Citrus Sinensis ID: 032118

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------
Protein Sequence
MDWSFVHKTWEKWASTSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTEFVDFVKLNKLQTDCFFIGKNQYIVTTIHENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIGPASRAMASADQLAWQLSRRNL
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHccccccHHHHHHHHHcccccccccHHHHHHHHHccccccccHHHHHHHHHHcccccEEEEEccccEEEEEEEccEEEEEcccccccccccEEEEEEHHEEEEHHcccccHHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHcccccccccHEEEEEEEcccccccHHHHHHHHHcccccccccHHHHHHHHHHcccccEEEEEccccEEEEEEccccEEEEEEcccccccccHEEEHHHHEEEHEEccccHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MDWSFVHKTWekwastsvgssgeplKAALLinydptgpsrlLSTIAeregmkadpvdltefvdfvklnklqtdcffigkNQYIVTTIHENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYdgsigpasrAMASADQLAWQLSRRNL
Flexible Loop (DISEMBL)
mdwsfvhktwekwastsvgssgepLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTEFVDFVKLNKLQTDCFFIGKNQYIVTTIHENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIGPASRAMASADQLAWQLSRRNL
Low Complexity Region (SEG)
MDWSFVHKTWEKWASTSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTEFVDFVKLNKLQTDCFFIGKNQYIVTTIHENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIGPASRAMASADQLAWQLSRRNL
Disordered region (IsUnstruct)
**WSFVHKTWEKWASTSV******LKAALLINYDPTGPSRLLSTIAE**GMKADPVDLTEFVDFVKLNKLQTDCFFIGKNQYIVTTIHENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIG*********************
Disordered Region (DISOPRED)
***SFVHKTWEKWASTSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTEFVDFVKLNKLQTDCFFIGKNQYIVTTIHENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIGPASRAMASADQLAWQLSRR**
Disordered Region (DISEMBL)
********TWEKWASTSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTEFVDFVKLNKLQTDCFFIGKNQYIVTTIHENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIGPA*********LAWQLSRRNL
Disordered Region (DISPRO)
*DWSFVHKTWEKWASTSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTEFVDFVKLNKLQTDCFFIGKNQYIVTTIHENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIGPASRAMASADQLAWQLSRRN*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDWSFVHKTWEKWASTSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTEFVDFVKLNKLQTDCFFIGKNQYIVTTIHENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIGPASRAMASADQLAWQLSRRNL
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
388498840	147	unknown [Lotus japonicus]	1.0	1.0	0.775	3e-66
359807337	147	uncharacterized protein LOC100802211 [Gl	1.0	1.0	0.755	2e-65
356573132	147	PREDICTED: uncharacterized protein LOC10	1.0	1.0	0.755	8e-65
296085486	147	unnamed protein product [Vitis vinifera]	1.0	1.0	0.727	4e-62
359474763	521	PREDICTED: protein notum homolog [Vitis	1.0	0.282	0.727	7e-62
255552354	146	conserved hypothetical protein [Ricinus	0.993	1.0	0.693	3e-58
224074635	148	predicted protein [Populus trichocarpa]	1.0	0.993	0.729	5e-58
388515943	146	unknown [Medicago truncatula]	0.993	1.0	0.700	4e-56
449465671	539	PREDICTED: protein notum homolog [Cucumi	1.0	0.272	0.680	1e-53
18415306	148	Profilin family protein [Arabidopsis tha	1.0	0.993	0.668	2e-53

>gi|388498840|gb|AFK37486.1| unknown [Lotus japonicus]

 Score =  256 bits (653), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 114/147 (77%), Positives = 135/147 (91%)

Query: 1   MDWSFVHKTWEKWASTSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTE 60
           MDW FVHKTW+KWAST++G SG PLKAALLINYDPTGPSRLLST+AE+EGMKA+P++L+ 
Sbjct: 1   MDWGFVHKTWDKWASTNIGYSGYPLKAALLINYDPTGPSRLLSTVAEQEGMKANPIELSH 60

Query: 61  FVDFVKLNKLQTDCFFIGKNQYIVTTIHENWFCARCLNTVKAAGEGAIVMQTKAFLLVAL 120
           FV+F+K NKLQT+ F IG NQY+VT+IHENWF ARC+NT+KAAGEGAIVMQT A++LVAL
Sbjct: 61  FVNFIKHNKLQTENFIIGSNQYLVTSIHENWFSARCINTLKAAGEGAIVMQTAAYILVAL 120

Query: 121 YDGSIGPASRAMASADQLAWQLSRRNL 147
           Y+GSIGPASRAMA+ADQL WQL R+NL
Sbjct: 121 YEGSIGPASRAMAAADQLTWQLGRKNL 147

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807337|ref|NP_001241122.1| uncharacterized protein LOC100802211 [Glycine max] gi|255646679|gb|ACU23813.1| unknown [Glycine max]

 Score =  253 bits (645), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 111/147 (75%), Positives = 134/147 (91%)

Query: 1   MDWSFVHKTWEKWASTSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTE 60
           MDW+FVHKTW+KWAST++G SG PLKAALLINYDPTGPSRLLSTIAE+EGM+A+P++L+ 
Sbjct: 1   MDWAFVHKTWDKWASTNIGYSGHPLKAALLINYDPTGPSRLLSTIAEQEGMRANPIELSH 60

Query: 61  FVDFVKLNKLQTDCFFIGKNQYIVTTIHENWFCARCLNTVKAAGEGAIVMQTKAFLLVAL 120
           FVDF+K NKLQT+ F IG NQY++T+IHENWF ARC+NT K AGEGAIV+QT A++LVA+
Sbjct: 61  FVDFIKQNKLQTELFIIGSNQYLITSIHENWFSARCINTSKPAGEGAIVIQTAAYILVAM 120

Query: 121 YDGSIGPASRAMASADQLAWQLSRRNL 147
           Y+GSIGPASRAMA+ADQL WQL R+NL
Sbjct: 121 YEGSIGPASRAMAAADQLTWQLGRKNL 147

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356573132|ref|XP_003554718.1| PREDICTED: uncharacterized protein LOC100811973 [Glycine max]

 Score =  251 bits (640), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 111/147 (75%), Positives = 134/147 (91%)

Query: 1   MDWSFVHKTWEKWASTSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTE 60
           MDW+FVHKTW+KWAST++G SG PLKAALLINYDPTGPSRLLSTIAE+EG++A+P++L+ 
Sbjct: 1   MDWAFVHKTWDKWASTNIGYSGHPLKAALLINYDPTGPSRLLSTIAEQEGIRANPIELSH 60

Query: 61  FVDFVKLNKLQTDCFFIGKNQYIVTTIHENWFCARCLNTVKAAGEGAIVMQTKAFLLVAL 120
           FVDF+K NKLQ++ F IG NQY+VT+IHENWF ARC+NT K AGEGAIV+QT A++LVAL
Sbjct: 61  FVDFIKQNKLQSELFIIGSNQYLVTSIHENWFSARCINTSKPAGEGAIVIQTAAYILVAL 120

Query: 121 YDGSIGPASRAMASADQLAWQLSRRNL 147
           Y+GSIGPASRAMA+ADQL WQL R+NL
Sbjct: 121 YEGSIGPASRAMAAADQLTWQLGRKNL 147

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085486|emb|CBI29218.3| unnamed protein product [Vitis vinifera]

 Score =  242 bits (617), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 107/147 (72%), Positives = 128/147 (87%)

Query: 1   MDWSFVHKTWEKWASTSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTE 60
           MDW+FV K W+KW STS+GSSGEPLKAALLINYDPTGPSRLLSTIAE+EG++A P+++ +
Sbjct: 1   MDWTFVRKAWDKWISTSIGSSGEPLKAALLINYDPTGPSRLLSTIAEQEGIRAKPIEVNQ 60

Query: 61  FVDFVKLNKLQTDCFFIGKNQYIVTTIHENWFCARCLNTVKAAGEGAIVMQTKAFLLVAL 120
           FVDF+K N LQ++ FFIG+NQY+VT+IH+ WFCARC+NT   AGEGAIVMQT +F+LVAL
Sbjct: 61  FVDFIKRNNLQSESFFIGQNQYLVTSIHDGWFCARCMNTSHPAGEGAIVMQTTSFILVAL 120

Query: 121 YDGSIGPASRAMASADQLAWQLSRRNL 147
           YDGSIG ASRAM   DQ AWQL R+NL
Sbjct: 121 YDGSIGSASRAMVDVDQFAWQLGRKNL 147

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359474763|ref|XP_002273920.2| PREDICTED: protein notum homolog [Vitis vinifera]

 Score =  241 bits (615), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 107/147 (72%), Positives = 128/147 (87%)

Query: 1   MDWSFVHKTWEKWASTSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTE 60
           MDW+FV K W+KW STS+GSSGEPLKAALLINYDPTGPSRLLSTIAE+EG++A P+++ +
Sbjct: 375 MDWTFVRKAWDKWISTSIGSSGEPLKAALLINYDPTGPSRLLSTIAEQEGIRAKPIEVNQ 434

Query: 61  FVDFVKLNKLQTDCFFIGKNQYIVTTIHENWFCARCLNTVKAAGEGAIVMQTKAFLLVAL 120
           FVDF+K N LQ++ FFIG+NQY+VT+IH+ WFCARC+NT   AGEGAIVMQT +F+LVAL
Sbjct: 435 FVDFIKRNNLQSESFFIGQNQYLVTSIHDGWFCARCMNTSHPAGEGAIVMQTTSFILVAL 494

Query: 121 YDGSIGPASRAMASADQLAWQLSRRNL 147
           YDGSIG ASRAM   DQ AWQL R+NL
Sbjct: 495 YDGSIGSASRAMVDVDQFAWQLGRKNL 521

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255552354|ref|XP_002517221.1| conserved hypothetical protein [Ricinus communis] gi|223543592|gb|EEF45121.1| conserved hypothetical protein [Ricinus communis]

 Score =  229 bits (583), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 102/147 (69%), Positives = 127/147 (86%), Gaps = 1/147 (0%)

Query: 1   MDWSFVHKTWEKWASTSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTE 60
           MD+SFVHK WEKWAS ++GS G PLKAALLINYDPTGPSRLLSTIAE+EG+K +P++L++
Sbjct: 1   MDFSFVHKAWEKWASLNIGS-GAPLKAALLINYDPTGPSRLLSTIAEQEGIKLNPIELSQ 59

