Consensus        19 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~   59 (346)
T 4egb_A           19 YFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDAL   59 (346)
T ss_dssp             -----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECC
T ss_pred             ccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecc
Confidence            345678899999999999999999999999  678777764

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=98.06  E-value=2.2e-06  Score=66.62  Aligned_cols=34  Identities=24%  Similarity=0.390  Sum_probs=31.5

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      ++++||||+|+||.+++++|+++|++|++++|+.
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   35 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQ   35 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCC
Confidence            4799999999999999999999999999998854

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=98.06  E-value=1.6e-05  Score=61.34  Aligned_cols=59  Identities=19%  Similarity=0.306  Sum_probs=42.5

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH-----------HHHHHHHhCCeEEEEEcccC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA-----------VQSLREEFGEQHVVQNVMLA  140 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~-----------~~~l~~~~~~~~~~~~~dv~  140 (147)
                      ++++||||+|+||..++++|+++|++|++++|+....+ .           .+.+.+...+.++++++...
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~~   72 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-INDYEYRVSDYTLEDLINQLNDVDAVVHLAAT   72 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------CCEEEECCCCHHHHHHHTTTCSEEEECCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CCceEEEEccccHHHHHHhhcCCCEEEEcccc
Confidence            68999999999999999999999999999999843322 1           23333344455666666543

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=98.06  E-value=4.9e-06  Score=64.78  Aligned_cols=37  Identities=24%  Similarity=0.285  Sum_probs=33.4

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHC-CCEEEEEeCChHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERV  117 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~-Ga~V~i~~r~~~~~  117 (147)
                      ++++||||+|+||.+++++|+++ |++|++++|+.+..
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~   38 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAI   38 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGG
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchH
Confidence            36899999999999999999998 89999999987654

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.01  E-value=1.4e-05  Score=61.58  Aligned_cols=48  Identities=19%  Similarity=0.335  Sum_probs=42.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR  125 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~  125 (147)
                      .+.+|+++|+|+ ||+|+++++.|++.|++|++++|+.++++++.+++.
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~  163 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFA  163 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTG
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhh
Confidence            567899999997 799999999999999999999999988887766653

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=98.01  E-value=2.7e-06  Score=65.06  Aligned_cols=36  Identities=28%  Similarity=0.471  Sum_probs=33.0

Q ss_pred             EEEEeCCcChHHHHHHHHHHHC-CCEEEEEeCChHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERV  117 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~-Ga~V~i~~r~~~~~  117 (147)
                      +++|||++|+||..+++.|.+. |++|++++|+.++.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~   38 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKV   38 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGS
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHH
Confidence            4899999999999999999998 89999999988654

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=98.00  E-value=2.7e-06  Score=64.64  Aligned_cols=53  Identities=15%  Similarity=0.291  Sum_probs=40.0

Q ss_pred             EEEeCCcChHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           83 VLITGSTKGIGYALAKEFLKA--GDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~--Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      ++||||+|+||.+++++|+++  |++|++++|+.+..++..    .  .+ ..++.+|++|.
T Consensus         2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~--~~-~~~~~~D~~d~   56 (286)
T 2zcu_A            2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A--QG-ITVRQADYGDE   56 (286)
T ss_dssp             EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H--TT-CEEEECCTTCH
T ss_pred             EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c--CC-CeEEEcCCCCH
Confidence            799999999999999999998  999999999876543321    1  11 33556666654

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.00  E-value=3.2e-05  Score=60.39  Aligned_cols=51  Identities=16%  Similarity=0.273  Sum_probs=45.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHHHh
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEF  128 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~l~~~~  128 (147)
                      .+++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++++++...+
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~  175 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAV  175 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhc
Confidence            578999999997 8999999999999998 79999999999988888776654

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=98.00  E-value=1.3e-05  Score=61.19  Aligned_cols=61  Identities=23%  Similarity=0.250  Sum_probs=42.2

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH--HHHHHHHHHhCCeEEEEEcccC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD--SAVQSLREEFGEQHVVQNVMLA  140 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~--~~~~~l~~~~~~~~~~~~~dv~  140 (147)
                      ..++++||||+|+||.+++++|+++|++|++++|+...+.  +.++++.+.. +.++++++...
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~Dl~d~~~~~~~~~~~-~~d~vih~A~~   73 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEK-KPNVVINCAAH   73 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHHHH-CCSEEEECCCC
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCccCCCCCHHHHHHHHHhc-CCCEEEECCcc
Confidence            4568999999999999999999999999999988632211  1122222221 45677776654

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=97.98  E-value=6.5e-06  Score=63.35  Aligned_cols=38  Identities=26%  Similarity=0.338  Sum_probs=33.8

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      +.+++++||||+|+||..++++|+++|++|++++|+..
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   42 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV   42 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence            45679999999999999999999999999999999764

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=97.98  E-value=4.1e-06  Score=64.75  Aligned_cols=35  Identities=20%  Similarity=0.361  Sum_probs=31.8

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      .+++++||||+|+||..++++|+++|++|++++|+
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~   36 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR   36 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecC
Confidence            35689999999999999999999999999998775

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=97.97  E-value=2.6e-05  Score=59.32  Aligned_cols=53  Identities=13%  Similarity=0.043  Sum_probs=41.9

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAK  141 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~  141 (147)
                      ++++|||+ |.||..++++|+++|++|++++|+.+..+....      .+ ..++.+|+.|
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~-~~~~~~D~~d   58 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA------SG-AEPLLWPGEE   58 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH------TT-EEEEESSSSC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh------CC-CeEEEecccc
Confidence            57999998 999999999999999999999999876544321      22 4556677765

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.96  E-value=1.2e-05  Score=58.52  Aligned_cols=41  Identities=24%  Similarity=0.308  Sum_probs=36.8

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      .|++++|+|+++|||+++++.+...|++|+++++++++.+.
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~   78 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM   78 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            57899999999999999999999999999999998876543

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=97.94  E-value=1.6e-06  Score=67.04  Aligned_cols=32  Identities=28%  Similarity=0.425  Sum_probs=30.2

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      +++||||+|+||.+++++|+++|++|++++|.
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~   33 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNL   33 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCC
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            58999999999999999999999999999884

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=97.93  E-value=7.6e-06  Score=64.44  Aligned_cols=39  Identities=15%  Similarity=0.330  Sum_probs=31.7

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAE  115 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~  115 (147)
                      .+++++++||||+|+||.+++++|+++| ++|++++|+..
T Consensus        43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   82 (357)
T 2x6t_A           43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD   82 (357)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSS
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCC
Confidence            4567889999999999999999999999 99999998653

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=97.93  E-value=3e-06  Score=66.26  Aligned_cols=34  Identities=18%  Similarity=0.276  Sum_probs=31.6

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHC--CCEEEEEeCCh
Q 032110           81 YNVLITGSTKGIGYALAKEFLKA--GDNVIICSRSA  114 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~--Ga~V~i~~r~~  114 (147)
                      |+++||||+|+||.+++++|+++  |++|++++|+.
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~   40 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLT   40 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCC
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence            58999999999999999999999  89999999864

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.92  E-value=7.9e-05  Score=58.99  Aligned_cols=53  Identities=13%  Similarity=0.175  Sum_probs=45.7

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC---hHHHHHHHHHHHHHhC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS---AERVDSAVQSLREEFG  129 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~---~~~~~~~~~~l~~~~~  129 (147)
                      .++.+|.++|+|+ ||.|++++..|++.|+ +|+++.|+   .++++++++++...++
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~  200 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTD  200 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSS
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccC
Confidence            4578999999996 8999999999999998 89999999   8888888877766544

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=97.92  E-value=2.3e-05  Score=63.83  Aligned_cols=62  Identities=18%  Similarity=0.209  Sum_probs=49.9

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCC---CEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAG---DNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~G---a~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      +.++|+|+ ||||..+++.|++.|   .+|++++|+.+++++..+++....+.....+.+|+++..
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~   66 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIE   66 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHH
Confidence            46888998 899999999999998   489999999999988888876543334556778887643

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=97.92  E-value=6.7e-07  Score=67.89  Aligned_cols=35  Identities=20%  Similarity=0.311  Sum_probs=32.6

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      |+++|||++|+||.+++++|+++|++|++++|+.+
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   37 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDL   37 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCC
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCc
Confidence            57999999999999999999999999999998764

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=97.91  E-value=1.9e-05  Score=60.16  Aligned_cols=58  Identities=21%  Similarity=0.317  Sum_probs=40.8

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH--HHHHHHHHHhCCeEEEEEcccC
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD--SAVQSLREEFGEQHVVQNVMLA  140 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~--~~~~~l~~~~~~~~~~~~~dv~  140 (147)
                      +++||||+|+||.++++.|+++|++|++++|....+.  +.+.++.+.. +.++++++...
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~D~~d~~~~~~~~~~~-~~d~vi~~a~~   66 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEI-RPHIIIHCAAY   66 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTTTSCTTCHHHHHHHHHHH-CCSEEEECCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEecccccCCCCHHHHHHHHHhc-CCCEEEECCcc
Confidence            7999999999999999999999999999988442211  1222222222 34667776543

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=97.89  E-value=2.6e-06  Score=66.93  Aligned_cols=36  Identities=31%  Similarity=0.211  Sum_probs=32.7

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCC-----CEEEEEeCChH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAG-----DNVIICSRSAE  115 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~G-----a~V~i~~r~~~  115 (147)
                      +++++||||+|+||..++++|+++|     ++|++++|+..
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~   41 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTR   41 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCC
Confidence            4579999999999999999999999     99999998753

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=97.89  E-value=6.6e-06  Score=63.56  Aligned_cols=34  Identities=21%  Similarity=0.298  Sum_probs=27.8

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      |+++||||+|+||.+++++|+++|..|++..++.
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~   35 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSS   35 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSS
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCC
Confidence            4799999999999999999999996555554443

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=97.86  E-value=4.6e-06  Score=64.14  Aligned_cols=37  Identities=27%  Similarity=0.337  Sum_probs=32.9

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHC--CCEEEEEeCChHH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKA--GDNVIICSRSAER  116 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~--Ga~V~i~~r~~~~  116 (147)
                      +++++||||+|+||.+++++|+++  |++|++++|+...
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~   40 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLN   40 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCS
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcc
Confidence            367999999999999999999998  8999999987543

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=97.85  E-value=1.3e-05  Score=61.63  Aligned_cols=59  Identities=24%  Similarity=0.221  Sum_probs=43.1

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH-HHHhCCeEEEEEcccC
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL-REEFGEQHVVQNVMLA  140 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l-~~~~~~~~~~~~~dv~  140 (147)
                      +++||||+|.||..++++|.++|++|+++.|++...+-...++ .+...+.+.++++...
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~l~~~d~vihla~~   61 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGRITWDELAASGLPSCDAAVNLAGE   61 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTEEEHHHHHHHCCCSCSEEEECCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcCeeecchhhHhhccCCCEEEEeccC
Confidence            4899999999999999999999999999999765321111121 2234566778887643

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=97.85  E-value=1.2e-05  Score=68.88  Aligned_cols=39  Identities=23%  Similarity=0.196  Sum_probs=34.9

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHC-CCEEEEEeCChHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAER  116 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~-Ga~V~i~~r~~~~  116 (147)
                      +++++++||||+|+||.+++++|+++ |++|++++|+.+.
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~  352 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDA  352 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTT
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchh
Confidence            56789999999999999999999998 8999999998654

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.83  E-value=2.6e-05  Score=53.70  Aligned_cols=56  Identities=23%  Similarity=0.379  Sum_probs=42.4

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      .++.++|+|+ |.+|..+++.|.++|++|++++++++..++..+    . +  ..++..|.+++
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~-~--~~~~~gd~~~~   60 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----E-G--FDAVIADPTDE   60 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T-T--CEEEECCTTCH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C-C--CcEEECCCCCH
Confidence            3457999997 789999999999999999999999877655432    1 2  24556777664

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=97.82  E-value=4.4e-06  Score=65.64  Aligned_cols=33  Identities=30%  Similarity=0.476  Sum_probs=30.2

Q ss_pred             EEEEeCCcChHHHHHHHHHHHC-CCEEEEEeCCh
Q 032110           82 NVLITGSTKGIGYALAKEFLKA-GDNVIICSRSA  114 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~-Ga~V~i~~r~~  114 (147)
                      +++||||+|+||.++++.|+++ |++|++++|+.
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~   35 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLT   35 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCC
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCC
Confidence            4899999999999999999998 79999999864

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.82  E-value=1.7e-05  Score=66.69  Aligned_cols=47  Identities=30%  Similarity=0.425  Sum_probs=37.1

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l  124 (147)
                      .+.+|+++|||+ ||+|+++++.|++.|++|++++|+.+++++..+++
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~  407 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI  407 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc
Confidence            467889999998 59999999999999999999999998888776654

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.82  E-value=6.4e-05  Score=58.62  Aligned_cols=50  Identities=14%  Similarity=0.309  Sum_probs=44.0

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLRE  126 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~l~~  126 (147)
                      .++.+|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++++++..
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~  172 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAA  172 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGG
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhc
Confidence            3578999999996 7999999999999996 999999999998888777653

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.81  E-value=4.1e-05  Score=64.07  Aligned_cols=46  Identities=20%  Similarity=0.215  Sum_probs=40.1

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ  122 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~  122 (147)
                      .++.||+++|||++ +||+++++.|+..|++|+++++++...+++..
T Consensus       261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~  306 (488)
T 3ond_A          261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATM  306 (488)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            35899999999976 99999999999999999999999877665443

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.80  E-value=4.7e-05  Score=58.75  Aligned_cols=48  Identities=21%  Similarity=0.418  Sum_probs=43.0

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR  125 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~  125 (147)
                      .+.+|+++|+|+ ||+|++++..|++.|++|++++|+.+++++..+++.
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~  163 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQ  163 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHG
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcc
Confidence            567899999997 899999999999999999999999998888777664

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.79  E-value=4.7e-05  Score=59.74  Aligned_cols=43  Identities=16%  Similarity=0.179  Sum_probs=38.4

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      ..|++++|+|+++|||+.+++.+...|++|+++++++++++.+
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~  186 (333)
T 1v3u_A          144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL  186 (333)
T ss_dssp             CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            3578999999999999999999999999999999998776544

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=97.77  E-value=6.6e-05  Score=56.49  Aligned_cols=32  Identities=28%  Similarity=0.405  Sum_probs=29.3

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      +++||||+|+||.+++++|+ +|++|++++|+.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~   33 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSS   33 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSS
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCC
Confidence            58999999999999999999 589999999865

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=97.75  E-value=2.3e-05  Score=61.04  Aligned_cols=33  Identities=27%  Similarity=0.476  Sum_probs=30.3

Q ss_pred             EEEEeCCcChHHHHHHHHHHHC---C---CEEEEEeCCh
Q 032110           82 NVLITGSTKGIGYALAKEFLKA---G---DNVIICSRSA  114 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~---G---a~V~i~~r~~  114 (147)
                      +++||||+|+||.+++++|+++   |   ++|++++|+.
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~   40 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLT   40 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCC
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCC
Confidence            5899999999999999999997   8   9999999853

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.72  E-value=0.00011  Score=56.96  Aligned_cols=49  Identities=24%  Similarity=0.323  Sum_probs=43.1

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLR  125 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~l~  125 (147)
                      .++.+|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++++++.
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~  165 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELD  165 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHC
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence            3578999999996 7999999999999995 99999999999888877664

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=97.70  E-value=7.5e-05  Score=59.07  Aligned_cols=52  Identities=21%  Similarity=0.364  Sum_probs=39.7

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCC-EEEEEeC--ChHHHHHHHHHHHHHhCCeEEEEEcccC
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGD-NVIICSR--SAERVDSAVQSLREEFGEQHVVQNVMLA  140 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r--~~~~~~~~~~~l~~~~~~~~~~~~~dv~  140 (147)
                      +++||||+|+||..++++|+++|+ +|+.++|  +.+.++++++       +.++++++...
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~~d~~~l~~~~~-------~~d~Vih~a~~   56 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEELESALL-------KADFIVHLAGV   56 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTTCCHHHHHHHHH-------HCSEEEECCCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHhc-------cCCEEEECCcC
Confidence            589999999999999999999998 9999999  3334443332       24567776543

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=97.63  E-value=8.1e-06  Score=62.97  Aligned_cols=32  Identities=31%  Similarity=0.405  Sum_probs=29.4

Q ss_pred             EEEeCCcChHHHHHHHHHHHC--CCEEEEEeCCh
Q 032110           83 VLITGSTKGIGYALAKEFLKA--GDNVIICSRSA  114 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~--Ga~V~i~~r~~  114 (147)
                      ++||||+|+||.+++++|+++  |++|++++|+.
T Consensus         2 vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~   35 (317)
T 3ajr_A            2 ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQ   35 (317)
T ss_dssp             EEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSC
T ss_pred             EEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCC
Confidence            799999999999999999998  89999988754

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.63  E-value=9.2e-05  Score=58.12  Aligned_cols=43  Identities=19%  Similarity=0.158  Sum_probs=38.7

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      -.|++++|+|+++|||..+++.+...|++|+++++++++++.+
T Consensus       148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  190 (336)
T 4b7c_A          148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFL  190 (336)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            3588999999999999999999999999999999998876655

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=97.62  E-value=0.00014  Score=55.41  Aligned_cols=32  Identities=25%  Similarity=0.456  Sum_probs=29.9

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      +++||||+|+||..++++|+ +|++|++++|+.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~   33 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHS   33 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTC
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEecccc
Confidence            58999999999999999999 899999999864

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=97.61  E-value=3.2e-05  Score=63.96  Aligned_cols=41  Identities=17%  Similarity=0.217  Sum_probs=36.1

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      ++|.++|+| +||+|+++++.|++.|++|++++|+.++.++.
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~l   42 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKL   42 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHH
Confidence            467899997 89999999999999999999999998776544

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.61  E-value=0.00024  Score=55.58  Aligned_cols=46  Identities=17%  Similarity=0.319  Sum_probs=40.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQS  123 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~  123 (147)
                      .+.+|+++|.|+ ||+|++++..|++.|+ +|++++|+.+++++++++
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~  184 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVRE  184 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHH
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            567899999996 8999999999999997 999999999887766544

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.60  E-value=0.00011  Score=57.47  Aligned_cols=42  Identities=21%  Similarity=0.292  Sum_probs=37.8

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .|++++|+|+++|||+.+++.+...|++|+++++++++++.+
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~  181 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSA  181 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999999998766543

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=97.59  E-value=8.2e-05  Score=62.00  Aligned_cols=37  Identities=35%  Similarity=0.496  Sum_probs=34.1

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~  116 (147)
                      +++++||||+|+||..+++.|+++|++|++++|+...
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~  183 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPK  183 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence            5689999999999999999999999999999998653

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.58  E-value=0.00012  Score=57.38  Aligned_cols=43  Identities=26%  Similarity=0.312  Sum_probs=38.2

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      ..+++++|+|+++|||+.+++.+...|++|+++++++++++.+
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~  186 (333)
T 1wly_A          144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETA  186 (333)
T ss_dssp             CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            3578999999999999999999999999999999998766543

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.55  E-value=0.00019  Score=57.00  Aligned_cols=42  Identities=24%  Similarity=0.257  Sum_probs=38.0

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .|++++|+|+++|||..+++.+...|++|+++++++++++.+
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  203 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA  203 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999999998776544

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.55  E-value=0.00013  Score=57.43  Aligned_cols=43  Identities=19%  Similarity=0.176  Sum_probs=38.3

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      ..|++++|+|++||+|..+++.+...|++|+++++++++++.+
T Consensus       154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~  196 (345)
T 2j3h_A          154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLL  196 (345)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            3578999999999999999999999999999999998776544

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.54  E-value=0.00011  Score=49.96  Aligned_cols=40  Identities=20%  Similarity=0.371  Sum_probs=34.2

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      ++++.++|+|+ |++|..+++.|.+.|++|++++++++..+
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~   43 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVN   43 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHH
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            45677999997 99999999999999999999999876654

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.54  E-value=0.0002  Score=56.55  Aligned_cols=41  Identities=17%  Similarity=0.189  Sum_probs=37.1

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      ..|++++|+|+++|||+.+++.+...|++|+++++++++++
T Consensus       168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~  208 (347)
T 2hcy_A          168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEE  208 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHH
Confidence            35789999999999999999999999999999999887764

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.50  E-value=0.00022  Score=56.49  Aligned_cols=42  Identities=12%  Similarity=0.055  Sum_probs=37.6

Q ss_pred             CC--CEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHH
Q 032110           79 PP--YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~--k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~  120 (147)
                      .|  ++++|+|++||||+.+++.+...|+ +|+++++++++.+.+
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~  202 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILL  202 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHH
Confidence            46  8999999999999999999999999 999999998776544

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.50  E-value=0.00027  Score=56.10  Aligned_cols=40  Identities=20%  Similarity=0.272  Sum_probs=37.0

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      .|++++|+|++||+|..+++.+...|++|+++++++++++
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~  209 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK  209 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHH
Confidence            5789999999999999999999999999999999987765

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.43  E-value=0.0004  Score=55.68  Aligned_cols=43  Identities=28%  Similarity=0.336  Sum_probs=38.4

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .+.+++++|+|+ |+||+.+++.+...|++|+++++++++++.+
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~  205 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYL  205 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence            467899999998 9999999999999999999999998776544

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=97.42  E-value=0.00011  Score=56.07  Aligned_cols=33  Identities=18%  Similarity=0.458  Sum_probs=30.6

Q ss_pred             EEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChH
Q 032110           83 VLITGSTKGIGYALAKEFLKAG-DNVIICSRSAE  115 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~  115 (147)
                      ++||||+|+||.+++++|+++| ++|++++|+..
T Consensus         2 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   35 (310)
T 1eq2_A            2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD   35 (310)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSS
T ss_pred             EEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCC
Confidence            7999999999999999999999 89999998654

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.41  E-value=0.00044  Score=48.27  Aligned_cols=58  Identities=14%  Similarity=0.165  Sum_probs=40.6

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~-~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      .+.++|.| .|.+|..+++.|.+.|++|++++++. +..++..+.    ......++..|.++.
T Consensus         3 ~~~vlI~G-~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~----~~~~~~~i~gd~~~~   61 (153)
T 1id1_A            3 KDHFIVCG-HSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQR----LGDNADVIPGDSNDS   61 (153)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHH----HCTTCEEEESCTTSH
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHh----hcCCCeEEEcCCCCH
Confidence            45678888 49999999999999999999999974 444333222    222244566776654

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.39  E-value=0.00038  Score=55.16  Aligned_cols=42  Identities=26%  Similarity=0.318  Sum_probs=38.0

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .|++++|+||++|+|..+++.+...|++|+++++++++++.+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  208 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEAC  208 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999999998876543

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.37  E-value=0.00039  Score=54.87  Aligned_cols=42  Identities=24%  Similarity=0.376  Sum_probs=37.5

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHC-CCEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~-Ga~V~i~~r~~~~~~~~  120 (147)
                      .+++++|+|+++|+|+.+++.+... |++|+++++++++++.+
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~  212 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA  212 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            6789999999999999999999998 99999999998776544

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.30  E-value=0.00053  Score=53.72  Aligned_cols=41  Identities=20%  Similarity=0.310  Sum_probs=37.3

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      -.|++++|+|+++|+|..+++.+...|++|+++++++++++
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~  187 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLK  187 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            35789999999999999999999999999999999887765

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.29  E-value=0.00053  Score=53.98  Aligned_cols=42  Identities=24%  Similarity=0.314  Sum_probs=37.8

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .+++++|+|+++|+|+.+++.+...|++|+++++++++++.+
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~  207 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRA  207 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999999998776544

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.27  E-value=0.00052  Score=53.66  Aligned_cols=42  Identities=21%  Similarity=0.245  Sum_probs=37.8

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .|++++|+|++|++|+.+++.+...|++|+++++++++++.+
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  181 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHA  181 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999999998776543

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.25  E-value=0.00018  Score=55.92  Aligned_cols=60  Identities=18%  Similarity=0.309  Sum_probs=45.1

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHH--------HHHHHHHhCCeEEEEEc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSA--------VQSLREEFGEQHVVQNV  137 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~--------~~~l~~~~~~~~~~~~~  137 (147)
                      ++.+|+++|.|+ ||+|++++..|++.|+ +|++++|+.++.+++        .+++.+.....++++++
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVIna  182 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINT  182 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEEC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEEC
Confidence            467899999995 8999999999999998 899999998776543        23333323444666654

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.24  E-value=0.00067  Score=53.49  Aligned_cols=41  Identities=24%  Similarity=0.277  Sum_probs=37.2

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      .|++++|+|++||+|..+++.+...|++|+++++++++.+.
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~  199 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEF  199 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            57899999999999999999999999999999998877643

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.19  E-value=0.0014  Score=44.20  Aligned_cols=39  Identities=23%  Similarity=0.503  Sum_probs=33.4

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      +.++|+|+ |.+|..+++.|.+.|++|++++++++..++.
T Consensus         5 m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~   43 (140)
T 1lss_A            5 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKA   43 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence            46888885 9999999999999999999999998765543

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.18  E-value=0.00062  Score=56.57  Aligned_cols=45  Identities=18%  Similarity=0.154  Sum_probs=36.3

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHC-CCEEEEEeCChHHHHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAV  121 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~-Ga~V~i~~r~~~~~~~~~  121 (147)
                      ..++++.++|+|+ ||+|+++++.|++. |++|++++|+.+++++..
T Consensus        19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la   64 (467)
T 2axq_A           19 GRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALA   64 (467)
T ss_dssp             ----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHH
T ss_pred             cCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHH
Confidence            4566789999996 99999999999998 689999999988776554

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.16  E-value=0.00073  Score=53.76  Aligned_cols=42  Identities=26%  Similarity=0.152  Sum_probs=37.4

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .|++++|+|++|++|..+++.+...|++|+++++++++++.+
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~  204 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFL  204 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence            578999999999999999999999999999999988766543

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.16  E-value=0.00069  Score=52.34  Aligned_cols=42  Identities=19%  Similarity=0.278  Sum_probs=37.5

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .|++++|+|++||+|..+++.+...|++|+++++++++.+.+
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  166 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP  166 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999999988776543

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.14  E-value=0.00065  Score=53.43  Aligned_cols=43  Identities=14%  Similarity=0.120  Sum_probs=37.8

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      -.|++++|+|+++|+|..+++.+...|++|+++++++++++.+
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  185 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEEL  185 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            3578999999999999999999999999999999988776543

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.10  E-value=0.00059  Score=47.16  Aligned_cols=44  Identities=16%  Similarity=0.249  Sum_probs=38.3

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l  124 (147)
                      +++++|.|+ |++|..+++.|...|++|++++|+.++.++..+++
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~   64 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY   64 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh
Confidence            778999995 99999999999999999999999998877665543

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.08  E-value=0.00059  Score=53.23  Aligned_cols=46  Identities=13%  Similarity=0.181  Sum_probs=40.1

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQ  122 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~  122 (147)
                      ..+.+|.++|.|+ ||.|++++..|.+.|+ +|+++.|+.++.+++++
T Consensus       118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~  164 (282)
T 3fbt_A          118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG  164 (282)
T ss_dssp             CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT
T ss_pred             CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            3467899999985 7999999999999998 89999999988876644

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.08  E-value=0.0016  Score=52.07  Aligned_cols=43  Identities=28%  Similarity=0.311  Sum_probs=38.2

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      +.+++++|.|+ ||+|+.+++.+...|++|++++|++++++.+.
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~  207 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLE  207 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence            56689999998 99999999999999999999999988776553

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.07  E-value=0.0019  Score=52.04  Aligned_cols=43  Identities=19%  Similarity=0.322  Sum_probs=38.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .+.+++++|.|+ |+||..+++.+...|++|++++++.++++.+
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~  207 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQL  207 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH
Confidence            467899999997 9999999999999999999999998776544

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=97.07  E-value=0.00057  Score=51.88  Aligned_cols=29  Identities=21%  Similarity=0.371  Sum_probs=26.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD  105 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga  105 (147)
                      .+++++++||||+|+||..++++|+++|+
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~   31 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG   31 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC
Confidence            46678999999999999999999999985

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.06  E-value=0.0017  Score=47.39  Aligned_cols=42  Identities=24%  Similarity=0.452  Sum_probs=36.4

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~  123 (147)
                      ++.|.|++|.+|..+++.|++.|++|++++|++++.++..++
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            477889999999999999999999999999998877665443

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.05  E-value=0.0012  Score=51.06  Aligned_cols=41  Identities=37%  Similarity=0.349  Sum_probs=37.9

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      +|.++|.|+ ||.|++++..|++.|.+|+++.|+.++.++++
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la  158 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ  158 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            789999985 99999999999999999999999999888776

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.04  E-value=0.0016  Score=51.32  Aligned_cols=42  Identities=19%  Similarity=0.214  Sum_probs=37.5

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .|++++|+||+|++|...++.+...|++|+++++++++++.+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  191 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWT  191 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            588999999999999999999999999999999988766543

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.04  E-value=0.0013  Score=53.61  Aligned_cols=43  Identities=21%  Similarity=0.192  Sum_probs=37.7

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      -.|++++|+|++||||...++.+...|++|+++++++++++.+
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~  261 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV  261 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            4678999999999999999999999999999999888766543

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.00  E-value=0.0012  Score=52.11  Aligned_cols=41  Identities=12%  Similarity=0.100  Sum_probs=36.6

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      +++++|+||+|++|...++.+...|++|+++++++++++.+
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  205 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALL  205 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            37999999999999999999999999999999988876543

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=96.94  E-value=0.0015  Score=51.94  Aligned_cols=40  Identities=25%  Similarity=0.286  Sum_probs=35.6

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh---HHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA---ERVD  118 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~---~~~~  118 (147)
                      ++|++++|+|+ ||+|..+++.+...|++|+++++++   ++.+
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~  221 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQT  221 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHH
Confidence            44899999999 9999999999999999999999987   6653

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=96.89  E-value=0.0018  Score=45.27  Aligned_cols=41  Identities=15%  Similarity=0.238  Sum_probs=34.9

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      ...++.++|.| .|.+|..+++.|.+.|++|++++++++..+
T Consensus        16 ~~~~~~v~IiG-~G~iG~~la~~L~~~g~~V~vid~~~~~~~   56 (155)
T 2g1u_A           16 KQKSKYIVIFG-CGRLGSLIANLASSSGHSVVVVDKNEYAFH   56 (155)
T ss_dssp             -CCCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCGGGGG
T ss_pred             ccCCCcEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCHHHHH
Confidence            34567889998 599999999999999999999999987654

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.88  E-value=0.0032  Score=50.74  Aligned_cols=47  Identities=21%  Similarity=0.300  Sum_probs=41.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l  124 (147)
                      ++.||+++|.| .|.+|..+++.|.+.|++|++.|++.+.+++..+++
T Consensus       170 ~L~GktV~V~G-~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEEC-chHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            68999999998 588999999999999999999999988777665553

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=96.82  E-value=0.0051  Score=48.23  Aligned_cols=33  Identities=21%  Similarity=0.266  Sum_probs=30.3

