Citrus Sinensis ID: 032167

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140------
Protein Sequence
MGVLDHLFDLFEITPRRKRRKPWQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVRNVAQALPSPNAADEKLVSLFSDENPNACSIM
Secondary Structure (PSIPRED)
ccHHHHHHHHHccccccccccccEEEEEEEEcccHHHHHHHHHHHHccccEEEEEEEccccEEEEEEEccHHHHHHHHHHHcccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHcccccccccccEEEEEEEEEEcccHHHHHHHHHHHHccccEEEEEcccccEEEEEEEccHHHHHHHHHHcccccEEcccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccEcc
Coil and Loop (DISEMBL)
MGVLDHLFDlfeitprrkrrkpwqTVEIKVKMDCDGCERRVRHAVSSMKGaksvevnrkqsrvtvtghvdpnkvLKKVRstgkraefwpyvpynlvaypyvaqaydkkapsgyvrnvaqalpspnaadEKLVSLFsdenpnacsim
Flexible Loop (DISEMBL)
mgvldhlfdlfeitprrkrrkpwqtveikvkmdcdgceRRVRHAvssmkgaksvevnrkqsrvtvtghvdpnkvlkkvrstgkraefwpyvpyNLVAYPYVAQAYDKKAPSGYVRNVAQALPSPNAADEKLVSLfsdenpnacsim
Low Complexity Region (SEG)
MGVLDHLFDLFEITPRRKRRKPWQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVRNVAQALPSPNAADEKLVSLFSDENPNACSIM
Disordered region (IsUnstruct)
***LDHLFDLFEITPRRKRRKPWQTVEIKVKMDCDGCERRVR*************************HV**NKVLKKVRSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVRNV*****************************
Disordered Region (DISOPRED)
*GVLDHLF****************TVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRAEFWPYV*************************VAQALPSPNAADEKLVSLFSDENPNACSIM
Disordered Region (DISEMBL)
MGVLDHLFDLFEITPRRKRRKPWQTVEIKVKMDCDGCERRVR******************SRVTVTGHVDPNKVLKKVRSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVRNVAQALPSPNAADEKLVSLFSDENPNACSIM
Disordered Region (DISPRO)
*GVLDHLFDLFEITPRRKRRKPWQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVR**AQALPS***ADEKLVSLFSDENPNACSIM
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGVLDHLFDLFEITPRRKRRKPWQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVRNVAQALPSPNAADEKLVSLFSDENPNACSIM
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	146	2.2.26 [Sep-21-2011]
Q9SZN7	153	Heavy metal-associated is	no	no	1.0	0.954	0.529	5e-40

>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1

 Score =  162 bits (411), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 81/153 (52%), Positives = 107/153 (69%), Gaps = 7/153 (4%)

Query: 1   MGVLDHLFDLFEITP--RRKRRKPWQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNR 58
           MGVLDH+ ++F+ +   + K+RK  QTVEIKVKMDC+GCER+VR +V  MKG  SV +  
Sbjct: 1   MGVLDHVSEMFDCSHGHKIKKRKQLQTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEP 60

Query: 59  KQSRVTVTGHVDPNKVLKKV-RSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVRNV 117
           K  +VTV G+VDPNKV+ ++   TGK+ E WPYVPY++VA+PY A  YDKKAPSGYVR V
Sbjct: 61  KAHKVTVVGYVDPNKVVARMSHRTGKKVELWPYVPYDVVAHPYAAGVYDKKAPSGYVRRV 120

Query: 118 ----AQALPSPNAADEKLVSLFSDENPNACSIM 146
                  L   ++ + +  + FSDENP AC +M
Sbjct: 121 DDPGVSQLARASSTEVRYTTAFSDENPAACVVM 153

Heavy-metal-binding protein. Binds lead, cadmium and copper. May be involved in heavy-metal transport.
Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	146
356575644	146	PREDICTED: uncharacterized protein LOC10	1.0	1.0	0.801	2e-64
224111540	150	predicted protein [Populus trichocarpa]	1.0	0.973	0.773	4e-64
255580479	150	metal ion binding protein, putative [Ric	1.0	0.973	0.78	3e-63
356536198	146	PREDICTED: uncharacterized protein LOC10	1.0	1.0	0.780	1e-62
388503066	147	unknown [Lotus japonicus]	1.0	0.993	0.768	6e-62
388497630	146	unknown [Lotus japonicus]	1.0	1.0	0.773	1e-61
356530758	147	PREDICTED: uncharacterized protein LOC10	1.0	0.993	0.768	1e-61
225424182	147	PREDICTED: uncharacterized protein LOC10	1.0	0.993	0.755	2e-61
147776063	170	hypothetical protein VITISV_023249 [Viti	1.0	0.858	0.755	2e-61
225453114	146	PREDICTED: uncharacterized protein LOC10	1.0	1.0	0.705	1e-57

>gi|356575644|ref|XP_003555948.1| PREDICTED: uncharacterized protein LOC100798163 [Glycine max]