Query: 61  FVDFVKLNKLQTDCFFIGKNQYIVTTIHENWFCARCLNTVKAAGEGAIVMQTKAFLLVAL 120
           F+DF+K NKLQ + F IG +QY+VT++HE+WF ARC+NT K +GEGAI+MQT AFLL+AL
Sbjct: 60  FIDFIKRNKLQMESFIIGTSQYVVTSVHESWFSARCVNTSKPSGEGAIIMQTAAFLLIAL 119

Query: 121 YDGSIGPASRAMASADQLAWQLSRRNL 147
           YDGSI  AS+AM + DQ AWQL R+NL
Sbjct: 120 YDGSIAAASQAMVAVDQFAWQLGRKNL 146

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224074635|ref|XP_002304402.1| predicted protein [Populus trichocarpa] gi|222841834|gb|EEE79381.1| predicted protein [Populus trichocarpa]

 Score =  228 bits (582), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 108/148 (72%), Positives = 122/148 (82%), Gaps = 1/148 (0%)

Query: 1   MDWSFVHKTWEKWASTSVGSS-GEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLT 59
           MDW FVHK WEKW S +VGSS GEPLKAALLINYDP  PSRLLS IAE+EG+ A P +++
Sbjct: 1   MDWGFVHKAWEKWTSINVGSSTGEPLKAALLINYDPNAPSRLLSIIAEQEGINAVPTEVS 60

Query: 60  EFVDFVKLNKLQTDCFFIGKNQYIVTTIHENWFCARCLNTVKAAGEGAIVMQTKAFLLVA 119
           +FVDFVK NKL ++ F IG+NQY+VT+IHEN FCAR L T K AGEGAI+MQT AFLLVA
Sbjct: 61  QFVDFVKRNKLHSENFTIGQNQYVVTSIHENCFCARSLTTSKPAGEGAIIMQTSAFLLVA 120

Query: 120 LYDGSIGPASRAMASADQLAWQLSRRNL 147
           LYDGSIG ASRAM + DQ AWQL RRNL
Sbjct: 121 LYDGSIGAASRAMVAVDQFAWQLGRRNL 148

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388515943|gb|AFK46033.1| unknown [Medicago truncatula]

 Score =  222 bits (566), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 103/147 (70%), Positives = 126/147 (85%), Gaps = 1/147 (0%)

Query: 1   MDWSFVHKTWEKWASTSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTE 60
           MDW FVHKTW+KWAST++G    PLKAALL+N+DPT PSRLLST+AE+EG+K + ++L  
Sbjct: 1   MDWGFVHKTWDKWASTNIGPR-LPLKAALLVNFDPTAPSRLLSTLAEQEGIKVNIIELRH 59

Query: 61  FVDFVKLNKLQTDCFFIGKNQYIVTTIHENWFCARCLNTVKAAGEGAIVMQTKAFLLVAL 120
           FVDF++ N+LQT+ F+IG +QY+VTTIHENWF ARCLNT K AGEGAIVMQT A++LVAL
Sbjct: 60  FVDFIRNNQLQTESFYIGSHQYLVTTIHENWFSARCLNTSKPAGEGAIVMQTAAYILVAL 119

Query: 121 YDGSIGPASRAMASADQLAWQLSRRNL 147
           Y+GSIGPAS AMA+ADQL  QL R+NL
Sbjct: 120 YEGSIGPASCAMAAADQLTAQLGRKNL 146

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449465671|ref|XP_004150551.1| PREDICTED: protein notum homolog [Cucumis sativus]

 Score =  214 bits (544), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 100/147 (68%), Positives = 128/147 (87%)

Query: 1   MDWSFVHKTWEKWASTSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTE 60
           MDW+FVHK W+KWAS S+G+ G+PLKAALLINYDPTGPSRLLSTIAE+EG+  +P++L +
Sbjct: 393 MDWAFVHKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQ 452

Query: 61  FVDFVKLNKLQTDCFFIGKNQYIVTTIHENWFCARCLNTVKAAGEGAIVMQTKAFLLVAL 120
           FVDF+K +K Q + F IG NQYI+T++HENWFCARC+NT+K AGEG I++QT AF+L+A+
Sbjct: 453 FVDFIKRDKPQNESFSIGLNQYIMTSVHENWFCARCMNTIKHAGEGVIIVQTTAFILIAM 512

Query: 121 YDGSIGPASRAMASADQLAWQLSRRNL 147
           YDGSI  ASRAMA+ADQL+W L+R+N 
Sbjct: 513 YDGSIAAASRAMAAADQLSWVLARKNF 539

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18415306|ref|NP_567584.1| Profilin family protein [Arabidopsis thaliana] gi|88900388|gb|ABD57506.1| At4g19400 [Arabidopsis thaliana] gi|332658776|gb|AEE84176.1| Profilin family protein [Arabidopsis thaliana]

 Score =  213 bits (542), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 99/148 (66%), Positives = 122/148 (82%), Gaps = 1/148 (0%)

Query: 1   MDWSFVHKTWEKWAST-SVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLT 59
           MD +FV + W+KW +T +VGSSG PLKAA+LINYDPTGPSRLLSTIA++EG+   PVDL 
Sbjct: 1   MDSAFVDRAWDKWVTTGNVGSSGNPLKAAILINYDPTGPSRLLSTIAKQEGIDIYPVDLK 60

Query: 60  EFVDFVKLNKLQTDCFFIGKNQYIVTTIHENWFCARCLNTVKAAGEGAIVMQTKAFLLVA 119
           +F+DF++   L T+ F +G NQYI+T+IHENWF ARCLNT + AGEGAIVMQT  ++LVA
Sbjct: 61  QFIDFMRCGNLPTETFVLGSNQYIITSIHENWFAARCLNTSQPAGEGAIVMQTAVYVLVA 120

Query: 120 LYDGSIGPASRAMASADQLAWQLSRRNL 147
           LYDGSIG AS+AMA+ADQ A QLSR+N 
Sbjct: 121 LYDGSIGSASQAMAAADQFASQLSRKNF 148

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
TAIR|locus:2140421	148	AT4G19400 [Arabidopsis thalian	0.993	0.986	0.673	1.7e-50
DICTYBASE|DDB_G0274253	192	DDB_G0274253 [Dictyostelium di	0.761	0.583	0.237	0.00024

TAIR|locus:2140421 AT4G19400 [Arabidopsis thaliana (taxid:3702)]

 Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
 Identities = 99/147 (67%), Positives = 122/147 (82%)

Query:     1 MDWSFVHKTWEKWAST-SVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLT 59
             MD +FV + W+KW +T +VGSSG PLKAA+LINYDPTGPSRLLSTIA++EG+   PVDL 
Sbjct:     1 MDSAFVDRAWDKWVTTGNVGSSGNPLKAAILINYDPTGPSRLLSTIAKQEGIDIYPVDLK 60

Query:    60 EFVDFVKLNKLQTDCFFIGKNQYIVTTIHENWFCARCLNTVKAAGEGAIVMQTKAFLLVA 119
             +F+DF++   L T+ F +G NQYI+T+IHENWF ARCLNT + AGEGAIVMQT  ++LVA
Sbjct:    61 QFIDFMRCGNLPTETFVLGSNQYIITSIHENWFAARCLNTSQPAGEGAIVMQTAVYVLVA 120

Query:   120 LYDGSIGPASRAMASADQLAWQLSRRN 146
             LYDGSIG AS+AMA+ADQ A QLSR+N
Sbjct:   121 LYDGSIGSASQAMAAADQFASQLSRKN 147

GO:0003779 "actin binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0007010 "cytoskeleton organization" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0009062 "fatty acid catabolic process" evidence=RCA

DICTYBASE|DDB_G0274253 DDB_G0274253 [Dictyostelium discoideum (taxid:44689)]

 Score = 101 (40.6 bits), Expect = 0.00024, P = 0.00024
 Identities = 28/118 (23%), Positives = 59/118 (50%)

Query:    10 WEKWASTSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTEFVDFVKLNK 69
             +EK+ +  VG     + +A + + D + P ++ + +  ++G+     +  + +D +    
Sbjct:    65 YEKYVNQLVGKF---IMSAAMFSKDFSTP-KIKNIVLAQKGLLIKVNEAIQIIDGINKGT 120

Query:    70 LQTDCFFIGKNQYIVTTIHENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIGP 127
             L  +   I  ++YI+TT+    +    LNT    G G I++  + ++LV+LY  SI P
Sbjct:   121 LHQELISISGSKYIITTVKPRSYYG--LNTNLNVGGGIIIVSLEKYILVSLYPASILP 176


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.132   0.411    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      147       147   0.00091  103 3  11 22  0.44    31
                                                     30  0.50    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  162 KB (2094 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.21u 0.10s 13.31t   Elapsed:  00:00:00
  Total cpu time:  13.21u 0.10s 13.31t   Elapsed:  00:00:00
  Start:  Fri May 10 16:31:22 2013   End:  Fri May 10 16:31:22 2013

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00001212001 SubName- Full=Chromosome chr2 scaffold_113, whole genome shotgun sequence; (147 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	147
PF00235	121	Profilin: Profilin; InterPro: IPR002097 Profilin i	99.42
cd00148	127	PROF Profilin binds actin monomers, membrane polyp	99.08
smart00392	129	PROF Profilin. Binds actin monomers, membrane poly	98.98
PTZ00316	150	profilin; Provisional	97.91
KOG1755	128	consensus Profilin [Cytoskeleton]	96.76
PF07485	123	DUF1529: Domain of Unknown Function (DUF1259); Int	83.51

>PF00235 Profilin: Profilin; InterPro: IPR002097 Profilin is a small eukaryotic protein that binds to monomeric actin (G-actin) in a 1:1 ratio thus preventing the polymerisation of actin into filaments (F-actin)

Probab=99.42  E-value=1.9e-13  Score=97.72  Aligned_cols=118  Identities=23%  Similarity=0.441  Sum_probs=99.4