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCC-------EEEEEeCCh
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGD-------NVIICSRSA  114 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga-------~V~i~~r~~  114 (147)
                      +++||||+|.||..++..|+.+|.       +|+++|+..
T Consensus         6 kVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~   45 (327)
T 1y7t_A            6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ   45 (327)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC
Confidence            699999999999999999999996       899999874

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.76  E-value=0.0036  Score=50.80  Aligned_cols=46  Identities=26%  Similarity=0.429  Sum_probs=39.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQS  123 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~  123 (147)
                      .+.|++++|.|+ |++|..+++.|...|+ +|++++|+.++.++.+++
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~  210 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARD  210 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHH
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            467899999996 9999999999999998 899999998876554443

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=96.74  E-value=0.0034  Score=49.32  Aligned_cols=41  Identities=27%  Similarity=0.288  Sum_probs=36.2

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .|++++|+|+ +|+|..+++.+...|++|+++++++++++.+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  204 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA  204 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            5789999999 8899999999999999999999998776543

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=96.70  E-value=0.0037  Score=49.19  Aligned_cols=39  Identities=23%  Similarity=0.328  Sum_probs=34.7

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      .|++++|+|++|++|+..++.+...|++|+++ +++++++
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~  188 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLE  188 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHH
Confidence            57899999999999999999999999999988 7766654

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.68  E-value=0.01  Score=45.98  Aligned_cols=43  Identities=23%  Similarity=0.345  Sum_probs=38.0

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      ..+.++++.|.| .|+||+++++.|...|++|++++|+.++.++
T Consensus       153 ~~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~  195 (300)
T 2rir_A          153 YTIHGSQVAVLG-LGRTGMTIARTFAALGANVKVGARSSAHLAR  195 (300)
T ss_dssp             SCSTTSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCCEEEEEc-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            467899999998 5999999999999999999999999876543

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.65  E-value=0.011  Score=45.60  Aligned_cols=43  Identities=21%  Similarity=0.356  Sum_probs=37.9

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      ..+.||++.|.| .|+||+.+++.|...|++|++++|+.++.+.
T Consensus       151 ~~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~  193 (293)
T 3d4o_A          151 FTIHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLAR  193 (293)
T ss_dssp             SCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            367899999998 6899999999999999999999999876543

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=96.65  E-value=0.0041  Score=50.94  Aligned_cols=43  Identities=28%  Similarity=0.329  Sum_probs=37.4

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      -.|++++|+|++|++|...++.+...|++|+++++++++++.+
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~  269 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC  269 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            3578999999999999999999999999999999888776543

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.62  E-value=0.0035  Score=47.64  Aligned_cols=54  Identities=28%  Similarity=0.325  Sum_probs=44.2

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCCh-------------------HHHHHHHHHHHHHhCCeE
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA-------------------ERVDSAVQSLREEFGEQH  132 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~-------------------~~~~~~~~~l~~~~~~~~  132 (147)
                      +.++.++|.| .||+|..+++.|+..|. +|.++|++.                   .+.+.+.+.+.+.++...
T Consensus        29 l~~~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~  102 (249)
T 1jw9_B           29 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIA  102 (249)
T ss_dssp             HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSE
T ss_pred             HhCCeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcE
Confidence            5667899998 68999999999999996 899999987                   677777777777665543

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=96.58  E-value=0.0082  Score=41.15  Aligned_cols=53  Identities=23%  Similarity=0.246  Sum_probs=39.9

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      .++|.| .|.+|..+++.|.+.|++|++++++++..+++.    + .+  ..++..|.+++
T Consensus         9 ~viIiG-~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~----~-~g--~~~i~gd~~~~   61 (140)
T 3fwz_A            9 HALLVG-YGRVGSLLGEKLLASDIPLVVIETSRTRVDELR----E-RG--VRAVLGNAANE   61 (140)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----H-TT--CEEEESCTTSH
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----H-cC--CCEEECCCCCH
Confidence            477777 588999999999999999999999998766542    2 12  23456666654

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.58  E-value=0.0099  Score=45.62  Aligned_cols=42  Identities=24%  Similarity=0.228  Sum_probs=35.7

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~  123 (147)
                      +++.|.| .|.+|..++..|+..|++|++++++++.+++..+.
T Consensus         5 ~kV~VIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLG-TGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            4566666 68899999999999999999999999888776554

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=96.57  E-value=0.0048  Score=43.97  Aligned_cols=42  Identities=21%  Similarity=0.143  Sum_probs=35.2

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHC-CCEEEEEeCChHHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSA  120 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~-Ga~V~i~~r~~~~~~~~  120 (147)
                      +.++.++|.| .|.+|..+++.|.+. |++|++++++++..+++
T Consensus        37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~   79 (183)
T 3c85_A           37 PGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQH   79 (183)
T ss_dssp             CTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHH
Confidence            4455677887 699999999999999 99999999998776543

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.47  E-value=0.0038  Score=47.73  Aligned_cols=42  Identities=21%  Similarity=0.400  Sum_probs=36.2

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSA  120 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~  120 (147)
                      .+.+ .++|.| +||.|++++..|++.|+ +|++++|+.++.+++
T Consensus       106 ~~~~-~vliiG-aGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~l  148 (253)
T 3u62_A          106 EVKE-PVVVVG-AGGAARAVIYALLQMGVKDIWVVNRTIERAKAL  148 (253)
T ss_dssp             CCCS-SEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTC
T ss_pred             CCCC-eEEEEC-cHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            3567 788888 59999999999999998 899999999887654

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.46  E-value=0.0052  Score=47.67  Aligned_cols=40  Identities=23%  Similarity=0.249  Sum_probs=35.7

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      ++ ++|+|++|++|...++.+...|++|+++++++++.+.+
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~  187 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYL  187 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            45 99999999999999999999999999999998876544

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=96.45  E-value=0.0036  Score=46.01  Aligned_cols=54  Identities=19%  Similarity=0.273  Sum_probs=40.8

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      .++|.|+ |.+|..+++.|.+.|++|++++++++..++..+    ..+  ..++..|.++.
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~----~~~--~~~i~gd~~~~   55 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAK----KLK--ATIIHGDGSHK   55 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----HSS--SEEEESCTTSH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH----HcC--CeEEEcCCCCH
Confidence            4788985 899999999999999999999999887665432    222  23566666653

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=96.42  E-value=0.0058  Score=48.08  Aligned_cols=40  Identities=28%  Similarity=0.253  Sum_probs=35.8

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~  119 (147)
                      .|++++|+|+ |++|...++.+...|+ +|+++++++++++.
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~  207 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRREL  207 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            7889999999 9999999999999999 89999998876553

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.37  E-value=0.009  Score=47.47  Aligned_cols=40  Identities=20%  Similarity=0.231  Sum_probs=33.8

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      -.|++++|+|++|++|...++.+...|++|++++ +.++.+
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~  221 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASE  221 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHH
Confidence            3578999999999999999999999999998888 444443

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.35  E-value=0.0037  Score=48.66  Aligned_cols=39  Identities=31%  Similarity=0.361  Sum_probs=34.7

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .++|+|++|++|...++.+...|++|+++++++++++.+
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  190 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL  190 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            799999999999999999999999999999987766543

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=96.34  E-value=0.007  Score=48.09  Aligned_cols=42  Identities=26%  Similarity=0.332  Sum_probs=36.6

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      .|++++|+|+ |++|...++.+...|++|+++++++++.+.+.
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~  228 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEAL  228 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            6789999995 99999999999999999999999887765543

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.31  E-value=0.0037  Score=48.72  Aligned_cols=39  Identities=31%  Similarity=0.432  Sum_probs=34.6

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .++|+|++|++|...++.+...|++|+++++++++++.+
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  191 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL  191 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            799999999999999999999999999999987766543

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.31  E-value=0.01  Score=44.97  Aligned_cols=45  Identities=27%  Similarity=0.348  Sum_probs=38.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~  123 (147)
                      .+++ .+.|.| .|++|.++++.|.+.|++|++++|+.++.++..++
T Consensus       114 ~l~~-~v~iiG-~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~  158 (263)
T 2d5c_A          114 PLKG-PALVLG-AGGAGRAVAFALREAGLEVWVWNRTPQRALALAEE  158 (263)
T ss_dssp             CCCS-CEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             CCCC-eEEEEC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence            5677 888998 58899999999999999999999998877766554

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.31  E-value=0.0038  Score=47.92  Aligned_cols=44  Identities=20%  Similarity=0.356  Sum_probs=38.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      .+.++.++|.| .|++|.++++.|.+.|++|++++|+.++.++..
T Consensus       126 ~~~~~~v~iiG-aG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~  169 (275)
T 2hk9_A          126 EVKEKSILVLG-AGGASRAVIYALVKEGAKVFLWNRTKEKAIKLA  169 (275)
T ss_dssp             TGGGSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHT
T ss_pred             CcCCCEEEEEC-chHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence            46788999998 589999999999999999999999988776554

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.31  E-value=0.0078  Score=46.42  Aligned_cols=45  Identities=18%  Similarity=0.279  Sum_probs=39.1

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSL  124 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~l  124 (147)
                      .++.++|.| +||.|++++..|++.|+ +|+++.|+.++.+++++++
T Consensus       118 ~~~~vlvlG-aGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~  163 (271)
T 1npy_A          118 KNAKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY  163 (271)
T ss_dssp             TTSCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            467889998 79999999999999997 7999999998888776665

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=96.27  E-value=0.011  Score=46.72  Aligned_cols=40  Identities=28%  Similarity=0.358  Sum_probs=35.8

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      .|++++|+| +|++|...++.+...|++|+++++++++++.
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~  228 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDR  228 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHH
Confidence            578999999 8999999999999999999999998877654

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=96.27  E-value=0.012  Score=46.36  Aligned_cols=38  Identities=18%  Similarity=0.074  Sum_probs=32.9

Q ss_pred             CC-CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110           79 PP-YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (147)
Q Consensus        79 ~~-k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~  116 (147)
                      .| .+++|+|++|++|...++.+...|++|++++++.++
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN  204 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence            46 899999999999999999888899999888766544

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=96.22  E-value=0.014  Score=45.99  Aligned_cols=40  Identities=25%  Similarity=0.287  Sum_probs=34.9

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      .|++++|+|+ |++|...++.+...|++|+++++++++++.
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~  207 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEV  207 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence            5789999996 999999999988999999999998877653

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.14  E-value=0.023  Score=43.79  Aligned_cols=40  Identities=15%  Similarity=0.287  Sum_probs=34.4

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      +.+.|.| .|.+|..++..|++.|++|++++++++.+++..
T Consensus        16 ~~I~VIG-~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~   55 (302)
T 1f0y_A           16 KHVTVIG-GGLMGAGIAQVAAATGHTVVLVDQTEDILAKSK   55 (302)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence            4577777 599999999999999999999999998877643

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.14  E-value=0.007  Score=47.26  Aligned_cols=43  Identities=23%  Similarity=0.406  Sum_probs=37.9

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      ..+.||.++|.|.++-+|+.++..|+..|++|.++.+....++
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~  198 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLS  198 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHH
Confidence            3689999999999888999999999999999999988765544

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.12  E-value=0.0099  Score=46.97  Aligned_cols=41  Identities=29%  Similarity=0.298  Sum_probs=36.0

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .|++++|+|+ |++|...++.+...|++|+++++++++++.+
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~  219 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA  219 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            5789999999 9999999999888999999999988776543

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=96.11  E-value=0.017  Score=46.07  Aligned_cols=49  Identities=18%  Similarity=0.244  Sum_probs=40.4

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLRE  126 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~~~~~~~~~~~l~~  126 (147)
                      +.++++.|+|++|.+|..++..++..|  .+|+++|+++++++..+.++..
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~   56 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRH   56 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhh
Confidence            456679999999999999999999999  4799999998877765555543

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.11  E-value=0.014  Score=45.61  Aligned_cols=41  Identities=20%  Similarity=0.217  Sum_probs=35.5

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      -.|++++|.|+ |++|...++.+...|++|+++++++++.+.
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~  205 (340)
T 3s2e_A          165 RPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNL  205 (340)
T ss_dssp             CTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence            35789999986 899999999999999999999998877653

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.07  E-value=0.013  Score=45.96  Aligned_cols=40  Identities=18%  Similarity=0.150  Sum_probs=35.1

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHC--CCEEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKA--GDNVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~--Ga~V~i~~r~~~~~~~  119 (147)
                      .|.+++|+|+ |++|...++.+...  |++|+++++++++.+.
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~  211 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDF  211 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHH
Confidence            6889999999 89999999988888  9999999998876543

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=96.04  E-value=0.036  Score=43.13  Aligned_cols=45  Identities=11%  Similarity=0.141  Sum_probs=36.4

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCC--EEEEEeC--ChHHHHHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGD--NVIICSR--SAERVDSAVQSLRE  126 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r--~~~~~~~~~~~l~~  126 (147)
                      ++.||||+|.+|..++..|+..|.  +++++|+  ++++++....++..
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~   50 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNH   50 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHH
Confidence            589999999999999999998884  6899999  87766554555544

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.00  E-value=0.013  Score=46.56  Aligned_cols=42  Identities=19%  Similarity=0.230  Sum_probs=35.2

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHH-CCCEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLK-AGDNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~-~Ga~V~i~~r~~~~~~~~  120 (147)
                      .|++++|+||+|++|...++.+.. .|++|+++++++++.+.+
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~  213 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV  213 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH
Confidence            577899999999999998887765 689999999988776543

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=95.99  E-value=0.016  Score=45.77  Aligned_cols=41  Identities=24%  Similarity=0.265  Sum_probs=35.3

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHC-CCEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~-Ga~V~i~~r~~~~~~~~  120 (147)
                      .|.+++|.|+ |++|...++.+... |++|+++++++++++.+
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~  227 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLA  227 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence            5789999998 89999999988888 99999999988766543

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=95.96  E-value=0.046  Score=45.04  Aligned_cols=62  Identities=16%  Similarity=0.150  Sum_probs=45.5

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH------HHHHHhCCeEEEEEcc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ------SLREEFGEQHVVQNVM  138 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~------~l~~~~~~~~~~~~~d  138 (147)
                      ..+.||+++|.| .|.||+.+++.|...|++|+++++++....+...      .+.+.....++++.+.
T Consensus       216 ~~L~GktV~ViG-~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v~~Leeal~~ADIVi~at  283 (435)
T 3gvp_A          216 MMFGGKQVVVCG-YGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLVKLNEVIRQVDIVITCT  283 (435)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEECS
T ss_pred             ceecCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEeccHHHHHhcCCEEEECC
Confidence            357899999998 5789999999999999999999998765433321      1333444556666553

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=95.94  E-value=0.016  Score=45.48  Aligned_cols=42  Identities=21%  Similarity=0.279  Sum_probs=36.3

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      -.|.+++|.|+ |++|...++.+...|++|+++++++++.+.+
T Consensus       175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  216 (348)
T 3two_A          175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA  216 (348)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence            35789999996 9999999999999999999999998876643

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.88  E-value=0.016  Score=45.04  Aligned_cols=44  Identities=18%  Similarity=0.287  Sum_probs=38.4

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      +.||.++|.|.++-+|+.++..|...|++|.++.+....+++.+
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~~~~  191 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGSMT  191 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHHH
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHHHhh
Confidence            89999999998888999999999999999999988765555443

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=95.85  E-value=0.007  Score=47.86  Aligned_cols=36  Identities=33%  Similarity=0.383  Sum_probs=30.2

Q ss_pred             CCCCCE-EEEeCCcC-----------------h-HHHHHHHHHHHCCCEEEEEeC
Q 032110           77 MLPPYN-VLITGSTK-----------------G-IGYALAKEFLKAGDNVIICSR  112 (147)
Q Consensus        77 ~~~~k~-~lVTG~s~-----------------G-IG~~~a~~La~~Ga~V~i~~r  112 (147)
                      ++.||. ++||+|+.                 | +|+++|++++.+||.|+++.+
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g   87 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYR   87 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEec
Confidence            357777 99997654                 4 999999999999999999876

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=95.85  E-value=0.018  Score=44.64  Aligned_cols=36  Identities=22%  Similarity=0.218  Sum_probs=32.1

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      -.|.+++|.||+|++|...++.+...|++|+.++++
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~  186 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK  186 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc
Confidence            357899999999999999999999999999988754

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=95.82  E-value=0.025  Score=45.01  Aligned_cols=41  Identities=24%  Similarity=0.297  Sum_probs=35.5

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .|.+++|.|+ |++|...++.+...|++|+++++++++++.+
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a  234 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAA  234 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            5778999997 8999999999889999999999988876644

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=95.82  E-value=0.018  Score=47.20  Aligned_cols=50  Identities=26%  Similarity=0.232  Sum_probs=38.0

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE  126 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~  126 (147)
                      ..+.+|.+.|.|. |+.|.++|+.|.++|++|.+.|++........+++.+
T Consensus         5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~   54 (451)
T 3lk7_A            5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLE   54 (451)
T ss_dssp             CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHH
T ss_pred             hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHh
Confidence            4567899999996 7889999999999999999999865322223344443

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=95.80  E-value=0.011  Score=46.28  Aligned_cols=39  Identities=26%  Similarity=0.358  Sum_probs=34.8

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVD  118 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~  118 (147)
                      .|++++|+|+ |++|...++.+...|+ +|+++++++++.+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~  203 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLA  203 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            7889999999 9999999999999999 8999999876654

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=95.76  E-value=0.031  Score=44.13  Aligned_cols=43  Identities=16%  Similarity=0.100  Sum_probs=35.9

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSL  124 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~l  124 (147)
                      .++.|.|+ |.+|..++..|+..|. +|+++|++++.++....++
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l   53 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDL   53 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHH
Confidence            36888886 9999999999999997 9999999998777644443

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=95.76  E-value=0.025  Score=45.09  Aligned_cols=40  Identities=25%  Similarity=0.289  Sum_probs=34.8

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~  119 (147)
                      .|++++|+| +|++|...++.+...| ++|+++++++++.+.
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~  235 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKL  235 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHH
Confidence            578999999 8999999999999999 599999998876543

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=95.74  E-value=0.023  Score=44.69  Aligned_cols=45  Identities=13%  Similarity=0.199  Sum_probs=36.0

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCC-------EEEEEeCC----hHHHHHHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGD-------NVIICSRS----AERVDSAVQSLR  125 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga-------~V~i~~r~----~~~~~~~~~~l~  125 (147)
                      .+++|||++|.+|..++..|+..|.       .|+++|++    +++++..+.++.
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~   61 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEID   61 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHh
Confidence            3699999999999999999999885       79999998    555554444443

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.72  E-value=0.028  Score=42.94  Aligned_cols=41  Identities=15%  Similarity=0.204  Sum_probs=35.8

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      +++.|.|++|.+|..++..|++.|++|++++|+++..++..
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~   52 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ   52 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            36888898899999999999999999999999988766543

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=95.66  E-value=0.061  Score=44.63  Aligned_cols=42  Identities=17%  Similarity=0.167  Sum_probs=36.7

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      ..+.||+++|.| .|.||+.+|+.+...|++|+++++++....
T Consensus       243 ~~L~GKTVgVIG-~G~IGr~vA~~lrafGa~Viv~d~dp~~a~  284 (464)
T 3n58_A          243 VMMAGKVAVVCG-YGDVGKGSAQSLAGAGARVKVTEVDPICAL  284 (464)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHH
T ss_pred             CcccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCcchhh
Confidence            458999999998 677999999999999999999999876543

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=95.64  E-value=0.034  Score=44.59  Aligned_cols=39  Identities=28%  Similarity=0.441  Sum_probs=35.4

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~  116 (147)
                      .+.||++.|.| .|.+|..+++.|.+.|++|++.|.+.+.
T Consensus       172 ~L~GktV~I~G-~GnVG~~~A~~l~~~GakVvvsD~~~~~  210 (355)
T 1c1d_A          172 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTER  210 (355)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCccH
Confidence            58999999997 7999999999999999999999988654

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=95.63  E-value=0.035  Score=43.72  Aligned_cols=39  Identities=26%  Similarity=0.293  Sum_probs=33.8

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVD  118 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~  118 (147)
                      .|.+++|.|+ |++|...++.+...|+ +|+++++++++++
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~  210 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLS  210 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            5779999995 9999999998888999 8999999887654

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.63  E-value=0.024  Score=44.55  Aligned_cols=43  Identities=16%  Similarity=0.239  Sum_probs=37.1

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      .++.||.++|.|.++-+|+.++..|...|++|.++.+....++
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~  203 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED  203 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch
Confidence            3689999999998888999999999999999999998554443

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=95.60  E-value=0.034  Score=46.52  Aligned_cols=43  Identities=21%  Similarity=0.233  Sum_probs=37.9

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .+.|++++|.|. |.||..+++.+...|++|+++++++.+.+.+
T Consensus       271 ~l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A  313 (494)
T 3ce6_A          271 LIGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINALQA  313 (494)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            467899999985 9999999999999999999999998776543

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.60  E-value=0.02  Score=44.67  Aligned_cols=44  Identities=20%  Similarity=0.320  Sum_probs=37.7

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      ..+.||.++|.|.++-.|+.++..|+..|++|.++.+....+++
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~~  200 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLAD  200 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHHH
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHHH
Confidence            35899999999988889999999999999999999876554443

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=95.58  E-value=0.032  Score=44.15  Aligned_cols=41  Identities=17%  Similarity=0.284  Sum_probs=34.9

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~  119 (147)
                      ..|++++|+|+ |++|...++.+...|+ +|+++++++++++.
T Consensus       191 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~  232 (374)
T 1cdo_A          191 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEK  232 (374)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH
Confidence            35789999995 9999999999989998 89999998877654

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=95.57  E-value=0.027  Score=44.33  Aligned_cols=40  Identities=25%  Similarity=0.198  Sum_probs=34.5

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCE-EEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~-V~i~~r~~~~~~~  119 (147)
                      .|++++|.|+ |++|...++.+...|++ |+++++++++.+.
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~  219 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKF  219 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            5778999997 99999999999999997 8899988876653

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=95.57  E-value=0.088  Score=41.37  Aligned_cols=48  Identities=10%  Similarity=0.080  Sum_probs=37.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC--hHHHHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS--AERVDSAVQSLR  125 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~--~~~~~~~~~~l~  125 (147)
                      .++.+.+.|.|+ |.+|..++..|+..|. +|+++|++  ++..+....++.
T Consensus         5 ~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~   55 (315)
T 3tl2_A            5 TIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDML   55 (315)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHH
Confidence            345667899995 9999999999999998 99999999  555554444443

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=95.56  E-value=0.025  Score=41.59  Aligned_cols=38  Identities=26%  Similarity=0.386  Sum_probs=33.2

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      ++.|.| .|.+|..+++.|++.|++|++++|+++..++.
T Consensus        30 ~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~   67 (215)
T 2vns_A           30 KVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARL   67 (215)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHH
T ss_pred             EEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            577777 89999999999999999999999998776544

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=95.55  E-value=0.051  Score=44.03  Aligned_cols=42  Identities=14%  Similarity=0.154  Sum_probs=36.2

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      +.+++++|.|+ |.+|..+++.+...|++|++++++.++++++
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~  223 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQV  223 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            46788999985 8999999999999999999999998765543

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=95.54  E-value=0.034  Score=44.06  Aligned_cols=40  Identities=15%  Similarity=0.244  Sum_probs=34.7

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~  119 (147)
                      .|++++|+| +|++|...++.+...|+ +|+++++++++++.
T Consensus       191 ~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~  231 (374)
T 2jhf_A          191 QGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAK  231 (374)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence            578999999 59999999999999998 89999998877654

>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*

Probab=95.52  E-value=0.041  Score=43.49  Aligned_cols=42  Identities=24%  Similarity=0.388  Sum_probs=35.0

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l  124 (147)
                      .+.|.| +|-+|..+|..++..|++|++.|.+++.+++..+.+
T Consensus         8 ~VaViG-aG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i   49 (319)
T 3ado_A            8 DVLIVG-SGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENI   49 (319)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHH
T ss_pred             eEEEEC-CcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHH
Confidence            466666 689999999999999999999999998777655444

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=95.51  E-value=0.035  Score=43.96  Aligned_cols=40  Identities=18%  Similarity=0.219  Sum_probs=34.4

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~  119 (147)
                      .|.+++|+|+ |++|...++.+...|+ +|+++++++++++.
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~  235 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPK  235 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence            5779999995 9999999999889998 89999998877653

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.49  E-value=0.019  Score=44.75  Aligned_cols=42  Identities=17%  Similarity=0.311  Sum_probs=36.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      .+.||.++|.|.++-+|+.++..|...|++|.++.+....++
T Consensus       158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~  199 (285)
T 3l07_A          158 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLK  199 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHH
Confidence            689999999998888999999999999999999987654443

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=95.47  E-value=0.039  Score=43.77  Aligned_cols=40  Identities=20%  Similarity=0.206  Sum_probs=33.8

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      ..|++++|.|++|++|...++.+...|++|+.+. ++++++
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~  202 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD  202 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH
Confidence            4678999999999999999999999999988876 555543

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=95.44  E-value=0.033  Score=45.18  Aligned_cols=41  Identities=22%  Similarity=0.261  Sum_probs=35.9

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      +.+++++|.| .|.+|+.+++.+...|++|++++++.+.++.
T Consensus       170 l~g~~V~ViG-aG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~  210 (401)
T 1x13_A          170 VPPAKVMVIG-AGVAGLAAIGAANSLGAIVRAFDTRPEVKEQ  210 (401)
T ss_dssp             ECCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCGGGHHH
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHH
Confidence            5688999999 5899999999999999999999998876543

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=95.43  E-value=0.04  Score=44.21  Aligned_cols=41  Identities=34%  Similarity=0.396  Sum_probs=35.1

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~  119 (147)
                      -.|.+++|.|+ |++|...++.+...|+ +|+++++++++++.
T Consensus       212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~  253 (404)
T 3ip1_A          212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNL  253 (404)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            35779999997 9999999999999999 89999998877653

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=95.43  E-value=0.031  Score=41.90  Aligned_cols=39  Identities=21%  Similarity=0.379  Sum_probs=32.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~  116 (147)
                      .+.++++.|.| .|.+|.+++..|++.|++|++++|+++.
T Consensus        16 ~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           16 YFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKA   54 (245)
T ss_dssp             ---CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             ccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            45666777775 9999999999999999999999999876

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=95.41  E-value=0.031  Score=44.05  Aligned_cols=41  Identities=27%  Similarity=0.276  Sum_probs=35.4

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .|.+++|+| +|++|...++.+...|++|+++++++++.+.+
T Consensus       180 ~g~~VlV~G-aG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~  220 (357)
T 2cf5_A          180 PGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSNKKREEA  220 (357)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHHTCEEEEEESSTTHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Confidence            678999998 59999999998888999999999988776544

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=95.41  E-value=0.037  Score=43.56  Aligned_cols=36  Identities=25%  Similarity=0.294  Sum_probs=31.1

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      .|.+++|.|++|++|...++.+...|++++++.+..
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~  202 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDR  202 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCc
Confidence            578999999999999999998888999988776543

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=95.40  E-value=0.06  Score=42.51  Aligned_cols=48  Identities=17%  Similarity=0.118  Sum_probs=38.9

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLRE  126 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~l~~  126 (147)
                      |+.+.+.|.|+ |.+|..++..|+..|. +|+++|+++++++....++..
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~   53 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAE   53 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHH
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhc
Confidence            34457888997 9999999999999998 999999999887655555544

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=95.39  E-value=0.053  Score=44.48  Aligned_cols=46  Identities=24%  Similarity=0.283  Sum_probs=38.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEE-EEeC----------ChHHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVI-ICSR----------SAERVDSAVQS  123 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~-i~~r----------~~~~~~~~~~~  123 (147)
                      +++||+++|+| .|.+|...++.|.+.|++|+ +.|.          +.+.+.+..++
T Consensus       215 ~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~  271 (419)
T 3aoe_E          215 DLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEA  271 (419)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHH
T ss_pred             CccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHh
Confidence            68899999998 89999999999999999988 7887          56666655544

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.37  E-value=0.03  Score=43.75  Aligned_cols=46  Identities=20%  Similarity=0.291  Sum_probs=39.7

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ  122 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~  122 (147)
                      ++.||.++|.|++.-+|+.++..|+..|++|.++.+....+++...
T Consensus       156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~~  201 (288)
T 1b0a_A          156 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVE  201 (288)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHHH
T ss_pred             CCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHHHhc
Confidence            6899999999998889999999999999999999887766654433

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=95.37  E-value=0.023  Score=43.85  Aligned_cols=40  Identities=25%  Similarity=0.202  Sum_probs=34.6

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .|.+++|.|+ |++|...++.+...|++|+.++ ++++.+.+
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~  181 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALA  181 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH
Confidence            5789999999 9999999999989999999999 77665543

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=95.35  E-value=0.045  Score=43.43  Aligned_cols=39  Identities=28%  Similarity=0.290  Sum_probs=34.1

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVD  118 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~  118 (147)
                      .|.+++|.|+ |++|...++.+...|+ +|+++++++++.+
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~  221 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRR  221 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            5789999997 9999999999999998 8999998887654

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=95.35  E-value=0.012  Score=43.53  Aligned_cols=53  Identities=11%  Similarity=0.025  Sum_probs=39.5

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      .+.++|.|+ |.+|..+++.|.+.|+ |++++++++..++..      .+  ..++..|.++.
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~------~~--~~~i~gd~~~~   61 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR------SG--ANFVHGDPTRV   61 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH------TT--CEEEESCTTCH
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh------cC--CeEEEcCCCCH
Confidence            346888886 8999999999999999 999999987765432      12  34566776654

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=95.34  E-value=0.023  Score=45.32  Aligned_cols=42  Identities=21%  Similarity=0.279  Sum_probs=35.6

Q ss_pred             CCCEEEEeC-CcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITG-STKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG-~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .|.+++|.| |+|++|...++.+...|++|+++++++++.+.+
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~  212 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLL  212 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            466788886 899999999999989999999999988776543

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=95.33  E-value=0.035  Score=43.87  Aligned_cols=41  Identities=22%  Similarity=0.290  Sum_probs=34.8

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~  120 (147)
                      .|.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~  231 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA  231 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            5779999995 9999999998888998 799999888776543

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=95.32  E-value=0.051  Score=43.02  Aligned_cols=49  Identities=14%  Similarity=0.213  Sum_probs=40.2

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLRE  126 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r~~~~~~~~~~~l~~  126 (147)
                      ...++++.|+|+ |++|..++..|+..|.  +|+++|+++++++....++..
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~   56 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLED   56 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhh
Confidence            345567899995 9999999999999886  899999999888776666654

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=95.29  E-value=0.033  Score=44.73  Aligned_cols=41  Identities=22%  Similarity=0.289  Sum_probs=35.8

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      .+.+++++|.| .|++|+.+++.+...|++|+++++++++.+
T Consensus       169 ~l~g~~V~ViG-aG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~  209 (384)
T 1l7d_A          169 TVPPARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKE  209 (384)
T ss_dssp             EECCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHH
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            45788999999 589999999999999999999999876544