 Score =  249 bits (637), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 117/146 (80%), Positives = 130/146 (89%)

Query: 1   MGVLDHLFDLFEITPRRKRRKPWQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQ 60
           MG LD L D F I+ ++K+RKP QTVEIKVKMDCDGCERRVR++VS+M G K VEVNRKQ
Sbjct: 1   MGALDFLSDYFSISTQKKKRKPMQTVEIKVKMDCDGCERRVRNSVSNMSGVKQVEVNRKQ 60

Query: 61  SRVTVTGHVDPNKVLKKVRSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVRNVAQA 120
           SRVTVTG+VD NKVLKKV+STGKRAEFWPY+ YNLVAYPYVAQAYDKKAPSGYV+N  QA
Sbjct: 61  SRVTVTGYVDRNKVLKKVQSTGKRAEFWPYIQYNLVAYPYVAQAYDKKAPSGYVKNTEQA 120

Query: 121 LPSPNAADEKLVSLFSDENPNACSIM 146
           LP+PNA DEKL SLFSD+NPNACSIM
Sbjct: 121 LPNPNAPDEKLTSLFSDDNPNACSIM 146

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224111540|ref|XP_002315894.1| predicted protein [Populus trichocarpa] gi|222864934|gb|EEF02065.1| predicted protein [Populus trichocarpa]

 Score =  248 bits (634), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 116/150 (77%), Positives = 134/150 (89%), Gaps = 4/150 (2%)

Query: 1   MGVLD----HLFDLFEITPRRKRRKPWQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEV 56
           MG LD    +L DLF +  ++++RKP QTV+IKVKMDCDGCERRV+++VSSMKG KSVEV
Sbjct: 1   MGALDDLSDYLSDLFTVARKKRKRKPMQTVDIKVKMDCDGCERRVKNSVSSMKGVKSVEV 60

Query: 57  NRKQSRVTVTGHVDPNKVLKKVRSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVRN 116
           NRKQSRVTV+G+V+PNKVLKKV+STGKRAEFWPYVPYNLVAYPY AQAYDKKAP+GYV+N
Sbjct: 61  NRKQSRVTVSGNVEPNKVLKKVKSTGKRAEFWPYVPYNLVAYPYAAQAYDKKAPAGYVKN 120

Query: 117 VAQALPSPNAADEKLVSLFSDENPNACSIM 146
           V QALPSPNA DE+  S+FSDENPNACSIM
Sbjct: 121 VVQALPSPNATDERFTSMFSDENPNACSIM 150

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255580479|ref|XP_002531065.1| metal ion binding protein, putative [Ricinus communis] gi|223529360|gb|EEF31326.1| metal ion binding protein, putative [Ricinus communis]

 Score =  246 bits (627), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 117/150 (78%), Positives = 133/150 (88%), Gaps = 4/150 (2%)

Query: 1   MGVLD----HLFDLFEITPRRKRRKPWQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEV 56
           MG LD    +L DLF    ++++RKP QTVEIKVKMDCDGCERRV+HAVS++KG KSVEV
Sbjct: 1   MGALDDLSDYLSDLFTYARKKRKRKPMQTVEIKVKMDCDGCERRVKHAVSNIKGVKSVEV 60

Query: 57  NRKQSRVTVTGHVDPNKVLKKVRSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVRN 116
           NRKQSRV V+G+++PNKVLKKVRSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYV+N
Sbjct: 61  NRKQSRVVVSGYIEPNKVLKKVRSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVKN 120

Query: 117 VAQALPSPNAADEKLVSLFSDENPNACSIM 146
           V QALPSPNA DEK  ++FSDENP+ACSIM
Sbjct: 121 VFQALPSPNAPDEKYTTMFSDENPHACSIM 150

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356536198|ref|XP_003536626.1| PREDICTED: uncharacterized protein LOC100785059 [Glycine max]

 Score =  243 bits (621), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 114/146 (78%), Positives = 128/146 (87%)

Query: 1   MGVLDHLFDLFEITPRRKRRKPWQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQ 60
           MG LD L D F ++  +K+RKP QTVEIKVKMDCDGCERRVR++VS+M G K VEVNRKQ
Sbjct: 1   MGALDFLSDYFSVSTPKKKRKPMQTVEIKVKMDCDGCERRVRNSVSNMSGVKQVEVNRKQ 60

Query: 61  SRVTVTGHVDPNKVLKKVRSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVRNVAQA 120
           S+VTVTG+VD NKVLKKV+STGKRAEFWPY+ YNLVAYPYV QAYDKKAPSGYV+N  QA
Sbjct: 61  SKVTVTGYVDRNKVLKKVQSTGKRAEFWPYIQYNLVAYPYVVQAYDKKAPSGYVKNTEQA 120

Query: 121 LPSPNAADEKLVSLFSDENPNACSIM 146
           LP+PNA DEKL SLFSD+NPNACSIM
Sbjct: 121 LPNPNAPDEKLTSLFSDDNPNACSIM 146

