Citrus Sinensis ID: 032114

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------
Protein Sequence
MGCPDLTQIHHRMGNLYIWVLFVFFFFQSSCLGFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCKPQEGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIFFCKTDPLSKDNFELLKRRIDEMYQVFFFFRVRSS
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEEEEcccccccccccccccccccccccccccccccccccccEEccccEEEEccccccccccccccccHHHHHHHHHHHHHccHHEEEEEEccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHHHHHccccccEccccccccccccccEEEEEEEEcccccEccccEEEccccccccccccccHHHHHHHcccccccccEEEEEcccccEEEEEEcccccHHHHHHHHHHHHHccEEEEEEEEEcc
Coil and Loop (DISEMBL)
MGCPDLTQIHHRMGNLYIWVLFVFFFFQssclgfylrdnyphkhvvsdplsvkvnsitsidtkmpfsyyslsfckpqegvkdsAENRGellmgdrienspyrfktytnetdiffcktdplskDNFELLKRRIDEMYQVFFFFRVRSS
Flexible Loop (DISEMBL)
MGCPDLTQIHHRMGNLYIWVLFVFFFFQSSCLGFYLRDNYPHKhvvsdplsvkvNSITSIDTKMPFSYYSLSFCKPQEGVKDSAENRGEllmgdrienspyrFKTYTNetdiffcktdplSKDNFELLKRRIDEMYQVFFFFRVRSS
Low Complexity Region (SEG)
MGCPDLTQIHHRMGNLYIWVLFVFFFFQSSCLGFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCKPQEGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIFFCKTDPLSKDNFELLKRRIDEMYQVFFFFRVRSS
Disordered region (IsUnstruct)
*****LTQIHHRMGNLYIWVLFVFFFFQSSCLGFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCK***************LMGDRIENSPYRFKTYTNETDIFFCKTDPLSKDNFELLKRRIDEMYQVFFFFRV***
Disordered Region (DISOPRED)
********IHHRMGNLYIWVLFVFFFFQSSCLGFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCK*************ELLMGDRIENSPYRFKTYTNETDIFFCKTDPLSKDNFELLKRRIDEMYQVFFFFRVRS*
Disordered Region (DISEMBL)
MGCPDLTQIHHRMGNLYIWVLFVFFFFQSSCLGFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCKPQEGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIFFCKTDPLSKDNFELLKRRIDEMYQVFFFFRVRSS
Disordered Region (DISPRO)
MGCPDLTQIHHRMGNLYIWVLFVFFFFQSSCLGFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCKPQEGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIFFCKTDPLSKDNFELLKRRIDEMYQVFFFFRVRS*
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGCPDLTQIHHRMGNLYIWVLFVFFFFQSSCLGFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCKPQEGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIFFCKTDPLSKDNFELLKRRIDEMYQVFFFFRVRSS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	147	2.2.26 [Sep-21-2011]
Q55FP0	641	Putative phagocytic recep	yes	no	0.714	0.163	0.390	5e-16
Q4KLL4	643	Transmembrane 9 superfami	yes	no	0.850	0.194	0.325	5e-11
Q8BH24	643	Transmembrane 9 superfami	yes	no	0.850	0.194	0.325	6e-11
A5D7E2	642	Transmembrane 9 superfami	yes	no	0.809	0.185	0.325	6e-11
Q92544	642	Transmembrane 9 superfami	yes	no	0.809	0.185	0.325	6e-11
Q5RDY2	642	Transmembrane 9 superfami	yes	no	0.809	0.185	0.325	7e-11
Q99805	663	Transmembrane 9 superfami	no	no	0.564	0.125	0.348	1e-07
Q5R8Y6	663	Transmembrane 9 superfami	no	no	0.564	0.125	0.348	1e-07
Q66HG5	663	Transmembrane 9 superfami	no	no	0.564	0.125	0.337	3e-07
P58021	662	Transmembrane 9 superfami	no	no	0.564	0.125	0.337	3e-07

>sp|Q55FP0|PHG1A_DICDI Putative phagocytic receptor 1a OS=Dictyostelium discoideum GN=phg1a PE=2 SV=1

 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 64/110 (58%), Gaps = 5/110 (4%)

Query: 34  FYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSL-SFCKPQEGVKDSAENRGELLM 92
           FYL    PH     +  ++KVN ITS+ T++P+ YY L   C+P+EG+ D  EN GE+L+
Sbjct: 25  FYLPGMIPHDFAQGEEGAIKVNKITSVHTQIPYKYYQLPGVCQPKEGIIDDTENLGEILL 84

Query: 93  GDRIENSPYRFKTYTNETDIFFCKTDPLS----KDNFELLKRRIDEMYQV 138
           GDRIENS Y F   T+        ++  S    K++ ++L+ RI   Y+V
Sbjct: 85  GDRIENSDYTFNFLTDGGKCKVINSESCSPIIKKEDLKVLEDRIQNQYRV 134

Involved in adhesion, phagocytosis of hydrophilic particles and intracellular killing of bacteria.
Dictyostelium discoideum (taxid: 44689)

>sp|Q4KLL4|TM9S4_RAT Transmembrane 9 superfamily member 4 OS=Rattus norvegicus GN=Tm9sf4 PE=2 SV=1

 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 7/132 (5%)

Query: 13  MGNLYIWVLFVFFFFQSSCLG--FYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYS 70
           M    IW          +C G  FY+    P     +DP+ +K   +TS  T++P+ YYS
Sbjct: 1   MAAAMIWWPRFLLLLCLTCKGSTFYVPGVAPINFHQNDPVEIKAVKLTSSRTQLPYEYYS 60

Query: 71  LSFCKPQEGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIFFC----KTDPLSKDNFE 126
           L FC+P + +   AEN GE+L GDRI N+P++    + +     C    K   L+ +   
Sbjct: 61  LPFCQPNK-ITYKAENLGEVLRGDRIVNTPFQVLMNSEKKCEVLCGQSNKPVILTVEQSR 119