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=95.28  E-value=0.051  Score=42.42  Aligned_cols=44  Identities=20%  Similarity=0.316  Sum_probs=34.8

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCC--EEEEEeC--ChHHHHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGD--NVIICSR--SAERVDSAVQSLR  125 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r--~~~~~~~~~~~l~  125 (147)
                      +++|||++|.+|..++..|+..|.  .++++|+  ++++++..+.++.
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~   49 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIY   49 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHH
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHH
Confidence            589999999999999999998884  6888998  7665554444443

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=95.23  E-value=0.058  Score=42.09  Aligned_cols=57  Identities=19%  Similarity=0.352  Sum_probs=44.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCCh------------------HHHHHHHHHHHHHhCCeEEE
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA------------------ERVDSAVQSLREEFGEQHVV  134 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~------------------~~~~~~~~~l~~~~~~~~~~  134 (147)
                      .+.++.++|.| .||+|..+++.|+..| .++.++|.+.                  .+.+.+.+.+.+.++...+.
T Consensus        33 kL~~~~VlVvG-aGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~  108 (292)
T 3h8v_A           33 KIRTFAVAIVG-VGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFE  108 (292)
T ss_dssp             GGGGCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEE
T ss_pred             HHhCCeEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEE
Confidence            46677888887 7999999999999999 5899988765                  46666777777777665443

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.20  E-value=0.027  Score=44.26  Aligned_cols=43  Identities=16%  Similarity=0.325  Sum_probs=37.7

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      ++.||.++|.|++.-+|+.++..|+..|++|.++.+....+++
T Consensus       162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~  204 (301)
T 1a4i_A          162 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDE  204 (301)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHHH
Confidence            6889999999998889999999999999999999877655543

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=95.18  E-value=0.042  Score=43.48  Aligned_cols=40  Identities=18%  Similarity=0.322  Sum_probs=34.1

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~  119 (147)
                      .|++++|.|+ |++|...++.+...|+ +|+++++++++++.
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~  231 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPK  231 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHH
Confidence            5779999995 9999999998888998 89999988877653

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=95.18  E-value=0.059  Score=41.98  Aligned_cols=40  Identities=20%  Similarity=0.219  Sum_probs=33.6

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      ..+.|.| .|.+|..++..|++.|++|.+++|+++..++..
T Consensus         5 mki~iiG-~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~   44 (359)
T 1bg6_A            5 KTYAVLG-LGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQ   44 (359)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CeEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence            3577777 589999999999999999999999987766543

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=95.17  E-value=0.058  Score=40.84  Aligned_cols=54  Identities=22%  Similarity=0.271  Sum_probs=41.0

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCCh-------------------HHHHHHHHHHHHHhCCeE
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA-------------------ERVDSAVQSLREEFGEQH  132 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~-------------------~~~~~~~~~l~~~~~~~~  132 (147)
                      +.++.++|.| .||+|.++++.|+..|. ++.++|.+.                   .+.+.+.+.+.+.++...
T Consensus        26 l~~~~VlvvG-~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~   99 (251)
T 1zud_1           26 LLDSQVLIIG-LGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQ   99 (251)
T ss_dssp             HHTCEEEEEC-CSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSE
T ss_pred             HhcCcEEEEc-cCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCE
Confidence            5567899998 58899999999999995 788886542                   456667777776665543

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=95.17  E-value=0.038  Score=44.19  Aligned_cols=40  Identities=28%  Similarity=0.365  Sum_probs=34.5

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~  119 (147)
                      .|.+++|.|+ |++|...++.+...|+ +|+++++++++++.
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~  225 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKL  225 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH
Confidence            5789999996 9999999998888898 89999998877653

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=95.16  E-value=0.068  Score=42.25  Aligned_cols=47  Identities=17%  Similarity=0.262  Sum_probs=39.6

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHHH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREE  127 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r~~~~~~~~~~~l~~~  127 (147)
                      .+.+.|.|+ |.+|..++..|+..|.  +|+++|+++++++..+.++...
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~   53 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHG   53 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhc
Confidence            347889995 9999999999999996  8999999998888777677653

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=95.13  E-value=0.037  Score=43.58  Aligned_cols=39  Identities=18%  Similarity=0.251  Sum_probs=32.9

Q ss_pred             CCEEEEeCCcChHHHHH-HHHH-HHCCCE-EEEEeCChH---HHHH
Q 032110           80 PYNVLITGSTKGIGYAL-AKEF-LKAGDN-VIICSRSAE---RVDS  119 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~-a~~L-a~~Ga~-V~i~~r~~~---~~~~  119 (147)
                      +.+++|.|+ |++|... ++.+ ...|++ |++++++++   +.+.
T Consensus       173 ~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~  217 (357)
T 2b5w_A          173 PSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDI  217 (357)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHH
Confidence            389999999 9999999 8877 778987 999999877   6543

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=95.13  E-value=0.021  Score=42.18  Aligned_cols=42  Identities=33%  Similarity=0.370  Sum_probs=35.6

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEE-EeCChHHHHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQS  123 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i-~~r~~~~~~~~~~~  123 (147)
                      +++.|.| .|.+|.+++..|++.|++|++ ++|++++.++..++
T Consensus        24 mkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~   66 (220)
T 4huj_A           24 TTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDR   66 (220)
T ss_dssp             CCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHH
Confidence            4577777 899999999999999999998 99999887766544

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=95.09  E-value=0.026  Score=44.80  Aligned_cols=39  Identities=28%  Similarity=0.363  Sum_probs=34.3

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVD  118 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~  118 (147)
                      .|.+++|.|+ |++|...++.+...|+ +|+++++++++++
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~  232 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYE  232 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            5778999997 9999999999999998 7999998887765

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=95.09  E-value=0.067  Score=41.42  Aligned_cols=40  Identities=30%  Similarity=0.518  Sum_probs=33.5

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      +++.|.| .|.+|..+++.|++.|++|++++|++++.+++.
T Consensus        10 ~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~   49 (306)
T 3l6d_A           10 FDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALV   49 (306)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHH
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            3455555 899999999999999999999999998776654

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=95.08  E-value=0.065  Score=42.75  Aligned_cols=40  Identities=25%  Similarity=0.331  Sum_probs=34.0

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~  119 (147)
                      .|.+++|.| +|++|...++.+...|+ +|+++++++++++.
T Consensus       185 ~g~~VlV~G-aG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~  225 (398)
T 1kol_A          185 PGSTVYVAG-AGPVGLAAAASARLLGAAVVIVGDLNPARLAH  225 (398)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHH
Confidence            578999999 59999999998888998 78889998877653

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=95.05  E-value=0.14  Score=42.26  Aligned_cols=61  Identities=15%  Similarity=0.189  Sum_probs=45.3

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH------HHHHHhCCeEEEEEc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ------SLREEFGEQHVVQNV  137 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~------~l~~~~~~~~~~~~~  137 (147)
                      ..+.||+++|.| .|-||+.+++.|...|++|+++++++....++..      .+.+.....++++..
T Consensus       207 ~~L~GktVgIiG-~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~sL~eal~~ADVVilt  273 (436)
T 3h9u_A          207 VMIAGKTACVCG-YGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLVEDVVEEAHIFVTT  273 (436)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEEC
T ss_pred             CcccCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeecCHHHHHhhCCEEEEC
Confidence            457899999998 8899999999999999999999998865543321      233344455555543

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=95.04  E-value=0.081  Score=41.65  Aligned_cols=43  Identities=16%  Similarity=0.121  Sum_probs=35.9

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSL  124 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~l  124 (147)
                      +.+.|.|+ |.+|..++..|+..|. +|+++|++++.++....++
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l   58 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDL   58 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHH
Confidence            36888886 9999999999999998 9999999998877544333

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=95.04  E-value=0.063  Score=44.63  Aligned_cols=42  Identities=24%  Similarity=0.413  Sum_probs=35.0

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l  124 (147)
                      ++.|.| .|-+|..+|..|++.|++|++.+++++.+++..+.+
T Consensus         7 kVgVIG-aG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i   48 (483)
T 3mog_A            7 TVAVIG-SGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGI   48 (483)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHH
T ss_pred             EEEEEC-cCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH
Confidence            344445 699999999999999999999999999888766543

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=95.03  E-value=0.042  Score=43.24  Aligned_cols=34  Identities=24%  Similarity=0.242  Sum_probs=31.3

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCC--CEEEEEeCChH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAE  115 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~~~  115 (147)
                      ++.|+||+|.+|..++..|+.+|  .+|+++|++++
T Consensus        10 KI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~   45 (326)
T 1smk_A           10 KVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA   45 (326)
T ss_dssp             EEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc
Confidence            69999999999999999999999  78999998876

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=95.00  E-value=0.07  Score=40.58  Aligned_cols=38  Identities=16%  Similarity=0.389  Sum_probs=32.8

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .+.|.| .|.+|..++..|++.|++|++++|+++..++.
T Consensus         5 ~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~   42 (316)
T 2ew2_A            5 KIAIAG-AGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAI   42 (316)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             eEEEEC-cCHHHHHHHHHHHhCCCcEEEEECCHHHHHHH
Confidence            577777 59999999999999999999999998776554

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=94.99  E-value=0.058  Score=42.60  Aligned_cols=40  Identities=15%  Similarity=0.220  Sum_probs=33.9

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~  119 (147)
                      .|++++|.| +|++|...++.+...|+ +|+++++++++++.
T Consensus       190 ~g~~VlV~G-aG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~  230 (371)
T 1f8f_A          190 PASSFVTWG-AGAVGLSALLAAKVCGASIIIAVDIVESRLEL  230 (371)
T ss_dssp             TTCEEEEES-CSHHHHHHHHHHHHHTCSEEEEEESCHHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHH
Confidence            577999998 59999999998888998 69999998877653

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=94.98  E-value=0.099  Score=41.42  Aligned_cols=47  Identities=15%  Similarity=0.309  Sum_probs=40.1

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLRE  126 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r~~~~~~~~~~~l~~  126 (147)
                      ..+.+.|.|+ |.+|..++..|+..|.  +|+++|+++++++..+.++..
T Consensus        18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~   66 (331)
T 4aj2_A           18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQH   66 (331)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhh
Confidence            4557889996 9999999999999996  899999999888877777764

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=94.97  E-value=0.0063  Score=42.89  Aligned_cols=52  Identities=15%  Similarity=0.004  Sum_probs=36.2

Q ss_pred             ChHHHHHHHHHHHCCCEEEEEeCChHHHHH---HHHHHHHHhCCeEEEEEcccCCC
Q 032110           90 KGIGYALAKEFLKAGDNVIICSRSAERVDS---AVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        90 ~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~---~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      +-++.++++.|++.|++|++..|+++..++   ..+++. ..+.....+.+|+++.
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~-~~G~~~~~i~~Dv~~~   80 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVT-QAGMDYVYIPVDWQNP   80 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHH-HTTCEEEECCCCTTSC
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHH-HcCCeEEEecCCCCCC
Confidence            346789999999999999999887654321   233333 3455566778888876

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=94.88  E-value=0.091  Score=41.02  Aligned_cols=39  Identities=28%  Similarity=0.347  Sum_probs=34.1

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCC--EEEEEeCChHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSA  120 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r~~~~~~~~  120 (147)
                      +++.|.| .|.||..+++.|.+.|+  +|++++|+++..+++
T Consensus        34 ~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a   74 (314)
T 3ggo_A           34 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKA   74 (314)
T ss_dssp             SEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH
T ss_pred             CEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHH
Confidence            4677777 89999999999999999  999999999876654

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=94.84  E-value=0.091  Score=41.90  Aligned_cols=55  Identities=16%  Similarity=0.326  Sum_probs=43.1

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCCh-------------------HHHHHHHHHHHHHhCCeEE
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHV  133 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~-------------------~~~~~~~~~l~~~~~~~~~  133 (147)
                      +.++.++|.| .||+|.++++.|+..| .++.++|.+.                   .+.+.+.+.+.+.++...+
T Consensus        32 L~~~~VlIvG-aGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v  106 (340)
T 3rui_A           32 IKNTKVLLLG-AGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDA  106 (340)
T ss_dssp             HHTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEE
T ss_pred             HhCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEE
Confidence            5677899997 7999999999999999 5788887643                   3566677777777776543

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=94.81  E-value=0.089  Score=40.94  Aligned_cols=39  Identities=18%  Similarity=0.152  Sum_probs=33.9

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSA  120 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~  120 (147)
                      +++.|.|+ |.+|..++..|+..|. +|+++|++++.++..
T Consensus         5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~   44 (317)
T 2ewd_A            5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGK   44 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHH
Confidence            36788886 9999999999999998 999999998877754

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=94.80  E-value=0.09  Score=40.82  Aligned_cols=42  Identities=17%  Similarity=0.383  Sum_probs=35.2

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSL  124 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r~~~~~~~~~~~l  124 (147)
                      ++.|.|+ |.+|..++..|+..|.  +|+++|+++++++....++
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l   45 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDI   45 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhh
Confidence            5778886 9999999999999998  9999999988776544444

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=94.79  E-value=0.092  Score=41.35  Aligned_cols=47  Identities=17%  Similarity=0.179  Sum_probs=38.2

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLRE  126 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~l~~  126 (147)
                      +.+.+.|.| +|.+|..++..|+..|. +|+++|+++++++..+.++..
T Consensus         4 ~~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~   51 (321)
T 3p7m_A            4 ARKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQ   51 (321)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHh
Confidence            345678888 59999999999999987 999999999887765555543

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=94.77  E-value=0.095  Score=41.16  Aligned_cols=44  Identities=14%  Similarity=0.174  Sum_probs=36.3

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLR  125 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~l~  125 (147)
                      +++.|.|+ |.+|..++..|+..|. +|+++|+++++++....++.
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~   49 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTS   49 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHH
Confidence            36888887 9999999999999997 89999999887775544443

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=94.77  E-value=0.2  Score=39.65  Aligned_cols=46  Identities=15%  Similarity=0.242  Sum_probs=39.2

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLRE  126 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r~~~~~~~~~~~l~~  126 (147)
                      .+.+.|.|+ |.+|..++..|+..|.  +|++.|++++.++..+.++..
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~   68 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEH   68 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhh
Confidence            347888997 9999999999999996  899999999888877666654

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=94.72  E-value=0.078  Score=41.39  Aligned_cols=41  Identities=17%  Similarity=0.233  Sum_probs=33.9

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHC-CCEEEEEeCChHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDS  119 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~-Ga~V~i~~r~~~~~~~  119 (147)
                      -.|.+++|.|+ |++|...++.+... |++|+++++++++++.
T Consensus       170 ~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~  211 (345)
T 3jv7_A          170 GPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLAL  211 (345)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH
Confidence            35779999997 99999988877776 7899999999877653

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=94.68  E-value=0.056  Score=42.39  Aligned_cols=39  Identities=13%  Similarity=0.120  Sum_probs=33.4

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVD  118 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~  118 (147)
                      .|.+++|.| +|++|...++.+...|+ +|+++++++++++
T Consensus       166 ~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~  205 (352)
T 3fpc_A          166 LGDTVCVIG-IGPVGLMSVAGANHLGAGRIFAVGSRKHCCD  205 (352)
T ss_dssp             TTCCEEEEC-CSHHHHHHHHHHHTTTCSSEEEECCCHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHH
Confidence            577899998 59999999999889998 7999999887654

>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}

Probab=94.67  E-value=0.091  Score=40.90  Aligned_cols=43  Identities=16%  Similarity=0.281  Sum_probs=36.6

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~  123 (147)
                      ..|.+-|.| .|-+|..+|..|+ .|++|++++++++.+++..+.
T Consensus        11 ~~~~V~vIG-~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~   53 (293)
T 1zej_A           11 HHMKVFVIG-AGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQ   53 (293)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHH
T ss_pred             CCCeEEEEe-eCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHH
Confidence            456777777 6889999999999 999999999999988877665

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=94.66  E-value=0.11  Score=43.54  Aligned_cols=41  Identities=15%  Similarity=0.176  Sum_probs=36.8

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~  117 (147)
                      ..+.||++.|.| .|.||..+|+.|...|++|++++++....
T Consensus       273 ~~L~GktVgIIG-~G~IG~~vA~~l~~~G~~V~v~d~~~~~~  313 (494)
T 3d64_A          273 VMIAGKIAVVAG-YGDVGKGCAQSLRGLGATVWVTEIDPICA  313 (494)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSCHHHH
T ss_pred             cccCCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCChHhH
Confidence            358899999998 68999999999999999999999998754

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=94.63  E-value=0.095  Score=40.32  Aligned_cols=40  Identities=20%  Similarity=0.251  Sum_probs=33.7

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ  122 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~  122 (147)
                      ++.|.| .|.+|..++..|++.|++|++++|++++.++..+
T Consensus         9 ~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~   48 (303)
T 3g0o_A            9 HVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLA   48 (303)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             eEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Confidence            455555 8999999999999999999999999988766543

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=94.62  E-value=0.093  Score=39.13  Aligned_cols=41  Identities=12%  Similarity=0.256  Sum_probs=34.0

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCC----EEEEEeCChHHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGD----NVIICSRSAERVDSAVQS  123 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga----~V~i~~r~~~~~~~~~~~  123 (147)
                      ++.|.| .|.+|..+++.|++.|+    +|++++|++++.++..++
T Consensus         4 ~i~iIG-~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~   48 (247)
T 3gt0_A            4 QIGFIG-CGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEK   48 (247)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHH
T ss_pred             eEEEEC-ccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHH
Confidence            355555 89999999999999998    999999999887766543

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=94.61  E-value=0.082  Score=40.97  Aligned_cols=43  Identities=19%  Similarity=0.387  Sum_probs=36.7

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLR  125 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~~~~~~~~~~~l~  125 (147)
                      .+.|.| +|.+|..++..|+..|  .+|++++++++.++....++.
T Consensus         3 kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~   47 (309)
T 1hyh_A            3 KIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQ   47 (309)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHH
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHH
Confidence            577888 8999999999999999  799999999988877665553

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=94.57  E-value=0.16  Score=40.19  Aligned_cols=37  Identities=30%  Similarity=0.390  Sum_probs=30.9

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      +++|-|+ |++|..+++.|++ .++|.+.+++.+.++++
T Consensus        18 kilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~   54 (365)
T 3abi_A           18 KVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKV   54 (365)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH
Confidence            5888887 9999999999875 57999999998777654

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=94.56  E-value=0.084  Score=40.22  Aligned_cols=39  Identities=33%  Similarity=0.439  Sum_probs=33.3

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      ++.|.| .|.+|..++..|++.|++|++++|++++.++..
T Consensus         3 ~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~   41 (287)
T 3pef_A            3 KFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELA   41 (287)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH
T ss_pred             EEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH
Confidence            456666 799999999999999999999999988766553

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=94.53  E-value=0.1  Score=40.75  Aligned_cols=43  Identities=19%  Similarity=0.267  Sum_probs=36.1

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLR  125 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r~~~~~~~~~~~l~  125 (147)
                      .+.|.|+ |.+|..++..|+..|.  +|++++++++.++....++.
T Consensus         2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~   46 (319)
T 1a5z_A            2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLI   46 (319)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHH
Confidence            4678886 9999999999999998  99999999888776555443

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=94.49  E-value=0.1  Score=40.41  Aligned_cols=40  Identities=28%  Similarity=0.372  Sum_probs=33.7

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      +++.|.| .|-+|..++..|++.|++|++++|++++.+++.
T Consensus        22 ~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~   61 (310)
T 3doj_A           22 MEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELV   61 (310)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence            3566665 799999999999999999999999998766553

>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}

Probab=94.48  E-value=0.092  Score=40.96  Aligned_cols=38  Identities=26%  Similarity=0.414  Sum_probs=32.0

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      +.|-| .|.+|..++..|++.|++|.+++|++++.+...
T Consensus        17 I~iIG-~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~   54 (335)
T 1z82_A           17 FFVLG-AGSWGTVFAQMLHENGEEVILWARRKEIVDLIN   54 (335)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred             EEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence            45555 899999999999999999999999987766543

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=94.43  E-value=0.075  Score=42.42  Aligned_cols=43  Identities=12%  Similarity=0.310  Sum_probs=34.9

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      +++++.+.|.| .|-+|..++..|++.|++|++++|++++.+++
T Consensus        19 Mm~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l   61 (358)
T 4e21_A           19 YFQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQAL   61 (358)
T ss_dssp             ---CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             hhcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH
Confidence            34556677776 79999999999999999999999999877654

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=94.40  E-value=0.076  Score=41.36  Aligned_cols=40  Identities=23%  Similarity=0.411  Sum_probs=34.0

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      +++.|.| .|.+|..++..|++.|++|++++|++++.++..
T Consensus        32 ~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~   71 (320)
T 4dll_A           32 RKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLA   71 (320)
T ss_dssp             SEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHH
Confidence            3566665 799999999999999999999999998877654

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=94.27  E-value=0.057  Score=41.20  Aligned_cols=38  Identities=21%  Similarity=0.308  Sum_probs=32.2

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      +-|.| .|.+|..++..|++.|++|++++|++++.++..
T Consensus         4 I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~   41 (287)
T 3pdu_A            4 YGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLV   41 (287)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHH
T ss_pred             EEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH
Confidence            44555 899999999999999999999999998776553

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=94.26  E-value=0.17  Score=38.92  Aligned_cols=36  Identities=22%  Similarity=0.397  Sum_probs=32.3

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCC--EEEEEeCChHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVD  118 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r~~~~~~  118 (147)
                      .+.|.|+ |.+|..++..|+..|.  +|++++++++.++
T Consensus         9 kI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~   46 (319)
T 1lld_A            9 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVE   46 (319)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHH
Confidence            6888886 9999999999999998  9999999987665

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=94.25  E-value=0.091  Score=40.49  Aligned_cols=35  Identities=20%  Similarity=0.259  Sum_probs=31.3

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      +++.|.||.|.||..++..|.+.|++|++++|+++
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~   56 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDW   56 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence            35778888999999999999999999999998764

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=94.24  E-value=0.07  Score=40.05  Aligned_cols=40  Identities=25%  Similarity=0.398  Sum_probs=33.4

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQ  122 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~-V~i~~r~~~~~~~~~~  122 (147)
                      .+.|.| .|.+|..++..|++.|++ |.+++|+++..++..+
T Consensus        12 ~i~iiG-~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~   52 (266)
T 3d1l_A           12 PIVLIG-AGNLATNLAKALYRKGFRIVQVYSRTEESARELAQ   52 (266)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHH
T ss_pred             eEEEEc-CCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHH
Confidence            567777 599999999999999998 8899999887766544

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=94.21  E-value=0.072  Score=43.90  Aligned_cols=54  Identities=17%  Similarity=0.355  Sum_probs=41.7

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      .++|.| .|-+|..+|+.|.++|++|++++.+++.++++.+    .++  ..++..|.++.
T Consensus         5 ~iiI~G-~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~----~~~--~~~i~Gd~~~~   58 (461)
T 4g65_A            5 KIIILG-AGQVGGTLAENLVGENNDITIVDKDGDRLRELQD----KYD--LRVVNGHASHP   58 (461)
T ss_dssp             EEEEEC-CSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHH----HSS--CEEEESCTTCH
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----hcC--cEEEEEcCCCH
Confidence            577887 6899999999999999999999999988765543    333  34566777663

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=94.19  E-value=0.13  Score=40.01  Aligned_cols=44  Identities=11%  Similarity=0.077  Sum_probs=36.7

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLR  125 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~l~  125 (147)
                      +++.|.|+ |.+|..++..|+..|. +|++.|+++++++....++.
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~   47 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLY   47 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHH
Confidence            36888997 9999999999999996 89999999887776555554

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=94.18  E-value=0.14  Score=42.66  Aligned_cols=60  Identities=20%  Similarity=0.179  Sum_probs=44.7

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH------HHHHHhCCeEEEEEc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ------SLREEFGEQHVVQNV  137 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~------~l~~~~~~~~~~~~~  137 (147)
                      .+.||++.|.| .|.||..+|+.+...|++|++++++.....+...      .+.+.....++++.+
T Consensus       254 ~l~GktVgIIG-~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~~~l~ell~~aDiVi~~  319 (479)
T 1v8b_A          254 LISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGDFFITC  319 (479)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEEC
T ss_pred             ccCCCEEEEEe-eCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEecCHHHHHhcCCEEEEC
Confidence            57899999998 7999999999999999999999999876433221      233334455555544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	147
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	2e-14
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	1e-13
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	1e-13
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	3e-13
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-13
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	3e-13
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	3e-13
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-13
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	6e-13
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	7e-13
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	7e-13
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	8e-13
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	9e-13
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	1e-12
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	1e-12
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	1e-12
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	1e-12
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	2e-12
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	2e-12
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	3e-12
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	4e-12
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	7e-12
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	7e-12
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	1e-11
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	1e-11
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	2e-11
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	2e-11
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	2e-11
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	2e-11
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	3e-11
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	4e-11
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	4e-11
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-11
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	6e-11
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	7e-11
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	9e-11
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	9e-11
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	1e-10
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	1e-10
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	1e-10
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	1e-10
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	2e-10
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-10
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	3e-10
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-10
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	5e-10
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	6e-10
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	6e-10
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	7e-10
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	7e-10
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	7e-10
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	7e-10
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	8e-10
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	8e-10
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	9e-10
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	9e-10
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	1e-09
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	1e-09
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-09
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	4e-09
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	6e-09
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	7e-09
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	7e-09
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	5e-08
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	7e-08
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	2e-07
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	1e-06
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	5e-06
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	9e-06
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	1e-05
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	1e-05
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	2e-05
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	2e-05
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	2e-04
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	3e-04
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	4e-04
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	6e-04
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	6e-04
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	7e-04
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	8e-04
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.001
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	0.001
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	0.001
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	0.001
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	0.002
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	0.002
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	0.002
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.002
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	0.002
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	0.003
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	0.003
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	0.004
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	0.004
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.004

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 65.9 bits (160), Expect = 2e-14
 Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 5/66 (7%)

Query: 74  REPMLPPY-----NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF 128
           ++ MLPP         ITG   G+G  +       G   +I SR  + + +  + +  + 
Sbjct: 14  QKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT 73

Query: 129 GEQHVV 134
           G +   
Sbjct: 74  GNKVHA 79

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 63.9 bits (155), Expect = 1e-13
 Identities = 17/52 (32%), Positives = 33/52 (63%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
            L+TG ++G+G+ +A+   +AG +V++ SR+ E    A Q L E++G + + 
Sbjct: 8   ALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMA 59

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 63.6 bits (154), Expect = 1e-13
 Identities = 18/53 (33%), Positives = 28/53 (52%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            L+TG+T GIG  +A+   K G  V +C+R  E + + ++ LRE   E     
Sbjct: 5   ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT 57

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 62.5 bits (151), Expect = 3e-13
 Identities = 14/53 (26%), Positives = 24/53 (45%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            L+TG+ +GIG A+A   +K G  V I   +     +    + +  G    V+
Sbjct: 4   ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVK 56

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 62.7 bits (152), Expect = 3e-13
 Identities = 14/53 (26%), Positives = 27/53 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            L+TG ++GIGY + +E    G +V  CSR+ + ++  +   R +  +     
Sbjct: 11  ALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASV 63

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 62.5 bits (151), Expect = 3e-13
 Identities = 14/53 (26%), Positives = 24/53 (45%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            L+TG+   IG A A    + G  + +   + E ++ A  S+RE+  E     
Sbjct: 8   CLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYV 60

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 62.4 bits (151), Expect = 3e-13
 Identities = 14/53 (26%), Positives = 28/53 (52%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            +ITG+  GIG  +A  F  AG +V++   +A+  +  V  +++  G+    +
Sbjct: 14  AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACR 66

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 62.4 bits (151), Expect = 3e-13
 Identities = 18/53 (33%), Positives = 28/53 (52%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            L+TG +KGIGYA+ +E    G  V  CSR+ + +D  ++  RE+        
Sbjct: 9   ALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSV 61

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.5 bits (149), Expect = 6e-13
 Identities = 13/53 (24%), Positives = 22/53 (41%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
           VLITG+  GIG   A EF K    +++   +   ++      +    + H   
Sbjct: 10  VLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV 62

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 61.6 bits (149), Expect = 7e-13
 Identities = 17/53 (32%), Positives = 27/53 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            L+TG+ +GIG  +AK   K+  +VI  SR+ +  DS V  ++    E     
Sbjct: 13  ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYA 65

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 61.6 bits (149), Expect = 7e-13
 Identities = 16/53 (30%), Positives = 26/53 (49%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
            +++TG  +GIG A  +    AG NV +  RSA       + + +EFG +   
Sbjct: 11  TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKA 63

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.6 bits (149), Expect = 8e-13
 Identities = 20/50 (40%), Positives = 27/50 (54%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
            ++TG   GIG A+ KE L+ G NV+I SR  ER+ SA   L+       
Sbjct: 15  AIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTK 64

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.2 bits (148), Expect = 9e-13
 Identities = 16/52 (30%), Positives = 25/52 (48%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
            L+TG+ +GIG A A+  L  G  V +   + E       +L E+F  Q  +
Sbjct: 6   ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTL 57

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 61.2 bits (148), Expect = 1e-12
 Identities = 17/53 (32%), Positives = 27/53 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
           V+ITGS+ GIG + A  F K G  V I  R+ +R++   Q + +       + 
Sbjct: 7   VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKIN 59

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.9 bits (147), Expect = 1e-12
 Identities = 19/68 (27%), Positives = 30/68 (44%)

Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 8   RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 67

Query: 134 VQNVMLAK 141
                +  
Sbjct: 68  YIAGTMED 75

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 60.8 bits (147), Expect = 1e-12
 Identities = 15/54 (27%), Positives = 29/54 (53%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            VL+TG TKGIG+A+ +EF   G  +  C+R+   ++  +   +++  +     
Sbjct: 10  TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSV 63

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 60.9 bits (147), Expect = 1e-12
 Identities = 14/52 (26%), Positives = 26/52 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
           VLITG   G+G A A      G  + +   S+E ++++  ++ E   +  V+
Sbjct: 7   VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVL 58

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 60.7 bits (147), Expect = 2e-12
 Identities = 20/55 (36%), Positives = 28/55 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNV 137
            +ITGS+ GIG A A  F + G  V I  R AER++   Q +      +  V +V
Sbjct: 8   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 62

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 60.4 bits (146), Expect = 2e-12
 Identities = 21/56 (37%), Positives = 31/56 (55%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNV 137
            V+ITGS+ GIG   A  F + G NV I  RS+ER++   Q + +    +  V +V
Sbjct: 7   TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 62

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.9 bits (145), Expect = 3e-12
 Identities = 12/52 (23%), Positives = 27/52 (51%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
            L+TG++ GIG A+A+  ++ G  V+ C+R+   ++      +       ++
Sbjct: 13  ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLI 64

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 59.7 bits (144), Expect = 4e-12
 Identities = 14/55 (25%), Positives = 23/55 (41%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNV 137
            +ITG   GIG   AK F++ G  V+I   + +       ++        V  +V
Sbjct: 9   AIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDV 63

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 58.5 bits (141), Expect = 7e-12
 Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 12/67 (17%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER------------VDSAVQSLREEFG 129
            VL+  +++GIG A+A    + G  V IC+R+ E             +   +  L E+  
Sbjct: 6   GVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKDLDLLFEKVK 65