Q ss_pred             HHHHHhh-hccCCCChhhhhhhhhccCCCCCcchhhhHHhhhCc-ccccchhhHHHHHHhhC-CceeeeEEecCceEEEE
Q 032118            9 TWEKWAS-TSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGM-KADPVDLTEFVDFVKLN-KLQTDCFFIGKNQYIVT   85 (147)
Q Consensus         9 ~wEKwa~-~~VG~sgkplkaA~Lin~dptgpSRLl~~iaeQeG~-~~~~~e~~~fiDfi~~n-nL~tE~f~Ig~nqYlVT   85 (147)
                      .|+.|+. ++++. |. +..|++++.|.       ++.|..++. .++|.|+..|++.++.+ .++.+-|.|++.||.++
T Consensus         1 sW~~~i~~~L~~~-~~-~~~aaI~~~dG-------~vwA~s~~f~~~~~~E~~~i~~~f~~~~~~~~~gi~l~G~kY~~~   71 (121)
T PF00235_consen    1 SWQDYIDEQLIGT-GN-ITKAAIIGSDG-------SVWASSPGFSNISPEEAKAIIKAFNNPSKFPSNGITLGGKKYIVL   71 (121)
T ss_dssp             THHHHHHTHHHTT-SS-ESEEEEEETTS-------SEEEEETTGGGCSHHHHHHHHHHHHSSSHHHHH-EEETTEEEEEE
T ss_pred             ChhHHHHHHhccc-Cc-EeEEEEEcCCC-------CEEEecCCCCCCCHHHHHHHHHHhcCchhcccCCeEEcCcEeEEE
Confidence            3999999 67774 55 99999999665       377888898 99999999999988874 67778999999999999


Q ss_pred             eeecceeeeecccccccCCcceEEEEehhhhhhhhccCCcchhhHHHHHHHHHHHHh
Q 032118           86 TIHENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIGPASRAMASADQLAWQL  142 (147)
Q Consensus        86 sIhe~wf~ARcvNt~~p~GeG~IVmq~~ayiLValy~gSi~~as~am~~~dqf~~ql  142 (147)
                      .-.++..++||      ..+|++|+++..+|+|++|+.++ .+.++-.++++||..|
T Consensus        72 ~~d~~~i~~k~------~~~G~~i~kt~~~ivIg~y~~~~-~~~~~~~~v~~lA~yL  121 (121)
T PF00235_consen   72 RADDNSIYGKK------GKGGIIIVKTKQAIVIGMYDESI-QPGNCNKAVEKLADYL  121 (121)
T ss_dssp             EEETTEEEEEE------TTEEEEEEECSSEEEEEEEETTS-THHHHHHHHHHHHHHH
T ss_pred             ecCCceEEeeC------CCCcEEEEECCCEEEEEEeCCCC-CHHHHHHHHHHHHhhC
Confidence            98887777775      37889999999999999999995 4455888899998765

It can also in certain circumstance promote actin polymerisation. Profilin also binds to polyphosphoinositides such as PIP2. Overall sequence similarity among profilin from organisms which belong to different phyla (ranging from fungi to mammals) is low, but the N-terminal region is relatively well conserved. That region is thought to be involved in the binding to actin. A protein structurally similar to profilin is present in the genome of Variola virus and Vaccinia virus (gene A42R). Some of the proteins in this family are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Ara t 8, Bet v 2, Cyn d 12, Hel a 2, Mer a 1 and Phl p 11.; GO: 0003779 actin binding, 0007010 cytoskeleton organization, 0015629 actin cytoskeleton; PDB: 1ACF_A 3NEC_C 2V8F_B 2V8C_A 2VK3_A 2JKF_A 2JKG_A 1F2K_B 2ACG_A 1YPR_B ....

>cd00148 PROF Profilin binds actin monomers, membrane polyphosphoinositides such as PI(4,5)P2, and poly-L-proline

Probab=99.08  E-value=2.9e-10  Score=84.31  Aligned_cols=121  Identities=19%  Similarity=0.366  Sum_probs=99.0

Q ss_pred             HHHHhh-hccCCCChhhhhhhhhccCCCCCcchhhhHHhhhC-cccccchhhHHHHHHhhC-CceeeeEEecCceEEEEe
Q 032118           10 WEKWAS-TSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREG-MKADPVDLTEFVDFVKLN-KLQTDCFFIGKNQYIVTT   86 (147)
Q Consensus        10 wEKwa~-~~VG~sgkplkaA~Lin~dptgpSRLl~~iaeQeG-~~~~~~e~~~fiDfi~~n-nL~tE~f~Ig~nqYlVTs   86 (147)
                      |+-|+. .++| +| -+.+|+++..|+  ++    +-|.-.| ..++|.|++.++++++.. .++.+=+.+++.||.++.
T Consensus         2 Wq~yvd~~L~~-~g-~~~~aAI~g~d~--g~----vwA~s~~~f~~t~~E~~~i~~~f~d~~~~~~~Gi~l~G~KY~~l~   73 (127)
T cd00148           2 WQAYVDDNLLG-TG-KVDSAAIVGHDD--GS----VWAASAGGFNLTPEEVGTLVAGFKDPDGVFSTGLTLGGQKYMVIR   73 (127)
T ss_pred             hHHHHHHHHhh-cC-CcCEEEEEecCC--CC----eEEecCCCCccCHHHHHHHHHHccCccccccCCEEECCeEEEEEe
Confidence            999999 5888 44 588888899985  33    2345566 899999999999998754 566788999999999999


Q ss_pred             eecceeeeecccccccCCcceEEEEehhhhhhhhccCCcchhhHHHHHHHHHHHHhhhh
Q 032118           87 IHENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIGPASRAMASADQLAWQLSRR  145 (147)
Q Consensus        87 Ihe~wf~ARcvNt~~p~GeG~IVmq~~ayiLValy~gSi~~as~am~~~dqf~~ql~r~  145 (147)
                      .-++++++|-      .++|++|+.|.-.|+|++|+.+ ..+.++-.+|.+|+..|-..
T Consensus        74 ~d~~~i~~kk------~~~Gi~i~kT~~~ivi~~y~e~-~~~g~~~~~v~~ladYL~~~  125 (127)
T cd00148          74 ADDRSIYGKK------GAGGVVIVKTKQALVIGMYEEG-VQPGQANKVVEKLADYLRSQ  125 (127)
T ss_pred             cCccEEEeee------CCCeEEEEECCCEEEEEEcCCC-CCHHHHHHHHHHHHHHHHHc
Confidence            9998888763      2389999999999999999999 45556778888999888654

Profilin can inhibit actin polymerization into F-actin by binding to monomeric actin (G-actin) and terminal F-actin subunits, but - as a regulator of the cytoskeleton - it may also promote actin polymerization. It plays a role in the assembly of branched actin filament networks, by activating WASP via binding to WASP's proline rich domain. Profilin may link the cytoskeleton with major signalling pathways by interacting with components of the phosphatidylinositol cycle and Ras pathway.

>smart00392 PROF Profilin

Probab=98.98  E-value=1.3e-09  Score=80.68  Aligned_cols=121  Identities=21%  Similarity=0.401  Sum_probs=97.3

Q ss_pred             HHHHHhhh-ccCCCChhhhhhhhhccCCCCCcchhhhHHhhhC--c-ccccchhhHHHHHHhhC-CceeeeEEecCceEE
Q 032118            9 TWEKWAST-SVGSSGEPLKAALLINYDPTGPSRLLSTIAEREG--M-KADPVDLTEFVDFVKLN-KLQTDCFFIGKNQYI   83 (147)
Q Consensus         9 ~wEKwa~~-~VG~sgkplkaA~Lin~dptgpSRLl~~iaeQeG--~-~~~~~e~~~fiDfi~~n-nL~tE~f~Ig~nqYl   83 (147)
                      .|+.|+.. .++ +| -+.+|+++..|.       ++-|.-.|  . .+.|.|++.+++.++.. .++.+-+.+++.||.
T Consensus         2 sWq~yvd~~l~~-~g-~~~~AaI~g~dG-------svWA~s~g~~f~~~~~~E~~~i~~~f~~~~~~~~~Gi~l~G~Ky~   72 (129)
T smart00392        2 SWQAYVDNLLVG-SG-CVDAAAIGGKDG-------SVWAASAGGNFQKITPEEIAAIAALFNSLAAVFSNGLTLGGQKYM   72 (129)
T ss_pred             ChHHHHHHHhhc-cC-CCcEEEEEeCCC-------CeeeccCCCCCCcCCHHHHHHHHHHccCcchhccCCeEECCeEEE
Confidence            39999998 566 34 677888888874       45566677  5 57899999999998765 577778999999999


Q ss_pred             EEeeecceeeeecccccccCCcceEEEEehhhhhhhhccCCcchhhHHHHHHHHHHHHhhhh
Q 032118           84 VTTIHENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIGPASRAMASADQLAWQLSRR  145 (147)
Q Consensus        84 VTsIhe~wf~ARcvNt~~p~GeG~IVmq~~ayiLValy~gSi~~as~am~~~dqf~~ql~r~  145 (147)
                      +...-++..++|      ..++|++|+.|.-.|+|++|+.++ .+.++-.+|+.++..|-..
T Consensus        73 ~~~~d~~~i~~k------k~~~Gv~i~kT~~aivI~~y~e~~-~~g~~~~~v~~ladYL~~~  127 (129)
T smart00392       73 VIRADDRSIMGK------KGAGGVVIVKTKQALIIGMYKEGV-QPGQANKTVEKLADYLRSS  127 (129)
T ss_pred             EEEecCcEEEee------cCCceEEEEECCCEEEEEECCCCC-ChHHHHHHHHHHHHHHHHc
Confidence            999888888864      368999999999999999999984 4456677788888887654

Binds actin monomers, membrane polyphosphoinositides and poly-L-proline.