Query: 127 LLKRRIDEMYQV 138
           L+  RI E Y V
Sbjct: 120 LVAERITEEYYV 131

Rattus norvegicus (taxid: 10116)

>sp|Q8BH24|TM9S4_MOUSE Transmembrane 9 superfamily member 4 OS=Mus musculus GN=Tm9sf4 PE=2 SV=1

 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 7/132 (5%)

Query: 13  MGNLYIWVLFVFFFFQSSCLG--FYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYS 70
           M    IW          +C G  FY+    P     +DP+ +K   +TS  T++P+ YYS
Sbjct: 1   MAAAMIWWPRFLLLLCLTCKGSTFYVPGVAPINFHQNDPVEIKAVKLTSSRTQLPYEYYS 60

Query: 71  LSFCKPQEGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIFFC----KTDPLSKDNFE 126
           L FC+P + +   AEN GE+L GDRI N+P++    + +     C    K   L+ +   
Sbjct: 61  LPFCQPIK-ITYKAENLGEVLRGDRIVNTPFQVLMNSEKKCEVLCNQSNKPITLTVEQSR 119

Query: 127 LLKRRIDEMYQV 138
           L+  RI E Y V
Sbjct: 120 LVAERITEEYYV 131

Mus musculus (taxid: 10090)

>sp|A5D7E2|TM9S4_BOVIN Transmembrane 9 superfamily member 4 OS=Bos taurus GN=TM9SF4 PE=2 SV=2

 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 7/126 (5%)

Query: 19  WVLFVFFFFQSSC--LGFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCKP 76
           W+ +    F   C    FY+    P     +DP+ +K   +TS  T++P+ YYSL FC+P
Sbjct: 7   WLPWSLLLFSLMCDTGAFYVPGVAPINFHQNDPVEIKAVKLTSSRTQLPYEYYSLPFCQP 66

Query: 77  QEGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIFFC----KTDPLSKDNFELLKRRI 132
            + +   AEN GE+L GDRI N+P++    + +     C    K   L+ +   L+  RI
Sbjct: 67  SK-ITYKAENLGEVLRGDRIVNTPFQVLMNSEKKCEVLCGQSNKPVTLTVEQSRLVAERI 125

Query: 133 DEMYQV 138
            E Y V
Sbjct: 126 SEDYYV 131

Bos taurus (taxid: 9913)

>sp|Q92544|TM9S4_HUMAN Transmembrane 9 superfamily member 4 OS=Homo sapiens GN=TM9SF4 PE=1 SV=2

 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 7/126 (5%)

Query: 19  WVLFVFFFFQSSC--LGFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCKP 76
           W+ +    F   C    FY+    P     +DP+ +K   +TS  T++P+ YYSL FC+P
Sbjct: 7   WLPWSLLLFSLMCETSAFYVPGVAPINFHQNDPVEIKAVKLTSSRTQLPYEYYSLPFCQP 66

Query: 77  QEGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIFFC----KTDPLSKDNFELLKRRI 132
            + +   AEN GE+L GDRI N+P++    + +     C    K   L+ +   L+  RI
Sbjct: 67  SK-ITYKAENLGEVLRGDRIVNTPFQVLMNSEKKCEVLCSQSNKPVTLTVEQSRLVAERI 125

Query: 133 DEMYQV 138
            E Y V
Sbjct: 126 TEDYYV 131

Homo sapiens (taxid: 9606)

>sp|Q5RDY2|TM9S4_PONAB Transmembrane 9 superfamily member 4 OS=Pongo abelii GN=TM9SF4 PE=2 SV=1

 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 7/126 (5%)

Query: 19  WVLFVFFFFQSSC--LGFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCKP 76
           W+ +    F   C    FY+    P     +DP+ +K   +TS  T++P+ YYSL FC+P
Sbjct: 7   WLPWSLLLFSLICETSAFYVPGVAPINFHQNDPVEIKAVKLTSSRTQLPYEYYSLPFCQP 66

Query: 77  QEGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIFFC----KTDPLSKDNFELLKRRI 132
            + +   AEN GE+L GDRI N+P++    + +     C    K   L+ +   L+  RI
Sbjct: 67  SK-ITYKAENLGEVLRGDRIVNTPFQVLMNSEKKCEVLCSQSNKPVTLTVEQSRLVAERI 125

Query: 133 DEMYQV 138
            E Y V
Sbjct: 126 TEDYYV 131

Pongo abelii (taxid: 9601)

>sp|Q99805|TM9S2_HUMAN Transmembrane 9 superfamily member 2 OS=Homo sapiens GN=TM9SF2 PE=1 SV=1

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 6/89 (6%)

Query: 54  VNSITSIDTKMPFSYYSLSFCKPQEGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIF 113
           VN + S+++ +P+ Y +  FC+  EG K  +EN G++L G+RIE SPY+F     ET   
Sbjct: 64  VNRLDSVESVLPYEYTAFDFCQASEG-KRPSENLGQVLFGERIEPSPYKFTFNKKETCKL 122

Query: 114 FCKT-----DPLSKDNFELLKRRIDEMYQ 137
            C           K   E LK+ +   YQ
Sbjct: 123 VCTKTYHTEKAEDKQKLEFLKKSMLLNYQ 151

In the intracellular compartments, may function as a channel or small molecule transporter.

Homo sapiens (taxid: 9606)

>sp|Q5R8Y6|TM9S2_PONAB Transmembrane 9 superfamily member 2 OS=Pongo abelii GN=TM9SF2 PE=2 SV=1

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 6/89 (6%)

Query: 54  VNSITSIDTKMPFSYYSLSFCKPQEGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIF 113
           VN + S+++ +P+ Y +  FC+  EG K  +EN G++L G+RIE SPY+F     ET   
Sbjct: 64  VNRLDSVESVLPYEYTAFDFCQASEG-KRPSENLGQVLFGERIEPSPYKFTFNKEETCKL 122

Query: 114 FCKT-----DPLSKDNFELLKRRIDEMYQ 137
            C           K   E LK+ +   YQ
Sbjct: 123 VCTKTYHTEKAEDKQKLEFLKKSMLLNYQ 151

In the intracellular compartments, may function as a channel or small molecule transporter.