Query: 130 EQHVVQN 136
           E  ++  
Sbjct: 66  EVDILVL 72

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.1 bits (142), Expect = 7e-12
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            L+TG  KGIG A+ ++  +    +V++ +R   R  +AVQ L+ E       Q
Sbjct: 6   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQ 59

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 58.2 bits (140), Expect = 1e-11
 Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVVQ 135
           V+ITGS+ G+G ++A  F      V++  RS E   +S ++ +++  GE   V+
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 57.8 bits (139), Expect = 1e-11
 Identities = 14/46 (30%), Positives = 23/46 (50%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
            +L+TG+  GIG A    F + G +++   R    +  AV +L  E
Sbjct: 7   TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAE 52

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 57.7 bits (139), Expect = 2e-11
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
           VLITG   G+G AL   F+  G  V +  +SAER+       
Sbjct: 8   VLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH 49

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 57.9 bits (139), Expect = 2e-11
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 83  VLITGSTKGIGYALAKEFLK---AGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
            ++TG+++G G ALA +  +    G  +++ +RS   +    + L  +  +  VV
Sbjct: 9   CVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVV 63

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 57.3 bits (138), Expect = 2e-11
 Identities = 17/55 (30%), Positives = 29/55 (52%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNV 137
            +ITG T GIG A+A +F++ G  V+I  R ++  + A +S+      Q    + 
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDS 63

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.3 bits (138), Expect = 2e-11
 Identities = 15/43 (34%), Positives = 22/43 (51%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
            VL+TG+ KGIG    +     G  V+  SR+   +DS V+  
Sbjct: 9   RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC 51

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 57.1 bits (137), Expect = 3e-11
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
            LITGS +GIG A A+ +++ G  V I   + E   +    +   
Sbjct: 8   ALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPA 52

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 56.7 bits (136), Expect = 4e-11
 Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVVQNVMLAK 141
            ++TGST GIG  +A      G ++++     A  ++     L  + G + +     L+K
Sbjct: 7   AVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK 66

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.5 bits (136), Expect = 4e-11
 Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 4/53 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
           V++TG  +GIG  + + F+ +G  V+IC +         ++L +E      + 
Sbjct: 9   VVVTGGGRGIGAGIVRAFVNSGARVVICDKDES----GGRALEQELPGAVFIL 57

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 56.2 bits (135), Expect = 5e-11
 Identities = 14/47 (29%), Positives = 22/47 (46%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF 128
            VLITG+  GIG A  + F K G  ++ C      +  A +++    
Sbjct: 7   AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP 53

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 56.2 bits (135), Expect = 6e-11
 Identities = 8/45 (17%), Positives = 18/45 (40%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
            L++G  +G+G +  +  +  G  V+      E   +    L + 
Sbjct: 9   ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA 53

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 56.2 bits (135), Expect = 7e-11
 Identities = 11/45 (24%), Positives = 15/45 (33%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
            L+TG   G+G  + K  L  G  V     +          L E 
Sbjct: 9   ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGER 53

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.8 bits (134), Expect = 9e-11
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
             L+TG+ KGIG    K    +G  V+  +R+   + S  +  
Sbjct: 7   RALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC 49

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 55.8 bits (134), Expect = 9e-11
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
            V+ITG  +G+G   A++ + AG  V++     E   +  + L
Sbjct: 7   TVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL 49

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 55.5 bits (133), Expect = 1e-10
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 7/60 (11%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDN-------VIICSRSAERVDSAVQSLREEFGEQHVVQ 135
           +LITG+ KGIG A+A EF +A  +       +++ SR+A  ++      R E      + 
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 63

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 55.4 bits (133), Expect = 1e-10
 Identities = 9/52 (17%), Positives = 20/52 (38%), Gaps = 1/52 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
            ++T      G   A    +AG  V     S ++ D  +++  E + +   +
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKD-ELEAFAETYPQLKPM 53

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 55.5 bits (133), Expect = 1e-10
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVVQ 135
            L+TG+ +GIG  +A E  + G  VI+    S E  +  V ++++   +   V+
Sbjct: 21  ALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK 74

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 55.1 bits (131), Expect = 1e-10
 Identities = 13/65 (20%), Positives = 23/65 (35%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG 142
           V + G T  +G  LA      G  +++ SR  E+ ++     R   G+  +         
Sbjct: 3   VALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAA 62

Query: 143 MKWQI 147
               I
Sbjct: 63  EACDI 67

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 55.1 bits (132), Expect = 2e-10
 Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVVQ 135
            L TG+ +GIG  +A E  + G +V++    S++  +  V  L++   +   +Q
Sbjct: 9   ALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQ 62

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 54.4 bits (130), Expect = 2e-10
 Identities = 13/46 (28%), Positives = 21/46 (45%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF 128
            L+TG+++GIG A+A+     G  VI  + S     +    L    
Sbjct: 7   ALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANG 52

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 53.9 bits (128), Expect = 3e-10
 Identities = 13/57 (22%), Positives = 28/57 (49%), Gaps = 4/57 (7%)

Query: 82  NVLITGSTKGIGYALAKEFL---KAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
           ++LITG  +G+G  L K  L   +   ++    R+ E+    ++ L +     H+++
Sbjct: 4   SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK-ELEDLAKNHSNIHILE 59

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 53.6 bits (128), Expect = 5e-10
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVVQ 135
           V++TG+++GIG A+A    KAG  V++  +RSA+  +   + +    G+     
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFG 57

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 53.7 bits (128), Expect = 5e-10
 Identities = 10/35 (28%), Positives = 16/35 (45%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER 116
            V++ G    +G A+ + F K G  V+    SA  
Sbjct: 4   KVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAND 38

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 53.5 bits (127), Expect = 6e-10
 Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 1/66 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAK 141
           VL+TG T G+G  +A+   + G  ++++ SRS    D A + + E               
Sbjct: 12  VLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDV 71

Query: 142 GMKWQI 147
             +  +
Sbjct: 72  TDRESV 77

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 53.3 bits (128), Expect = 6e-10
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 5/56 (8%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNV 137
            VL+TG  +GIG A+A+ F + G  V +C    E  + A     E  G      ++
Sbjct: 7   GVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA-----EAIGGAFFQVDL 57

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 53.3 bits (128), Expect = 7e-10
 Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
            +ITG   GIG A+A+ F   G ++ I          A  ++R        V+
Sbjct: 8   AVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNLGRRVLTVK 58

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 53.5 bits (127), Expect = 7e-10
 Identities = 13/66 (19%), Positives = 26/66 (39%), Gaps = 1/66 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVVQNVMLAK 141
            L+TG+ K +G ++A+     G  V +   RSA   ++   +L        +     L+ 
Sbjct: 5   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64

Query: 142 GMKWQI 147
                +
Sbjct: 65  VATAPV 70

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (127), Expect = 7e-10
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 4/54 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQN 136
           +++T + +GIG A A  F + G  VI    +       +Q L +  G Q  V +
Sbjct: 9   IILTAAAQGIGQAAALAFAREGAKVIATDINES----KLQELEKYPGIQTRVLD 58

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 53.3 bits (127), Expect = 7e-10
 Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 6/57 (10%)

Query: 80  PYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREEFGEQHVV 134
           P +V++TG+ +GIG  L ++ +K  +  ++I  +R  E+       L+     +  V
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEK----ATELKSIKDSRVHV 55

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 53.3 bits (127), Expect = 8e-10
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHVV 134
            +ITG  + IG+++A    + G  V++  R +E      V  L        V+
Sbjct: 4   AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVL 56

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 53.0 bits (126), Expect = 8e-10
 Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 3/60 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG 142
           ++I+G   GIG A  K    AG  ++        V   +  L    G +  + +V+    
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV---IADLSTAEGRKQAIADVLAKCS 60

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.0 bits (126), Expect = 9e-10
 Identities = 9/64 (14%), Positives = 19/64 (29%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG 142
            +ITG   G+G A A+  +  G + ++        ++  + L                  
Sbjct: 8   AVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQ 67

Query: 143 MKWQ 146
               
Sbjct: 68  TALA 71

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 53.2 bits (126), Expect = 9e-10
 Identities = 12/67 (17%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 82  NVLITG--STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVML 139
             LI G  + K I Y +A+     G  +     + E ++  V+ + +E    +V +  + 
Sbjct: 7   KGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLN-ESLEKRVRPIAQELNSPYVYELDVS 65

Query: 140 AKGMKWQ 146
            +     
Sbjct: 66  KEEHFKS 72

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 52.4 bits (125), Expect = 1e-09
 Identities = 12/40 (30%), Positives = 19/40 (47%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121
           +VL+TG  +GIG A+A+     G  V +  R +       
Sbjct: 9   SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF 48

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 52.3 bits (125), Expect = 1e-09
 Identities = 8/53 (15%), Positives = 16/53 (30%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVV 134
           NV+   +  GIG   ++E +K      +     E   +  +            
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITF 59

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 51.4 bits (122), Expect = 3e-09
 Identities = 9/56 (16%), Positives = 14/56 (25%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNV 137
            VL+ G    +G    + F      V           SA   ++           V
Sbjct: 4   RVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQV 59

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 51.3 bits (121), Expect = 4e-09
 Identities = 6/67 (8%), Positives = 20/67 (29%), Gaps = 2/67 (2%)

Query: 82  NVLITG--STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVML 139
            +L++G  +   I + +A+   + G  +++      R+   +            +     
Sbjct: 8   RILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNE 67

Query: 140 AKGMKWQ 146
                  
Sbjct: 68  EHLASLA 74

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 50.9 bits (120), Expect = 6e-09
 Identities = 12/53 (22%), Positives = 20/53 (37%), Gaps = 2/53 (3%)

Query: 83  VLITG--STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
             I G     G G+A+AK    AG  +++ +             R +F +  V
Sbjct: 11  AFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRV 63

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 50.7 bits (121), Expect = 7e-09
 Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 5/63 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-----RVDSAVQSLREEFGEQHVVQNV 137
           VL+TG+  G+G A A  F + G  V++     +     +  SA   + EE   +      
Sbjct: 10  VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVA 69

Query: 138 MLA 140
              
Sbjct: 70  NYD 72

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 50.2 bits (119), Expect = 7e-09
 Identities = 11/36 (30%), Positives = 15/36 (41%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118
            L+TG   G+G A A      G  V++     E  D
Sbjct: 4   ALVTGGASGLGRAAALALKARGYRVVVLDLRREGED 39

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (114), Expect = 5e-08
 Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 6/59 (10%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSA------ERVDSAVQSLREEFGEQHVVQ 135
           VLITG + GIG  LA               +        R+  A ++L    G    +Q
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 47.6 bits (112), Expect = 7e-08
 Identities = 12/59 (20%), Positives = 27/59 (45%), Gaps = 3/59 (5%)

Query: 82  NVLITG--STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVM 138
            +L+TG  S   I Y +A+   + G  +    ++ +++   V+    + G   V+Q  +
Sbjct: 7   RILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLQCDV 64

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 46.4 bits (108), Expect = 2e-07
 Identities = 11/55 (20%), Positives = 17/55 (30%), Gaps = 2/55 (3%)

Query: 83  VLITG--STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQ 135
             I G   T G G+ +AKE  K    +I                  +F    ++ 
Sbjct: 5   CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIID 59

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 44.1 bits (103), Expect = 1e-06
 Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 3/53 (5%)

Query: 82  NVLITG--STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
             L+ G  + + +G+A+A +  +AG  V +  ++ ER+    + L E  G   
Sbjct: 10  KALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQA-ERLRPEAEKLAEALGGAL 61

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 42.5 bits (98), Expect = 5e-06
 Identities = 10/51 (19%), Positives = 16/51 (31%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           VLI G T  IG  +    +  G    +  R     +     +   F +   
Sbjct: 6   VLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGA 56

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 41.9 bits (97), Expect = 9e-06
 Identities = 8/57 (14%), Positives = 21/57 (36%), Gaps = 2/57 (3%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVM 138
            + + G+T   G +L +     G +V     S + + +  + L+           ++
Sbjct: 5   TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQAIPNVTLFQGPLL 59

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 41.7 bits (96), Expect = 1e-05
 Identities = 10/36 (27%), Positives = 20/36 (55%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118
           VL+TG+   +   + ++ L+ G  V   +RSA ++ 
Sbjct: 14  VLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLA 49

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (94), Expect = 1e-05
 Identities = 9/35 (25%), Positives = 16/35 (45%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER 116
            + I G+T   G     + ++AG  V +  R + R
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSR 39

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 41.0 bits (94), Expect = 2e-05
 Identities = 15/65 (23%), Positives = 24/65 (36%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAK 141
            V +TG T   G  L+      G  V   S +A  V S  ++ R   G Q  + ++    
Sbjct: 10  RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQN 69

Query: 142 GMKWQ 146
            +   
Sbjct: 70  KLLES 74

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 40.9 bits (94), Expect = 2e-05
 Identities = 12/55 (21%), Positives = 23/55 (41%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNV 137
           +L+ G+T  IG  +AK  L  G    +  R +    ++ ++   E  +      V
Sbjct: 6   ILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIV 60

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 37.9 bits (87), Expect = 2e-04
 Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 1/58 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLA 140
           V I G    +G A+ ++  + GD  ++     E ++        +F     +  V LA
Sbjct: 5   VFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE-LNLLDSRAVHDFFASERIDQVYLA 61

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.1 bits (84), Expect = 3e-04
 Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII--CSRSAERVD 118
           VL+TG++   G  + K+  +  D  +     RSA+  +
Sbjct: 6   VLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE 43

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 37.2 bits (85), Expect = 4e-04
 Identities = 15/62 (24%), Positives = 23/62 (37%)

Query: 71  SVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
            +++E    P   LITG    IG  L +  LK    V+     A      +  +R    E
Sbjct: 7   ELRKELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSE 66

Query: 131 QH 132
           + 
Sbjct: 67  KQ 68

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 36.5 bits (83), Expect = 6e-04
 Identities = 13/49 (26%), Positives = 21/49 (42%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
            VL+TG +  IG     + L+ G +VII         S +  +    G+
Sbjct: 2   RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK 50

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 36.3 bits (82), Expect = 6e-04
 Identities = 8/32 (25%), Positives = 13/32 (40%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRS 113
            +LITG+   +G  + K+       VI     
Sbjct: 3   KILITGANGQLGREIQKQLKGKNVEVIPTDVQ 34

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.2 bits (82), Expect = 7e-04
 Identities = 11/31 (35%), Positives = 12/31 (38%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSR 112
             LITG T   G  L +  L  G  V    R
Sbjct: 3   IALITGITGQDGSYLTEFLLGKGYEVHGLIR 33

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 36.1 bits (82), Expect = 8e-04
 Identities = 11/30 (36%), Positives = 13/30 (43%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSR 112
            L+TG T   G  LAK  L+ G  V     
Sbjct: 3   ALVTGITGQDGAYLAKLLLEKGYRVHGLVA 32

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 35.5 bits (81), Expect = 0.001
 Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 6/53 (11%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIIC------SRSAERVDSAVQSLREEF 128
            +LITG    IG A+ +  +K   + ++       + + E +    +S R  F
Sbjct: 2   KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNF 54

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (81), Expect = 0.001
 Identities = 12/62 (19%), Positives = 22/62 (35%), Gaps = 4/62 (6%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSR----SAERVDSAVQSLREEFGEQHVVQNV 137
            +LITG    +G  L  + +  G  V +           V+  +     E     VV+ +
Sbjct: 3   RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 62

Query: 138 ML 139
            +
Sbjct: 63  YI 64

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 35.3 bits (79), Expect = 0.001
 Identities = 12/70 (17%), Positives = 23/70 (32%), Gaps = 5/70 (7%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-----RVDSAVQSLREEFGEQHVVQN 136
           N+L+ G T  +G+ L +     G+ + +   S E          V     +     +V  
Sbjct: 2   NILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNA 61

Query: 137 VMLAKGMKWQ 146
                  K +
Sbjct: 62  AAHTAVDKAE 71

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 35.2 bits (80), Expect = 0.001
 Identities = 12/30 (40%), Positives = 14/30 (46%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSR 112
            LITG T   G  LA+  L+ G  V    R
Sbjct: 4   ALITGVTGQDGSYLAEFLLEKGYEVHGIKR 33

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 35.3 bits (79), Expect = 0.002
 Identities = 10/48 (20%), Positives = 16/48 (33%), Gaps = 1/48 (2%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEF 128
            VLI G    IG  L +  L+     V      ++ +   +      F
Sbjct: 2   RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHF 49

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 35.1 bits (79), Expect = 0.002
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII 109
           +LITG    +G  LA   L  G ++I+
Sbjct: 3   LLITGGCGFLGSNLASFALSQGIDLIV 29

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 34.9 bits (79), Expect = 0.002
 Identities = 11/67 (16%), Positives = 23/67 (34%), Gaps = 1/67 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVVQNVMLA 140
            + ITG+   I   +A+     G  VI    +  E +   +        +  V++N +  
Sbjct: 17  KISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKV 76

Query: 141 KGMKWQI 147
                 +
Sbjct: 77  TEGVDHV 83

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (78), Expect = 0.002
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII 109
           VL+TG    IG     E L+AG   ++
Sbjct: 5   VLVTGGAGYIGSHTVLELLEAGYLPVV 31

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 34.9 bits (78), Expect = 0.002
 Identities = 8/27 (29%), Positives = 11/27 (40%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII 109
           V++ G     G+A A    K    V I
Sbjct: 4   VMVIGGDGYCGWATALHLSKKNYEVCI 30

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 34.6 bits (78), Expect = 0.003
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII 109
           VL+TG    IG     E ++ G + ++
Sbjct: 4   VLVTGGAGYIGSHTVVELIENGYDCVV 30

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 34.2 bits (76), Expect = 0.003
 Identities = 7/28 (25%), Positives = 12/28 (42%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC 110
           +++TG    IG  + K     G   I+ 
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILV 29

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (77), Expect = 0.004
 Identities = 16/60 (26%), Positives = 25/60 (41%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG 142
            LITG T   G  LA+  L+ G  V    R +   ++       +  + H+  N+ L  G
Sbjct: 4   ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYG 63

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 34.0 bits (76), Expect = 0.004
 Identities = 8/34 (23%), Positives = 13/34 (38%)

Query: 80  PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS 113
           P  VL+ G+T   G  L    L       + + +
Sbjct: 2   PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPA 35

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 34.2 bits (77), Expect = 0.004
 Identities = 6/31 (19%), Positives = 11/31 (35%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSR 112
           N+++TG    IG            +V +   
Sbjct: 4   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVL 34

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	147
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.59
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.57
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.53
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.53
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.51
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.5
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.5
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.5
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.49
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.49
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.48
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.47
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.47
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.46
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.46
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.45
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.44
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.44
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.44
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.43
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.43
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.42
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.42
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.41
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.41
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.41
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.41
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.4
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.39
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.38
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.38
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.38
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.37
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.37
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.37
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.37
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.36
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.35
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.33
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.3
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.3
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.28
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.27
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.26
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.24
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.2
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.2
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.2
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.19
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.17
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.17
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.15
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.14
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.13
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.13
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.13
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.07
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.05
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.04
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.03
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	98.87
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	98.83
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	98.8
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	98.78
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	98.76
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	98.73
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	98.69
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.65
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	98.62
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	98.51
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	98.41
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	98.35
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	98.34
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.31
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	98.25
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	98.23
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.22
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.19
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.17
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	98.14
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	98.13
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.11
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	98.08
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	98.03
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	98.02
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.86
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	97.69
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	97.67
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	97.61
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.56
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	97.52
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	97.51
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.5
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	97.5
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	97.49
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	97.41
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	97.4
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.32
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.31
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.29
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.28
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.24
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	97.22
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.19
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.17
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.15
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	97.15
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.15
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	97.06
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.05
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.03
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.0
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	96.97
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.89
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.88
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	96.85
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.84
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	96.8
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.79
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.79
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.77
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.73
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.7
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.69
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.63
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.61
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	96.54
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.51
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.43
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.39
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	96.38
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.38
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.37
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.31
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	96.25
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.25
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.24
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.22
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.13
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	96.1
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.08
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	95.97
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.96
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	95.95
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	95.9
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	95.9
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	95.89
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	95.84
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	95.74
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.72
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.45
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	95.43
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	95.39
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.36
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	95.3
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	95.25
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	95.25
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.23
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	95.21
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.19
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.1
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.07
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.02
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	94.99
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	94.96
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	94.9
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.86
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.78
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.7
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.68
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.63
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	94.6
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.41
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.39
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	94.32
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	94.32
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.26
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.25
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	94.17
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	94.06
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	94.04
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.01
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	93.95
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	93.93
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.92
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	93.88
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	93.86
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	93.72
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	93.71
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.63
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	93.59
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	93.58
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	93.52
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	93.48
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	93.41
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	93.41
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.26
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	93.22
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.18
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	92.94
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	92.93
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	92.84
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	92.84
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	92.73
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	92.7
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	92.66
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	92.6
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	92.56
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	92.46
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	92.45
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	92.35
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	92.33
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	92.3
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	92.28
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	92.27
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	92.25
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	92.21
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	91.94
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	91.87
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	91.84
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	91.78
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	91.59
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	91.59
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	91.55
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	91.05
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	90.95
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	90.71
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	90.48
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	90.21
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	89.82
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	89.8
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	89.76
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	89.75
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	89.41
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	89.34
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	89.33
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	89.24
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	89.16
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	89.12
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	88.85
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	88.41
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	88.34
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	88.33
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	88.13
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	88.0
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	87.82
d2afhe1	289	Nitrogenase iron protein {Azotobacter vinelandii [	87.77
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	87.74
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	87.56
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	87.43
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	87.42
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	87.29
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	87.26
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	86.97
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	86.84
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	86.59
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	86.44
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	86.31
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	86.07
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	85.81
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	84.78
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	84.54
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	84.51
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	84.43
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	83.98
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	83.79
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	83.6
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	83.59
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	83.49
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	83.43
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	83.34
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	83.2
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	82.52
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	82.5
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	82.44
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	82.1
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	81.73
d1ihua1	296	Arsenite-translocating ATPase ArsA {Escherichia co	81.7
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	81.63
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	81.26
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	80.77
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	80.48
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	80.47
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	80.12
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	80.04

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.59  E-value=2.3e-15  Score=115.80  Aligned_cols=76  Identities=13%  Similarity=0.201  Sum_probs=69.2

Q ss_pred             ccCCCCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           70 SSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        70 ~~~~~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +++.+.++++||+++||||++|||+++|++|+++|++|++++|+.+++++.++++.++.+.....+.+|++++.++
T Consensus        15 ~~~~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v   90 (294)
T d1w6ua_          15 KAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMV   90 (294)
T ss_dssp             SCCSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHH
T ss_pred             ccCCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHH
Confidence            3456677999999999999999999999999999999999999999999999999998888888999999986643

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.57  E-value=4.2e-15  Score=112.80  Aligned_cols=70  Identities=26%  Similarity=0.416  Sum_probs=64.7

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      |+|+||+++||||++|||+++|+.|+++|++|++++|+++++++..+++.+.++.....+.+|++++.++
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v   70 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEV   70 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHH
Confidence            5789999999999999999999999999999999999999999999999888887788889999987654

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.53  E-value=5.1e-15  Score=112.58  Aligned_cols=71  Identities=23%  Similarity=0.330  Sum_probs=65.1

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .++++||+++||||++|||+++|+.|+++|++|++++|+.+++++..+++.++++.....+.+|++++.++
T Consensus         4 ~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v   74 (260)
T d1h5qa_           4 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIV   74 (260)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred             cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHH
Confidence            35789999999999999999999999999999999999999999999999888888788899999987654

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.53  E-value=1.4e-14  Score=110.32  Aligned_cols=70  Identities=24%  Similarity=0.425  Sum_probs=62.7

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .|+|+||+++||||++|||+++|+.|+++|++|++++|++++++++.+++.+. +.....+.+|++++.++
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~-g~~~~~~~~Dv~~~~~v   72 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK-GFKVEASVCDLSSRSER   72 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCEEEEEECCTTCHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCCceEEEeeCCCHHHH
Confidence            47899999999999999999999999999999999999999999999998775 45567789999986654

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=1.9e-14  Score=109.42  Aligned_cols=71  Identities=18%  Similarity=0.250  Sum_probs=63.4

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhC-CeEEEEEcccCCCCCc
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVVQNVMLAKGMKW  145 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~-~~~~~~~~dv~~~~~~  145 (147)
                      +.+++||+++||||++|||+++|+.|+++|++|++++|++++++++++++.+... ...+.+++|+++++++
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v   76 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDI   76 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHH
Confidence            3458999999999999999999999999999999999999999999999998764 3567789999997654

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.50  E-value=1.6e-14  Score=109.78  Aligned_cols=70  Identities=21%  Similarity=0.288  Sum_probs=62.3

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .+.|+||+++||||++|||+++|+.|+++|++|++++|++++++++.+++.+.. .....+.+|++++.++
T Consensus         6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g-~~~~~~~~Dvs~~~~~   75 (255)
T d1fmca_           6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG-GQAFACRCDITSEQEL   75 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcC-CcEEEEEccCCCHHHH
Confidence            356899999999999999999999999999999999999999999999998764 4467789999987654

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.50  E-value=3.1e-14  Score=108.31  Aligned_cols=70  Identities=30%  Similarity=0.429  Sum_probs=61.9

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .|+|+||+++||||++|||++++++|+++|++|++++|++++++++.+++.+. +.....+.+|++++.++
T Consensus         1 ~f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~-~~~~~~~~~D~s~~~~~   70 (258)
T d1ae1a_           1 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK-GLNVEGSVCDLLSRTER   70 (258)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCCceEEEeecCCHHHH
Confidence            36899999999999999999999999999999999999999999998888765 44566778999987654

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.50  E-value=2.7e-14  Score=108.71  Aligned_cols=71  Identities=24%  Similarity=0.270  Sum_probs=63.3

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +.|+|+||+++||||++|||+++|+.|+++|++|++++|+++++++..+++.+..+ ....+.+|++++.++
T Consensus         2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~-~~~~~~~Dv~~~~~v   72 (259)
T d1xq1a_           2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF-QVTGSVCDASLRPER   72 (259)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHH
T ss_pred             CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEeccCCCHHHH
Confidence            46789999999999999999999999999999999999999999999999887654 467889999986543

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.49  E-value=2.8e-14  Score=108.06  Aligned_cols=71  Identities=25%  Similarity=0.230  Sum_probs=63.2

Q ss_pred             CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ..|.+++|+++||||++|||+++|+.|+++|++|++++|+++.++++.+++.+. +.....+.+|++|+.++
T Consensus         4 ~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~-g~~~~~~~~Dvt~~~~v   74 (251)
T d2c07a1           4 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF-GYESSGYAGDVSKKEEI   74 (251)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT-TCCEEEEECCTTCHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHH
Confidence            567899999999999999999999999999999999999999999999998764 44567889999987654

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=4.2e-14  Score=106.91  Aligned_cols=69  Identities=20%  Similarity=0.205  Sum_probs=61.9

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .+++||+++||||++|||+++|++|+++|++|++++|++++++++.+++.+. +.....+.+|++|.+++
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~-~~~~~~~~~Dvs~~~~v   71 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL-GAKVHTFVVDCSNREDI   71 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEeeCCCHHHH
Confidence            4689999999999999999999999999999999999999999999999865 44567889999997654

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=6.1e-14  Score=106.89  Aligned_cols=66  Identities=26%  Similarity=0.320  Sum_probs=60.9

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      |+||+++||||++|||+++|+.|+++|++|++++|+++.++++.+++....+.....+.+|+.+..
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~   77 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT   77 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHH
Confidence            899999999999999999999999999999999999999999999988888887888888887643

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.47  E-value=5.6e-14  Score=106.84  Aligned_cols=69  Identities=19%  Similarity=0.251  Sum_probs=61.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCC-eEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE-QHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~-~~~~~~~dv~~~~~~  145 (147)
                      .|+||+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.+..++ ....+.+|++|+.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v   70 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQV   70 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHH
Confidence            478999999999999999999999999999999999999999998988876554 466789999987654

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.47  E-value=3.8e-14  Score=107.65  Aligned_cols=69  Identities=25%  Similarity=0.399  Sum_probs=61.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~-~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +|+||+++||||++|||+++|++|+++|++|++++|+ .+.+++..+++.+.++.....+.+|++|+.++
T Consensus         1 ~L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v   70 (260)
T d1x1ta1           1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAV   70 (260)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHH
T ss_pred             CCCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHH
Confidence            4789999999999999999999999999999999997 46778888888888887788899999987654

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.46  E-value=3.5e-14  Score=108.55  Aligned_cols=70  Identities=30%  Similarity=0.320  Sum_probs=61.1

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhC--CeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG--EQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~--~~~~~~~~dv~~~~~~  145 (147)
                      +.|+||+++||||++|||+++|+.|+++|++|++++|++++++++.+++.+...  .....+.+|++++.++
T Consensus         1 prL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v   72 (272)
T d1xkqa_           1 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQ   72 (272)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHH
T ss_pred             CCCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHH
Confidence            468999999999999999999999999999999999999999999998876532  2367889999987654

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.46  E-value=6e-14  Score=106.69  Aligned_cols=68  Identities=21%  Similarity=0.230  Sum_probs=60.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .|+||+++||||++|||+++++.|+++|++|++++|+++.++++.+++.+. +.....+.+|++++.++
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~-g~~~~~~~~Dv~~~~~v   69 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK-GVEARSYVCDVTSEEAV   69 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-TSCEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHH
Confidence            579999999999999999999999999999999999999999998888765 44467789999987654

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.45  E-value=6.8e-14  Score=106.14  Aligned_cols=66  Identities=24%  Similarity=0.364  Sum_probs=57.2

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +.|+||+++||||++|||+++|+.|+++|++|++++|+++.++++.+++    +.....+.+|++++.++
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----~~~~~~~~~Dvt~~~~v   66 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI----GPAACAIALDVTDQASI   66 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH----CTTEEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----CCceEEEEeeCCCHHHH
Confidence            3589999999999999999999999999999999999998888777665    44567788999986654

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.44  E-value=9.1e-14  Score=105.72  Aligned_cols=69  Identities=26%  Similarity=0.268  Sum_probs=60.8

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhC--CeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG--EQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~--~~~~~~~~dv~~~~~~  145 (147)
                      .|+||+++||||++|||+++|++|+++|++|++++|+++.++++.+++.+...  .....+.+|++++.++
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v   72 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQ   72 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHH
Confidence            47999999999999999999999999999999999999999999999987643  2367889999987654

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=1.6e-13  Score=106.34  Aligned_cols=70  Identities=30%  Similarity=0.461  Sum_probs=62.0

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHh----CCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF----GEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~----~~~~~~~~~dv~~~~~~  145 (147)
                      ..|+||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+    +.....+.+|++|+.++
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v   81 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEV   81 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHH
Confidence            46899999999999999999999999999999999999999999999998753    34567889999987654

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.44  E-value=1.3e-13  Score=104.47  Aligned_cols=66  Identities=27%  Similarity=0.428  Sum_probs=59.1