>PTZ00316 profilin; Provisional

Probab=97.91  E-value=3.2e-05  Score=61.42  Aligned_cols=121  Identities=13%  Similarity=0.208  Sum_probs=86.6

Q ss_pred             HHHHHhhh-ccCCCChhhhhhhhhccCCCCCcchhhhHHhhhCcccccchhhHHHHHHhhC-CceeeeEEecCceEEEEe
Q 032118            9 TWEKWAST-SVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTEFVDFVKLN-KLQTDCFFIGKNQYIVTT   86 (147)
Q Consensus         9 ~wEKwa~~-~VG~sgkplkaA~Lin~dptgpSRLl~~iaeQeG~~~~~~e~~~fiDfi~~n-nL~tE~f~Ig~nqYlVTs   86 (147)
                      .|.-|+.. ++| ||+. +.|+++..+.  .|    +-|.-.|..++|.|+..|++.++.. .|+..=+.+++.||++..
T Consensus         2 SWQaYVD~~L~g-sg~v-~kAAIiG~~D--Gs----vWA~S~gF~lspeE~~~I~~~F~d~~~l~~~Gi~l~G~KY~~lr   73 (150)
T PTZ00316          2 SWQAYVDDSLIG-SGNM-HSAAIVGLAD--GS----YWAYGGSYIPQPEEVAHILKCLGNFSLVQSSGVTIYGVKFFGLQ   73 (150)
T ss_pred             CHHHHHHhhhhc-cCCc-ceEEEEecCC--CC----EeecCCCCccCHHHHHHHHHHhcCCccccCCCEEEcceEEEEEE
Confidence            38999996 777 7754 4455566532  22    2445678899999999999988753 566667899999998875


Q ss_pred             e----ecceeeeecccccccCCcceEEEEehhhhhhhhccCCc------------------chhhHHHHHHHHHHHHhh
Q 032118           87 I----HENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSI------------------GPASRAMASADQLAWQLS  143 (147)
Q Consensus        87 I----he~wf~ARcvNt~~p~GeG~IVmq~~ayiLValy~gSi------------------~~as~am~~~dqf~~ql~  143 (147)
                      -    .++..++|      -.++|++++.|.-.|+|+.|+..+                  ....++-.+|+.+++-|-
T Consensus        74 ~~~d~d~~~i~gK------Kg~~G~~i~kT~qaiiI~~y~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~Ve~LadYL~  146 (150)
T PTZ00316         74 SGTEGDMKYIFFK------KGAAGGCIYTSKQTAIIAVYGNPGDTSSLQQDLEKNEAHAVAVNPADCNTTVKRIAEYLI  146 (150)
T ss_pred             eccCCCcceEEEe------cCCCeEEEEEcCCEEEEEEeCCcccccccccccccccccccccCHHHHHHHHHHHHHHHH
Confidence            4    23444433      456899999999999999998842                  234455566777776654

>KOG1755 consensus Profilin [Cytoskeleton]

Probab=96.76  E-value=0.0035  Score=49.00  Aligned_cols=122  Identities=20%  Similarity=0.335  Sum_probs=94.3

Q ss_pred             HHHHhhhccCCCChhhhhhhhhccCCCCCcchhhhHHhhhCcccccchhhHHHHHHh-hCCceeeeEEecCceEEEEeee
Q 032118           10 WEKWASTSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTEFVDFVK-LNKLQTDCFFIGKNQYIVTTIH   88 (147)
Q Consensus        10 wEKwa~~~VG~sgkplkaA~Lin~dptgpSRLl~~iaeQeG~~~~~~e~~~fiDfi~-~nnL~tE~f~Ig~nqYlVTsIh   88 (147)
                      |.-|+..+..-++ -++.|+++-+|-  .    ++=|.-.|.+++|+|+.-|+...+ .+.|..-=..+++.||+|-.--
T Consensus         3 Wq~Yvd~~l~~~~-~v~~AAIvg~~~--~----SVWA~S~~f~~~~~e~~~~v~~F~d~~~~~~~Gl~L~Gqkylv~~ge   75 (128)
T KOG1755|consen    3 WQAYVDDHLLGTG-HVTRAAIVGYDG--G----SVWAASAGFNVKPSEIPAIVAGFKDPGGLAGTGLTLGGQKYLVVRGE   75 (128)
T ss_pred             HHHHHHHhhcccc-ccceeeEEecCC--C----eeEEecCCCcccHHHHHHHHhcccCcccccccceeecccEEEEEecc
Confidence            7788887555444 788899999974  2    677888888999999999876555 4556666788999999988877


Q ss_pred             -cceeeeecccccccCCcceEEEEehhhhhhhhccCCcchhhHHHHHHHHHHHHhhhh
Q 032118           89 -ENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIGPASRAMASADQLAWQLSRR  145 (147)
Q Consensus        89 -e~wf~ARcvNt~~p~GeG~IVmq~~ayiLValy~gSi~~as~am~~~dqf~~ql~r~  145 (147)
                       +..+.      -+...+|+.|+.|..++++++|+--+-|+. +-.+++++++-|.+.
T Consensus        76 ~~~~~~------gk~~~~gv~i~kT~~~li~~~y~e~v~~g~-~~k~ve~LadYL~~~  126 (128)
T KOG1755|consen   76 EGRVIR------GKEGTGGVTIKKTGQALIFSIYKEGVQPGQ-CNKVVESLADYLRES  126 (128)
T ss_pred             cceEEe------cccCCCcEEEEEcceEEEEEEcCCCCCHHH-HHHHHHHHHHHHHhc
Confidence             44444      356778999999999999999997766654 455678888877664

>PF07485 DUF1529: Domain of Unknown Function (DUF1259); InterPro: IPR011094 This family is the lppY/lpqO homologue family

Probab=83.51  E-value=0.96  Score=34.69  Aligned_cols=31  Identities=16%  Similarity=0.427  Sum_probs=26.9

Q ss_pred             cccccchhhHHHHHHhhCCceeeeEEecCceEEEEeeecceee
Q 032118           51 MKADPVDLTEFVDFVKLNKLQTDCFFIGKNQYIVTTIHENWFC   93 (147)
Q Consensus        51 ~~~~~~e~~~fiDfi~~nnL~tE~f~Ig~nqYlVTsIhe~wf~   93 (147)
                      +-+.+.|+.|+++.++++.+.            ||+||.||+.
T Consensus        63 ~vll~~EV~pvi~aL~~~GI~------------vtAlHNH~l~   93 (123)
T PF07485_consen   63 FVLLEDEVNPVISALRKNGIE------------VTALHNHWLF   93 (123)
T ss_pred             EEecHHHHHHHHHHHHHCCce------------EEEEeccccc
Confidence            345678999999999999874            8999999987

They are related to 'probable conserved lipoproteins' LppY and LpqO from Mycobacterium bovis.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	147
1acf_A	125	Profilin I; protein binding, actin-binding protein	99.77
3d9y_A	127	Profilin; yeast, actin-binding, cytoskeleton, prot	99.53
3nec_A	166	Profilin, inflammatory profilin; actin-binding, ac	99.29
1ypr_A	125	Profilin; actin-binding protein, cytoskeleton; 2.3	99.25
3nul_A	130	Profilin I; cytoskeleton, actin binding protein; H	98.83
2v8f_A	140	Profilin-2, profilin IIA; alternative splicing, pr	98.63
2pbd_P	139	Profilin-1, profilin I; ternary complex, profilin,	98.58
2jkg_A	179	Profilin; proline-rich ligand, protein-binding, ma	98.27

>1acf_A Profilin I; protein binding, actin-binding protein, contractIle protein; 2.00A {Acanthamoeba castellanii} SCOP: d.110.1.1 PDB: 1prq_A 2prf_A 1f2k_A 2acg_A

Probab=99.77  E-value=1.8e-19  Score=131.98  Aligned_cols=121  Identities=21%  Similarity=0.387  Sum_probs=105.3

Q ss_pred             HHHHhhh-ccCCCChhhhhhhhhccCCCCCcchhhhHHhhhCcccccchhhHHHHHHhh-CCceeeeEEecCceEEEEee
Q 032118           10 WEKWAST-SVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTEFVDFVKL-NKLQTDCFFIGKNQYIVTTI   87 (147)
Q Consensus        10 wEKwa~~-~VG~sgkplkaA~Lin~dptgpSRLl~~iaeQeG~~~~~~e~~~fiDfi~~-nnL~tE~f~Ig~nqYlVTsI   87 (147)
                      |+.|+.. ++| +|++-+ |++++.|  |     ++.|.++|.+++|.|+++|+++++. ++++.+-|++++.||+|++.
T Consensus         2 Wq~yvd~~L~~-~g~~~~-aAIig~d--G-----svwA~s~~f~~~~~E~~~i~~~f~~~~~~~~~Gi~l~G~KY~~i~~   72 (125)
T 1acf_A            2 WQTYVDTNLVG-TGAVTQ-AAILGLD--G-----NTWATSAGFAVTPAQGTTLAGAFNNADAIRAGGFDLAGVHYVTLRA   72 (125)
T ss_dssp             HHHHHHTTTGG-GTSCSE-EEEEETT--S-----CEEEECTTCCCCHHHHHHHHHHHHCCHHHHHHCEEETTEEEEEEEE
T ss_pred             hHHHHHhhhhh-CCCcce-EEEEcCC--C-----CEEEecCCCccCHHHHHHHHHHhcCcchhhcCCeEECCEEEEEEEe
Confidence            9999999 666 675554 5588885  3     6788899999999999999999984 58999999999999999999


Q ss_pred             ecceeeeecccccccCCcceEEEEehhhhhhhhccCCcchhhHHHHHHHHHHHHhhhhc
Q 032118           88 HENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIGPASRAMASADQLAWQLSRRN  146 (147)
Q Consensus        88 he~wf~ARcvNt~~p~GeG~IVmq~~ayiLValy~gSi~~as~am~~~dqf~~ql~r~~  146 (147)
                      +|+..++|      ..++|++|++|..+|+|++|+.++- +.+++.+|++|++.|.+..
T Consensus        73 d~~~i~~k------k~~~Gv~i~kT~~aivI~~y~~~~~-~g~~~~~ve~ladyL~~~g  124 (125)
T 1acf_A           73 DDRSIYGK------KGSSGVITVKTSKAILVGVYNEKIQ-PGTAANVVEKLADYLIGQG  124 (125)
T ss_dssp             SSSEEEEE------ETTEEEEEEECSSEEEEEEECTTSC-HHHHHHHHHHHHHHHHTTT
T ss_pred             cCcEEEee------cCCCeEEEEECCCEEEEEEcCCCCC-HHHHHHHHHHHHHHHHHcC
Confidence            99876654      4688999999999999999999977 7799999999999998754

>3d9y_A Profilin; yeast, actin-binding, cytoskeleton, protein; 1.65A {Schizosaccharomyces pombe} SCOP: d.110.1.0 PDB: 3dav_A

Probab=99.53  E-value=6e-15  Score=108.19  Aligned_cols=123  Identities=18%  Similarity=0.296  Sum_probs=105.5

Q ss_pred             HHHHHhh-hccCCCChhhhhhhhhccCCCCCcchhhhHHhhhCcccccchhhHHHHHHh-hCCceeeeEEecCceEEEEe
Q 032118            9 TWEKWAS-TSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTEFVDFVK-LNKLQTDCFFIGKNQYIVTT   86 (147)
Q Consensus         9 ~wEKwa~-~~VG~sgkplkaA~Lin~dptgpSRLl~~iaeQeG~~~~~~e~~~fiDfi~-~nnL~tE~f~Ig~nqYlVTs   86 (147)
                      .|+-|+. .++|+  .-+.+|+++..|  |+|    +-|..+|..++|.|++.|++.++ +++++.+-+++++.||.|+.
T Consensus         2 SWq~Yvd~~L~~~--~~~~~aAI~g~d--G~s----vwA~s~gf~~~p~E~~~i~~~f~d~~~~~~~Gl~l~G~Ky~vir   73 (127)
T 3d9y_A            2 SWQAYVDTSLLGT--GKIDRAAIVSRA--GDS----VWAASAGFNLSPQEIQGLAAGFQDPPSMFGTGIILAGQKYITIR   73 (127)
T ss_dssp             CHHHHHHTTTGGG--SSCCEEEEEETT--SSC----EEEECTTCCCCHHHHHHHHHHHHSTTHHHHHCEEETTEEEEEEE
T ss_pred             CHHHHHHHhhccc--CceeeEEEEeCC--CCe----EEEeCCCCccCHHHHHHHHHHhcCcchhhcCCEEEcCeEEEEEE
Confidence            3999999 68873  457777888877  343    46788899999999999999988 57788999999999999999