Pongo abelii (taxid: 9601)

>sp|Q66HG5|TM9S2_RAT Transmembrane 9 superfamily member 2 OS=Rattus norvegicus GN=Tm9sf2 PE=2 SV=1

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 6/89 (6%)

Query: 54  VNSITSIDTKMPFSYYSLSFCKPQEGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIF 113
           VN + S+++ +P+ Y +  FC+  EG K  +EN G++L G+RIE SPY+F     ET   
Sbjct: 64  VNRLDSVESVLPYEYTAFDFCQASEG-KRPSENLGQVLFGERIEPSPYKFTFNKEETCKL 122

Query: 114 FCKT-----DPLSKDNFELLKRRIDEMYQ 137
            C           K   + LK+ +   YQ
Sbjct: 123 VCTKTYHTEKAEDKQKLDFLKKSMLLNYQ 151

In the intracellular compartments, may function as a channel or small molecule transporter.

Rattus norvegicus (taxid: 10116)

>sp|P58021|TM9S2_MOUSE Transmembrane 9 superfamily member 2 OS=Mus musculus GN=Tm9sf2 PE=2 SV=1

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 6/89 (6%)

Query: 54  VNSITSIDTKMPFSYYSLSFCKPQEGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIF 113
           VN + S+++ +P+ Y +  FC+  EG K  +EN G++L G+RIE SPY+F     ET   
Sbjct: 63  VNRLDSVESVLPYEYTAFDFCQASEG-KRPSENLGQVLFGERIEPSPYKFTFNKKETCKL 121

Query: 114 FCKT-----DPLSKDNFELLKRRIDEMYQ 137
            C           K   + LK+ +   YQ
Sbjct: 122 VCTKTYNTEKAEDKQKLDFLKKSMLLNYQ 150

In the intracellular compartments, may function as a channel or small molecule transporter.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
147804721	656	hypothetical protein VITISV_031212 [Viti	0.816	0.182	0.752	2e-47
225463008	656	PREDICTED: transmembrane 9 superfamily m	0.816	0.182	0.752	2e-47
255565099	657	Endosomal P24A protein precursor, putati	0.816	0.182	0.743	2e-47
296084581	545	unnamed protein product [Vitis vinifera]	0.816	0.220	0.752	3e-47
224144028	194	predicted protein [Populus trichocarpa]	0.816	0.618	0.752	7e-46
334188011	658	endomembrane family protein 70 [Arabidop	0.816	0.182	0.694	3e-43
449493667	662	PREDICTED: transmembrane 9 superfamily m	0.816	0.181	0.694	3e-43
449443263	471	PREDICTED: transmembrane 9 superfamily m	0.816	0.254	0.694	6e-43
449457933	657	PREDICTED: transmembrane 9 superfamily m	0.843	0.188	0.704	6e-43
413939326	661	transmembrane 9 family protein member 2	0.721	0.160	0.745	2e-42

>gi|147804721|emb|CAN62778.1| hypothetical protein VITISV_031212 [Vitis vinifera]

 Score =  193 bits (490), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 91/121 (75%), Positives = 102/121 (84%), Gaps = 1/121 (0%)

Query: 18  IWVLFVFFFFQSSCLGFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCKPQ 77
           IWVLF    FQ  C GFYL  +YPHK+ + + LSVKVNS+TSIDT+MPFSYYSL FCKP 
Sbjct: 9   IWVLFTCLVFQCGC-GFYLPGSYPHKYDIGNTLSVKVNSLTSIDTEMPFSYYSLPFCKPP 67

Query: 78  EGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIFFCKTDPLSKDNFELLKRRIDEMYQ 137
           EGVKDSAEN GELLMGDRIENSPYRFK YTNET IF CK+DPLS D+F++LK+RIDEMYQ
Sbjct: 68  EGVKDSAENLGELLMGDRIENSPYRFKMYTNETQIFLCKSDPLSADDFKILKKRIDEMYQ 127

Query: 138 V 138
           V
Sbjct: 128 V 128

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225463008|ref|XP_002264906.1| PREDICTED: transmembrane 9 superfamily member 4 [Vitis vinifera]

 Score =  193 bits (490), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 91/121 (75%), Positives = 102/121 (84%), Gaps = 1/121 (0%)

Query: 18  IWVLFVFFFFQSSCLGFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCKPQ 77
           IWVLF    FQ  C GFYL  +YPHK+ + + LSVKVNS+TSIDT+MPFSYYSL FCKP 
Sbjct: 9   IWVLFTCLVFQCGC-GFYLPGSYPHKYDIGNTLSVKVNSLTSIDTEMPFSYYSLPFCKPP 67

Query: 78  EGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIFFCKTDPLSKDNFELLKRRIDEMYQ 137
           EGVKDSAEN GELLMGDRIENSPYRFK YTNET IF CK+DPLS D+F++LK+RIDEMYQ
Sbjct: 68  EGVKDSAENLGELLMGDRIENSPYRFKMYTNETQIFLCKSDPLSADDFKILKKRIDEMYQ 127

Query: 138 V 138
           V
Sbjct: 128 V 128

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255565099|ref|XP_002523542.1| Endosomal P24A protein precursor, putative [Ricinus communis] gi|223537249|gb|EEF38881.1| Endosomal P24A protein precursor, putative [Ricinus communis]

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 90/121 (74%), Positives = 103/121 (85%), Gaps = 1/121 (0%)

Query: 18  IWVLFVFFFFQSSCLGFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCKPQ 77
           IWVL +F  FQS   GFYL  +YPHK+ V + LSVKVNSITSIDT+MPFSYYSL FCKP 
Sbjct: 9   IWVLTIFLIFQSG-YGFYLPGSYPHKYNVGETLSVKVNSITSIDTEMPFSYYSLPFCKPA 67