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .||+++||||++|||+++|+.|+++|++|++++|+++.+++..+++.+. +.....+.+|++|+.++
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~-g~~~~~~~~Dvs~~~~v   66 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA-GVEADGRTCDVRSVPEI   66 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEeecCCHHHH
Confidence            4899999999999999999999999999999999999999999999765 44567889999987654

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.43  E-value=1.2e-13  Score=105.67  Aligned_cols=69  Identities=25%  Similarity=0.289  Sum_probs=60.8

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCC--eEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE--QHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~--~~~~~~~dv~~~~~~  145 (147)
                      .|+||+++||||++|||+++|+.|+++|++|++++|++++++++.+++.+....  ....+.+|++++.++
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v   71 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQ   71 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHH
Confidence            478999999999999999999999999999999999999999999999876432  367889999987654

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.43  E-value=9.3e-14  Score=105.88  Aligned_cols=67  Identities=21%  Similarity=0.270  Sum_probs=58.1

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .|+||+++||||++|||+++|++|+++|++|++++|+++.++++.+++... + ...++.+|++|+.++
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~-~-~~~~~~~Dv~~~~~v   69 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP-D-VISFVHCDVTKDEDV   69 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-T-TEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC-C-ceEEEEccCCCHHHH
Confidence            589999999999999999999999999999999999999999888887542 2 355678999987654

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.42  E-value=1.3e-13  Score=104.30  Aligned_cols=69  Identities=20%  Similarity=0.292  Sum_probs=61.4

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHH---CCCEEEEEeCChHHHHHHHHHHHHHhCC-eEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLK---AGDNVIICSRSAERVDSAVQSLREEFGE-QHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~---~Ga~V~i~~r~~~~~~~~~~~l~~~~~~-~~~~~~~dv~~~~~~  145 (147)
                      .|+||+++||||++|||+++|++|++   +|++|++++|+++.++++.+++.+.+++ ....+.+|++++.++
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v   75 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGV   75 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHH
Confidence            58899999999999999999999986   7999999999999999999999887655 466789999986543

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.42  E-value=1.6e-13  Score=104.50  Aligned_cols=69  Identities=23%  Similarity=0.333  Sum_probs=58.3

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH-HHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~-~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ++|+||+++||||++|||+++|++|+++|++|++++|+.+ .+++..+++.+. +.....+.+|++++.++
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-g~~~~~~~~Dvt~~~~v   72 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV-GGEAIAVKGDVTVESDV   72 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCEEEEEECCTTSHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHH
Confidence            3689999999999999999999999999999999999864 567777777654 55677889999987654

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.41  E-value=1.2e-13  Score=104.60  Aligned_cols=67  Identities=28%  Similarity=0.401  Sum_probs=58.2

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .|+||+++||||++|||+++|+.|+++|++|++++|+++.++++.+++..  +.....+.+|++|+.++
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v   69 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT--PDQIQFFQHDSSDEDGW   69 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--TTTEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC--CCcEEEEEccCCCHHHH
Confidence            58999999999999999999999999999999999999999888887743  34467788999986654

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.41  E-value=1.2e-13  Score=104.96  Aligned_cols=65  Identities=25%  Similarity=0.425  Sum_probs=55.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +|+||+++||||++|||+++|++|+++|++|++++|+++++++..+++    +.....+.+|++++.++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v   66 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----GDAARYQHLDVTIEEDW   66 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----GGGEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----CCceEEEEcccCCHHHH
Confidence            689999999999999999999999999999999999998887666554    44466778888876544

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=1.3e-13  Score=104.31  Aligned_cols=67  Identities=24%  Similarity=0.338  Sum_probs=59.3

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhC-CeEEEEEcccCCCCCc
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVVQNVMLAKGMKW  145 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~-~~~~~~~~dv~~~~~~  145 (147)
                      +||+++||||++|||+++|+.|+++|++|++++|+.+++++..+++.+.++ .....+.+|++++.++
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v   69 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQL   69 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHH
Confidence            699999999999999999999999999999999999999999888877643 3467789999987654

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.41  E-value=1.7e-13  Score=103.30  Aligned_cols=65  Identities=20%  Similarity=0.218  Sum_probs=55.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +|+||+++||||++|||+++|+.|+++|++|++++|+++.++++.+++.    .....+.+|++++.++
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~----~~~~~~~~Dv~~~~~v   65 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG----ANGKGLMLNVTDPASI   65 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG----GGEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----CCCcEEEEEecCHHHh
Confidence            5799999999999999999999999999999999999998887776663    3356678898886543

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.40  E-value=2.4e-13  Score=104.09  Aligned_cols=66  Identities=27%  Similarity=0.305  Sum_probs=54.7

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ++|+||+++||||++|||+++|+.|+++|++|++++|++++++++.+++    +.....+.+|++++.++
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~----~~~~~~~~~Dv~~~~~~   66 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH----GDNVLGIVGDVRSLEDQ   66 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----GGGEEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----CCCeeEEecccccHHHH
Confidence            3589999999999999999999999999999999999988876655443    44567778888876543

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.39  E-value=2.2e-13  Score=102.89  Aligned_cols=65  Identities=15%  Similarity=0.324  Sum_probs=55.8

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .|+||+++|||+++|||+++|+.|+++|++|++++|++++++++.+++    ++....+.+|++|+.++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v   67 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL----ADAARYVHLDVTQPAQW   67 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----GGGEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----hCcceEEEeecCCHHHH
Confidence            589999999999999999999999999999999999998887776665    33456778898886543

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=2.6e-13  Score=102.30  Aligned_cols=65  Identities=28%  Similarity=0.284  Sum_probs=54.3

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +.|+||+++|||+++|||+++|+.|+++|++|++++|++++++++.+++    ++ ...+.+|++|+..+
T Consensus         3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~----~~-~~~~~~Dv~d~~~v   67 (244)
T d1pr9a_           3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC----PG-IEPVCVDLGDWEAT   67 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TT-CEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc----CC-CeEEEEeCCCHHHH
Confidence            4689999999999999999999999999999999999998887766554    33 34567888876543

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.38  E-value=4.6e-13  Score=101.33  Aligned_cols=64  Identities=22%  Similarity=0.273  Sum_probs=57.2

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      |+++||||++|||+++|++|+++|++|++++|+++.++++.+++.+.. .....+.+|++|+.++
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g-~~~~~~~~Dv~~~~~v   65 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG-GHAVAVKVDVSDRDQV   65 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHH
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEEeeCCCHHHH
Confidence            789999999999999999999999999999999999999999998754 4467789999987654

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.38  E-value=3.4e-13  Score=102.20  Aligned_cols=65  Identities=22%  Similarity=0.361  Sum_probs=55.9

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .|+||+++||||++|||+++++.|+++|++|++++|+++.++++.+++    +.....+.+|++++.++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~~   67 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----GERSMFVRHDVSSEADW   67 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----CTTEEEECCCTTCHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----CCCeEEEEeecCCHHHH
Confidence            589999999999999999999999999999999999998887776665    44567778888886543

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.37  E-value=6.7e-13  Score=100.50  Aligned_cols=68  Identities=26%  Similarity=0.354  Sum_probs=56.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEe-CChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~-r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .|.||+++||||++|||+++|+.|+++|++|++.+ ++++.++++.+++.+. +.....+++|++|+.++
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~-g~~~~~~~~D~~~~~~v   71 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL-GAQGVAIQADISKPSEV   71 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCTTSHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHc-CCCceEecCCCCCHHHH
Confidence            58999999999999999999999999999999875 4555567777777654 54567899999986654

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.37  E-value=3.2e-13  Score=101.74  Aligned_cols=63  Identities=27%  Similarity=0.365  Sum_probs=48.9

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      +.|+||+++||||++|||+++|+.|+++|++|++++|+++.+++..+++    +  ...+.+|++|+.+
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~----~--~~~~~~Dv~~~~~   63 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV----G--AHPVVMDVADPAS   63 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----T--CEEEECCTTCHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----C--CeEEEEecCCHHH
Confidence            3589999999999999999999999999999999999988776554433    1  2234555555443

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.37  E-value=3.3e-13  Score=101.61  Aligned_cols=64  Identities=22%  Similarity=0.214  Sum_probs=53.2

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      ++|+||+++|||+++|||+++++.|+++|++|++++|++++++++.+++    ++ ...+.+|++|+..
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----~~-~~~~~~Dv~~~~~   64 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PG-IEPVCVDLGDWDA   64 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TT-CEEEECCTTCHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CC-CeEEEEeCCCHHH
Confidence            3689999999999999999999999999999999999998877665544    33 3456788887544

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.37  E-value=8.1e-13  Score=100.59  Aligned_cols=70  Identities=21%  Similarity=0.322  Sum_probs=58.1

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~-~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ..+|+||+++||||++|||+++++.|+++|++|++++++. +.++++.+++.+. +.....+.+|++|+.++
T Consensus        13 ~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~-g~~~~~~~~D~~~~~~v   83 (272)
T d1g0oa_          13 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN-GSDAACVKANVGVVEDI   83 (272)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhh-CCceeeEeCCCCCHHHH
Confidence            3469999999999999999999999999999999998874 5566777777665 45567888999987654

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=3.7e-13  Score=101.89  Aligned_cols=64  Identities=22%  Similarity=0.351  Sum_probs=52.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +|+||+++||||++|||+++|+.|+++|++|++++|+++.++++.+++    ++ ...+.+|++|+.++
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~----~~-~~~~~~Dvs~~~~v   66 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----PG-AVFILCDVTQEDDV   66 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TT-EEEEECCTTSHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CC-CeEEEccCCCHHHH
Confidence            589999999999999999999999999999999999988776654443    33 45667777775543

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.35  E-value=6e-13  Score=100.07  Aligned_cols=65  Identities=22%  Similarity=0.328  Sum_probs=55.1

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .|+||+++||||++|||+++|+.|+++|++|++++|+.+++++..+++    +.....+.+|+++++++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~i   66 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL----EAEAIAVVADVSDPKAV   66 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC----CSSEEEEECCTTSHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----CCceEEEEecCCCHHHH
Confidence            478999999999999999999999999999999999998876655543    55567788998886654

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.33  E-value=1.2e-12  Score=98.69  Aligned_cols=66  Identities=21%  Similarity=0.295  Sum_probs=52.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +|+||+++||||++|||+++|+.|+++|++|++++|++++.  . ++..+..+.....+.+|++|+.++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~--~-~~~~~~~g~~~~~~~~Dvs~~~~v   67 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE--A-EAAIRNLGRRVLTVKCDVSQPGDV   67 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHH--H-HHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH--H-HHHHHHcCCcEEEEEeeCCCHHHH
Confidence            48999999999999999999999999999999999987532  2 222334455567788888886544

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=2.1e-12  Score=96.64  Aligned_cols=61  Identities=18%  Similarity=0.329  Sum_probs=51.2

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCC
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAK  141 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~  141 (147)
                      +++||+++||||++|||+++|++|+++|++|++++|+.+.+++..+++    +.......+|+.+
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l----~~~~~~~~~~~~~   62 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL----GNNCVFAPADVTS   62 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH----CTTEEEEECCTTC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CCCcccccccccc
Confidence            589999999999999999999999999999999999998887776655    3344555666655

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=1.7e-12  Score=98.88  Aligned_cols=64  Identities=25%  Similarity=0.361  Sum_probs=56.4

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           81 YNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~-Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ++++||||++|||+++|++|+++ |++|++.+|++++++++++++.+..++ ..++.+|++|..++
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~-~~~~~~Dvs~~~sv   68 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLS-PRFHQLDIDDLQSI   68 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCC-CEEEECCTTCHHHH
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEEEecCCHHHH
Confidence            47799999999999999999986 899999999999999999999887655 56788999986654

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.28  E-value=3.5e-12  Score=92.52  Aligned_cols=65  Identities=18%  Similarity=0.314  Sum_probs=55.1

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCC
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAK  141 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~  141 (147)
                      ..+++||+++||||++|||+++++.|+++|++|++++|+.+++++..+++.+.....  +..+|+++
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~d~~~   82 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVN--VTAAETAD   82 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCC--CEEEECCS
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchh--hhhhhccc
Confidence            357999999999999999999999999999999999999999999888887655432  34556555

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.27  E-value=2.7e-12  Score=97.16  Aligned_cols=65  Identities=15%  Similarity=0.157  Sum_probs=50.8

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCC-eEEEEEcccCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE-QHVVQNVMLAK  141 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~-~~~~~~~dv~~  141 (147)
                      ++++||+++||||++|||+++|++|+++|++|++++|+.+..++. +++....++ ...++.+|++.
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~   66 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTAL-AELKAINPKVNITFHTYDVTV   66 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHH-HHHHHHCTTSEEEEEECCTTS
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHH-HHHHhhCCCCCEEEEEeecCC
Confidence            368999999999999999999999999999999998876665443 444444444 45666778773

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.26  E-value=6.1e-12  Score=94.68  Aligned_cols=68  Identities=19%  Similarity=0.320  Sum_probs=52.7

Q ss_pred             CCCCCCEEEEeCCcC--hHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           76 PMLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~--GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .+|+||+++|||+++  |||+++|++|+++|++|++.+|+++..++ .+++....+. ...+.+|++|+.++
T Consensus         4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~-~~~~~~~~~~-~~~~~~D~~~~~~v   73 (256)
T d1ulua_           4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPE-AEKLAEALGG-ALLFRADVTQDEEL   73 (256)
T ss_dssp             ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHHTTC-CEEEECCTTCHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH-HHHhhhccCc-ccccccccCCHHHH
Confidence            468999999999876  99999999999999999999998755444 3444444443 45678888876544

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.24  E-value=1.4e-11  Score=92.25  Aligned_cols=65  Identities=29%  Similarity=0.474  Sum_probs=57.0

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh----------------HHHHHHHHHHHHHhCCeEEEEEccc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA----------------ERVDSAVQSLREEFGEQHVVQNVML  139 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~----------------~~~~~~~~~l~~~~~~~~~~~~~dv  139 (147)
                      +.++||+++||||++|||+++++.|+++|++|++++|++                +..++.++++.++++..++++++..
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG   82 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAG   82 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCceEEEEecCCHHHHHHHHHHHHHhcCCceEEEeeec
Confidence            458999999999999999999999999999999999854                3567788888889999999988765


Q ss_pred             C
Q 032110          140 A  140 (147)
Q Consensus       140 ~  140 (147)
                      .
T Consensus        83 ~   83 (237)
T d1uzma1          83 L   83 (237)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.20  E-value=7.4e-12  Score=93.96  Aligned_cols=64  Identities=30%  Similarity=0.397  Sum_probs=56.2

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCE-------EEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDN-------VIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~-------V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ++++||||++|||+++|+.|+++|++       |++++|+++.++++.+++.+. +.....+.+|++|+.++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~-g~~~~~~~~Dvt~~~~v   72 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE-GALTDTITADISDMADV   72 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT-TCEEEEEECCTTSHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHH
Confidence            47899999999999999999999997       899999999999999988765 45567889999997654

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.20  E-value=2.9e-11  Score=90.15  Aligned_cols=63  Identities=25%  Similarity=0.396  Sum_probs=53.0

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH------------HHHHHHHhCCeEEEEEcccC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA------------VQSLREEFGEQHVVQNVMLA  140 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~------------~~~l~~~~~~~~~~~~~dv~  140 (147)
                      |+||+++|||+++|||+++|+.|+++|++|++++|+++.+++.            ++++.+++++.++++++...
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~   76 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGG   76 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhcCCcEEEcchHHHHHHHHHHhCCCcEEEecccc
Confidence            6899999999999999999999999999999999998876542            45566677777777776543

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.20  E-value=4.8e-11  Score=89.87  Aligned_cols=40  Identities=35%  Similarity=0.661  Sum_probs=37.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~  116 (147)
                      .|+||+++|||+++|||+++|+.|+++|++|++++|+++.
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~   41 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG   41 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            5799999999999999999999999999999999998754

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.19  E-value=2.3e-11  Score=91.46  Aligned_cols=64  Identities=28%  Similarity=0.367  Sum_probs=53.8

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEe-CChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~-r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      ++++||||++|||+++|++|+++|++|++.+ |+++.++++.+++.+. +.....+.+|++|+.++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v   66 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY-GGQAITFGGDVSKEADV   66 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH-TCEEEEEECCTTSHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-CCcEEEEeCCCCCHHHH
Confidence            4899999999999999999999999999975 5667778787777654 56677889999987654

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.17  E-value=1.5e-11  Score=92.81  Aligned_cols=65  Identities=18%  Similarity=0.324  Sum_probs=49.4

Q ss_pred             CCCCCEEEEeCCcC--hHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           77 MLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        77 ~~~~k~~lVTG~s~--GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      .|+||+++|||+++  |||+++|++|+++|++|++++|+++ +++.++++.+..+. ..+..+|++++.
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~~-~~~~~~d~~~~~   68 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNS-PYVYELDVSKEE   68 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTC-CCEEECCTTCHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCCc-eeEeeecccchh
Confidence            58999999999765  9999999999999999999999854 44445555555433 345566666644

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.17  E-value=1e-11  Score=93.18  Aligned_cols=64  Identities=20%  Similarity=0.394  Sum_probs=50.7

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      |+.|+++||||++|||+++|++|+++|+  +|++.+|++++++++    .+..+....++.+|++++.++
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l----~~~~~~~~~~~~~Dvs~~~~v   66 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL----KSIKDSRVHVLPLTVTCDKSL   66 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHH----HTCCCTTEEEEECCTTCHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHH----HHhhCCceEEEEEecCCHHHH
Confidence            4568999999999999999999999996  688899998877654    333344566778888876543

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.15  E-value=6.7e-11  Score=91.52  Aligned_cols=38  Identities=29%  Similarity=0.381  Sum_probs=35.5

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      ++++||+++|||+++|||+++|+.|+++|++|++.+++
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~   40 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLG   40 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence            46899999999999999999999999999999998764

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=7.9e-11  Score=88.39  Aligned_cols=43  Identities=26%  Similarity=0.421  Sum_probs=40.1

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      .|+||+++||||++|||+++++.|+++|++|++++|+++++++
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~   45 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE   45 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGG
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            4899999999999999999999999999999999999877654

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.13  E-value=3.2e-11  Score=90.35  Aligned_cols=64  Identities=20%  Similarity=0.352  Sum_probs=52.8

Q ss_pred             CCEEEEeCCcChHHHHHHHHHH---HCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           80 PYNVLITGSTKGIGYALAKEFL---KAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La---~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .|+++|||+++|||+++|++|+   ++|++|++++|++++++++. ++.+..+ ...++.+|++|++++
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~-~~~~~~~-~~~~~~~Dvs~~~~v   68 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE-DLAKNHS-NIHILEIDLRNFDAY   68 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH-HHHHHCT-TEEEEECCTTCGGGH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HHHhcCC-cEEEEEEEeccHHHH
Confidence            4789999999999999999996   57999999999999887764 4555544 467789999997765

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.13  E-value=2.4e-11  Score=91.27  Aligned_cols=65  Identities=12%  Similarity=0.277  Sum_probs=51.9

Q ss_pred             CCCCCEEEEeC--CcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           77 MLPPYNVLITG--STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        77 ~~~~k~~lVTG--~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      .|+||+++|||  +++|||+++|++|+++|++|++++|+.+++.   +++.+..+.....+.+|++++.+
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~---~~~~~~~~~~~~~~~~dv~~~~~   69 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLI---QRITDRLPAKAPLLELDVQNEEH   69 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHH---HHHHTTSSSCCCEEECCTTCHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHH---HHHHHHcCCceeeEeeecccccc
Confidence            68999999999  4579999999999999999999999987654   33334455556677888887643

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.13  E-value=1.1e-10  Score=87.29  Aligned_cols=62  Identities=23%  Similarity=0.280  Sum_probs=51.5

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH-HHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~-~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      ++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++.+..+.....+..|..+..
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   65 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSS   65 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSST
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccch
Confidence            79999999999999999999999999999998654 566777787777776677776666543

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.07  E-value=3.1e-10  Score=86.22  Aligned_cols=40  Identities=25%  Similarity=0.410  Sum_probs=36.0

Q ss_pred             CCCCCCCEEEEeCCcC--hHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           75 EPMLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~--GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      .++|+||+++|||+++  |||+++|++|+++|++|++.+|+.
T Consensus         3 ~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~   44 (297)
T d1d7oa_           3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVP   44 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCch
Confidence            4579999999999875  999999999999999999998753

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.05  E-value=4.9e-10  Score=84.43  Aligned_cols=61  Identities=20%  Similarity=0.262  Sum_probs=53.0

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      +++||||++|||+++|++|+++|++|++.++ +++.++++.+++.+.++...+.+.+|..+.
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~   65 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNV   65 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccc
Confidence            8999999999999999999999999999766 456677888889888888888888886553

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.04  E-value=1.9e-10  Score=86.18  Aligned_cols=65  Identities=25%  Similarity=0.396  Sum_probs=52.7

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCCh---HHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA---ERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~---~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      +++++||||++|||+++++.|+++|+ +|++++|+.   +..++..+++.+ .+....++.+|++|..++
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~-~g~~v~~~~~Dv~d~~~~   77 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEA-LGARTTVAACDVTDRESV   77 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHH-TTCEEEEEECCTTCHHHH
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHh-ccccccccccccchHHHH
Confidence            45999999999999999999999998 688899874   445666677765 456678889999986543

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.03  E-value=1.5e-10  Score=86.49  Aligned_cols=64  Identities=19%  Similarity=0.393  Sum_probs=49.4

Q ss_pred             CCCCCEEEEeCCcC--hHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           77 MLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        77 ~~~~k~~lVTG~s~--GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      .|+||+++||||++  |||+++|+.|+++|++|++.+|+++..+ .++++....+. ......|+++.
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~   67 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKG-RVEEFAAQLGS-DIVLQCDVAED   67 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHH-HHHHHHHHTTC-CCEEECCTTCH
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHhhcCC-cceeecccchH
Confidence            47999999999998  8999999999999999999999965444 34555554444 34556666653

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=1e-09  Score=83.89  Aligned_cols=66  Identities=18%  Similarity=0.120  Sum_probs=47.3

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEE---EeCChHHHHHHHHHHHH--HhCCeEEEEEcccCCCCCc
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVII---CSRSAERVDSAVQSLRE--EFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i---~~r~~~~~~~~~~~l~~--~~~~~~~~~~~dv~~~~~~  145 (147)
                      .|+++||||++|||+++|+.|+++|++|++   ..|+.+..+++.+...+  ..+.....+.+|++|..++
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~   72 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSV   72 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHH
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhh
Confidence            478999999999999999999999987544   45665544433333322  2244577889999986654

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.83  E-value=2.5e-09  Score=80.15  Aligned_cols=58  Identities=17%  Similarity=0.253  Sum_probs=47.9

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH---------------------HHHHHHHHHhCCeEEEEEccc
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD---------------------SAVQSLREEFGEQHVVQNVML  139 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~---------------------~~~~~l~~~~~~~~~~~~~dv  139 (147)
                      +++|||+++|||+++|++|+++|++|++.+|+.+.++                     ++++++.++++..++++++.+
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg   80 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDI   80 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            7899999999999999999999999999999765443                     345566677888888887654

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.80  E-value=1.5e-08  Score=74.98  Aligned_cols=61  Identities=13%  Similarity=0.104  Sum_probs=46.7

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH-----------------HHHHHHHHHHHHh--CCeEEEEEccc
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-----------------RVDSAVQSLREEF--GEQHVVQNVML  139 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~-----------------~~~~~~~~l~~~~--~~~~~~~~~dv  139 (147)
                      +||+++||||++|||+++++.|+++|++|+++++++.                 ..++...++.+..  ++.++++++.+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lInnAG   80 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAG   80 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccccccceeecccCcHHHHHHHHHHHHHHhCCCCceEEEECCc
Confidence            5899999999999999999999999999999887532                 2233444444443  35788888765

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.78  E-value=2.4e-09  Score=78.67  Aligned_cols=36  Identities=28%  Similarity=0.408  Sum_probs=33.9

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      +|+++||||++|||+++|+.|+++|++|++++|+++
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~   36 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE   36 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc
Confidence            589999999999999999999999999999999764

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.76  E-value=9.9e-09  Score=76.02  Aligned_cols=35  Identities=26%  Similarity=0.354  Sum_probs=32.9

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      |+++||||++|||+++|++|+++|++|++++|+++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~   36 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence            79999999999999999999999999999998753

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.73  E-value=1.8e-08  Score=78.03  Aligned_cols=35  Identities=29%  Similarity=0.411  Sum_probs=31.4

Q ss_pred             CCCEEEEeC--CcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           79 PPYNVLITG--STKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~~k~~lVTG--~s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      .+|+++|||  +++|||+++|+.|+++|++|++.+++
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~   37 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWP   37 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCc
Confidence            378999999  66899999999999999999998754

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.69  E-value=3.9e-08  Score=72.51  Aligned_cols=60  Identities=22%  Similarity=0.179  Sum_probs=45.3

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH-----------------HHHHHHHHHH--HhCCeEEEEEcccC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-----------------VDSAVQSLRE--EFGEQHVVQNVMLA  140 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~-----------------~~~~~~~l~~--~~~~~~~~~~~dv~  140 (147)
                      ++++||||++|||++++++|+++|++|++++|+++.                 .+...+.+..  .+++.++++++...
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linnAG~   81 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGG   81 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcccccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEECCcc
Confidence            457999999999999999999999999999997431                 1122223333  45788999987764

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.65  E-value=5.5e-08  Score=67.67  Aligned_cols=50  Identities=24%  Similarity=0.438  Sum_probs=43.9

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeE
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH  132 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~  132 (147)
                      +.|+||+|+||.++|+.|++.|++|++++|+++++++..+++........
T Consensus         3 i~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~~~~   52 (212)
T d1jaya_           3 VALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDAS   52 (212)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCC
T ss_pred             EEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCce
Confidence            56778889999999999999999999999999999999999887655443

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=98.62  E-value=1.5e-07  Score=72.42  Aligned_cols=68  Identities=18%  Similarity=0.189  Sum_probs=52.9

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHh-CCeEEEEEcccCCCCCc
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF-GEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~~~dv~~~~~~  145 (147)
                      .+||+++||||+|.||..+++.|.++|++|+.+.|+.++.+.......... ......+..|+.+...+
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~   77 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAY   77 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTT
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhh
Confidence            468999999999999999999999999999999999877665544333322 34455677888876654

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=3.6e-08  Score=70.96  Aligned_cols=40  Identities=23%  Similarity=0.349  Sum_probs=36.4

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~  117 (147)
                      |..|+++||||+|+||.+++++|+++|++|.++.|+.+++
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~   40 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL   40 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhc
Confidence            4567899999999999999999999999999999988764

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=98.41  E-value=6.2e-08  Score=74.20  Aligned_cols=63  Identities=21%  Similarity=0.078  Sum_probs=45.1

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      +++|+++||||+|.||..+++.|.++|++|++++|+........+...  ......++.+|++|.
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~i~~~~~Dl~d~   68 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR--VADGMQSEIGDIRDQ   68 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT--TTTTSEEEECCTTCH
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh--cccCCeEEEeeccCh
Confidence            478999999999999999999999999999999997654333222211  111234555666553

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.35  E-value=3.8e-07  Score=71.03  Aligned_cols=32  Identities=25%  Similarity=0.281  Sum_probs=30.0

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEe
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICS  111 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~  111 (147)
                      |+.++||||+|.||..++++|++.|++|+++|
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            67899999999999999999999999999987

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=98.34  E-value=2e-07  Score=72.26  Aligned_cols=35  Identities=37%  Similarity=0.280  Sum_probs=31.5

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      .|+++||||+|.||..++++|.+.|++|++++|..
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~   35 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRA   35 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            37899999999999999999999999999999854

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.31  E-value=2.8e-07  Score=70.75  Aligned_cols=33  Identities=24%  Similarity=0.393  Sum_probs=30.8

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSR  112 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r  112 (147)
                      .|+++||||+|.||..+++.|+++|++|+++++
T Consensus         1 ~K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~   33 (347)
T d1z45a2           1 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADN   33 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCeEEEEEC
Confidence            378999999999999999999999999999875

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.25  E-value=2.5e-07  Score=70.26  Aligned_cols=33  Identities=33%  Similarity=0.190  Sum_probs=31.6

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      |+++||||+|.||..+++.|+++|++|+.++|.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence            789999999999999999999999999999984

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=2.7e-07  Score=70.42  Aligned_cols=62  Identities=23%  Similarity=0.187  Sum_probs=40.1

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH-----HHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-----RVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      |+++||||+|.||..++++|.++|++|+.++|...     .++...............++.+|++|.
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   68 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDS   68 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCH
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCc
Confidence            45599999999999999999999999999998542     122222222222233355667777664

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=5.3e-07  Score=68.95  Aligned_cols=63  Identities=19%  Similarity=0.227  Sum_probs=42.9

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC------hHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS------AERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~------~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      |+++||||+|.||.++++.|++.|++|+++++.      .....+..+.+.........++.+|++|..
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   71 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQG   71 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccc
Confidence            578999999999999999999999999998741      111112222222223444567777777643

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.19  E-value=1.2e-06  Score=67.07  Aligned_cols=61  Identities=15%  Similarity=0.144  Sum_probs=46.7

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      +.|+++||||+|.||..++++|.++|++|+++.|+.+....  .++. ...+ ..++..|+.|..
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~-~~~~-v~~~~gD~~d~~   62 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQ-AIPN-VTLFQGPLLNNV   62 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHH-TSTT-EEEEESCCTTCH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhc-ccCC-CEEEEeeCCCcH
Confidence            46799999999999999999999999999999998765432  2222 2233 457788888754

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=98.17  E-value=8.1e-07  Score=67.93  Aligned_cols=62  Identities=21%  Similarity=0.266  Sum_probs=41.2

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      .++||||+|.||..+++.|+++|++|++++|-..........+.........++++|++|..
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   63 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEA   63 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHH
Confidence            49999999999999999999999999999863221111112222222333455667776643

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.14  E-value=4.3e-07  Score=68.48  Aligned_cols=34  Identities=32%  Similarity=0.226  Sum_probs=32.1

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      |.++||||+|.||..+++.|+++|++|+.++|..
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~   34 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARR   34 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCC
Confidence            6899999999999999999999999999999865

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.13  E-value=3.2e-06  Score=64.41  Aligned_cols=35  Identities=31%  Similarity=0.317  Sum_probs=32.5

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR  112 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r  112 (147)
                      .+.|+++||||+|.||..++++|.++|++|+++++
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~   48 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN   48 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            35679999999999999999999999999999986

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.11  E-value=2.7e-06  Score=62.35  Aligned_cols=63  Identities=19%  Similarity=0.183  Sum_probs=43.6

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH--HHHHHHHHHhCCeEEEEEcccCCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD--SAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~--~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      .|+++||||+|.||..++++|.++|++|++++|+.....  +....+.........++..|+.+.
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~   67 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDH   67 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccc
Confidence            467999999999999999999999999999999754321  111222222223344566676653

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=98.08  E-value=8.6e-07  Score=65.76  Aligned_cols=34  Identities=26%  Similarity=0.335  Sum_probs=31.6