Q ss_pred             eecceeeeecccccccCCcceEEEEehhhhhhhhccCCcchhhHHHHHHHHHHHHhhhhc
Q 032118           87 IHENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIGPASRAMASADQLAWQLSRRN  146 (147)
Q Consensus        87 Ihe~wf~ARcvNt~~p~GeG~IVmq~~ayiLValy~gSi~~as~am~~~dqf~~ql~r~~  146 (147)
                      .+|+..++|.      .++|++|++|...|+|++|+.++ .+.++..+|+++++.|....
T Consensus        74 ~d~~~i~~kk------g~~Gv~i~kT~~aivi~~y~e~~-~~g~~~~~ve~ladYL~~~G  126 (127)
T 3d9y_A           74 AEGRSIYGKL------QKEGIICVATKLCILVSHYPETT-LPGEAAKITEALADYLVGVG  126 (127)
T ss_dssp             ECSSEEEEEE------TTEEEEEEECSSEEEEEEECTTS-CHHHHHHHHHHHHHHHHHHT
T ss_pred             eCcceEEEEc------CCceEEEEECCCEEEEEEcCCCC-CHHHHHHHHHHHHHHHHHcC
Confidence            9999888764      57899999999999999999998 57789999999999987653

>3nec_A Profilin, inflammatory profilin; actin-binding, actin-binding protein; HET: MSE; 1.70A {Toxoplasma gondii}

Probab=99.29  E-value=1.3e-12  Score=101.52  Aligned_cols=126  Identities=19%  Similarity=0.199  Sum_probs=105.3

Q ss_pred             HHHHhhh-ccCCCChhhhhhhhhc-cCCCCCcchhhhHHhhhCc-------------------------ccccchhhHHH
Q 032118           10 WEKWAST-SVGSSGEPLKAALLIN-YDPTGPSRLLSTIAEREGM-------------------------KADPVDLTEFV   62 (147)
Q Consensus        10 wEKwa~~-~VG~sgkplkaA~Lin-~dptgpSRLl~~iaeQeG~-------------------------~~~~~e~~~fi   62 (147)
                      |+-|+.. ++|.  .-+.+|++++ .|-   |    +-|...|.                         .++|.|+..|+
T Consensus         7 Wq~YVd~~L~~~--g~v~~AAI~g~~DG---~----vWA~s~~~~~~w~~~~~~~y~~~v~~~~g~~~~~~~~~E~~~i~   77 (166)
T 3nec_A            7 WDPVVKEWLVDT--GYCCAGGIANAEDG---V----VFAAAADDDDGWSKLYKDDHEEDTIGEDGNACGKVSINEASTIK   77 (166)
T ss_dssp             CHHHHHHHHTTT--SSCSEEEEEETTTC---C----EEEEEETTSCHHHHHCCCCEEEEEECTTSCEEEEEEECHHHHHH
T ss_pred             HHHHHHHHhhcc--CceeEEEEEecCCC---C----EEeecCCCCcccccccccccccccccccccccccCCHHHHHHHH
Confidence            8999985 7763  5678888888 564   1    23333333                         56899999999


Q ss_pred             HHHhhCCceeeeEEecCceEEEEeeecceeee----ecccccccCCcceEEEEehh-hhhhhhccCCc-chhhHHHHHHH
Q 032118           63 DFVKLNKLQTDCFFIGKNQYIVTTIHENWFCA----RCLNTVKAAGEGAIVMQTKA-FLLVALYDGSI-GPASRAMASAD  136 (147)
Q Consensus        63 Dfi~~nnL~tE~f~Ig~nqYlVTsIhe~wf~A----RcvNt~~p~GeG~IVmq~~a-yiLValy~gSi-~~as~am~~~d  136 (147)
                      +.++.+ ++.+=++||+.||.++...|.+.|+    ||+-..++.| |++|+.|.. +|+|++|+..+ ..+.++..+|+
T Consensus        78 ~~f~~~-~~~~Gl~lgG~KY~~ir~d~~~~~~~~~~~~i~~kK~~~-Gv~i~KT~~~aiVI~~y~e~~~~~~g~~~~~ve  155 (166)
T 3nec_A           78 AAVDDG-SAPNGVWIGGQKYKVVRPEKGFEYNDCTFDITMCARSKG-GAHLIKTPNGSIVIALYDEEKEQDKGNSRTSAL  155 (166)
T ss_dssp             HHHHHS-CCTTCEEETTEEEEEEEEEEEEEETTEEEEEEEEEETTE-EEEEEECTTSEEEEEEEEGGGTCCHHHHHHHHH
T ss_pred             HHhhcC-CccCCeEEeCeEEEEEEecCCccccccceeEEEeccCCc-eEEEEEeCCCEEEEEEccCCCccCHHHHHHHHH
Confidence            999996 6899999999999999999999887    8888788765 999999999 99999999998 67888999999


Q ss_pred             HHHHHhhhhc
Q 032118          137 QLAWQLSRRN  146 (147)
Q Consensus       137 qf~~ql~r~~  146 (147)
                      +|++.|.+..
T Consensus       156 ~ladYL~~~G  165 (166)
T 3nec_A          156 AFAEYLHQSG  165 (166)
T ss_dssp             HHHHHHHHTT
T ss_pred             HHHHHHHHcC
Confidence            9999997653

>1ypr_A Profilin; actin-binding protein, cytoskeleton; 2.30A {Saccharomyces cerevisiae} SCOP: d.110.1.1 PDB: 1k0k_A

Probab=99.25  E-value=2.7e-12  Score=94.20  Aligned_cols=121  Identities=20%  Similarity=0.354  Sum_probs=101.4

Q ss_pred             HHHHhhhccCCCChhhhhhhhhccCCCCCcchhhhHHhhhCcccccchhhHHHHHHhhC-CceeeeEEecCceEEEEeee
Q 032118           10 WEKWASTSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTEFVDFVKLN-KLQTDCFFIGKNQYIVTTIH   88 (147)
Q Consensus        10 wEKwa~~~VG~sgkplkaA~Lin~dptgpSRLl~~iaeQeG~~~~~~e~~~fiDfi~~n-nL~tE~f~Ig~nqYlVTsIh   88 (147)
                      |+.|+..++| +| -+++|+++..|.  ||    +-|..+|..++|.|++.+++.++.. .++.+-+++++.||.+....
T Consensus         2 Wq~yvd~L~~-~g-~~~~aAI~g~DG--~s----vwA~s~~f~~~~~E~~~i~~~f~~~~~~~~~Gl~l~G~KY~~i~~d   73 (125)
T 1ypr_A            2 WQAYTDNLIG-TG-KVDKAVIYSRAG--DA----VWATSGGLSLQPNEIGEIVQGFDNPAGLQSNGLHIQGQKFMLLRAD   73 (125)
T ss_dssp             HHHHHHHHHH-TS-SCSEEEEEETTS--CC----EEEEESCCCCCHHHHHHHHHHTTCTHHHHHHCEEETTEEEEEEEEC
T ss_pred             hHHHHHHHhc-CC-CccEEEEEeCCC--Cc----EEEECCCCccCHHHHHHHHHhccCcchhccCCeEECCEEEEEEecC
Confidence            9999999999 56 788888899854  54    4556689999999999999999753 67888999999999999999


Q ss_pred             cceeeeecccccccCCcceEEEEehhhhhhhhccCCcchhhHHHHHHHHHHHHhhhh
Q 032118           89 ENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIGPASRAMASADQLAWQLSRR  145 (147)
Q Consensus        89 e~wf~ARcvNt~~p~GeG~IVmq~~ayiLValy~gSi~~as~am~~~dqf~~ql~r~  145 (147)
                      ++..++|+      ..+|++|+.|...|+|++|+..+-+ .++-.+|+++++.|...
T Consensus        74 ~~~i~~kk------~~~Gi~i~kT~~aivI~~y~e~~~~-g~~~~~ve~ladYL~~~  123 (125)
T 1ypr_A           74 DRSIYGRH------DAEGVVCVRTKQTVIIAHYPPTVQA-GEATKIVEQLADYLIGV  123 (125)
T ss_dssp             SSEEEEEE------TTEEEEEEECSSEEEEEEECTTSCH-HHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEec------CCceEEEEECCCEEEEEEcCCCCCH-HHHHHHHHHHHHHHHHc
Confidence            99888764      4578999999999999999999665 46667788888887654

>3nul_A Profilin I; cytoskeleton, actin binding protein; HET: MSE; 1.60A {Arabidopsis thaliana} SCOP: d.110.1.1 PDB: 1a0k_A 1cqa_A 1g5u_A

Probab=98.83  E-value=7.2e-09  Score=76.40  Aligned_cols=123  Identities=17%  Similarity=0.274  Sum_probs=99.0

Q ss_pred             HHHHhh-hccCC-CChhhhhhhhhccCCCCCcchhhhHHhhhCc-ccccchhhHHHHHHhh-CCceeeeEEecCceEEEE
Q 032118           10 WEKWAS-TSVGS-SGEPLKAALLINYDPTGPSRLLSTIAEREGM-KADPVDLTEFVDFVKL-NKLQTDCFFIGKNQYIVT   85 (147)
Q Consensus        10 wEKwa~-~~VG~-sgkplkaA~Lin~dptgpSRLl~~iaeQeG~-~~~~~e~~~fiDfi~~-nnL~tE~f~Ig~nqYlVT   85 (147)
                      |+-|+. .++|. +|.-+..|+++..|-   +    +-|.-.|. .++|.|+..|++.++. +.+..+=+.+++.||.|.
T Consensus         2 Wq~YVd~~L~~~~~g~~~~~aAIig~dG---s----vWA~s~gf~~~~p~E~~~i~~~f~d~~~~~~~Gl~l~G~Ky~~i   74 (130)
T 3nul_A            2 WQSYVDDHLMCDVEGNHLTAAAILGQDG---S----VWAQSAKFPQLKPQEIDGIKKDFEEPGFLAPTGLFLGGEKYMVI   74 (130)
T ss_dssp             HHHHHHHTTSCCBTTBCCSEEEEEETTS---C----EEEECTTCCCCCHHHHHHHHHHHHSTTSSTTTCEEETTEEEEEE
T ss_pred             HHHHHHhhhcccccCCcEeeEEEEeCCC---C----EEEcCCCcccCCHHHHHHHHHhccCchhhccCCEEECCeEEEEE
Confidence            999998 57763 354778888888864   2    35777898 9999999999998774 567889999999999999