Query: 78  EGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIFFCKTDPLSKDNFELLKRRIDEMYQ 137
           EGVKDSAEN GELLMGDRIENSPYRF+ + NE+++F CKTDPLS D+F+LLK+RIDEMYQ
Sbjct: 68  EGVKDSAENLGELLMGDRIENSPYRFRMHVNESEVFLCKTDPLSADSFKLLKKRIDEMYQ 127

Query: 138 V 138
           V
Sbjct: 128 V 128

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296084581|emb|CBI25602.3| unnamed protein product [Vitis vinifera]

 Score =  192 bits (489), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 91/121 (75%), Positives = 102/121 (84%), Gaps = 1/121 (0%)

Query: 18  IWVLFVFFFFQSSCLGFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCKPQ 77
           IWVLF    FQ  C GFYL  +YPHK+ + + LSVKVNS+TSIDT+MPFSYYSL FCKP 
Sbjct: 9   IWVLFTCLVFQCGC-GFYLPGSYPHKYDIGNTLSVKVNSLTSIDTEMPFSYYSLPFCKPP 67

Query: 78  EGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIFFCKTDPLSKDNFELLKRRIDEMYQ 137
           EGVKDSAEN GELLMGDRIENSPYRFK YTNET IF CK+DPLS D+F++LK+RIDEMYQ
Sbjct: 68  EGVKDSAENLGELLMGDRIENSPYRFKMYTNETQIFLCKSDPLSADDFKILKKRIDEMYQ 127

Query: 138 V 138
           V
Sbjct: 128 V 128

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224144028|ref|XP_002325161.1| predicted protein [Populus trichocarpa] gi|222866595|gb|EEF03726.1| predicted protein [Populus trichocarpa]

 Score =  188 bits (477), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 91/121 (75%), Positives = 103/121 (85%), Gaps = 1/121 (0%)

Query: 18  IWVLFVFFFFQSSCLGFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCKPQ 77
           IWVL +   FQS   GFYL  +YPHKH + D LSVKVNSITSI+T+MPFSYYSL FCKP 
Sbjct: 9   IWVLTLCMVFQSGH-GFYLPGSYPHKHGIGDTLSVKVNSITSIETEMPFSYYSLPFCKPL 67

Query: 78  EGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIFFCKTDPLSKDNFELLKRRIDEMYQ 137
           EGVKDSAEN GE+LMGDRIENSPY+FK YTNE+DIF C+TDPLS +NF+LLK+RIDEMYQ
Sbjct: 68  EGVKDSAENLGEVLMGDRIENSPYKFKMYTNESDIFQCQTDPLSGENFKLLKKRIDEMYQ 127

Query: 138 V 138
           V
Sbjct: 128 V 128

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334188011|ref|NP_001190420.1| endomembrane family protein 70 [Arabidopsis thaliana] gi|10176814|dbj|BAB10022.1| endosomal protein-like [Arabidopsis thaliana] gi|332006552|gb|AED93935.1| endomembrane family protein 70 [Arabidopsis thaliana]

 Score =  179 bits (455), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 84/121 (69%), Positives = 100/121 (82%), Gaps = 1/121 (0%)

Query: 18  IWVLFVFFFFQSSCLGFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCKPQ 77
           IWVL +    QSS  GFYL  +YPHK+ V D L+VKVNS+TSI+T+MPFSYYSL FCKP 
Sbjct: 9   IWVLAILLVIQSS-FGFYLPGSYPHKYEVGDYLNVKVNSLTSIETEMPFSYYSLPFCKPS 67

Query: 78  EGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIFFCKTDPLSKDNFELLKRRIDEMYQ 137
           EG+KDSAEN GELLMGDRIENSPYRF+ + NE++IF C+TD LS D+ +LLK+RIDEMYQ
Sbjct: 68  EGIKDSAENLGELLMGDRIENSPYRFRMFKNESEIFLCQTDKLSADSLKLLKKRIDEMYQ 127

Query: 138 V 138
           V
Sbjct: 128 V 128

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449493667|ref|XP_004159402.1| PREDICTED: transmembrane 9 superfamily member 4-like [Cucumis sativus]

 Score =  179 bits (455), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 84/121 (69%), Positives = 98/121 (80%), Gaps = 1/121 (0%)

Query: 18  IWVLFVFFFFQSSCLGFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCKPQ 77
           IWVL     FQ    GFYL  +YPHK+VV D LSVKVNS+TSI+T++PF YYSL FCKP 
Sbjct: 14  IWVLTCSLIFQLG-YGFYLPGSYPHKYVVGDLLSVKVNSLTSIETELPFGYYSLPFCKPS 72

Query: 78  EGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIFFCKTDPLSKDNFELLKRRIDEMYQ 137
           EGVKDSAEN GELLMGDRIENSPY+FK +TN+TDIF C +DPL+ D F+++K RIDEMYQ
Sbjct: 73  EGVKDSAENLGELLMGDRIENSPYQFKMFTNQTDIFMCSSDPLTSDQFKIMKERIDEMYQ 132

Query: 138 V 138
           V
Sbjct: 133 V 133

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443263|ref|XP_004139399.1| PREDICTED: transmembrane 9 superfamily member 4-like [Cucumis sativus]

 Score =  178 bits (452), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 84/121 (69%), Positives = 98/121 (80%), Gaps = 1/121 (0%)

Query: 18  IWVLFVFFFFQSSCLGFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCKPQ 77
           IWVL     FQ    GFYL  +YPHK+VV D LSVKVNS+TSI+T++PF YYSL FCKP 
Sbjct: 14  IWVLTCSLIFQLG-YGFYLPGSYPHKYVVGDLLSVKVNSLTSIETELPFGYYSLPFCKPS 72

Query: 78  EGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIFFCKTDPLSKDNFELLKRRIDEMYQ 137
           EGVKDSAEN GELLMGDRIENSPY+FK +TN+TDIF C +DPL+ D F+++K RIDEMYQ
Sbjct: 73  EGVKDSAENLGELLMGDRIENSPYQFKMFTNQTDIFMCSSDPLTSDQFKIMKERIDEMYQ 132