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      +++||||+|.||..++++|.++|++|+++.|+..
T Consensus         5 KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~   38 (312)
T d1qyda_           5 RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEV   38 (312)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCc
Confidence            5999999999999999999999999999999754

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=98.03  E-value=3.7e-06  Score=63.13  Aligned_cols=31  Identities=32%  Similarity=0.416  Sum_probs=29.1

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeC
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSR  112 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r  112 (147)
                      .++||||+|.||..++++|+++|++|+++++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~   32 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDN   32 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEEC
Confidence            5899999999999999999999999999874

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.02  E-value=2.4e-06  Score=60.57  Aligned_cols=38  Identities=26%  Similarity=0.304  Sum_probs=32.2

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCE--EEEEeCChHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDN--VIICSRSAERVD  118 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~--V~i~~r~~~~~~  118 (147)
                      ++++||||+|+||.++++.|+++|++  |+...|++++.+
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~   43 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE   43 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHH
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHH
Confidence            48999999999999999999999965  556778876544

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.86  E-value=8.8e-06  Score=55.91  Aligned_cols=42  Identities=19%  Similarity=0.206  Sum_probs=37.2

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ  122 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~  122 (147)
                      +|.++|-|+ |.+|..+|+.|+++|++|++++|+.+++++..+
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~   43 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA   43 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHh
Confidence            578889875 999999999999999999999999998876544

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=97.69  E-value=2.2e-05  Score=59.46  Aligned_cols=34  Identities=26%  Similarity=0.302  Sum_probs=30.1

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAE  115 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~  115 (147)
                      +++||||+|.||..++++|+++| ++|+++++...
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~   36 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSD   36 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCG
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCc
Confidence            48999999999999999999999 58998887544

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=2e-05  Score=57.16  Aligned_cols=40  Identities=28%  Similarity=0.334  Sum_probs=35.5

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCC--EEEEEeCChH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAE  115 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r~~~  115 (147)
                      +.|++|.++||||+|.||..++++|.++|.  +|+++.|++.
T Consensus        10 ~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~   51 (232)
T d2bkaa1          10 FRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKL   51 (232)
T ss_dssp             HHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCC
T ss_pred             hCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChh
Confidence            457788999999999999999999999995  8999998753

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=3.5e-05  Score=58.03  Aligned_cols=32  Identities=25%  Similarity=0.460  Sum_probs=30.5

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSR  112 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r  112 (147)
                      |.++||||+|.||..++++|+++|++|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence            68999999999999999999999999999876

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.56  E-value=0.00012  Score=50.86  Aligned_cols=50  Identities=18%  Similarity=0.296  Sum_probs=43.8

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE  126 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~  126 (147)
                      ..++||.++|-| +||-+++++.+|.+.|.+|+++.|+.++.++..+.+..
T Consensus        14 ~~~~~k~vlIlG-aGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~   63 (170)
T d1nyta1          14 FIRPGLRILLIG-AGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAH   63 (170)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGG
T ss_pred             CCCCCCEEEEEC-CcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhh
Confidence            356889999998 69999999999999999999999999998887776543

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=97.52  E-value=8.4e-06  Score=62.17  Aligned_cols=32  Identities=19%  Similarity=0.237  Sum_probs=27.2

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEe
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICS  111 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~  111 (147)
                      .|.++||||+|.||..+++.|.++|+.|.++.
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~   33 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTV   33 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEE
Confidence            35799999999999999999999998654443

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=97.51  E-value=9.2e-05  Score=53.90  Aligned_cols=33  Identities=24%  Similarity=0.356  Sum_probs=30.9

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      .++||||+|.||..++++|.++|++|+.++|+.
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~   35 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD   35 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh
Confidence            489999999999999999999999999999865

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.50  E-value=0.00011  Score=45.03  Aligned_cols=42  Identities=19%  Similarity=0.289  Sum_probs=37.0

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      ++..++|+|+++|+|....+.+...|++|+.+.+++++.+.+
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            466899999999999999999899999999999988876544

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=97.50  E-value=3.8e-05  Score=57.31  Aligned_cols=34  Identities=21%  Similarity=0.369  Sum_probs=30.4

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      .|.++||||+|.||..++++|+++|+.|++++..
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~   35 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR   35 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCc
Confidence            3579999999999999999999999998887654

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.49  E-value=7.3e-05  Score=56.96  Aligned_cols=35  Identities=23%  Similarity=0.279  Sum_probs=31.5

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      ++..++||||+|.||..+++.|.++|++|+++++.
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~   48 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWK   48 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCC
Confidence            44569999999999999999999999999999764

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=97.41  E-value=0.00015  Score=55.72  Aligned_cols=31  Identities=26%  Similarity=0.509  Sum_probs=28.0

Q ss_pred             EEEEeCCcChHHHHHHHHHHH-CCCEEEEEeC
Q 032110           82 NVLITGSTKGIGYALAKEFLK-AGDNVIICSR  112 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~-~Ga~V~i~~r  112 (147)
                      .++||||+|.||..++++|++ .|++|+++|+
T Consensus         4 KVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~   35 (383)
T d1gy8a_           4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDS   35 (383)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEEEEC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHhCCCEEEEEec
Confidence            689999999999999999985 7899999874

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.40  E-value=8.5e-05  Score=52.59  Aligned_cols=35  Identities=34%  Similarity=0.416  Sum_probs=30.3

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCC--EEEEEeCCh
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSA  114 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r~~  114 (147)
                      .|+++||||+|.||..++++|.++|+  +|++..|++
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~   38 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKA   38 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCc
Confidence            47899999999999999999999997  677666653

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.32  E-value=0.00032  Score=46.43  Aligned_cols=55  Identities=24%  Similarity=0.358  Sum_probs=43.3

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM  143 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~  143 (147)
                      .++|.|+ |.+|+.+++.|.+.|+.|++++.+++..+++.+    +++  ..++..|.++..
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~----~~~--~~vi~Gd~~~~~   56 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA----EID--ALVINGDCTKIK   56 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HCS--SEEEESCTTSHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhh----hhh--hhhccCcccchh
Confidence            5788885 999999999999999999999999987765433    333  346677877644

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.31  E-value=0.00083  Score=46.22  Aligned_cols=47  Identities=28%  Similarity=0.449  Sum_probs=40.9

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSL  124 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~l  124 (147)
                      +++++.++|.|+ |++|..+++.|...|+ ++.++.|+.++.++...++
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~   68 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL   68 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh
Confidence            578999999996 9999999999999997 6999999998887765543

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=0.00042  Score=47.82  Aligned_cols=40  Identities=20%  Similarity=0.272  Sum_probs=35.7

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      +|.+++|+|++|++|...++.....|++|+++++++++.+
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~   67 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK   67 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccc
Confidence            5678999999999999999999999999999998876654

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.28  E-value=0.00035  Score=48.66  Aligned_cols=40  Identities=18%  Similarity=0.236  Sum_probs=36.3

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      +|.+++|+|+++|+|...++.....|++|+.+.+++++.+
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~   68 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIA   68 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHH
Confidence            4779999999999999999999999999999999887654

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.24  E-value=0.00033  Score=48.74  Aligned_cols=50  Identities=20%  Similarity=0.361  Sum_probs=43.4

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE  126 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~  126 (147)
                      ..+++|.++|-| +||.+++++..|.+.+.+|+++.|+.+++++..+.+..
T Consensus        14 ~~~~~k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~   63 (171)
T d1p77a1          14 WLRPNQHVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQP   63 (171)
T ss_dssp             CCCTTCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGG
T ss_pred             CCCCCCEEEEEC-CcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhh
Confidence            356788999987 78999999999999889999999999999888777753

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.22  E-value=0.0006  Score=47.37  Aligned_cols=49  Identities=29%  Similarity=0.474  Sum_probs=42.8

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE  127 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~  127 (147)
                      ++++|.++|-| +||.+++++.+|.+.| +|.+..|+.++.++..+++...
T Consensus        15 ~~~~k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~   63 (177)
T d1nvta1          15 RVKDKNIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEK   63 (177)
T ss_dssp             CCCSCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHh
Confidence            47899999997 7899999999998777 9999999999999888877654

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.19  E-value=0.00039  Score=47.97  Aligned_cols=41  Identities=20%  Similarity=0.280  Sum_probs=36.9

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      .|++++|+|+++|+|...++.....|++|+++++++++.+.
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~   68 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS   68 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHH
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHH
Confidence            46799999999999999999999999999999999887654

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.17  E-value=0.00078  Score=48.93  Aligned_cols=66  Identities=18%  Similarity=0.260  Sum_probs=45.9

Q ss_pred             CCCCCCEEEEeCC----------------cChHHHHHHHHHHHCCCEEEEEeCCh-------------HHHHHHHHHHHH
Q 032110           76 PMLPPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSRSA-------------ERVDSAVQSLRE  126 (147)
Q Consensus        76 ~~~~~k~~lVTG~----------------s~GIG~~~a~~La~~Ga~V~i~~r~~-------------~~~~~~~~~l~~  126 (147)
                      .+|+|+.++||+|                ||-+|+++|+++..+|++|.++.-..             ...++..+.+.+
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~p~~~~~~~~~t~~~m~~~~~~   81 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNA   81 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCCCTTEEEEECCSHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCcccccccceehhhHHHHHHHHh
Confidence            4678888999876                47799999999999999999864321             134555555555


Q ss_pred             HhCCeEEEEEcccCC
Q 032110          127 EFGEQHVVQNVMLAK  141 (147)
Q Consensus       127 ~~~~~~~~~~~dv~~  141 (147)
                      .....++++......
T Consensus        82 ~~~~~D~~i~aAAvs   96 (223)
T d1u7za_          82 SVQQQNIFIGCAAVA   96 (223)
T ss_dssp             HGGGCSEEEECCBCC
T ss_pred             hhccceeEeeeechh
Confidence            555556666544443

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.15  E-value=0.00016  Score=47.77  Aligned_cols=56  Identities=14%  Similarity=0.187  Sum_probs=41.6

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      |.++|.| .|-+|..+++.|.+.|+.|++++.+++..+++.    .. +  ..++..|.++...
T Consensus         1 k~~iIiG-~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~----~~-~--~~~~~gd~~~~~~   56 (134)
T d2hmva1           1 KQFAVIG-LGRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SY-A--THAVIANATEENE   56 (134)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT----TT-C--SEEEECCTTCTTH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH----Hh-C--Ccceeeecccchh
Confidence            4567776 589999999999999999999999998776542    22 2  2344577776543

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=97.15  E-value=3.1e-05  Score=59.65  Aligned_cols=30  Identities=27%  Similarity=0.513  Sum_probs=26.2

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEE-Ee
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVII-CS  111 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i-~~  111 (147)
                      .++||||+|.||..++++|++.|++|++ ++
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d   32 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNID   32 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            4899999999999999999999987544 44

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.15  E-value=0.00041  Score=48.02  Aligned_cols=41  Identities=20%  Similarity=0.282  Sum_probs=36.1

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      +|++++|+|++|++|...++.+...|++|+.+++++++.+.
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~   67 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL   67 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccccc
Confidence            57799999999999999999999999999999988776543

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.0011  Score=46.91  Aligned_cols=42  Identities=14%  Similarity=0.300  Sum_probs=35.5

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~  123 (147)
                      |.+.|.|+ |-+|..+|..++..|++|+++|++++.+++..+.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~   46 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKG   46 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhh
Confidence            46788875 8899999999999999999999999877655443

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.05  E-value=0.0005  Score=48.18  Aligned_cols=42  Identities=19%  Similarity=0.289  Sum_probs=36.6

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .++.++|+|++||+|...++.....|++|+.+.+++++.+.+
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~   72 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence            345899999999999999999999999999999998886433

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.03  E-value=0.00054  Score=47.29  Aligned_cols=40  Identities=25%  Similarity=0.327  Sum_probs=35.5

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      +|.+++|+||++++|...++.+...|++|+++++++++.+
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~   64 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE   64 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccc
Confidence            4679999999999999999999999999999998876654

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.00  E-value=0.00037  Score=48.44  Aligned_cols=42  Identities=29%  Similarity=0.361  Sum_probs=36.7

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      ++..++|+|++||+|...++.....|++|+.+.+++++.+.+
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~   64 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL   64 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH
Confidence            355799999999999999999889999999999998876544

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=96.97  E-value=0.00034  Score=51.01  Aligned_cols=29  Identities=21%  Similarity=0.471  Sum_probs=26.4

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCC-EEEEEe
Q 032110           83 VLITGSTKGIGYALAKEFLKAGD-NVIICS  111 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~  111 (147)
                      ++||||+|.||..+++.|+++|+ .|++++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d   31 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVD   31 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEE
Confidence            79999999999999999999996 587775

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.89  E-value=0.0053  Score=42.55  Aligned_cols=44  Identities=18%  Similarity=0.194  Sum_probs=37.2

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSA  120 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~  120 (147)
                      .++++|.++|.| +||.+++++..|...|. +++++.|+.+..++.
T Consensus        14 ~~l~~k~vlIlG-aGGaarai~~al~~~g~~~i~i~nR~~~~~~~~   58 (182)
T d1vi2a1          14 FDIKGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKA   58 (182)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHH
T ss_pred             CCcCCCEEEEEC-CcHHHHHHHHHHhhcCCceEeeeccchHHHHHH
Confidence            357899999998 48999999999999996 699999987765543

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.88  E-value=0.0017  Score=44.25  Aligned_cols=41  Identities=27%  Similarity=0.295  Sum_probs=34.8

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .|.+++|.| +|++|...++.+...|++|+++++++++++.+
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a   66 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVA   66 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHH
Confidence            355788887 78999999999999999999999998876533

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.85  E-value=0.00062  Score=47.70  Aligned_cols=42  Identities=29%  Similarity=0.293  Sum_probs=36.8

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      +|.+++|+|++||.|....+.....|++|+.+.+++++.+.+
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~   72 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL   72 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHH
Confidence            467899999999999999999989999999999988776443

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.84  E-value=0.0012  Score=45.50  Aligned_cols=45  Identities=18%  Similarity=0.279  Sum_probs=38.3

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSL  124 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~l  124 (147)
                      ++|.++|-| +||.+++++..|.+.|+ +|.++.|+.++.+++.+.+
T Consensus        16 ~~~~vlIlG-aGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            467788887 69999999999999996 7999999999887766554

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=96.80  E-value=0.001  Score=48.16  Aligned_cols=29  Identities=24%  Similarity=0.542  Sum_probs=25.0

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEE
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIIC  110 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~  110 (147)
                      .++||||+|-||..+++.|.+.|..|++.
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v~~~   30 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLIALD   30 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEE
Confidence            48999999999999999999998655443

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.79  E-value=0.0013  Score=45.04  Aligned_cols=41  Identities=29%  Similarity=0.298  Sum_probs=34.8

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .|.+++|.|+ |++|...++.+...|++|+++++++++++.+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a   67 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA   67 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh
Confidence            4668899885 8999999998888999999999998876643

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.79  E-value=0.0021  Score=43.89  Aligned_cols=40  Identities=20%  Similarity=0.219  Sum_probs=34.9

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      |++-|.| +|.+|.+++..|+++|++|.+++|+++..+...
T Consensus         2 k~iaIiG-aG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~   41 (184)
T d1bg6a2           2 KTYAVLG-LGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQ   41 (184)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            6788887 599999999999999999999999988766543

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.77  E-value=0.0018  Score=44.70  Aligned_cols=40  Identities=25%  Similarity=0.268  Sum_probs=34.5

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~  119 (147)
                      .|.+++|.|+ |++|...++.+...|+ +|+++++++++++.
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~   68 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKL   68 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHH
T ss_pred             CCCEEEEECC-Cccchhheecccccccccccccccccccccc
Confidence            4678999985 8999999999999997 79999999887653

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.73  E-value=0.0026  Score=43.09  Aligned_cols=40  Identities=20%  Similarity=0.218  Sum_probs=34.4

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      .|.+++|.|+ |++|...++.+...|++|+++++++++++.
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~   66 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLEL   66 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHh
Confidence            4668889875 999999999999999999999999887653

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.70  E-value=0.001  Score=41.40  Aligned_cols=38  Identities=21%  Similarity=0.162  Sum_probs=33.1

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      +++||+++|.|. |.-|.++++.|.++|++|++.|.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            478999999985 77899999999999999999998553

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.69  E-value=0.0017  Score=45.48  Aligned_cols=42  Identities=10%  Similarity=0.211  Sum_probs=35.3

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l  124 (147)
                      ++.|.|+ |-||..+|..++..|++|+++|++++.+++..+.+
T Consensus         6 ~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i   47 (186)
T d1wdka3           6 QAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEA   47 (186)
T ss_dssp             SEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhh
Confidence            5777775 88999999999999999999999998877655443

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.63  E-value=0.0031  Score=44.97  Aligned_cols=44  Identities=30%  Similarity=0.419  Sum_probs=39.0

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .+++||+++|.| .|.+|..+++.|.+.|++|++.+.+.+.++..
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~   66 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA   66 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence            368999999997 88899999999999999999999988776654

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.61  E-value=0.0019  Score=43.36  Aligned_cols=40  Identities=20%  Similarity=0.205  Sum_probs=34.9

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~  117 (147)
                      ..-|++.|.||.|-+|..+++.|.+.|++|.+++++....
T Consensus         7 ~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~   46 (152)
T d2pv7a2           7 SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV   46 (152)
T ss_dssp             TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG
T ss_pred             CCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccc
Confidence            3445789999999999999999999999999999987543

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=96.54  E-value=0.004  Score=43.34  Aligned_cols=43  Identities=23%  Similarity=0.166  Sum_probs=33.6

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l  124 (147)
                      +++++||++|+|....+.....|++|+.+.++.+..++..+.+
T Consensus        32 vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~   74 (189)
T d1gu7a2          32 WFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASL   74 (189)
T ss_dssp             EEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHH
T ss_pred             EEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhh
Confidence            5666899999999999988889999999887766555444433

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.51  E-value=0.011  Score=40.89  Aligned_cols=41  Identities=20%  Similarity=0.243  Sum_probs=36.8

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~  117 (147)
                      ..+.||+++|.| .|-+|+.+|+.+...|++|++++.++-..
T Consensus        20 ~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~a   60 (163)
T d1li4a1          20 VMIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINA   60 (163)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             ceecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchh
Confidence            468999999998 77899999999999999999999998543

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.43  E-value=0.0044  Score=42.10  Aligned_cols=41  Identities=20%  Similarity=0.315  Sum_probs=35.0

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~  119 (147)
                      .+.+++|.|++|++|..+++.+...| .+|+++++++++.+.
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~   68 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEA   68 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHH
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHH
Confidence            45689999999999999999988888 589999999876554

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.39  E-value=0.0036  Score=42.41  Aligned_cols=38  Identities=26%  Similarity=0.328  Sum_probs=31.5

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      +.|- |.|-+|..+++.|.+.|++|++++|+++..+++.
T Consensus         3 I~iI-G~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~   40 (165)
T d2f1ka2           3 IGVV-GLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV   40 (165)
T ss_dssp             EEEE-CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEE-eecHHHHHHHHHHHHCCCEEEEEECCchHHHHHH
Confidence            3344 4799999999999999999999999987766543

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=96.38  E-value=0.0077  Score=40.60  Aligned_cols=45  Identities=18%  Similarity=0.354  Sum_probs=36.9

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLR  125 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~~~~~~~~~~~l~  125 (147)
                      .+++.|.| +|.+|..++..|+.+|  .+|+++|++++..+..+.++.
T Consensus         5 ~~KI~IIG-aG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~   51 (146)
T d1ez4a1           5 HQKVVLVG-DGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLE   51 (146)
T ss_dssp             BCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHh
Confidence            44677788 5999999999999988  579999999988776666654

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.0061  Score=41.50  Aligned_cols=40  Identities=25%  Similarity=0.287  Sum_probs=33.9

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~  119 (147)
                      .|.+++|.|+ |++|...++.+...|+ +|+++++++++++.
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~   66 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSK   66 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHH
Confidence            3557888875 9999999999999998 79999999887653

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.37  E-value=0.0059  Score=41.51  Aligned_cols=39  Identities=23%  Similarity=0.282  Sum_probs=33.6

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      .|.+++|.|+ |++|...++.+...|+++++++++.++.+
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~   68 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE   68 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHH
Confidence            4668999885 99999999988899999999999888764

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.31  E-value=0.0041  Score=41.69  Aligned_cols=60  Identities=13%  Similarity=0.092  Sum_probs=46.1

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW  145 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~  145 (147)
                      .++|.| .+-+|..+++.|.++|.+|++++.+++...+..+++.   .....++..|.++...|
T Consensus         5 HiII~G-~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~---~~~~~vi~Gd~~d~~~L   64 (153)
T d1id1a_           5 HFIVCG-HSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL---GDNADVIPGDSNDSSVL   64 (153)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH---CTTCEEEESCTTSHHHH
T ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhh---cCCcEEEEccCcchHHH
Confidence            578887 5799999999999999999999999887665555543   22356778888876543

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=96.25  E-value=0.00056  Score=51.10  Aligned_cols=27  Identities=22%  Similarity=0.378  Sum_probs=24.2

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEE
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVI  108 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~  108 (147)
                      .++||||+|.||..+++.|+++|+.|.
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~   28 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDV   28 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCcc
Confidence            489999999999999999999997543

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.25  E-value=0.0056  Score=39.13  Aligned_cols=38  Identities=21%  Similarity=0.255  Sum_probs=33.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      +++||.++|.| +|-+|...++.|++.|++|++.+....
T Consensus         9 ~l~~k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           9 QLRDRDCLIVG-GGDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             CCBTCEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EeCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            68999999998 667999999999999999999876543

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.24  E-value=0.0054  Score=42.06  Aligned_cols=41  Identities=15%  Similarity=0.190  Sum_probs=34.8

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~  123 (147)
                      |+.+|  |-|-+|..+++.|++.|++|.+++|++++.+++.++
T Consensus         3 kIGvI--GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           3 DVGVV--GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             SEEEE--CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             EEEEE--eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            34444  589999999999999999999999999988777654

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.22  E-value=0.0069  Score=41.77  Aligned_cols=40  Identities=18%  Similarity=0.362  Sum_probs=34.7

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~  119 (147)
                      .|.+++|.| .||+|...++.+...| .+|+++|.++++++.
T Consensus        29 ~g~tVlI~G-~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~   69 (176)
T d1d1ta2          29 PGSTCVVFG-LGGVGLSVIMGCKSAGASRIIGIDLNKDKFEK   69 (176)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHH
T ss_pred             CCCEEEEEC-CCchhHHHHHHHHHcCCceEEEecCcHHHHHH
Confidence            466899997 5999999999999999 589999999988763

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.13  E-value=0.0079  Score=40.43  Aligned_cols=41  Identities=27%  Similarity=0.298  Sum_probs=34.3

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      .|.+++|.| +|++|...++.+...|++|+++++++++++.+
T Consensus        27 ~g~~vlv~G-~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          27 PGEWVAIYG-IGGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             TTCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEee-cccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            356788886 59999999999999999999999998876543

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=96.10  E-value=0.011  Score=42.90  Aligned_cols=48  Identities=21%  Similarity=0.310  Sum_probs=41.7

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~  123 (147)
                      ..+++||+++|-| .|.+|..+++.|.+.|++|++.+.+...+++...+
T Consensus        34 ~~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~   81 (230)
T d1leha1          34 SDSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE   81 (230)
T ss_dssp             SCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh
Confidence            3468999999997 89999999999999999999999998877766554

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.08  E-value=0.012  Score=39.93  Aligned_cols=46  Identities=15%  Similarity=0.106  Sum_probs=36.6

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLR  125 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~~~~l~  125 (147)
                      +.+++.|.|+ |.+|..++..|+..+ ++++++|.+++.++..+.++.
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~   52 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLS   52 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHH
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHh
Confidence            4457788886 999999999999888 689999999887666555543

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.97  E-value=0.0047  Score=42.93  Aligned_cols=40  Identities=10%  Similarity=0.031  Sum_probs=31.1

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEE-EEeCChHHHHH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVI-ICSRSAERVDS  119 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~-i~~r~~~~~~~  119 (147)
                      +++++|+||+||+|...++.....|++++ .+..++++..+
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~   71 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLF   71 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHH
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhh
Confidence            46899999999999999998888998644 45666555443

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.96  E-value=0.0084  Score=41.95  Aligned_cols=35  Identities=26%  Similarity=0.308  Sum_probs=29.9

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      .+.|.++|.| +|=.|+.+|..|+++|++|.+++|+
T Consensus         4 ~~~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLG-SGVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCC
Confidence            3455788887 7888999999999999999999874

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=95.95  E-value=0.0088  Score=41.09  Aligned_cols=41  Identities=20%  Similarity=0.340  Sum_probs=34.5

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~  120 (147)
                      .|.+++|.| .||+|...++.+...|+ +|+++++++++++.+
T Consensus        27 ~G~~VlV~G-aGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a   68 (174)
T d1p0fa2          27 PGSTCAVFG-LGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA   68 (174)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEEC-CCchhHHHHHHHHHcCCceeeccCChHHHHHHH
Confidence            466899998 59999999999999996 799999998887543

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=95.90  E-value=0.012  Score=40.03  Aligned_cols=41  Identities=17%  Similarity=0.251  Sum_probs=34.1

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSA  120 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~  120 (147)
                      .|.+++|.|+ +|+|...+..+...| .+|+++++++++.+.+
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a   69 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA   69 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHH
Confidence            4668999987 789999999999998 5899999998876533

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.90  E-value=0.033  Score=37.99  Aligned_cols=48  Identities=17%  Similarity=0.336  Sum_probs=38.4

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLRE  126 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r~~~~~~~~~~~l~~  126 (147)
                      ++..++.|.| .|.+|..++..|+..|.  +++++|++++.++..+.++..
T Consensus        17 ~~~~KI~IIG-aG~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~   66 (159)
T d2ldxa1          17 LSRCKITVVG-VGDVGMACAISILLKGLADELALVDADTDKLRGEALDLQH   66 (159)
T ss_dssp             CCCCEEEEEC-CSHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhC
Confidence            4444577778 59999999999999983  799999999888777777754

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=95.89  E-value=0.0082  Score=41.29  Aligned_cols=40  Identities=15%  Similarity=0.120  Sum_probs=33.0

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~  119 (147)
                      +|.+++|.|+ ||+|...++.+...|+ +|+++++++++++.
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~   67 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEA   67 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHH
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHH
Confidence            3557888875 8999999999999997 69999998877553

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.84  E-value=0.02  Score=38.44  Aligned_cols=47  Identities=9%  Similarity=0.206  Sum_probs=38.6

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLRE  126 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r~~~~~~~~~~~l~~  126 (147)
                      .++++.|.|+ |.+|..++..|+..|.  +++++|++++.++..+.++..
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~   53 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNH   53 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhh
Confidence            4557888885 9999999999999883  799999999887776666654

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=95.74  E-value=0.0087  Score=41.91  Aligned_cols=39  Identities=23%  Similarity=0.264  Sum_probs=33.1

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      +.+.|-| +|..|.++|..|++.|++|.+++|+++..++.
T Consensus         8 ~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i   46 (189)
T d1n1ea2           8 NKAVVFG-SGAFGTALAMVLSKKCREVCVWHMNEEEVRLV   46 (189)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSCHHHHHHH
T ss_pred             ceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEecHHHHHHH
Confidence            4577777 78899999999999999999999998776544

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.72  E-value=0.0068  Score=40.56  Aligned_cols=36  Identities=17%  Similarity=0.312  Sum_probs=32.1

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR  112 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r  112 (147)
                      ..++||.++|.|| |.+|..-++.|++.|++|.+++.
T Consensus         9 ~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1           9 HQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             ECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             eeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            3589999999995 77999999999999999999864

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.45  E-value=0.009  Score=40.98  Aligned_cols=40  Identities=20%  Similarity=0.284  Sum_probs=33.8

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ  122 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~  122 (147)
                      .+-+.| -|-+|..+|+.|++.|++|++++|++++.++..+
T Consensus         4 nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~   43 (176)
T d2pgda2           4 DIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLA   43 (176)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHH
T ss_pred             cEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH
Confidence            345555 6899999999999999999999999998877643

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=95.43  E-value=0.024  Score=38.89  Aligned_cols=39  Identities=18%  Similarity=0.231  Sum_probs=32.9

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVD  118 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~  118 (147)
                      .|.+++|.| .||+|...++.+...|+ .|++.+.++++++
T Consensus        28 ~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~   67 (174)
T d1e3ia2          28 PGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFP   67 (174)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHH
T ss_pred             CCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHH
Confidence            456888886 69999999999999997 6888899887754

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=95.39  E-value=0.033  Score=37.31  Aligned_cols=45  Identities=18%  Similarity=0.377  Sum_probs=37.1

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLRE  126 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~~~~~~~~~~~l~~  126 (147)
                      |++.|.| .|.+|..++..|+.+|  .+++++|+++++++....++..
T Consensus         2 kKI~IIG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~   48 (146)
T d1hyha1           2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQD   48 (146)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             CeEEEEC-cCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhc
Confidence            5677888 5999999999999988  4799999999987766666654

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.36  E-value=0.017  Score=38.75  Aligned_cols=37  Identities=22%  Similarity=0.291  Sum_probs=32.4

Q ss_pred             CcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Q 032110           88 STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (147)
Q Consensus        88 ~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l  124 (147)
                      |.|-+|.++++.|.+.|++|++++|+.++.++..+++
T Consensus         7 G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           7 GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            5899999999999999999999999998877665543

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=95.30  E-value=0.05  Score=37.32  Aligned_cols=62  Identities=19%  Similarity=0.150  Sum_probs=45.2

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH------HHHHHhCCeEEEEEcc
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ------SLREEFGEQHVVQNVM  138 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~------~l~~~~~~~~~~~~~d  138 (147)
                      ..+.||+++|.| -|-+|+.+|++|...|++|+++..++-..-++.-      .+.+..+..++++.+-
T Consensus        19 ~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~mdGf~v~~~~~a~~~aDi~vTaT   86 (163)
T d1v8ba1          19 FLISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGDFFITCT   86 (163)
T ss_dssp             CCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECC
T ss_pred             ceecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHHHhcCCccCchhHccccCcEEEEcC
Confidence            468999999998 7889999999999999999999999854333221      1333344455555543

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=95.25  E-value=0.013  Score=41.03  Aligned_cols=34  Identities=24%  Similarity=0.220  Sum_probs=28.9

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      +|+++|.| +|--|+..|..|++.|++|.+++++.
T Consensus         1 ~KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            57788887 66779999999999999999998653

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.25  E-value=0.032  Score=38.89  Aligned_cols=40  Identities=25%  Similarity=0.331  Sum_probs=32.5

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~  119 (147)
                      .|.+++|.| +|++|...+..+...|+ +|++++.++++++.
T Consensus        25 ~G~tVlV~G-aG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~   65 (195)
T d1kola2          25 PGSTVYVAG-AGPVGLAAAASARLLGAAVVIVGDLNPARLAH   65 (195)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHhhcccceeeecccchhhHh
Confidence            466899997 48999998888877886 78899999877654