Q ss_pred             eee-cceeeeecccccccCCcceEEEEehhhhhhhhccCCcchhhHHHHHHHHHHHHhhhhc
Q 032118           86 TIH-ENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIGPASRAMASADQLAWQLSRRN  146 (147)
Q Consensus        86 sIh-e~wf~ARcvNt~~p~GeG~IVmq~~ayiLValy~gSi~~as~am~~~dqf~~ql~r~~  146 (147)
                      ... ++..++|.-      .+|++|+.|...|+|++|+..+-+. ++-.+++.+++.|....
T Consensus        75 r~d~~~~i~~kkg------~~Gv~i~kT~~aivig~y~e~~~~g-~~~~~ve~ladYL~~~G  129 (130)
T 3nul_A           75 QGEQGAVIRGKKG------PGGVTIKKTNQALVFGFYDEPMTGG-QCNLVVERLGDYLIESE  129 (130)
T ss_dssp             EEETTTEEEEEET------TEEEEEEECSSEEEEEEECTTSCHH-HHHHHHHHHHHHHHHTT
T ss_pred             EeCCCcEEEEecC------CCeEEEEECCCEEEEEEcCCCCCHH-HHHHHHHHHHHHHHHcC
Confidence            998 777665532      3589999999999999999997655 57778888888876543

>2v8f_A Profilin-2, profilin IIA; alternative splicing, protein-binding, cytoplasm, acetylation, cytoskeleton, actin-binding; 1.1A {Mus musculus} PDB: 2v8c_A 2vk3_A* 1d1j_A*

Probab=98.63  E-value=1.2e-08  Score=76.55  Aligned_cols=123  Identities=16%  Similarity=0.198  Sum_probs=95.8

Q ss_pred             HHHHhhhccCCCChhhhhhhhhccCCCCCcchhhhHHhhhC--c-ccccchhhHHHHHHhhCCceeeeEEecCceEEEEe
Q 032118           10 WEKWASTSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREG--M-KADPVDLTEFVDFVKLNKLQTDCFFIGKNQYIVTT   86 (147)
Q Consensus        10 wEKwa~~~VG~sgkplkaA~Lin~dptgpSRLl~~iaeQeG--~-~~~~~e~~~fiDfi~~nnL~tE~f~Ig~nqYlVTs   86 (147)
                      |+-|+..+++ +| -+.+|+++.+|-+ ||    +-|.-.|  . .++|.|+..|+ .=....+..+=+++++.||.+..
T Consensus         4 Wq~yvd~L~~-~g-~v~~AAIig~dG~-~s----vWA~s~g~~f~~~~~~E~~~i~-~~d~~~~~~~Gl~l~G~Ky~~ir   75 (140)
T 2v8f_A            4 WQSYVDNLMC-DG-CCQEAAIVGYCDA-KY----VWAATAGGVFQSITPVEIDMIV-GKDREGFFTNGLTLGAKKCSVIR   75 (140)
T ss_dssp             THHHHHHHHT-TS-CEEEEEEEECSSS-CS----EEEECTTSSGGGCCHHHHHHHH-SSCSSHHHHHCEEETTEEEEEEE
T ss_pred             HHHHHHHHhc-cC-CcceEEEEecCCC-cc----EEEECCCCCcccCCHHHHHHHH-cCCccccccCCeEECCEEEEEEe
Confidence            8999999998 45 7788888998731 23    4455667  7 88999999999 42235677788999999999998


Q ss_pred             e----e-cceeeeecccccccCCcc----eEEEEehhhhhhhhccCCcchhhHHHHHHHHHHHHhhhh
Q 032118           87 I----H-ENWFCARCLNTVKAAGEG----AIVMQTKAFLLVALYDGSIGPASRAMASADQLAWQLSRR  145 (147)
Q Consensus        87 I----h-e~wf~ARcvNt~~p~GeG----~IVmq~~ayiLValy~gSi~~as~am~~~dqf~~ql~r~  145 (147)
                      -    . ++.++.|+    +...+|    ++|+.|...|+|++|+..+-+. ++-.+|+.++.-|...
T Consensus        76 ~~l~~d~~~~~di~~----kk~~~G~~~~v~i~KT~~alvI~~y~e~~~~g-~~~~~ve~ladYL~~~  138 (140)
T 2v8f_A           76 DSLYVDGDCTMDIRT----KSQGGEPTYNVAVGRAGRVLVFVMGKEGVHGG-GLNKKAYSMAKYLRDS  138 (140)
T ss_dssp             EETTSTTTCEEEEEE----CCCSSSCCCEEEEEECSSEEEEEEECTTCCHH-HHHHHHHHHHHHHHHT
T ss_pred             cccccCCCceEEEEE----ecCCCCCceeEEEEEcCCEEEEEEcCCCCCHH-HHHHHHHHHHHHHHHc
Confidence            8    4 67766665    445678    9999999999999999996654 6667788888877643

>2pbd_P Profilin-1, profilin I; ternary complex, profilin, actin, poly-proline, loading poly-Pro site, GAB domain, structural protein; HET: HIC ATP; 1.50A {Homo sapiens} SCOP: d.110.1.1 PDB: 1fik_A 1cjf_A 1pfl_A 1fil_A* 2pav_P* 3chw_P* 1awi_A 1cf0_A* 1pne_A 1hlu_P 2btf_P* 3u4l_P* 3ub5_P*

Probab=98.58  E-value=2.2e-08  Score=74.82  Aligned_cols=123  Identities=18%  Similarity=0.266  Sum_probs=96.0

Q ss_pred             HHHHhhhccCCCChhhhhhhhhccCCCCCcchhhhHHhhhC--c-ccccchhhHHHHHHhhCCceeeeEEecCceEEEEe
Q 032118           10 WEKWASTSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREG--M-KADPVDLTEFVDFVKLNKLQTDCFFIGKNQYIVTT   86 (147)
Q Consensus        10 wEKwa~~~VG~sgkplkaA~Lin~dptgpSRLl~~iaeQeG--~-~~~~~e~~~fiDfi~~nnL~tE~f~Ig~nqYlVTs   86 (147)
                      |+-|+..+++ +| -+.+|+++.+|- .||    +-|.-.|  . .++|.|+..|+ .-....+...=+++++.||.+..
T Consensus         3 Wq~Yvd~L~~-~g-~~~~AAIig~dG-~~s----vWA~s~g~~f~~~~~~E~~~i~-~~d~~~~~~~Gl~lgG~Ky~~ir   74 (139)
T 2pbd_P            3 WNAYIDNLMA-DG-TCQDAAIVGYKD-SPS----VWAAVPGKTFVNITPAEVGVLV-GKDRSSFYVNGLTLGGQKCSVIR   74 (139)
T ss_dssp             SHHHHHHHHT-TS-CEEEEEEEESSS-SCE----EEEECTTSSGGGCCHHHHHHHH-SSCCSTHHHHCEEETTEEEEEEE
T ss_pred             hHHHHHHHhc-cC-CcceEEEEecCC-Ccc----EEEECCCCCcccCCHHHHHHHH-ccCcccccccCeEECCEEEEEEe
Confidence            8999999999 45 788888899872 124    3455677  7 88999999999 43447788888999999999998


Q ss_pred             e----e-cceeeeecccccccCCcc----eEEEEehhhhhhhhccCCcchhhHHHHHHHHHHHHhhhh
Q 032118           87 I----H-ENWFCARCLNTVKAAGEG----AIVMQTKAFLLVALYDGSIGPASRAMASADQLAWQLSRR  145 (147)
Q Consensus        87 I----h-e~wf~ARcvNt~~p~GeG----~IVmq~~ayiLValy~gSi~~as~am~~~dqf~~ql~r~  145 (147)
                      -    . ++.+..|+    +...+|    ++|+.|...|+|++|+..+-+. ++-.+|+.++.-|...
T Consensus        75 ~~~~~d~~~~id~~~----kk~~~G~~~~v~i~KT~~alvI~~y~e~~~~g-~~~~~ve~ladYL~~~  137 (139)
T 2pbd_P           75 DSLLQDGEFSMDLRT----KSTGGAPTFNVTVTKTDKTLVLLMGKEGVHGG-LINKKCYEMASHLRRS  137 (139)
T ss_dssp             EETTCTTTCEEEEEE----CCSTTCCCCEEEEEECSSEEEEEEECTTCCHH-HHHHHHHHHHHHHHHT
T ss_pred             cccccCCCcEEeeee----ccCCCCCceEEEEEEcCCEEEEEEcCCCCCHH-HHHHHHHHHHHHHHHc
Confidence            8    5 66774454    345668    9999999999999999996554 5667788888877543

>2jkg_A Profilin; proline-rich ligand, protein-binding, malaria, cytoskeleton; 1.89A {Plasmodium falciparum} PDB: 2jkf_A

Probab=98.27  E-value=8.4e-07  Score=70.83  Aligned_cols=122  Identities=17%  Similarity=0.285  Sum_probs=90.8

Q ss_pred             HHHHhhh-ccCCCChhhhhhhhhcc-CCCCCcchhhhHH-h--------------hhCc--cc----------ccchhhH
Q 032118           10 WEKWAST-SVGSSGEPLKAALLINY-DPTGPSRLLSTIA-E--------------REGM--KA----------DPVDLTE   60 (147)
Q Consensus        10 wEKwa~~-~VG~sgkplkaA~Lin~-dptgpSRLl~~ia-e--------------QeG~--~~----------~~~e~~~   60 (147)
                      |+-|+.. +++ +| -+.+|++++. |-   + +.-.-. +              .+|.  .+          +|.|+..
T Consensus         7 Wq~YVd~~Ll~-tG-~v~~AaI~g~~DG---~-vwA~s~~~~e~~~~~~~w~~~~k~~f~~~v~~e~g~~~~~~~~E~~~   80 (179)
T 2jkg_A            7 WDSYLNDRLLA-TN-QVSGAGLASEEDG---V-VYACVAQGEESDPNFDKWSLFYKEDYDIEVEDENGTKTTKTINEGQT   80 (179)
T ss_dssp             HHHHHHHHTGG-GS-SCSEEEEEETTTC---C-EEEEEESSCTTSTTCCGGGGTCCCCEEEEEECTTCCEEEEEECHHHH
T ss_pred             HHHHHHHhhhh-cC-CEehheeecccCC---C-EEEecCccccccccccchhhhccCCchhhhccccCccccCCHHHHHH
Confidence            9999988 888 56 6778888887 43   2 111111 0              1265  56          8999999