Query: 138 V 138
           V
Sbjct: 133 V 133

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457933|ref|XP_004146702.1| PREDICTED: transmembrane 9 superfamily member 4-like [Cucumis sativus] gi|449505381|ref|XP_004162451.1| PREDICTED: transmembrane 9 superfamily member 4-like [Cucumis sativus]

 Score =  178 bits (452), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 88/125 (70%), Positives = 96/125 (76%), Gaps = 1/125 (0%)

Query: 14  GNLYIWVLFVFFFFQSSCLGFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSF 73
           G   IWVL +   FQS   GFYL  +YP KHVV D LSVKVNSITSIDT+MPFSYYSL F
Sbjct: 5   GGFRIWVLSLCLIFQSG-YGFYLPGSYPLKHVVGDDLSVKVNSITSIDTEMPFSYYSLPF 63

Query: 74  CKPQEGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIFFCKTDPLSKDNFELLKRRID 133
           C P  GVKDSAEN GELLMGDRIENSPY FK Y N+TD+F C+TDPL+ D  + LK RID
Sbjct: 64  CTPPGGVKDSAENLGELLMGDRIENSPYLFKMYKNQTDVFLCQTDPLTDDQLKNLKERID 123

Query: 134 EMYQV 138
           EMYQV
Sbjct: 124 EMYQV 128

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413939326|gb|AFW73877.1| transmembrane 9 family protein member 2 [Zea mays]

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 79/106 (74%), Positives = 92/106 (86%)

Query: 33  GFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCKPQEGVKDSAENRGELLM 92
           GFYL  +YPHK+ V D L+VKVNS+TSIDT+MPFSYYSL FC+PQ+GVKDSAEN GELLM
Sbjct: 26  GFYLPGSYPHKYNVGDDLNVKVNSLTSIDTEMPFSYYSLPFCEPQDGVKDSAENLGELLM 85

Query: 93  GDRIENSPYRFKTYTNETDIFFCKTDPLSKDNFELLKRRIDEMYQV 138
           GDRIENSPYRF+ YTNE+D+F C++ PL  D F LLK+RIDEMYQV
Sbjct: 86  GDRIENSPYRFRMYTNESDVFLCRSPPLGADAFSLLKKRIDEMYQV 131

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
TAIR|locus:2135620	652	AT4G12650 [Arabidopsis thalian	0.816	0.184	0.524	2.3e-29
TAIR|locus:2047565	637	AT2G24170 [Arabidopsis thalian	0.823	0.189	0.422	4.2e-19
TAIR|locus:2183710	648	EMP1 "endomembrane protein 1"	0.795	0.180	0.403	3.8e-17
TAIR|locus:2091561	641	TMN7 "transmembrane nine 7" [A	0.802	0.184	0.388	8.7e-17
DICTYBASE|DDB_G0267444	641	phg1A "TM9 protein A" [Dictyos	0.809	0.185	0.380	2.7e-16
WB|WBGene00014119	656	ZK858.6 [Caenorhabditis elegan	0.700	0.157	0.419	2e-15
TAIR|locus:2205682	637	TMN6 "transmembrane nine 6" [A	0.768	0.177	0.378	2.7e-15
UNIPROTKB|F1PWE3	642	TM9SF4 "Uncharacterized protei	0.809	0.185	0.333	2.6e-12
ZFIN|ZDB-GENE-040426-1575	651	tm9sf4 "transmembrane 9 superf	0.877	0.198	0.330	5.5e-12
UNIPROTKB|A5D7E2	642	TM9SF4 "Transmembrane 9 superf	0.809	0.185	0.333	2.4e-11

TAIR|locus:2135620 AT4G12650 [Arabidopsis thaliana (taxid:3702)]

 Score = 333 (122.3 bits), Expect = 2.3e-29, P = 2.3e-29
 Identities = 64/122 (52%), Positives = 88/122 (72%)

Query:    18 IWVLFVFFFFQSS-CLGFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCKP 76
             ++ +FV   F S  C GFYL  +Y H +   D +  KVNS+TSI+T++PFSYYSL +C+P
Sbjct:     4 VYRVFVLLVFVSQLCNGFYLPGSYMHTYSDGDSIFAKVNSLTSIETELPFSYYSLPYCQP 63

Query:    77 QEGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIFFCKTDPLSKDNFELLKRRIDEMY 136
              EG+K SAEN GELLMGD+I+NS YRF+  TNE+ ++ C T PL++   +LLK+R  E+Y
Sbjct:    64 LEGIKKSAENLGELLMGDQIDNSAYRFRMRTNES-LYLCTTSPLNEHEVKLLKQRTRELY 122

Query:   137 QV 138
             QV
Sbjct:   123 QV 124

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0005773 "vacuole" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2047565 AT2G24170 [Arabidopsis thaliana (taxid:3702)]

 Score = 238 (88.8 bits), Expect = 4.2e-19, P = 4.2e-19
 Identities = 52/123 (42%), Positives = 72/123 (58%)

Query:    16 LYIWVLFVFFFFQSSCLGFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCK 75
             + I+ L +FF       GFYL    P    + D L VKVN +TS  T++P+SYYSL +C+
Sbjct:     6 ILIFTLVLFFSLNVHIHGFYLPGVAPQDFQMGDALMVKVNKLTSTKTQLPYSYYSLPYCR 65

Query:    76 PQEGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIFFCKTDPLSKDNFELLKRRIDEM 135
             P E + DSAEN GE+L GDRIENSP+ FK   ++     C+   L K   +  K +I + 
Sbjct:    66 P-EHIVDSAENLGEVLRGDRIENSPFVFKMRESQMCAAVCRVK-LDKKTAKAFKEKIADE 123

Query:   136 YQV 138
             Y+V
Sbjct:   124 YRV 126

GO:0005576 "extracellular region" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006499 "N-terminal protein myristoylation" evidence=RCA

TAIR|locus:2183710 EMP1 "endomembrane protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 220 (82.5 bits), Expect = 3.8e-17, P = 3.8e-17
 Identities = 48/119 (40%), Positives = 65/119 (54%)

Query:    20 VLFVFFFFQSSCLGFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCKPQEG 79
             +  +F  F      FYL    P      D L VKVN +TSI T++P+SYYSL FC+P + 
Sbjct:    20 IALIFLLFIHGAHSFYLPGVAPQDFEKGDELKVKVNKLTSIKTQLPYSYYSLPFCRPSK- 78

Query:    80 VKDSAENRGELLMGDRIENSPYRFKTYTNETDIFFCKTDPLSKDNFELLKRRIDEMYQV 138
             + DS EN GE+L GDRIEN+PY FK    +      +   L     +  K +ID+ Y+V
Sbjct:    79 IVDSTENLGEVLRGDRIENAPYSFKMREAQMCNILGRVT-LDAKTAKAFKEKIDDEYRV 136

GO:0005739 "mitochondrion" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0006499 "N-terminal protein myristoylation" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2091561 TMN7 "transmembrane nine 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 207 (77.9 bits), Expect = 8.7e-17, Sum P(2) = 8.7e-17
 Identities = 47/121 (38%), Positives = 70/121 (57%)

Query:    17 YIWVLFVFFFFQSSCLGFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCKP 76
             Y  +L  F  F  S   FYL    P      DPL VKVN ++S  T++P+ YY L++CKP
Sbjct:    12 YATLLLSFLSFSLS-RAFYLPGVAPRDFQKGDPLYVKVNKLSSTKTQLPYDYYYLNYCKP 70

Query:    77 QEGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIFFCKTDPLSKDNFELLKRRIDEMY 136
              + + ++AEN GE+L GDRIENS Y F+   ++     C+   L+ D+ +  K +ID+ Y
Sbjct:    71 PK-ILNNAENLGEVLRGDRIENSVYTFQMLEDQPCKVGCRVK-LNADSTKNFKEKIDDEY 128

Query:   137 Q 137
             +
Sbjct:   129 R 129

GO:0005576 "extracellular region" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0006878 "cellular copper ion homeostasis" evidence=IDA

GO:0006882 "cellular zinc ion homeostasis" evidence=IDA

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

DICTYBASE|DDB_G0267444 phg1A "TM9 protein A" [Dictyostelium discoideum (taxid:44689)]

 Score = 212 (79.7 bits), Expect = 2.7e-16, P = 2.7e-16
 Identities = 48/126 (38%), Positives = 74/126 (58%)

Query:    20 VLFVFF-FFQSSCLG-FYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSL-SFCKP 76
             V F+ F  F +   G FYL    PH     +  ++KVN ITS+ T++P+ YY L   C+P
Sbjct:     9 VFFILFSIFLNHVNGIFYLPGMIPHDFAQGEEGAIKVNKITSVHTQIPYKYYQLPGVCQP 68

Query:    77 QEGVKDSAENRGELLMGDRIENSPYRFKTYTN--ETDIFFCKT-DPL-SKDNFELLKRRI 132
             +EG+ D  EN GE+L+GDRIENS Y F   T+  +  +   ++  P+  K++ ++L+ RI
Sbjct:    69 KEGIIDDTENLGEILLGDRIENSDYTFNFLTDGGKCKVINSESCSPIIKKEDLKVLEDRI 128

Query:   133 DEMYQV 138
                Y+V
Sbjct:   129 QNQYRV 134

GO:0033299 "secretion of lysosomal enzymes" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IMP

GO:0031589 "cell-substrate adhesion" evidence=IGI;IMP

GO:0030587 "sorocarp development" evidence=IMP

GO:0008283 "cell proliferation" evidence=IMP

GO:0006909 "phagocytosis" evidence=IMP

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0004888 "transmembrane signaling receptor activity" evidence=TAS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0050821 "protein stabilization" evidence=IMP

GO:0034394 "protein localization to cell surface" evidence=IMP

GO:0010467 "gene expression" evidence=IMP

GO:0044351 "macropinocytosis" evidence=RCA

WB|WBGene00014119 ZK858.6 [Caenorhabditis elegans (taxid:6239)]

 Score = 204 (76.9 bits), Expect = 2.0e-15, P = 2.0e-15
 Identities = 44/105 (41%), Positives = 60/105 (57%)

Query:    33 GFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCKPQEG-VKDSAENRGELL 91
             GFY+    P      D + VK   +TS +  MPF YYS+ FCKP  G ++  +EN GE++
Sbjct:    58 GFYVPGVAPVDFKAGDVIDVKAIKLTSSNNIMPFEYYSVPFCKPANGDIQYKSENLGEVM 117

Query:    92 MGDRIENSPYRFKTYTNETDIFFCKTDPLSKDNFELLKRRIDEMY 136
              GDRI N+PY F    NE  +  C ++ LSK+N  L K RI + Y
Sbjct:   118 RGDRIVNTPYAFHMKKNEQCVSVC-SNKLSKENVALFKERIRQEY 161

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2205682 TMN6 "transmembrane nine 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 192 (72.6 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
 Identities = 45/119 (37%), Positives = 67/119 (56%)

Query:    21 LFVFFFFQSSCLGFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCKPQEGV 80
             L + F F S+   FYL    P      DPL VKVN ++S  T++P+ +Y L++CKP + +
Sbjct:    11 LLLSFLFFSTLHAFYLPGVAPRDFQKGDPLYVKVNKLSSTKTQLPYDFYYLNYCKPPK-I 69

Query:    81 KDSAENRGELLMGDRIENSPYRFKTYTNETDIFFCKT--DPLSKDNFELLKRRIDEMYQ 137
              ++ EN GE+L GDRIENS Y F+   ++     C+   D  S  NF   + +ID  Y+
Sbjct:    70 LNTGENLGEVLRGDRIENSVYTFEMLEDQPCRVGCRVRVDAESAKNF---REKIDYEYR 125

GO:0005576 "extracellular region" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0007020 "microtubule nucleation" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