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.23  E-value=0.019  Score=38.30  Aligned_cols=39  Identities=23%  Similarity=0.357  Sum_probs=31.7

Q ss_pred             EEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHH
Q 032110           84 LITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQS  123 (147)
Q Consensus        84 lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~~~~  123 (147)
                      .+-| .|-+|.++++.|.+.| ++|++++|++++.++..++
T Consensus         4 ~fIG-~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           4 YFLG-GGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEC-CSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEc-CcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            3445 6999999999999888 8999999999887665443

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=95.21  E-value=0.11  Score=35.19  Aligned_cols=48  Identities=15%  Similarity=0.302  Sum_probs=38.6

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHH
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLRE  126 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r~~~~~~~~~~~l~~  126 (147)
                      ...+++.|.|+ |.+|..++..|+..|.  +++++|++++..+..+.++..
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h   67 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQH   67 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHH
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhc
Confidence            33456777785 9999999999999994  799999999888776666653

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.19  E-value=0.022  Score=38.37  Aligned_cols=38  Identities=24%  Similarity=0.295  Sum_probs=31.8

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      +-+- |.|-+|.++|+.|+++|++|.+++|+.++.+...
T Consensus         4 Ig~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~   41 (162)
T d3cuma2           4 IAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV   41 (162)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred             EEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhh
Confidence            4444 4899999999999999999999999988766543

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.10  E-value=0.023  Score=39.23  Aligned_cols=44  Identities=18%  Similarity=0.265  Sum_probs=38.3

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      ++.||.++|.|.+.-+|+.++..|.++|+.|+++......+++.
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~   77 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHH   77 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHH
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHH
Confidence            58899999999999999999999999999999988766555433

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.07  E-value=0.016  Score=38.52  Aligned_cols=33  Identities=18%  Similarity=0.266  Sum_probs=28.6

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      ++.|.|+ |.||..++..|++.|++|.+++|+++
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~   34 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQ   34 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHH
Confidence            4677775 99999999999999999999998653

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.02  E-value=0.018  Score=38.81  Aligned_cols=34  Identities=24%  Similarity=0.482  Sum_probs=30.5

Q ss_pred             CcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110           88 STKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (147)
Q Consensus        88 ~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~  121 (147)
                      |-|-+|..+|+.|++.|++|++++|++++.++..
T Consensus         7 GlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~   40 (161)
T d1vpda2           7 GLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVI   40 (161)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             ehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHH
Confidence            4789999999999999999999999998877654

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=94.99  E-value=0.036  Score=37.46  Aligned_cols=40  Identities=23%  Similarity=0.261  Sum_probs=31.9

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~  119 (147)
                      .|.+++|.| +|++|...++.+...|+ +|+++++++++++.
T Consensus        32 ~g~~vli~G-aG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~   72 (172)
T d1h2ba2          32 PGAYVAIVG-VGGLGHIAVQLLKVMTPATVIALDVKEEKLKL   72 (172)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHHCCCEEEEEESSHHHHHH
T ss_pred             CCCEEEEeC-CChHHHHHHHHHHhhcCcccccccchhHHHHH
Confidence            466889987 59999999998888885 67788988876553

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=94.96  E-value=0.036  Score=37.65  Aligned_cols=40  Identities=15%  Similarity=0.255  Sum_probs=31.4

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCE-EEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~-V~i~~r~~~~~~~  119 (147)
                      .|..++|.|+ |++|...++.+...|++ |++.++++++++.
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~   68 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLEL   68 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHH
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHH
Confidence            4567889886 89999999998888875 5667888776553

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=94.90  E-value=0.033  Score=37.49  Aligned_cols=39  Identities=21%  Similarity=0.286  Sum_probs=31.6

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVD  118 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~  118 (147)
                      .|.+++|.|+ +|+|...++.+...|+ .|+++++++++.+
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~   67 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA   67 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHH
Confidence            4668999986 6999999999999995 5777888877654

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.86  E-value=0.031  Score=36.03  Aligned_cols=35  Identities=31%  Similarity=0.410  Sum_probs=30.0

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      ++|.++|.| +|.+|.++|..|++.|.+|.++.+..
T Consensus        29 ~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecC
Confidence            456777776 88999999999999999999997754

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.78  E-value=0.023  Score=39.34  Aligned_cols=42  Identities=17%  Similarity=0.331  Sum_probs=37.8

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      ++.||.++|.|.+.=.|+.++..|+++|+.|.++......+.
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            589999999999999999999999999999999987665544

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.70  E-value=0.085  Score=33.28  Aligned_cols=33  Identities=21%  Similarity=0.362  Sum_probs=29.3

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      |.++|.| +|-+|.++|..|++.|.+|.++.|.+
T Consensus        23 ~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          23 KSLVVIG-GGYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CeEEEEC-CCccceeeeeeecccccEEEEEEecc
Confidence            5778886 88999999999999999999998765

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.68  E-value=0.037  Score=35.69  Aligned_cols=35  Identities=31%  Similarity=0.392  Sum_probs=30.5

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      .+|.++|.| +|-+|.++|..|++.|.+|.++.+.+
T Consensus        29 ~~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          29 PQSRLLIVG-GGVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCeEEEEC-cchhHHHHHHHhhcccceEEEEeecc
Confidence            356788886 89999999999999999999998765

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.63  E-value=0.12  Score=33.06  Aligned_cols=33  Identities=18%  Similarity=0.171  Sum_probs=29.2

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      |.++|.| +|-||.++|..|++.|.+|.++.|.+
T Consensus        23 k~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVG-AGYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEc-CCccHHHHHHHHhcCCcEEEEEeecc
Confidence            5788887 67899999999999999999998864

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=94.60  E-value=0.056  Score=36.15  Aligned_cols=40  Identities=30%  Similarity=0.367  Sum_probs=32.7

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAV  121 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r~~~~~~~~~  121 (147)
                      |.+.|.| .|-||..+++.|.+.|.  +|+.+|++++..+.+.
T Consensus         2 k~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~   43 (171)
T d2g5ca2           2 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV   43 (171)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH
T ss_pred             CEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHH
Confidence            3577776 69999999999999995  7888999987766543

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.41  E-value=0.087  Score=33.74  Aligned_cols=33  Identities=18%  Similarity=0.304  Sum_probs=29.1

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      |.++|.| +|-||.++|..|++.|++|.++.+.+
T Consensus        24 ~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          24 KRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CeEEEEC-CCchHHHHHHHHHhhCcceeEEEecc
Confidence            5788887 78999999999999999999988754

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.39  E-value=0.11  Score=32.77  Aligned_cols=33  Identities=18%  Similarity=0.144  Sum_probs=28.7

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      |.++|.| +|-+|.++|..|++.|.+|.++.|.+
T Consensus        22 ~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEC-CChhhHHHHHHhhccccEEEEEeecc
Confidence            4677776 88999999999999999999998864

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=94.32  E-value=0.057  Score=35.82  Aligned_cols=43  Identities=12%  Similarity=0.124  Sum_probs=34.3

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSL  124 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~~~~l  124 (147)
                      |++.|.|+ |.+|..+|..|+.++ ++++++|.+++..+....++
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl   45 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDL   45 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHh
Confidence            35666685 999999999999888 68999999888766655555

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.32  E-value=0.036  Score=36.73  Aligned_cols=35  Identities=26%  Similarity=0.271  Sum_probs=29.0

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      +.++++-.+++-||.++|..|++.|++|.++.+.+
T Consensus        40 ~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          40 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            33455556779999999999999999999998765

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.26  E-value=0.13  Score=35.47  Aligned_cols=37  Identities=19%  Similarity=0.275  Sum_probs=31.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      ..++|.++|.| +|--|++.|..|+++|++|.+++++.
T Consensus        40 ~~~~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVG-AGPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCcEEEEEC-ccHHHHHHHHHHHhhccceEEEeccC
Confidence            34567888887 67789999999999999999998864

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.25  E-value=0.12  Score=32.81  Aligned_cols=33  Identities=18%  Similarity=0.266  Sum_probs=29.2

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      +.++|.| +|-||.++|..|++.|.+|.++.+..
T Consensus        23 ~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          23 GKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CeEEEEC-CChHHHHHHHHHHHcCCceEEEEeec
Confidence            5788887 89999999999999999999988754

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.17  E-value=0.041  Score=38.33  Aligned_cols=32  Identities=22%  Similarity=0.191  Sum_probs=28.7

Q ss_pred             CcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           88 STKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        88 ~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      |.|-+|+.+|..|++.|++|+++|.+++..++
T Consensus         7 GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~   38 (202)
T d1mv8a2           7 GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDL   38 (202)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHH
Confidence            58999999999999999999999998876554

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=94.06  E-value=0.083  Score=34.80  Aligned_cols=41  Identities=7%  Similarity=0.166  Sum_probs=32.7

Q ss_pred             EEEeCCcChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHH
Q 032110           83 VLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSL  124 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~~~~~~~~~~~l  124 (147)
                      +.|.|+ |.+|..++..|+..|  .+++++|++++.++....++
T Consensus         3 I~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~   45 (142)
T d1guza1           3 ITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDM   45 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHH
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhh
Confidence            556685 999999999999998  48999999988766544443

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.04  E-value=0.1  Score=34.69  Aligned_cols=45  Identities=18%  Similarity=0.346  Sum_probs=35.2

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCC--CEEEEEeCChH--HHHHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAE--RVDSAVQSLRE  126 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~~~--~~~~~~~~l~~  126 (147)
                      ++.|.|++|.+|..++..|+.+|  .+++++|++++  +++....++..
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~   50 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYD   50 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchh
Confidence            47899999999999999999999  48999998863  34444455543

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.01  E-value=0.11  Score=33.07  Aligned_cols=34  Identities=21%  Similarity=0.228  Sum_probs=29.5

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      .|.++|.| +|-+|.++|..|++.|.+|.++.|.+
T Consensus        22 p~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVG-SGYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEEC-CchHHHHHHHHHHhccccceeeehhc
Confidence            35778886 78999999999999999999998854

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=93.95  E-value=0.035  Score=39.58  Aligned_cols=34  Identities=29%  Similarity=0.371  Sum_probs=28.8

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      +.|.|+|.| +|--|+..|..|+++|++|.+++++
T Consensus        29 ~pkkV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~   62 (370)
T d2iida1          29 NPKHVVIVG-AGMAGLSAAYVLAGAGHQVTVLEAS   62 (370)
T ss_dssp             SCCEEEEEC-CBHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCC
Confidence            346788887 6677999999999999999999864

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=93.93  E-value=0.11  Score=34.75  Aligned_cols=42  Identities=12%  Similarity=0.228  Sum_probs=34.1

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSL  124 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~~~~l  124 (147)
                      ++.|.| +|.+|..++..|...+ .+++++|++++..+....++
T Consensus         5 KI~IIG-aG~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl   47 (150)
T d1t2da1           5 KIVLVG-SGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDT   47 (150)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHH
T ss_pred             eEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecch
Confidence            567778 5999999999888888 68999999988776665555

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.92  E-value=0.051  Score=37.50  Aligned_cols=38  Identities=16%  Similarity=0.168  Sum_probs=34.4

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      .++.||.++|.|.+.=+|+.++..|+++|+.|.++..+
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            47899999999999999999999999999999887643

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.88  E-value=0.13  Score=32.29  Aligned_cols=33  Identities=21%  Similarity=0.361  Sum_probs=28.4

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      |.++|.| +|-+|.++|..|++.|++|.++.+.+
T Consensus        22 ~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          22 QHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHhhcccceEEEeeec
Confidence            4677775 89999999999999999999988754

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.86  E-value=0.047  Score=34.99  Aligned_cols=34  Identities=32%  Similarity=0.387  Sum_probs=29.6

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      +|.++|.| +|-+|.++|..|++.|.+|.++.+.+
T Consensus        32 ~~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEEC-CcHHHHHHHHHhhcccceEEEEeccc
Confidence            35677776 89999999999999999999998764

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=93.72  E-value=0.023  Score=40.94  Aligned_cols=37  Identities=14%  Similarity=0.214  Sum_probs=30.7

Q ss_pred             CCCEEEEeCCcChHHHHH-----HHHHHHCCCEEEEEeCChH
Q 032110           79 PPYNVLITGSTKGIGYAL-----AKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~-----a~~La~~Ga~V~i~~r~~~  115 (147)
                      .++.++|+.|-||.|+.+     |..|+++|.+|.++|.+++
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            455677777799999987     6899999999999998864

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.71  E-value=0.057  Score=35.76  Aligned_cols=35  Identities=14%  Similarity=0.121  Sum_probs=28.7

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      +.+|  |.|-+|..+++.|.++|++|++.+++.+...
T Consensus         3 IgiI--G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~   37 (152)
T d1i36a2           3 VGFI--GFGEVAQTLASRLRSRGVEVVTSLEGRSPST   37 (152)
T ss_dssp             EEEE--SCSHHHHHHHHHHHHTTCEEEECCTTCCHHH
T ss_pred             EEEE--cHHHHHHHHHHHHHHCCCeEEEEcCchhHHH
Confidence            4444  5799999999999999999999988765544

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.63  E-value=0.079  Score=33.46  Aligned_cols=35  Identities=17%  Similarity=0.288  Sum_probs=30.7

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      .+|.++|.| +|-+|.++|..|+..|.+|.++.+.+
T Consensus        21 ~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          21 PGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccc
Confidence            467888887 88999999999999999999998864

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=93.59  E-value=0.32  Score=32.11  Aligned_cols=44  Identities=20%  Similarity=0.387  Sum_probs=35.2

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLRE  126 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r~~~~~~~~~~~l~~  126 (147)
                      ++.|.|+ |.+|..++..|+.+|.  +++++|++++..+..+.++..
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~   48 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQH   48 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHh
Confidence            4566685 9999999999999984  799999999887666555653

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.58  E-value=0.043  Score=36.99  Aligned_cols=34  Identities=12%  Similarity=0.196  Sum_probs=28.3

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCE-EEEEeCCh
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSA  114 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~-V~i~~r~~  114 (147)
                      +|+++|.| +|-.|+..|..|+++|++ |.++++..
T Consensus         4 ~~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLG-AGPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            45677776 788899999999999985 98988764

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.52  E-value=0.21  Score=32.77  Aligned_cols=43  Identities=19%  Similarity=0.296  Sum_probs=34.5

Q ss_pred             EEEeCCcChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHH
Q 032110           83 VLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLRE  126 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~~~~~~~~~~~l~~  126 (147)
                      +.|.|+ |.+|..++..++.++  .+++++|++++.++....++..
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~   47 (140)
T d1a5za1           3 IGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIH   47 (140)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccc
Confidence            455685 899999999999888  4799999999887766666554

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=93.48  E-value=0.089  Score=35.26  Aligned_cols=40  Identities=18%  Similarity=0.321  Sum_probs=31.7

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~  119 (147)
                      .|.+++|.| .+|+|...+..++..|+ +|++.++++++++.
T Consensus        28 ~g~~VlI~G-~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~   68 (175)
T d1cdoa2          28 PGSTCAVFG-LGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEK   68 (175)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHH
T ss_pred             CCCEEEEEe-cCCccchHHHHHHHHhhchheeecchHHHHHH
Confidence            456888997 57788888888888885 68889999887654

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=93.41  E-value=0.043  Score=38.96  Aligned_cols=31  Identities=23%  Similarity=0.289  Sum_probs=27.3

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      ++|.| +|-.|..+|..|+++|.+|++++++.
T Consensus         7 vvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIG-GGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            67776 78899999999999999999998753

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.41  E-value=0.13  Score=35.43  Aligned_cols=40  Identities=18%  Similarity=0.146  Sum_probs=34.4

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~  116 (147)
                      ..+.+|++.|.| .|.||+++++.+...|.+|+..++....
T Consensus        40 ~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          40 TEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             ccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCCh
Confidence            357788988887 8999999999999999999999886543

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.26  E-value=0.086  Score=37.59  Aligned_cols=56  Identities=27%  Similarity=0.327  Sum_probs=42.8

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC-------------------hHHHHHHHHHHHHHhCCeEEE
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-------------------AERVDSAVQSLREEFGEQHVV  134 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~-------------------~~~~~~~~~~l~~~~~~~~~~  134 (147)
                      +++++++|.| .||+|..++..|+..|. ++.++|.+                   ..+.+.+.+.+.+.++...+.
T Consensus        28 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~  103 (247)
T d1jw9b_          28 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAIT  103 (247)
T ss_dssp             HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEE
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchh
Confidence            5677899998 89999999999999995 78888753                   225566667777777765443

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=93.22  E-value=0.056  Score=34.73  Aligned_cols=33  Identities=15%  Similarity=0.337  Sum_probs=29.3

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      |.++|.| +|-||.++|..|.+.|.+|.++.|.+
T Consensus        26 ~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          26 KKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             SEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEcc
Confidence            5777776 89999999999999999999998754

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.18  E-value=0.093  Score=34.12  Aligned_cols=35  Identities=23%  Similarity=0.305  Sum_probs=30.3

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      .+|.++|.| +|-+|.++|..|++.|.+|.++.+.+
T Consensus        34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeecc
Confidence            356788886 89999999999999999999998754

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=92.94  E-value=0.19  Score=34.52  Aligned_cols=38  Identities=24%  Similarity=0.282  Sum_probs=33.9

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      .+.||++.|-| .|.||..+++.+...|++|+.+++...
T Consensus        39 ~l~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          39 LIQGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCTTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCceEEEec-cccccccceeeeecccccccccccccc
Confidence            47899999998 677999999999999999999998653

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=92.93  E-value=0.29  Score=32.31  Aligned_cols=44  Identities=11%  Similarity=0.144  Sum_probs=33.4

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCC--EEEEEeCC--hHHHHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGD--NVIICSRS--AERVDSAVQSLR  125 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r~--~~~~~~~~~~l~  125 (147)
                      ++.|.|++|.+|..++..+..+|.  +++++|.+  ++..+..+.++.
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~   49 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTN   49 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHH
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchh
Confidence            478999999999999999999983  69999864  344444444554

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=92.84  E-value=0.19  Score=34.36  Aligned_cols=43  Identities=12%  Similarity=0.192  Sum_probs=30.3

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCC-------EEEEEeCCh--HHHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGD-------NVIICSRSA--ERVDSAVQSL  124 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga-------~V~i~~r~~--~~~~~~~~~l  124 (147)
                      .+.||||+|.||+.++..|++...       .+.+.+.+.  +.++...-++
T Consensus        26 kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl   77 (175)
T d7mdha1          26 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMEL   77 (175)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhh
Confidence            699999999999999999997432       455666554  3344444444

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=92.84  E-value=0.19  Score=34.94  Aligned_cols=38  Identities=21%  Similarity=0.139  Sum_probs=34.1

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      ..+.||++.|.| .|.||+.+++.+...|++|+..++..
T Consensus        45 ~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~   82 (193)
T d1mx3a1          45 ARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYL   82 (193)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTS
T ss_pred             eeeeCceEEEec-cccccccceeeeeccccceeeccCcc
Confidence            458899999997 89999999999999999999998754

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.73  E-value=0.086  Score=33.80  Aligned_cols=32  Identities=22%  Similarity=0.224  Sum_probs=28.1

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      |.++|.| +|-||.++|..|.+.|++|.++.++
T Consensus        21 ~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence            3577776 8999999999999999999999876

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.70  E-value=0.19  Score=33.13  Aligned_cols=43  Identities=14%  Similarity=0.135  Sum_probs=34.4

Q ss_pred             EEEeCCcChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHH
Q 032110           83 VLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLRE  126 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~~~~~~~~~~~l~~  126 (147)
                      +.|.|+ |.+|..++..|+.+|  .+++++|++++..+..+.++..
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~   47 (142)
T d1ojua1           3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAH   47 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             EEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhh
Confidence            556685 999999999999888  4699999999887766666643

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=92.66  E-value=0.034  Score=35.85  Aligned_cols=54  Identities=13%  Similarity=0.107  Sum_probs=38.1

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK  144 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~  144 (147)
                      |.++|.| .+.+|..+++.|.  |.+|++++.+++..+..    ... +  ..++..|.+++..
T Consensus         1 kHivI~G-~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~----~~~-~--~~~i~Gd~~~~~~   54 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLRELR--GSEVFVLAEDENVRKKV----LRS-G--ANFVHGDPTRVSD   54 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTSC--GGGEEEEESCTTHHHHH----HHT-T--CEEEESCTTSHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHc--CCCCEEEEcchHHHHHH----Hhc-C--ccccccccCCHHH
Confidence            4678887 6889999999994  56688888888765533    221 2  3566788877543

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.60  E-value=0.072  Score=35.80  Aligned_cols=31  Identities=19%  Similarity=0.236  Sum_probs=27.2

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      ++|.| +|--|+.+|..|+++|.+|.++.++.
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            67776 77789999999999999999998864

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=92.56  E-value=0.095  Score=38.83  Aligned_cols=34  Identities=21%  Similarity=0.358  Sum_probs=29.1

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      .|.++|.| +|--|+.+|+.|++.|.+|.++..+.
T Consensus         2 ~KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCC
Confidence            57788887 67789999999999999999987654

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.46  E-value=0.21  Score=37.17  Aligned_cols=35  Identities=11%  Similarity=0.233  Sum_probs=30.9

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEe
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS  111 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~  111 (147)
                      ..++||+++|.| .|-+|..+|+.|.+.|++|+.++
T Consensus        32 ~~L~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          32 PGFGDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SSSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEE
Confidence            468999999998 68999999999999999987654

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=92.45  E-value=0.1  Score=36.44  Aligned_cols=34  Identities=24%  Similarity=0.257  Sum_probs=28.5

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      ++++|.| +|--|+.+|..|+++|.+|++++++.+
T Consensus         5 ~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           5 DRIAVVG-GSISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            4678887 667799999999999999999998643

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=92.35  E-value=0.21  Score=32.11  Aligned_cols=34  Identities=21%  Similarity=0.323  Sum_probs=29.6

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      .|.++|.| +|-||.++|..|...|.+|.++.+.+
T Consensus        26 p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeec
Confidence            35788887 88999999999999999999997754

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.33  E-value=0.15  Score=33.87  Aligned_cols=37  Identities=16%  Similarity=0.183  Sum_probs=31.4

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCC--EEEEEeCChHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVD  118 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r~~~~~~  118 (147)
                      ++.|.|++|.+|..++..|+.+|.  ++++.|.++.+.+
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~   40 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV   40 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh
Confidence            578999999999999999999984  6999999875543

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=92.30  E-value=0.1  Score=34.56  Aligned_cols=43  Identities=14%  Similarity=0.152  Sum_probs=31.5

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLR  125 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r~~~~~~~~~~~l~  125 (147)
                      ++.|.|+ |.+|..++..++.++.  +++++|++++.++..+.++.
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~   47 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDIN   47 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHT
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeec
Confidence            3555585 9999999999999884  79999999987665555554

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=92.28  E-value=0.13  Score=34.25  Aligned_cols=43  Identities=19%  Similarity=0.090  Sum_probs=35.8

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l  124 (147)
                      +|+.++..|++.|   ..+..|+++|++|+.+|.++..++.+.+..
T Consensus        20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~   62 (201)
T d1pjza_          20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTER   62 (201)
T ss_dssp             TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHH
T ss_pred             CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHh
Confidence            5678999998888   366788999999999999998888775554

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=92.27  E-value=0.11  Score=33.96  Aligned_cols=35  Identities=20%  Similarity=0.157  Sum_probs=29.1

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCC--EEEEEeCCh
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSA  114 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r~~  114 (147)
                      .||.++|.| +|-.|.++|..|.+.+.  +|+++++++
T Consensus         1 ~gkrivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            478999998 67789999999999884  788887664

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.25  E-value=0.35  Score=35.41  Aligned_cols=60  Identities=22%  Similarity=0.162  Sum_probs=38.9

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHHHh-CCeEEEEEcccCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEF-GEQHVVQNVMLAK  141 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~~~dv~~  141 (147)
                      .++|+++-.|++.|+   ++..+++.|+ +|+.++.++.. ..+.+...+.. .....+++.|+.+
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~~~~~i~~~~~~~~~   95 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNKLEDTITLIKGKIEE   95 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTTCTTTEEEEESCTTT
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhCCCccceEEEeeHHH
Confidence            578899999988775   4556777886 79999988754 33333333322 2335566676665

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.21  E-value=0.19  Score=35.09  Aligned_cols=36  Identities=22%  Similarity=0.294  Sum_probs=30.4

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      -.+|.++|.| +|-.|+..|..|+++|++|.+++++.
T Consensus        47 ~~~k~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVG-AGPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCceEEEEc-ccHHHHHHHHHHHHhccceeeEeecc
Confidence            4567888887 66779999999999999999998754

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=91.94  E-value=0.13  Score=35.98  Aligned_cols=38  Identities=21%  Similarity=0.147  Sum_probs=33.8

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      .+.||++.|.| .|.||+.+++.|...|++|+..++...
T Consensus        40 el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          40 EVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCCeEEEec-ccccchhHHHhHhhhcccccccCcccc
Confidence            47899999997 899999999999999999999987543

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.87  E-value=0.14  Score=34.12  Aligned_cols=43  Identities=21%  Similarity=0.356  Sum_probs=29.9

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCC---------EEEEEeCChHHHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGD---------NVIICSRSAERVDSAVQSL  124 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga---------~V~i~~r~~~~~~~~~~~l  124 (147)
                      ++.|+|++|.+|..++..|+..+.         +++..+.+.+.++....++
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~   57 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMEL   57 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhh
Confidence            689999999999999999998663         2223344555555544444

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=91.84  E-value=0.41  Score=32.71  Aligned_cols=39  Identities=15%  Similarity=0.104  Sum_probs=34.2

Q ss_pred             CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      ...+.++++.|.| .|.||.++++.|...|.+|+..++..
T Consensus        39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          39 AYDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             ceeccccceeecc-ccccchhhhhhhhccCceEEEEeecc
Confidence            3467899999997 89999999999999999999999753

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.78  E-value=0.17  Score=35.27  Aligned_cols=31  Identities=26%  Similarity=0.330  Sum_probs=26.0

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSR  112 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r  112 (147)
                      +.|+|.| +|=-|+..|..|+++|++|.|+..
T Consensus         6 ~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa   36 (449)
T d2dw4a2           6 GKVIIIG-SGVSGLAAARQLQSFGMDVTLLEA   36 (449)
T ss_dssp             CEEEEEC-CBHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeC
Confidence            3577777 666799999999999999999854

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=91.59  E-value=0.1  Score=37.13  Aligned_cols=30  Identities=20%  Similarity=0.412  Sum_probs=26.2

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      ++|.| +|-.|..+|+.|+++|.+|+++++.
T Consensus         6 vvIIG-aGi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVG-AGSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCC
Confidence            66776 7888999999999999999999874

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=91.59  E-value=0.16  Score=36.68  Aligned_cols=34  Identities=29%  Similarity=0.234  Sum_probs=30.5

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEe
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS  111 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~  111 (147)
                      +++||+++|-| .|-.|..+++.|.+.|++|+.++
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            68899999997 89999999999999999987644

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=91.55  E-value=0.13  Score=35.81  Aligned_cols=38  Identities=29%  Similarity=0.235  Sum_probs=33.7

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      ..+.||++.|.| .|.||+.+++.|...|++|+..++..
T Consensus        41 ~~l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~   78 (199)
T d1dxya1          41 KELGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYP   78 (199)
T ss_dssp             CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccceeeeeee-cccccccccccccccceeeeccCCcc
Confidence            357889999997 89999999999999999999998754

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=91.05  E-value=0.9  Score=30.56  Aligned_cols=60  Identities=15%  Similarity=0.061  Sum_probs=41.3

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAK  141 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~  141 (147)
                      .++.++=.|++.|.   .+..|+++|++|+.+|.+++.++.+.+......-....+...|+.+
T Consensus        30 ~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~   89 (198)
T d2i6ga1          30 APGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNT   89 (198)
T ss_dssp             CSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTT
T ss_pred             CCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheeccc
Confidence            44578888876553   4567889999999999999888877555544332334555666554

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=90.95  E-value=0.13  Score=37.06  Aligned_cols=30  Identities=27%  Similarity=0.478  Sum_probs=25.7

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC
Q 032110           83 VLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~  113 (147)
                      ++|.| +|-+|.++|+.|+++|. +|++++++
T Consensus         4 ViIIG-aGi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           4 IVIIG-AGIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            56666 78999999999999996 69999876

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=90.48  E-value=0.071  Score=36.33  Aligned_cols=31  Identities=16%  Similarity=0.200  Sum_probs=26.5

Q ss_pred             CEEEEeCCcChHHHHH-----HHHHHHCCCEEEEEe
Q 032110           81 YNVLITGSTKGIGYAL-----AKEFLKAGDNVIICS  111 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~-----a~~La~~Ga~V~i~~  111 (147)
                      |.++|||.+.|.|+.+     ++.|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            6899999777998864     588999999999876

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.21  E-value=1  Score=31.19  Aligned_cols=63  Identities=14%  Similarity=-0.010  Sum_probs=43.6

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAK  141 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~  141 (147)
                      +|.+++-.|++.|--.+..-.+...+.+|+.++.+++.++.+.+.+....-....++..|..+
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~  137 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYY  137 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHH
Confidence            456888888777655554444444556999999999988888777766544455666666654

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.82  E-value=0.23  Score=33.69  Aligned_cols=32  Identities=28%  Similarity=0.434  Sum_probs=27.5

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      +.|-| +|.+|.++|..|++.|.+|.+++|..+
T Consensus         3 I~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           3 VSILG-AGAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEES-CCHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEEC-CCHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            55665 799999999999999999999998544

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=89.80  E-value=0.13  Score=35.47  Aligned_cols=35  Identities=17%  Similarity=0.210  Sum_probs=29.4

Q ss_pred             CCEEEEeCCcChHHHH-----HHHHHHHCCCEEEEEeCCh
Q 032110           80 PYNVLITGSTKGIGYA-----LAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~-----~a~~La~~Ga~V~i~~r~~  114 (147)
                      +|++.|+++.||.|+.     +|..|++.|.+|.++|-+.
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~   41 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL   41 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            6789999999998875     4678889999999998653

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=89.76  E-value=0.22  Score=36.20  Aligned_cols=34  Identities=18%  Similarity=0.294  Sum_probs=30.1

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEE
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC  110 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~  110 (147)
                      .+++||+++|.| .|-.|..+++.|.+.|++|+.+
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvav   65 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTL   65 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEE
Confidence            358899999998 7999999999999999997754

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=89.75  E-value=0.9  Score=31.79  Aligned_cols=62  Identities=27%  Similarity=0.230  Sum_probs=45.8

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG  142 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~  142 (147)
                      ++..++..|++.|--.++.-.|+  |.+|+.++++++-.+.+.+.+.+..-....+++.|+.++
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g  139 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG  139 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccC
Confidence            45678989988887777766665  467999999987777666666655446677888887764

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=89.41  E-value=0.46  Score=32.71  Aligned_cols=38  Identities=24%  Similarity=0.113  Sum_probs=33.6