Q ss_pred             HHHHHhhCCceeeeEEecCceEEEEeee-c--------ceeeeecccccccCCcceEEEEe-hhhhhhhhccCCc-chhh
Q 032118           61 FVDFVKLNKLQTDCFFIGKNQYIVTTIH-E--------NWFCARCLNTVKAAGEGAIVMQT-KAFLLVALYDGSI-GPAS  129 (147)
Q Consensus        61 fiDfi~~nnL~tE~f~Ig~nqYlVTsIh-e--------~wf~ARcvNt~~p~GeG~IVmq~-~ayiLValy~gSi-~~as  129 (147)
                      ++..++. .+..+=+.||++||.+...- +        ++.+  |   .+.. +|++|+.| .-.|+|++||-.. ..+.
T Consensus        81 I~~~f~~-~~~~~Gv~lgG~KY~~i~~d~d~~~~~~~~~~i~--g---kKgk-gGv~ivKT~~qaiVIg~YdE~k~~~~g  153 (179)
T 2jkg_A           81 ILVVFNE-GYAPDGVWLGGTKYQFINIERDLEFEGYNFDVAT--C---AKLK-GGLHLVKVPGGNILVVLYDEEKEQDRG  153 (179)
T ss_dssp             HHHHHHH-SCCTTCEEETTEEEEEEEEEEEEEETTEEEEEEE--E---EETT-EEEEEEEETTTEEEEEEEEGGGTCCHH
T ss_pred             HHHHHhc-CCCCCCEEECCEEEEEEEecCCccccCcceeEEE--E---ecCC-CcEEEEEECCCeEEEEEecCCCCcChH
Confidence            9999987 89999999999999999988 4        3322  3   3343 68999999 9999999999984 4445


Q ss_pred             HHHHHHHHHHHHhhh
Q 032118          130 RAMASADQLAWQLSR  144 (147)
Q Consensus       130 ~am~~~dqf~~ql~r  144 (147)
                      ++-.+|+.|+.-|..
T Consensus       154 ~c~~~ve~LadYL~~  168 (179)
T 2jkg_A          154 NSKIAALTFAKELAE  168 (179)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            666777888877754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	147
d1ypra_	125	d.110.1.1 (A:) Profilin (actin-binding protein) {B	5e-05

>d1ypra_ d.110.1.1 (A:) Profilin (actin-binding protein) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 125

class: Alpha and beta proteins (a+b)
fold: Profilin-like
superfamily: Profilin (actin-binding protein)
family: Profilin (actin-binding protein)
domain: Profilin (actin-binding protein)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.3 bits (89), Expect = 5e-05
 Identities = 17/110 (15%), Positives = 40/110 (36%), Gaps = 13/110 (11%)

Query: 25  LKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTEFV-DFVKLNKLQTDCFFIGKNQYI 83
           +  A++ +          +  A   G+   P ++ E V  F     LQ++   I   +++
Sbjct: 15  VDKAVIYSRAGD------AVWATSGGLSLQPNEIGEIVQGFDNPAGLQSNGLHIQGQKFM 68

Query: 84  VTTIHENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIGPASRAMA 133
           +    +     R         EG + ++TK  +++A Y  ++        
Sbjct: 69  LLRADDRSIYGRH------DAEGVVCVRTKQTVIIAHYPPTVQAGEATKI 112

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	147
d1acfa_	125	Profilin (actin-binding protein) {Acanthamoeba cas	99.21
d1ypra_	125	Profilin (actin-binding protein) {Baker's yeast (S	99.19
d3nula_	130	Profilin (actin-binding protein) {Mouse-ear cress	99.02
d1d1ja_	138	Profilin (actin-binding protein) {Human (Homo sapi	98.6
d2pbdp1	139	Profilin (actin-binding protein) {Human (Homo sapi	98.46

>d1acfa_ d.110.1.1 (A:) Profilin (actin-binding protein) {Acanthamoeba castellanii [TaxId: 5755]}

class: Alpha and beta proteins (a+b)
fold: Profilin-like
superfamily: Profilin (actin-binding protein)
family: Profilin (actin-binding protein)
domain: Profilin (actin-binding protein)
species: Acanthamoeba castellanii [TaxId: 5755]

Probab=99.21  E-value=4.5e-12  Score=90.91  Aligned_cols=120  Identities=19%  Similarity=0.339  Sum_probs=101.9

Q ss_pred             HHHHhh-hccCCCChhhhhhhhhccCCCCCcchhhhHHhhhCcccccchhhHHHHHHhhCC-ceeeeEEecCceEEEEee
Q 032118           10 WEKWAS-TSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTEFVDFVKLNK-LQTDCFFIGKNQYIVTTI   87 (147)
Q Consensus        10 wEKwa~-~~VG~sgkplkaA~Lin~dptgpSRLl~~iaeQeG~~~~~~e~~~fiDfi~~nn-L~tE~f~Ig~nqYlVTsI   87 (147)
                      |+-|+. .+||+  +.++.|+++..|-       ++-|.-+|..+.|.|++.|++.++... ++.+-++|++.||+++..
T Consensus         2 Wq~yvd~~L~~t--g~v~~aaI~g~DG-------~vwA~S~gf~~~~~E~~~i~~~f~d~~~~~~~Gi~i~G~KY~~~~~   72 (125)
T d1acfa_           2 WQTYVDTNLVGT--GAVTQAAILGLDG-------NTWATSAGFAVTPAQGTTLAGAFNNADAIRAGGFDLAGVHYVTLRA   72 (125)
T ss_dssp             HHHHHHTTTGGG--TSCSEEEEEETTS-------CEEEECTTCCCCHHHHHHHHHHHHCCHHHHHHCEEETTEEEEEEEE
T ss_pred             hHHHHHHHhccc--cCcceeEEEcCCC-------CEEEECCCCCCCHHHHHHHHHhccChhhhhhCCEEECCeEEEEEec
Confidence            899995 47774  4677788888873       256777999999999999999996543 667889999999999999


Q ss_pred             ecceeeeecccccccCCcceEEEEehhhhhhhhccCCcchhhHHHHHHHHHHHHhhhh
Q 032118           88 HENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIGPASRAMASADQLAWQLSRR  145 (147)
Q Consensus        88 he~wf~ARcvNt~~p~GeG~IVmq~~ayiLValy~gSi~~as~am~~~dqf~~ql~r~  145 (147)
                      .|+..++|+      ..+|++|+.|...|+|++|+.++- +.++-.+++.+++.|-..
T Consensus        73 d~~~i~~kk------~~~Gi~i~kT~~~iiig~y~e~~~-~~~~~~~v~~ladYL~~~  123 (125)
T d1acfa_          73 DDRSIYGKK------GSSGVITVKTSKAILVGVYNEKIQ-PGTAANVVEKLADYLIGQ  123 (125)
T ss_dssp             SSSEEEEEE------TTEEEEEEECSSEEEEEEECTTSC-HHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEEc------CCCCEEEEEcCCEEEEEECCCCCC-HHHHHHHHHHHHHHHHHc
Confidence            999999885      468999999999999999999985 578899999999998654

>d1ypra_ d.110.1.1 (A:) Profilin (actin-binding protein) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Profilin-like
superfamily: Profilin (actin-binding protein)
family: Profilin (actin-binding protein)
domain: Profilin (actin-binding protein)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.19  E-value=4.1e-12  Score=91.12  Aligned_cols=121  Identities=20%  Similarity=0.331  Sum_probs=103.0

Q ss_pred             HHHHhhhccCCCChhhhhhhhhccCCCCCcchhhhHHhhhCcccccchhhHHHHHHhhCC-ceeeeEEecCceEEEEeee
Q 032118           10 WEKWASTSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTEFVDFVKLNK-LQTDCFFIGKNQYIVTTIH   88 (147)
Q Consensus        10 wEKwa~~~VG~sgkplkaA~Lin~dptgpSRLl~~iaeQeG~~~~~~e~~~fiDfi~~nn-L~tE~f~Ig~nqYlVTsIh   88 (147)
                      |+-|+..++|.  .-+..|+++..|.+  +    +-|.-+|..+.|.|++.+++.++... ++.+-|+|++.||+++...
T Consensus         2 Wq~Yvd~L~~~--g~v~~aaI~g~dg~--s----vwA~S~gf~~~~~E~~~i~~~f~~~~~~~~~Gi~i~G~KY~~~~~d   73 (125)
T d1ypra_           2 WQAYTDNLIGT--GKVDKAVIYSRAGD--A----VWATSGGLSLQPNEIGEIVQGFDNPAGLQSNGLHIQGQKFMLLRAD   73 (125)
T ss_dssp             HHHHHHHHHHT--SSCSEEEEEETTSC--C----EEEEESCCCCCHHHHHHHHHHTTCTHHHHHHCEEETTEEEEEEEEC
T ss_pred             HHHHHHhHhcC--CCcCeEEEEeCCCC--e----eEEECCCCCCCHHHHHHHHHHhcCcchhccCCEEEcCeEEEEEecC
Confidence            89999999974  46888999998873  2    45667899999999999999996543 6778899999999999999


Q ss_pred             cceeeeecccccccCCcceEEEEehhhhhhhhccCCcchhhHHHHHHHHHHHHhhhh
Q 032118           89 ENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIGPASRAMASADQLAWQLSRR  145 (147)
Q Consensus        89 e~wf~ARcvNt~~p~GeG~IVmq~~ayiLValy~gSi~~as~am~~~dqf~~ql~r~  145 (147)
                      |+..++|+-+      +|++++.|...|+|++|+.++- +.++-.+++++++.|-..
T Consensus        74 ~~~i~~kk~~------~Gi~i~kT~~~iiig~y~~~~~-~~~~~~~v~~ladYL~~~  123 (125)
T d1ypra_          74 DRSIYGRHDA------EGVVCVRTKQTVIIAHYPPTVQ-AGEATKIVEQLADYLIGV  123 (125)
T ss_dssp             SSEEEEEETT------EEEEEEECSSEEEEEEECTTSC-HHHHHHHHHHHHHHHHHT
T ss_pred             CCeEEEEeCC------CcEEEEECCCEEEEEEcCCCCC-HHHHHHHHHHHHHHHHHc
Confidence            9999988554      6999999999999999999985 577888999999988543