UNIPROTKB|F1PWE3 TM9SF4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 175 (66.7 bits), Expect = 2.6e-12, P = 2.6e-12
 Identities = 42/126 (33%), Positives = 68/126 (53%)

Query:    19 WVLFVFFFFQSSC--LGFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCKP 76
             W+L+    F  +C    FY+    P     +DP+ +K   +TS  T++P+ YYSL FC+P
Sbjct:     7 WLLWSLLLFSLTCDTRAFYVPGVAPINFHQNDPVEIKAVKLTSSRTQLPYEYYSLPFCQP 66

Query:    77 QEGVKDSAENRGELLMGDRIENSPYR-FKTYTNETDIFFCKTD-P--LSKDNFELLKRRI 132
              + +   AEN GE+L GDRI N+P++       + ++   +T+ P  L+ +   L+  RI
Sbjct:    67 SK-ITYKAENLGEVLRGDRIVNTPFQVLMNSEKKCEVLCSQTNKPVTLTVEQSRLVAERI 125

Query:   133 DEMYQV 138
              E Y V
Sbjct:   126 TEDYYV 131

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-040426-1575 tm9sf4 "transmembrane 9 superfamily protein member 4" [Danio rerio (taxid:7955)]

 Score = 172 (65.6 bits), Expect = 5.5e-12, P = 5.5e-12
 Identities = 46/139 (33%), Positives = 70/139 (50%)

Query:     6 LTQIHHRMGNLYIWVLFVFFFFQSSCLG-FYLRDNYPHKHVVSDPLSVKVNSITSIDTKM 64
             +T++      + +W L +       C+  FY+    P     + P+ +K   +TS  T++
Sbjct:     1 MTRVFKMAAAMEMWALLLVSTLP--CVAPFYVPGVAPMNFHQNSPVEIKAVKLTSSRTQL 58

Query:    65 PFSYYSLSFCKPQEGVKDSAENRGELLMGDRIENSPYR-FKTYTNETDIFFCKT--DP-- 119
             P+ YYSL FCKP E +   AEN GE+L GDRI N+ Y  F     + ++  CK    P  
Sbjct:    59 PYEYYSLPFCKP-ENIVYKAENLGEVLRGDRIVNTLYTVFMNLDKKCEVL-CKKPESPIK 116

Query:   120 LSKDNFELLKRRIDEMYQV 138
             LS +  +LL  RI E Y +
Sbjct:   117 LSVEESKLLAERIQEEYYI 135

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|A5D7E2 TM9SF4 "Transmembrane 9 superfamily member 4" [Bos taurus (taxid:9913)]

 Score = 166 (63.5 bits), Expect = 2.4e-11, P = 2.4e-11
 Identities = 42/126 (33%), Positives = 64/126 (50%)

Query:    19 WVLFVFFFFQSSC-LG-FYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCKP 76
             W+ +    F   C  G FY+    P     +DP+ +K   +TS  T++P+ YYSL FC+P
Sbjct:     7 WLPWSLLLFSLMCDTGAFYVPGVAPINFHQNDPVEIKAVKLTSSRTQLPYEYYSLPFCQP 66

Query:    77 QEGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIFFC----KTDPLSKDNFELLKRRI 132
              + +   AEN GE+L GDRI N+P++    + +     C    K   L+ +   L+  RI
Sbjct:    67 SK-ITYKAENLGEVLRGDRIVNTPFQVLMNSEKKCEVLCGQSNKPVTLTVEQSRLVAERI 125

Query:   133 DEMYQV 138
              E Y V
Sbjct:   126 SEDYYV 131

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00005630001 SubName- Full=Chromosome undetermined scaffold_155, whole genome shotgun sequence; (656 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	147
pfam02990	518	pfam02990, EMP70, Endomembrane protein 70	7e-13

>gnl|CDD|217309 pfam02990, EMP70, Endomembrane protein 70

 Score = 64.3 bits (157), Expect = 7e-13
 Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 2/78 (2%)

Query: 64  MPFSYYSLSFCKPQEGVKDSAENRGELLMGDRIENSPYRFKTYTNETDIFFCKTDPLSKD 123
            P+ YYSL FC+P E +K  +E+ GE+L GDRI NSPY+ K    +     C    L+ +
Sbjct: 1   EPYEYYSLPFCRP-EKIKHKSESLGEVLFGDRIYNSPYKLKFLEEKECEVLCAV-KLTSE 58

Query: 124 NFELLKRRIDEMYQVFFF 141
           + +  ++ I+E Y V + 
Sbjct: 59  DVKFFRKAIEEGYYVQWL 76

Length = 518

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	147
KOG1278	628	consensus Endosomal membrane proteins, EMP70 [Intr	100.0
KOG1277	593	consensus Endosomal membrane proteins, EMP70 [Intr	99.97
PF02990	521	EMP70: Endomembrane protein 70; InterPro: IPR00424	99.92

>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=4e-39  Score=281.60  Aligned_cols=120  Identities=42%  Similarity=0.739  Sum_probs=113.7

Q ss_pred             HHHHhhcccceeeccCCCCCCCCCCCceEEEEeecccCCCCccccccccCCCCCCCCccccccccccccccCeeecCCce
Q 032114           23 VFFFFQSSCLGFYLRDNYPHKHVVSDPLSVKVNSITSIDTKMPFSYYSLSFCKPQEGVKDSAENRGELLMGDRIENSPYR  102 (147)
Q Consensus        23 ~~~~~~~~~~af~lpg~~p~~Y~~Gd~V~v~vNkl~s~~t~~~Y~Yy~LPfC~p~~~~~~~~~sLGeiL~GDri~~S~y~  102 (147)
                      +.++++.+ .|||+||++|.+|+.||+|+++|||++|.++|.||+||++|||+|+ ++++++|||||+|+||||+||||+
T Consensus        17 ~~~~~~~~-~~FylpG~aPv~f~~gd~i~l~vnklts~~t~lpY~YY~~~Fc~p~-~i~~~~EnLGeVl~GDRi~nSPy~   94 (628)
T KOG1278|consen   17 VSLLLSTS-SAFYLPGVAPVNFCSGDPIELKVNKLTSSRTQLPYEYYSLPFCRPE-KIKKQSENLGEVLRGDRIENSPYK   94 (628)
T ss_pred             HHHHHhcc-cceecCCcCCccCCCCCceEEEEEEeeccccccCcccccccccCcc-ccCCcccchhceeccCcccCCCce
Confidence            34444546 8999999999999999999999999999999999999999999998 789999999999999999999999