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      ..+.||++-|.| .|.||..+++.+...|.+|+..++..
T Consensus        43 ~~l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~   80 (191)
T d1gdha1          43 EKLDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHR   80 (191)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSC
T ss_pred             ceecccceEEee-cccchHHHHHHHHhhccccccccccc
Confidence            457899999997 89999999999999999999998754

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.34  E-value=0.33  Score=33.78  Aligned_cols=43  Identities=16%  Similarity=0.094  Sum_probs=35.1

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l  124 (147)
                      .++.++.-|++.|   ..+..|++.|++|+.+|.+++.++.+.++.
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~   87 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQ   87 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHh
Confidence            5678999998887   457888999999999999998877665543

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=89.33  E-value=0.29  Score=33.33  Aligned_cols=35  Identities=20%  Similarity=0.260  Sum_probs=28.1

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~  119 (147)
                      +++| | .|-+|+.+|..|+ +|++|+..|.+++..++
T Consensus         3 I~Vi-G-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~   37 (196)
T d1dlja2           3 IAVA-G-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDK   37 (196)
T ss_dssp             EEEE-C-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHH
T ss_pred             EEEE-C-CChhHHHHHHHHH-CCCcEEEEECCHHHHHH
Confidence            4444 5 8999999998775 69999999999876654

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=89.24  E-value=1.1  Score=30.35  Aligned_cols=59  Identities=14%  Similarity=-0.004  Sum_probs=40.9

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCC
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAK  141 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~  141 (147)
                      +..++=.|++.|.-   +..|+++|++|+.+|.+++.++.+.+.+.........++..|..+
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~   74 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQ   74 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-C
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccccccccccccccccc
Confidence            45788888877743   456788999999999999888776555544433334566676664

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=89.16  E-value=0.19  Score=34.63  Aligned_cols=30  Identities=23%  Similarity=0.361  Sum_probs=25.6

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      ++|.| +|--|+..|..|+++|++|.++.++
T Consensus         3 V~IIG-aG~aGL~aA~~L~~~G~~V~vlE~~   32 (347)
T d2ivda1           3 VAVVG-GGISGLAVAHHLRSRGTDAVLLESS   32 (347)
T ss_dssp             EEEEC-CBHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEEC-CCHHHHHHHHHHHhCCCCEEEEecC
Confidence            66776 5677999999999999999999875

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=89.12  E-value=1.4  Score=29.54  Aligned_cols=57  Identities=14%  Similarity=-0.058  Sum_probs=41.6

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCC
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAK  141 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~  141 (147)
                      ..++=.|++.|.   .+..|++.|++|+.+|.+++.++.+.+.+...... ...+..|..+
T Consensus        39 ~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~-~~~~~~d~~~   95 (226)
T d1ve3a1          39 GKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESN-VEFIVGDARK   95 (226)
T ss_dssp             CEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC-CEEEECCTTS
T ss_pred             CEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccccc-cccccccccc
Confidence            468888988875   55678899999999999998888776655554333 4455566654

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=88.85  E-value=0.28  Score=35.25  Aligned_cols=32  Identities=22%  Similarity=0.318  Sum_probs=21.9

Q ss_pred             CEEEEeC-CcChH---HHHHHHHHHHCCCEEEEEeC
Q 032110           81 YNVLITG-STKGI---GYALAKEFLKAGDNVIICSR  112 (147)
Q Consensus        81 k~~lVTG-~s~GI---G~~~a~~La~~Ga~V~i~~r  112 (147)
                      |+++|++ |+||-   ..+++++|.++|++|.+++.
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~   36 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGT   36 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEe
Confidence            3455554 44444   44688999999999987654

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=88.41  E-value=1.4  Score=30.36  Aligned_cols=59  Identities=15%  Similarity=0.017  Sum_probs=42.8

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAK  141 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~  141 (147)
                      +.+.++=.|++.|   ..+..|+++|++|+.+|.+++.++.+.+.+.....+ ..+...|..+
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~-i~~~~~d~~~   99 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLK-IEFLQGDVLE   99 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC-CEEEESCGGG
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeecccccccccccccccccc-chheehhhhh
Confidence            4557888887776   345678899999999999998887776666554333 4566777654

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=88.34  E-value=0.66  Score=30.52  Aligned_cols=42  Identities=24%  Similarity=0.334  Sum_probs=30.9

Q ss_pred             EEEEeCCcChHHHHHHHHHHHC---CCEEEEEeCChHHHHHHHHHH
Q 032110           82 NVLITGSTKGIGYALAKEFLKA---GDNVIICSRSAERVDSAVQSL  124 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~---Ga~V~i~~r~~~~~~~~~~~l  124 (147)
                      ++.|.|++|.+|..++..|+.+   +.++++.|..+ ..+..+.++
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl   46 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDL   46 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHH
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHH
Confidence            4779999999999999988643   36899999865 344333444

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=88.33  E-value=0.57  Score=31.93  Aligned_cols=38  Identities=18%  Similarity=-0.019  Sum_probs=33.3

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      ..+.++++.|-| .|.||..+++.+...|.+|+..++..
T Consensus        40 ~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          40 FEARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccceEEEEee-cccchhhhhhhcccccceEeeccccc
Confidence            357888888886 89999999999999999999998754

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=88.13  E-value=0.28  Score=35.26  Aligned_cols=30  Identities=27%  Similarity=0.562  Sum_probs=26.3

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      ++|.| +|..|+..|..|+++|++|+++++.
T Consensus        19 VlVIG-~G~aGl~aA~~la~~G~~V~lvEK~   48 (308)
T d1y0pa2          19 VVVVG-SGGAGFSAAISATDSGAKVILIEKE   48 (308)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEecC
Confidence            67776 7888999999999999999998864

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=88.00  E-value=0.11  Score=34.07  Aligned_cols=37  Identities=16%  Similarity=0.070  Sum_probs=27.0

Q ss_pred             CcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Q 032110           88 STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (147)
Q Consensus        88 ~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l  124 (147)
                      |.|-+|.++++.|.+.+..+.+++|+.++++++.++.
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~   42 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVY   42 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHT
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcc
Confidence            5788999999988765444568999999988776654

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.82  E-value=0.25  Score=38.42  Aligned_cols=54  Identities=20%  Similarity=0.355  Sum_probs=40.4

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC-------------------hHHHHHHHHHHHHHhCCeE
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-------------------AERVDSAVQSLREEFGEQH  132 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~-------------------~~~~~~~~~~l~~~~~~~~  132 (147)
                      +.+..++|.| .||+|.++++.|+..|. ++.++|.+                   ..+.+.+.+.+.+.++...
T Consensus        35 l~~~kVlvvG-~GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~  108 (426)
T d1yovb1          35 LDTCKVLVIG-AGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCN  108 (426)
T ss_dssp             HHHCCEEEEC-SSTTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCC
T ss_pred             HhcCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCc
Confidence            4555788888 68899999999999995 68888753                   1245666677777777654

>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Azotobacter vinelandii [TaxId: 354]

Probab=87.77  E-value=0.14  Score=37.04  Aligned_cols=34  Identities=24%  Similarity=0.387  Sum_probs=28.1

Q ss_pred             CEEEEeCCcChHHHHH-----HHHHHHCCCEEEEEeCChH
Q 032110           81 YNVLITGSTKGIGYAL-----AKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~-----a~~La~~Ga~V~i~~r~~~  115 (147)
                      |+++|.| -||.|+.+     |..|++.|++|.++|-+++
T Consensus         3 r~Iaisg-KGGVGKTT~a~NLA~~LA~~G~rVLlID~DpQ   41 (289)
T d2afhe1           3 RQCAIYG-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDPK   41 (289)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred             cEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEEEecCCC
Confidence            4677887 89988875     6889999999999998753

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=87.74  E-value=0.12  Score=36.85  Aligned_cols=34  Identities=21%  Similarity=0.385  Sum_probs=27.9

Q ss_pred             CEEEEeCCcChHHHHH-----HHHHHHCCCEEEEEeCChH
Q 032110           81 YNVLITGSTKGIGYAL-----AKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~-----a~~La~~Ga~V~i~~r~~~  115 (147)
                      |++.|+| -||.|+.+     +..|++.|.+|.++|.+.+
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            5777887 89988765     4689999999999998754

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.56  E-value=0.33  Score=34.45  Aligned_cols=30  Identities=30%  Similarity=0.361  Sum_probs=25.0

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      ++|.| +|=-|+..|..|+++|.+|.++.++
T Consensus         2 ViVIG-aG~aGL~aA~~L~~~G~~V~VlE~~   31 (383)
T d2v5za1           2 VVVVG-GGISGMAAAKLLHDSGLNVVVLEAR   31 (383)
T ss_dssp             EEEEC-CBHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEEC-CCHHHHHHHHHHHhCCCCEEEEecC
Confidence            46666 6667999999999999999998753

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=87.43  E-value=0.54  Score=30.99  Aligned_cols=33  Identities=21%  Similarity=0.330  Sum_probs=26.3

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCC-------EEEEEeCCh
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGD-------NVIICSRSA  114 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga-------~V~i~~r~~  114 (147)
                      ++.|+|++|.+|..++..|+..+-       .+++.+.++
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~   44 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITP   44 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCcc
Confidence            689999999999999999987542       466666654

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=87.42  E-value=2.1  Score=29.28  Aligned_cols=60  Identities=22%  Similarity=0.073  Sum_probs=43.4

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAK  141 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~  141 (147)
                      .|.+++=.|++.|.   ++..|++.+++|+.+|.+++.++.+.+.+.+..-....++..|..+
T Consensus        16 ~~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~   75 (234)
T d1xxla_          16 AEHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAES   75 (234)
T ss_dssp             TTCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTB
T ss_pred             CCCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhccccccccccccccccc
Confidence            35578888988774   3456777889999999999888877666665544446677777654

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=87.29  E-value=0.36  Score=33.39  Aligned_cols=31  Identities=23%  Similarity=0.351  Sum_probs=26.4

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      ++|.| +|--|+.+|..|+++|.+|++++++.
T Consensus         5 ViIIG-aG~aGl~aA~~la~~G~~V~liEk~~   35 (251)
T d2i0za1           5 VIVIG-GGPSGLMAAIGAAEEGANVLLLDKGN   35 (251)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            56776 56788999999999999999998764

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=87.26  E-value=0.17  Score=34.81  Aligned_cols=34  Identities=18%  Similarity=0.341  Sum_probs=28.5

Q ss_pred             CEEEEeCCcChHHHH-----HHHHHHHCCCEEEEEeCCh
Q 032110           81 YNVLITGSTKGIGYA-----LAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        81 k~~lVTG~s~GIG~~-----~a~~La~~Ga~V~i~~r~~  114 (147)
                      |++.|+++.||.|+.     +|..|++.|.+|.++|-+.
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            689999999998775     4678999999999998764

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=86.97  E-value=0.82  Score=31.74  Aligned_cols=60  Identities=15%  Similarity=0.029  Sum_probs=44.8

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAK  141 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~  141 (147)
                      ..++.++=.|++.|.   .+..|+++|.+|+.+|.+++.++.+.+.+.....+ ..++..|+.+
T Consensus        36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~-v~~~~~d~~~   95 (246)
T d1y8ca_          36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLK-PRLACQDISN   95 (246)
T ss_dssp             CCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCC-CEEECCCGGG
T ss_pred             CCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCcc-ceeeccchhh
Confidence            456789999988874   67788999999999999999888776655544333 4566666654

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=86.84  E-value=0.4  Score=31.90  Aligned_cols=31  Identities=26%  Similarity=0.413  Sum_probs=25.1

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCC-EEEEEeCCh
Q 032110           83 VLITGSTKGIGYALAKEFLKAGD-NVIICSRSA  114 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~  114 (147)
                      ++|.| +|--|+.+|..|+++|. +|.++.++.
T Consensus         3 V~IIG-aG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           3 VIVVG-AGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             EEEEC-CBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             EEEEC-CcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            56666 66779999999999996 699988754

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=86.59  E-value=0.33  Score=31.92  Aligned_cols=30  Identities=30%  Similarity=0.182  Sum_probs=24.4

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEE
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIIC  110 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~  110 (147)
                      ++.++|.| +|-+|.++|..|.+.|.++.++
T Consensus         3 ~~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           3 NDNVVIVG-TGLAGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCEEEEC-CcHHHHHHHHHHHHcCCceEEE
Confidence            45777876 8899999999999999775443

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=86.44  E-value=1.4  Score=26.70  Aligned_cols=38  Identities=18%  Similarity=0.223  Sum_probs=27.8

Q ss_pred             CCCEEEEeCCcChHH-HHHHHHHHHCCCEEEEEeCChHHH
Q 032110           79 PPYNVLITGSTKGIG-YALAKEFLKAGDNVIICSRSAERV  117 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG-~~~a~~La~~Ga~V~i~~r~~~~~  117 (147)
                      ..|.+.+.| -+|+| .++|+.|.++|+.|...|+.....
T Consensus         7 ~~~~ihfiG-igG~GMs~LA~~L~~~G~~VsGSD~~~~~~   45 (96)
T d1p3da1           7 RVQQIHFIG-IGGAGMSGIAEILLNEGYQISGSDIADGVV   45 (96)
T ss_dssp             TCCEEEEET-TTSTTHHHHHHHHHHHTCEEEEEESCCSHH
T ss_pred             hCCEEEEEE-ECHHHHHHHHHHHHhCCCEEEEEeCCCChh
Confidence            345677776 34444 556999999999999999876443

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=86.31  E-value=0.35  Score=33.92  Aligned_cols=34  Identities=21%  Similarity=0.281  Sum_probs=28.4

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~  117 (147)
                      ++|.| +|--|+..|..|+++|.+|.+++++....
T Consensus         7 ViIIG-aG~aGl~aA~~la~~G~~V~vlEk~~~~G   40 (253)
T d2gqfa1           7 NIIIG-AGAAGLFCAAQLAKLGKSVTVFDNGKKIG   40 (253)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEecCCCCC
Confidence            66776 67778999999999999999999876543

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.07  E-value=0.87  Score=33.40  Aligned_cols=29  Identities=31%  Similarity=0.258  Sum_probs=24.0

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEe
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICS  111 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~  111 (147)
                      .+=.-++|..|.++|+++..+|+.|+++.
T Consensus        39 ~ItN~SSGk~G~alA~~~~~~Ga~V~li~   67 (290)
T d1p9oa_          39 FLDNFSSGRRGATSAEAFLAAGYGVLFLY   67 (290)
T ss_dssp             EEEECCCCHHHHHHHHHHHHTTCEEEEEE
T ss_pred             EeCCCCchHHHHHHHHHHHHcCCEEEEEe
Confidence            34445678899999999999999999874

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=85.81  E-value=0.39  Score=34.83  Aligned_cols=30  Identities=37%  Similarity=0.527  Sum_probs=26.1

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      ++|.| +|.-|+..|..|+++|++|+++.+.
T Consensus        26 VvVIG-~G~aGl~aA~~la~~G~~V~llEk~   55 (322)
T d1d4ca2          26 VVIIG-SGGAGLAAAVSARDAGAKVILLEKE   55 (322)
T ss_dssp             EEEEC-SSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCC
Confidence            66666 7888999999999999999999864

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=84.78  E-value=2  Score=31.16  Aligned_cols=60  Identities=27%  Similarity=0.221  Sum_probs=38.0

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHH-HhCCeEEEEEcccCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLRE-EFGEQHVVQNVMLAK  141 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~l~~-~~~~~~~~~~~dv~~  141 (147)
                      .+||+++-.|++.|+   ++..+++.|+ +|+.++.++. ...+.+.... ...+...+++.|..+
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~   93 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEE   93 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTT
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHH
Confidence            468899999988775   4556777885 6888997753 3333333322 223335666777665

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=84.54  E-value=1.9  Score=30.79  Aligned_cols=62  Identities=15%  Similarity=0.233  Sum_probs=43.5

Q ss_pred             CCCEEEEeCCcCh-HHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHh-CCeEEEEEcccCC
Q 032110           79 PPYNVLITGSTKG-IGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF-GEQHVVQNVMLAK  141 (147)
Q Consensus        79 ~~k~~lVTG~s~G-IG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~~~dv~~  141 (147)
                      .|.+++=.|+++| +...+++.+... .+|+.++++++.++.+.+.+.+.. .....+.+.|+.+
T Consensus        85 pG~rVLEiG~GsG~lt~~la~~v~~~-g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~  148 (250)
T d1yb2a1          85 PGMDILEVGVGSGNMSSYILYALNGK-GTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD  148 (250)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHTTS-SEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT
T ss_pred             CcCEEEEeeeeCcHHHHHHHHHhCCC-cEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeec
Confidence            4667888886544 566777776554 499999999998888877776532 2345667777775

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=84.51  E-value=1.8  Score=25.89  Aligned_cols=35  Identities=23%  Similarity=0.318  Sum_probs=26.1

Q ss_pred             EEEeCCcChHHH-HHHHHHHHCCCEEEEEeCChHHHH
Q 032110           83 VLITGSTKGIGY-ALAKEFLKAGDNVIICSRSAERVD  118 (147)
Q Consensus        83 ~lVTG~s~GIG~-~~a~~La~~Ga~V~i~~r~~~~~~  118 (147)
                      +-+.| =+|+|. ++|+.|.++|+.|...|+.+....
T Consensus         4 ihfiG-IgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t   39 (89)
T d1j6ua1           4 IHFVG-IGGIGMSAVALHEFSNGNDVYGSNIEETERT   39 (89)
T ss_dssp             EEEET-TTSHHHHHHHHHHHHTTCEEEEECSSCCHHH
T ss_pred             EEEEe-ECHHHHHHHHHHHHhCCCeEEEEeCCCChhH
Confidence            44455 455555 679999999999999999875433

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=84.43  E-value=0.33  Score=30.00  Aligned_cols=37  Identities=16%  Similarity=0.179  Sum_probs=30.0

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      .+.||.++|.| +|--|..++..|++.+.++++..|..
T Consensus        29 ~f~gK~VlVVG-~g~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          29 LFVGESVLVVG-GASSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             GGTTCCEEEEC-SSHHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             hcCCCeEEEEC-CCCCHHHHHHHHHHhcCEEEEEEecC
Confidence            46899999998 55778899999999988877766654

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=83.98  E-value=0.48  Score=34.42  Aligned_cols=30  Identities=33%  Similarity=0.570  Sum_probs=26.1

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      ++|.| +|..|+..|..++++|++|+++.+.
T Consensus        22 VvVIG-aG~aGl~AA~~aa~~G~~V~vlEK~   51 (317)
T d1qo8a2          22 VLVVG-AGSAGFNASLAAKKAGANVILVDKA   51 (317)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCC
Confidence            66775 8888999999999999999998763

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=83.79  E-value=1.1  Score=31.91  Aligned_cols=33  Identities=30%  Similarity=0.388  Sum_probs=27.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHHC-CCEEEEE
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLKA-GDNVIIC  110 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~~-Ga~V~i~  110 (147)
                      .++||+++|.| .|..|..+++.|++. |++|+..
T Consensus        29 ~l~g~~v~IqG-fGnVG~~~a~~L~~~~G~kvv~v   62 (239)
T d1gtma1          29 TLKGKTIAIQG-YGNAGYYLAKIMSEDFGMKVVAV   62 (239)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCcceeec
Confidence            48899999998 678999999999864 8887654

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.60  E-value=0.55  Score=33.17  Aligned_cols=33  Identities=30%  Similarity=0.374  Sum_probs=27.8

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~  115 (147)
                      .++|.| +|=-|+.+|..|+++|.+|.++++.++
T Consensus         4 ~V~IvG-aGp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIG-AGPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            367777 457899999999999999999998764

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=83.59  E-value=2.8  Score=28.21  Aligned_cols=40  Identities=30%  Similarity=0.327  Sum_probs=34.1

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~  120 (147)
                      ...++|.| .|--|+..++.....|++|.++|.+.+.+++.
T Consensus        32 pa~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l   71 (168)
T d1pjca1          32 PGKVVILG-GGVVGTEAAKMAVGLGAQVQIFDINVERLSYL   71 (168)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CcEEEEEC-CChHHHHHHHHHhhCCCEEEEEeCcHHHHHHH
Confidence            34788887 67789999999999999999999999887654

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=83.49  E-value=0.67  Score=33.96  Aligned_cols=29  Identities=17%  Similarity=0.103  Sum_probs=25.0

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeC
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSR  112 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r  112 (147)
                      +||.| +|--|..+|.+|++.|.+|.++.+
T Consensus         5 VIVVG-sG~aG~v~A~rLaeaG~~VlvLEa   33 (367)
T d1n4wa1           5 AVVIG-TGYGAAVSALRLGEAGVQTLMLEM   33 (367)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEEES
T ss_pred             EEEeC-cCHHHHHHHHHHHHCcCeEEEEec
Confidence            56666 677799999999999999999987

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=83.43  E-value=3.4  Score=25.35  Aligned_cols=34  Identities=29%  Similarity=0.397  Sum_probs=25.6

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHH---CCCEEEEEeCCh
Q 032110           80 PYNVLITGSTKGIGYALAKEFLK---AGDNVIICSRSA  114 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~---~Ga~V~i~~r~~  114 (147)
                      .|.++|.| +|.+|.++|..|..   +|.+|.++.+.+
T Consensus        20 p~~v~ivG-gG~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVG-GGFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEEC-SSHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEEC-CcHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            35788887 59999999976554   556899988754

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=83.34  E-value=0.89  Score=30.73  Aligned_cols=37  Identities=16%  Similarity=0.252  Sum_probs=30.6

Q ss_pred             CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      ..++||.++|.| +|--|..+|..+++.+++++...|.
T Consensus        28 ~~~~gK~V~VvG-~G~Sa~dia~~~~~~~~~~~~~~~~   64 (235)
T d1w4xa2          28 VDFSGQRVGVIG-TGSSGIQVSPQIAKQAAELFVFQRT   64 (235)
T ss_dssp             CCCBTCEEEEEC-CSHHHHHHHHHHHHHBSEEEEEESS
T ss_pred             CCCCCCEEEEEC-CCccHHHHHHHHHhhhccccccccc
Confidence            357899999998 5556899999999999998877664

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=83.20  E-value=0.57  Score=33.97  Aligned_cols=32  Identities=22%  Similarity=0.371  Sum_probs=26.8

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~  114 (147)
                      -++|.| +|--|+.+|+.|++.|.+|.++.++.
T Consensus         3 dv~IIG-aG~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVG-SGLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEEC-CSHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             cEEEEC-CcHHHHHHHHHHHhCCCcEEEEECCC
Confidence            367776 77789999999999999999987654

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=82.52  E-value=2.9  Score=29.31  Aligned_cols=62  Identities=23%  Similarity=0.278  Sum_probs=47.1

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEE--eC-ChHHHHHHHHHHHHHhCCeEEEEEcccC
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIIC--SR-SAERVDSAVQSLREEFGEQHVVQNVMLA  140 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~--~r-~~~~~~~~~~~l~~~~~~~~~~~~~dv~  140 (147)
                      .|-.+++++-...-...++..+.+.|.++...  |. +++..+++++++.++++..++++++...
T Consensus        24 ~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~   88 (255)
T d1gega_          24 DGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGV   88 (255)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCC
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEecccc
Confidence            35577888877777778888888888765543  43 4567788889999999999999987654

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=82.50  E-value=1.1  Score=28.76  Aligned_cols=28  Identities=21%  Similarity=0.430  Sum_probs=25.0

Q ss_pred             EEEEeCCcChHHHHHHHHHHHCCCEEEE
Q 032110           82 NVLITGSTKGIGYALAKEFLKAGDNVII  109 (147)
Q Consensus        82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i  109 (147)
                      .+.|.|++|-+|+++++.+.+.|+.++.
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~   29 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVL   29 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEE
Confidence            4789999999999999999999988664

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=82.44  E-value=3.7  Score=25.04  Aligned_cols=34  Identities=26%  Similarity=0.293  Sum_probs=26.6

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHH---CCCEEEEEeCCh
Q 032110           80 PYNVLITGSTKGIGYALAKEFLK---AGDNVIICSRSA  114 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~---~Ga~V~i~~r~~  114 (147)
                      .|.++|.| +|-+|.++|..|..   .|.+|.++.+.+
T Consensus        18 p~~v~IiG-gG~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVG-GGYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEEC-SSHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEEC-CChHHHHHHHHhHhhcccccccceecccc
Confidence            35788887 78999999976654   488999988754

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.10  E-value=5.4  Score=27.49  Aligned_cols=48  Identities=27%  Similarity=0.242  Sum_probs=38.8

Q ss_pred             CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHH
Q 032110           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE  126 (147)
Q Consensus        79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~  126 (147)
                      +|..++-.|++.|.-.++.-.+.....+|+.++++++.++.+.+.+.+
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~  123 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRK  123 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccc
Confidence            466899999999987777777777778999999999888777666654

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.73  E-value=1.2  Score=31.62  Aligned_cols=34  Identities=21%  Similarity=0.176  Sum_probs=28.6

Q ss_pred             CCCCCEEEEeCCcChHHHHHHHHHHH-CCCEEEEEe
Q 032110           77 MLPPYNVLITGSTKGIGYALAKEFLK-AGDNVIICS  111 (147)
Q Consensus        77 ~~~~k~~lVTG~s~GIG~~~a~~La~-~Ga~V~i~~  111 (147)
                      ++++|+++|-| .|-.|..+++.|.+ .|++|+.++
T Consensus        28 ~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          28 DPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            57899999886 89999999999975 599987654

>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=81.70  E-value=0.63  Score=32.95  Aligned_cols=33  Identities=24%  Similarity=0.441  Sum_probs=26.7

Q ss_pred             CEEEEeCCcChHHHH-----HHHHHHHCCCEEEEEeCCh
Q 032110           81 YNVLITGSTKGIGYA-----LAKEFLKAGDNVIICSRSA  114 (147)
Q Consensus        81 k~~lVTG~s~GIG~~-----~a~~La~~Ga~V~i~~r~~  114 (147)
                      |.++++| -||.|+.     +|..|+++|.+|.++|-++
T Consensus         9 ~~i~~sG-KGGVGKTTvaa~lA~~lA~~G~rVLlvD~Dp   46 (296)
T d1ihua1           9 PYLFFTG-KGGVGKTSISCATAIRLAEQGKRVLLVSTDP   46 (296)
T ss_dssp             SEEEEEC-STTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             eEEEEEC-CCcChHHHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4677765 8888876     4688999999999998775

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=81.63  E-value=1.1  Score=29.64  Aligned_cols=41  Identities=24%  Similarity=0.318  Sum_probs=29.6

Q ss_pred             CCEEEEeCCcChHHHHHHHHHHHC--CCEEEEE--eCChHHHHHH
Q 032110           80 PYNVLITGSTKGIGYALAKEFLKA--GDNVIIC--SRSAERVDSA  120 (147)
Q Consensus        80 ~k~~lVTG~s~GIG~~~a~~La~~--Ga~V~i~--~r~~~~~~~~  120 (147)
                      .|.+.|-|+||.||..+..-+.+.  .++|+.+  .++.+.+.+.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q   46 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADA   46 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHH
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHH
Confidence            368999999999999999888765  4676654  3444444433

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=81.26  E-value=1  Score=32.51  Aligned_cols=29  Identities=34%  Similarity=0.531  Sum_probs=24.5

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeC
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSR  112 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r  112 (147)
                      ++|.| +|-=|..+|.+|++.|.+|+++.+
T Consensus         7 viIVG-sG~aG~v~A~~La~~G~kVlvLEa   35 (379)
T d2f5va1           7 VVIVG-SGPIGCTYARELVGAGYKVAMFDI   35 (379)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred             EEEEC-cCHHHHHHHHHHhhCCCeEEEEec
Confidence            67777 555599999999999999999875

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=80.77  E-value=0.89  Score=33.31  Aligned_cols=30  Identities=23%  Similarity=0.186  Sum_probs=25.4

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      +||.| +|--|..+|.+|++.|.+|.++.+-
T Consensus        10 vIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG   39 (370)
T d3coxa1          10 ALVIG-SGYGGAVAALRLTQAGIPTQIVEMG   39 (370)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            67777 5567899999999999999999863

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=80.48  E-value=0.85  Score=32.84  Aligned_cols=30  Identities=23%  Similarity=0.166  Sum_probs=25.6

Q ss_pred             EEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~  113 (147)
                      ++|.| +|.-|+..|..++++|++|+++...
T Consensus         8 VvVIG-~G~AGl~AAl~aa~~G~~V~liEK~   37 (336)
T d2bs2a2           8 SLVIG-GGLAGLRAAVATQQKGLSTIVLSLI   37 (336)
T ss_dssp             EEEEC-CSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEecC
Confidence            67776 7778999999999999999998653

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=80.47  E-value=5.3  Score=25.62  Aligned_cols=62  Identities=11%  Similarity=0.020  Sum_probs=44.1

Q ss_pred             CCCEEEEeCCc---ChHHHHHHHHHHHCCCEEEEEeC----------------------------ChHHHHHHHHHHHHH
Q 032110           79 PPYNVLITGST---KGIGYALAKEFLKAGDNVIICSR----------------------------SAERVDSAVQSLREE  127 (147)
Q Consensus        79 ~~k~~lVTG~s---~GIG~~~a~~La~~Ga~V~i~~r----------------------------~~~~~~~~~~~l~~~  127 (147)
                      +.|.+.|.|++   +..|+.+.+.|.+.|++|+.+..                            ..+...+.++++.+.
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i~vp~~~~~~~~~e~~~~   97 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFVKPKLTMEYVEQAIKK   97 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEECSCHHHHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEEEeCHHHHHHHHHHHHHh
Confidence            46789999988   67999999999999999886543                            344556677777665


Q ss_pred             hCCeEEEEEcccCC
Q 032110          128 FGEQHVVQNVMLAK  141 (147)
Q Consensus       128 ~~~~~~~~~~dv~~  141 (147)
                      ..+ .++++....+
T Consensus        98 g~k-~v~~~~G~~~  110 (139)
T d2d59a1          98 GAK-VVWFQYNTYN  110 (139)
T ss_dssp             TCS-EEEECTTCCC
T ss_pred             CCC-EEEEeccccC
Confidence            433 4555444433

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.12  E-value=4.4  Score=29.34  Aligned_cols=60  Identities=22%  Similarity=0.152  Sum_probs=37.3

Q ss_pred             CCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHHHh-CCeEEEEEcccCC
Q 032110           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEF-GEQHVVQNVMLAK  141 (147)
Q Consensus        78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~~~dv~~  141 (147)
                      .+||+++-.|++.|+   ++..+++.|+ +|+.++.++ .++.+.+...+.. .....+++.|+.+
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~   98 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLED   98 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTT
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhh
Confidence            468899999988774   3456677886 688888775 3333333333322 2335666766654

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=80.04  E-value=1.1  Score=32.45  Aligned_cols=34  Identities=26%  Similarity=0.375  Sum_probs=26.5

Q ss_pred             CEEEEeCCcChHHHHHHHHHHHCC--CEEEEEeCChH
Q 032110           81 YNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAE  115 (147)
Q Consensus        81 k~~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~~~  115 (147)
                      |.++|.| +|--|+.+|..|+++|  .+|++..++..
T Consensus         5 KrVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           5 RKIAIIG-AGPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            5677776 5666888899998877  58999988753