>d3nula_ d.110.1.1 (A:) Profilin (actin-binding protein) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Profilin-like
superfamily: Profilin (actin-binding protein)
family: Profilin (actin-binding protein)
domain: Profilin (actin-binding protein)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.02  E-value=1.9e-10  Score=83.49  Aligned_cols=124  Identities=17%  Similarity=0.288  Sum_probs=98.9

Q ss_pred             HHHHHhhhcc---CCCChhhhhhhhhccCCCCCcchhhhHHhhhCc-ccccchhhHHHHHHhh-CCceeeeEEecCceEE
Q 032118            9 TWEKWASTSV---GSSGEPLKAALLINYDPTGPSRLLSTIAEREGM-KADPVDLTEFVDFVKL-NKLQTDCFFIGKNQYI   83 (147)
Q Consensus         9 ~wEKwa~~~V---G~sgkplkaA~Lin~dptgpSRLl~~iaeQeG~-~~~~~e~~~fiDfi~~-nnL~tE~f~Ig~nqYl   83 (147)
                      .|+-|+.++.   ..+|+ +..|+++..|-       ++-|.-+|. .++|.|++.|+++++. ..++.+=+++++.||+
T Consensus         1 SWq~Yvd~~l~~~~~tg~-v~~AAI~g~DG-------svWA~S~gf~~l~~~E~~~i~~~f~~~~~~~~~Gi~~~G~KY~   72 (130)
T d3nula_           1 SWQSYVDDHLMCDVEGNH-LTAAAILGQDG-------SVWAQSAKFPQLKPQEIDGIKKDFEEPGFLAPTGLFLGGEKYM   72 (130)
T ss_dssp             CHHHHHHHTTSCCBTTBC-CSEEEEEETTS-------CEEEECTTCCCCCHHHHHHHHHHHHSTTSSTTTCEEETTEEEE
T ss_pred             ChHHHHhhhheeecCCCe-EeEEEEEcCCC-------CeeeeCCCCCCCCHHHHHHHHHHhcCccccccCCeEECCeEEE
Confidence            3899998765   33555 67777788775       255666887 6899999999999976 4567778999999999


Q ss_pred             EEeeecce-eeeecccccccCCcceEEEEehhhhhhhhccCCcchhhHHHHHHHHHHHHhhhhcC
Q 032118           84 VTTIHENW-FCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIGPASRAMASADQLAWQLSRRNL  147 (147)
Q Consensus        84 VTsIhe~w-f~ARcvNt~~p~GeG~IVmq~~ayiLValy~gSi~~as~am~~~dqf~~ql~r~~~  147 (147)
                      +....|+. .++|.-      .+|++|+.|...|+|++|+.++ .+.++-.+|+++++.|-..++
T Consensus        73 ~lr~d~~~~i~~kk~------~~Gi~i~KT~~~iIi~~y~~~~-~~g~~~~~ve~LadYL~~~g~  130 (130)
T d3nula_          73 VIQGEQGAVIRGKKG------PGGVTIKKTNQALVFGFYDEPM-TGGQCNLVVERLGDYLIESEL  130 (130)
T ss_dssp             EEEEETTTEEEEEET------TEEEEEEECSSEEEEEEECTTS-CHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEecCCCcEEEEecC------CCeEEEEECCCEEEEEECCCCC-CHHHHHHHHHHHHHHHHHcCC
Confidence            99988764 565543      3599999999999999999987 477888999999999876653

>d1d1ja_ d.110.1.1 (A:) Profilin (actin-binding protein) {Human (Homo sapiens), isoform II [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Profilin-like
superfamily: Profilin (actin-binding protein)
family: Profilin (actin-binding protein)
domain: Profilin (actin-binding protein)
species: Human (Homo sapiens), isoform II [TaxId: 9606]

Probab=98.60  E-value=2.1e-08  Score=73.17  Aligned_cols=130  Identities=15%  Similarity=0.129  Sum_probs=100.4

Q ss_pred             HHHHHhhhccCCCChhhhhhhhhccCCCCCcchhhhHHhhhCcccccchhhHHHHHHhh--CCceeeeEEecCceEEEEe
Q 032118            9 TWEKWASTSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTEFVDFVKL--NKLQTDCFFIGKNQYIVTT   86 (147)
Q Consensus         9 ~wEKwa~~~VG~sgkplkaA~Lin~dptgpSRLl~~iaeQeG~~~~~~e~~~fiDfi~~--nnL~tE~f~Ig~nqYlVTs   86 (147)
                      .|+-|+..++| +| -+..|+++-.|. +||    +-|.-.|..+.+.|...+..++.+  ..|+.+=++|++.||++..
T Consensus         2 ~Wq~Yvd~L~~-~g-~v~~AAI~G~dg-~~s----vWA~S~gf~~~~~e~~ei~~~~~~d~~~~~~~Gi~l~G~Ky~~lr   74 (138)
T d1d1ja_           2 GWQSYVDNLMC-DG-CCQEAAIVGYCD-AKY----VWAATAGGVFQSITPIEIDMIVGKDREGFFTNGLTLGAKKCSVIR   74 (138)
T ss_dssp             CTHHHHHHHST-TS-CEEEEEEEECSS-SCS----EEEECTTSSGGGCCHHHHHHHHCSCSSHHHHHCEEETTEEEEEEE
T ss_pred             chHHHHHhhcc-cc-ccceEEEEecCC-Cce----EEEECCCCCcCccCHHHHHHHhcCChhHHhhcCeEECCcEEEEEe
Confidence            48999999998 44 555566666654 122    446668999999999998887754  4688899999999999988


Q ss_pred             ee-----cceeeeecccccccCCcceEEEEehhhhhhhhccCCcchhhHHHHHHHHHHHHhhhhc
Q 032118           87 IH-----ENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIGPASRAMASADQLAWQLSRRN  146 (147)
Q Consensus        87 Ih-----e~wf~ARcvNt~~p~GeG~IVmq~~ayiLValy~gSi~~as~am~~~dqf~~ql~r~~  146 (147)
                      ..     ++....|-.-.-+-.-+|++|+.|.-.|+|++|+-++-+ .++-.+|++++.-|-+.|
T Consensus        75 ~d~~~~~~~~~~~~~~~~gkk~~~Gv~i~kT~qaiiI~~y~~~~~~-g~~~~~Ve~LadYL~~~n  138 (138)
T d1d1ja_          75 DSLYVDGDCTMDIRTKSQGGEPTYNVAVGRAGRALVIVMGKEGVHG-GTLNKKAYELALYLRRSD  138 (138)
T ss_dssp             EESSSTTCCEEEEEECCSSSCCCCEEEEEECSSEEEEEEECTTCCH-HHHHHHHHHHHHHHHHTC
T ss_pred             ccccccCcceeeecccccCCCCcceEEEEEcCCEEEEEEeCCCCCh-HHHHHHHHHHHHHHHhcC
Confidence            66     345555544444555579999999999999999998765 778899999999887654

>d2pbdp1 d.110.1.1 (P:1-139) Profilin (actin-binding protein) {Human (Homo sapiens), isoform I [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Profilin-like
superfamily: Profilin (actin-binding protein)
family: Profilin (actin-binding protein)
domain: Profilin (actin-binding protein)
species: Human (Homo sapiens), isoform I [TaxId: 9606]

Probab=98.46  E-value=8.8e-08  Score=69.64  Aligned_cols=129  Identities=17%  Similarity=0.179  Sum_probs=95.7

Q ss_pred             HHHHHhhhccCCCChhhhhhhhhccCCCCCcchhhhHHhhhCcccccchhhHHHHHHh--hCCceeeeEEecCceEEEEe
Q 032118            9 TWEKWASTSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTEFVDFVK--LNKLQTDCFFIGKNQYIVTT   86 (147)
Q Consensus         9 ~wEKwa~~~VG~sgkplkaA~Lin~dptgpSRLl~~iaeQeG~~~~~~e~~~fiDfi~--~nnL~tE~f~Ig~nqYlVTs   86 (147)
                      -|+.|+..++| +| -+..|+++-+|-. +    ++-|.-.|..+.+.+...+..++.  ...++.+=+.|++.||++..
T Consensus         2 ~Wq~Yvd~L~~-~g-~v~~AAIiG~~g~-~----svWA~s~g~~~~~~~~~ei~~~~~~d~~~~~~~Gi~l~G~Ky~~lr   74 (139)
T d2pbdp1           2 GWNAYIDNLMA-DG-TCQDAAIVGYKDS-P----SVWAAVPGKTFVNITPAEVGVLVGKDRSSFYVNGLTLGGQKCSVIR   74 (139)
T ss_dssp             CSHHHHHHHHT-TS-CEEEEEEEESSSS-C----EEEEECTTSSGGGCCHHHHHHHHSSCCSTHHHHCEEETTEEEEEEE
T ss_pred             chHHHHHHhhc-cC-CcceEEEEecCCC-c----eEEEECCCCCcCccCHHHHHHHHhcCchhhhhcCeEECCEEEEEEe
Confidence            38999988888 34 5777888888741 2    345666887777777777776664  46888999999999999987


Q ss_pred             ee-----cceeeeecccccccCCcceEEEEehhhhhhhhccCCcchhhHHHHHHHHHHHHhhhh
Q 032118           87 IH-----ENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIGPASRAMASADQLAWQLSRR  145 (147)
Q Consensus        87 Ih-----e~wf~ARcvNt~~p~GeG~IVmq~~ayiLValy~gSi~~as~am~~~dqf~~ql~r~  145 (147)
                      .+     |+.-++|=..+..-.-.|++|+.|...|||++|+-++- +.++-.+|+++++.|-..
T Consensus        75 ~~~~~~~~~~i~~k~~~~g~~~~~gi~i~KT~qalii~~y~e~~~-~g~~~~~ve~LadYL~~~  137 (139)
T d2pbdp1          75 DSLLQDGEFSMDLRTKSTGGAPTFNVTVTKTDKTLVLLMGKEGVH-GGLINKKCYEMASHLRRS  137 (139)
T ss_dssp             EETTCTTTCEEEEEECCSTTCCCCEEEEEECSSEEEEEEECTTCC-HHHHHHHHHHHHHHHHHT
T ss_pred             cccccCCCceEEEeecccCCCCcceEEEEEcCCEEEEEEcCCCCC-hHHHHHHHHHHHHHHHHc
Confidence            65     44445443333332334799999999999999999866 477888999999988543