Q ss_pred             EEecccccce-eeccccCCCHHHHHHHHHHHhhcceEEEEeecCC
Q 032114          103 FKTYTNETDI-FFCKTDPLSKDNFELLKRRIDEMYQVFFFFRVRS  146 (147)
Q Consensus       103 i~f~~n~~~c-~lC~~~~l~~~~~~~l~~~I~~~Y~~~~~iD~l~  146 (147)
                      ++|++|++ | .+|. .++++++++.++++|+++|++||+|||||
T Consensus        95 ~~m~e~~~-C~~lC~-~k~~~~~~~~l~~~I~~~Y~v~wivDnlP  137 (628)
T KOG1278|consen   95 FKMLENQP-CETLCA-TKLDKEDAKLLKKLIREGYVVNWIVDNLP  137 (628)
T ss_pred             EecccCCc-chhhhc-ccCCHHHHHHHHHHHhhccEeeeeecCCc
Confidence            99999999 9 9998 58999999999999999999999999998

>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.97  E-value=1.3e-30  Score=224.59  Aligned_cols=109  Identities=23%  Similarity=0.441  Sum_probs=101.8

Q ss_pred             ccCCCCCCCCCCCceEEEEeecccC-CCCccccccccCCCCCC-CCccccccccccccccCeeecCCceEEecccccce-
Q 032114           36 LRDNYPHKHVVSDPLSVKVNSITSI-DTKMPFSYYSLSFCKPQ-EGVKDSAENRGELLMGDRIENSPYRFKTYTNETDI-  112 (147)
Q Consensus        36 lpg~~p~~Y~~Gd~V~v~vNkl~s~-~t~~~Y~Yy~LPfC~p~-~~~~~~~~sLGeiL~GDri~~S~y~i~f~~n~~~c-  112 (147)
                      -.....|.|++||+|++||||++|+ |+||+|.||+||||.++ +++++++|+|||+|.|||++.|+|+|+|+.|++ . 
T Consensus        26 ~ade~dh~Yk~~e~VvLw~NkVGPyhNpqETY~YfsLPfC~g~~~~i~hk~etLGEvL~G~eL~~s~y~ikF~~~v~-~~  104 (593)
T KOG1277|consen   26 RADESDHRYKDGEEVVLWMNKVGPYHNPQETYRYFSLPFCSGSKESISHKHETLGEVLQGDELEFSGYEIKFRDNVE-KE  104 (593)
T ss_pred             cccccccccccCCeeEEEEeccCCCCChhhhceeeccceecCCCcccchhhhhHHhhhCCceeeecceeeeecccCC-ce
Confidence            3455679999999999999999999 99999999999999853 268889999999999999999999999999999 7 


Q ss_pred             eeccccCCCHHHHHHHHHHHhhcceEEEEeecCC
Q 032114          113 FFCKTDPLSKDNFELLKRRIDEMYQVFFFFRVRS  146 (147)
Q Consensus       113 ~lC~~~~l~~~~~~~l~~~I~~~Y~~~~~iD~l~  146 (147)
                      ++|. +++++++++.|+++|++.|++||++||||
T Consensus       105 v~C~-~~L~~e~v~~f~~AI~~~Yyfqmy~DdlP  137 (593)
T KOG1277|consen  105 VYCE-KKLSEEKVKAFRYAIENDYYFQMYIDDLP  137 (593)
T ss_pred             eeeh-hhcCHHHHHHHHHHHHhhheeeeeecCce
Confidence            9998 79999999999999999999999999998

>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter

Probab=99.92  E-value=7.5e-26  Score=199.65  Aligned_cols=82  Identities=40%  Similarity=0.812  Sum_probs=77.6

Q ss_pred             ccccccccCCCCCCCCccccccccccccccCeeecCCceEEecccccce-eeccccCCCHHHHHHHHHHHhhcceEEEEe
Q 032114           64 MPFSYYSLSFCKPQEGVKDSAENRGELLMGDRIENSPYRFKTYTNETDI-FFCKTDPLSKDNFELLKRRIDEMYQVFFFF  142 (147)
Q Consensus        64 ~~Y~Yy~LPfC~p~~~~~~~~~sLGeiL~GDri~~S~y~i~f~~n~~~c-~lC~~~~l~~~~~~~l~~~I~~~Y~~~~~i  142 (147)
                      +|||||+||||+|+++++++++||||+|.|||+++|||+++|++|++ | .+|+ ++++++|+++++++|+++|++||+|
T Consensus         1 l~Y~Yy~lPfC~P~~~~~~~~~slGevL~Gdr~~~S~y~i~f~~~~~-c~~lC~-~~l~~~~~~~l~~~I~~~Y~~~~~v   78 (521)
T PF02990_consen    1 LPYDYYDLPFCRPEEGIEHKSESLGEVLRGDRIQNSPYEIKFLQNVT-CKVLCK-KTLTKEDVKKLKEAIENNYRVEMYV   78 (521)
T ss_pred             CCccccCCCCcCCCCccccccCCHHHHhccCceecCceEEEEecCcc-hhhccC-ccCCHHHHHHHHHHHHHhheeeEEe
Confidence            59999999999997337888999999999999999999999999999 9 9998 6999999999999999999999999


Q ss_pred             ecCCC
Q 032114          143 RVRSS  147 (147)
Q Consensus       143 D~l~~  147 (147)
                      ||||.
T Consensus        79 D~LP~   83 (521)
T PF02990_consen   79 DDLPI   83 (521)
T ss_pred             cCceE
Confidence            99984

Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00