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388503066|gb|AFK39599.1| unknown [Lotus japonicus]

 Score =  241 bits (616), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 113/147 (76%), Positives = 131/147 (89%), Gaps = 1/147 (0%)

Query: 1   MGVLDHLFDLFEITPRR-KRRKPWQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRK 59
           MGVLD+L D F ++P   K+RKP QTVEIKVKMDCDGCERRVR++V+ MKG +SVE+NRK
Sbjct: 1   MGVLDYLSDYFSVSPSTGKKRKPMQTVEIKVKMDCDGCERRVRNSVAHMKGVRSVEINRK 60

Query: 60  QSRVTVTGHVDPNKVLKKVRSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVRNVAQ 119
           QS+VTV+G+VD N+VLKKV+STGKRAEFWPY+PYNLVAYPYVAQ YDKKAP GYV+N  Q
Sbjct: 61  QSKVTVSGYVDRNRVLKKVQSTGKRAEFWPYIPYNLVAYPYVAQVYDKKAPPGYVKNSVQ 120

Query: 120 ALPSPNAADEKLVSLFSDENPNACSIM 146
           ALPSPNA D+KL +LFSDENPNACSIM
Sbjct: 121 ALPSPNALDDKLTNLFSDENPNACSIM 147

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388497630|gb|AFK36881.1| unknown [Lotus japonicus]

 Score =  241 bits (614), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 113/146 (77%), Positives = 128/146 (87%)

Query: 1   MGVLDHLFDLFEITPRRKRRKPWQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQ 60
           MG  D L D F ++  RK+RKP QTVEIKVKMDCDGCERRVR++VS+MKG K VEVNRKQ
Sbjct: 1   MGAFDFLSDYFSVSTPRKKRKPMQTVEIKVKMDCDGCERRVRNSVSNMKGVKEVEVNRKQ 60

Query: 61  SRVTVTGHVDPNKVLKKVRSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVRNVAQA 120
           S+V+VTG+VD NKVLKKV+STGKRAEFWPY+ YNLVAYPYVAQAYDKKAPSGYV+N   A
Sbjct: 61  SKVSVTGYVDRNKVLKKVQSTGKRAEFWPYIQYNLVAYPYVAQAYDKKAPSGYVKNTDLA 120

Query: 121 LPSPNAADEKLVSLFSDENPNACSIM 146
           LP+PNA DEKL +LFSD+NPNACSIM
Sbjct: 121 LPNPNAPDEKLTTLFSDDNPNACSIM 146

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356530758|ref|XP_003533947.1| PREDICTED: uncharacterized protein LOC100795068 [Glycine max]

 Score =  240 bits (613), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 113/147 (76%), Positives = 130/147 (88%), Gaps = 1/147 (0%)

Query: 1   MGVLDHLFDLFEITPRR-KRRKPWQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRK 59
           MGVLD++ + F ++P   K+RK  QTVEIKVKMDCDGCERRVR++V  MKG K VEVNRK
Sbjct: 1   MGVLDYISEFFSVSPATGKKRKAMQTVEIKVKMDCDGCERRVRNSVVHMKGVKQVEVNRK 60

Query: 60  QSRVTVTGHVDPNKVLKKVRSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVRNVAQ 119
           QS+VTVTG+VD N+VLKKV+STGKRA+FWPY+PYNLVAYPYVAQAYDKKAPSGYV+N AQ
Sbjct: 61  QSKVTVTGYVDRNRVLKKVQSTGKRADFWPYIPYNLVAYPYVAQAYDKKAPSGYVKNAAQ 120

Query: 120 ALPSPNAADEKLVSLFSDENPNACSIM 146
           ALP+ N+ DEKL SLFSDENPNACSIM
Sbjct: 121 ALPASNSLDEKLTSLFSDENPNACSIM 147

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424182|ref|XP_002284123.1| PREDICTED: uncharacterized protein LOC100254317 isoform 1 [Vitis vinifera] gi|297737722|emb|CBI26923.3| unnamed protein product [Vitis vinifera]

 Score =  239 bits (611), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 111/147 (75%), Positives = 131/147 (89%), Gaps = 1/147 (0%)

Query: 1   MGVLDHLFDLFEITPRRK-RRKPWQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRK 59
           MG LD+  +L  +T  RK +RKP QTV+IKVKMDCDGCERRV++AVSSMKG K+V++NRK
Sbjct: 1   MGALDYFSNLCTVTSTRKSKRKPMQTVDIKVKMDCDGCERRVKNAVSSMKGVKTVDINRK 60

Query: 60  QSRVTVTGHVDPNKVLKKVRSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVRNVAQ 119
           QSRVTV+G VDPNKVLK+V+STGKRAEFWPYVPYNLV YPY+ +AYDKKAPSGYV+NV Q
Sbjct: 61  QSRVTVSGFVDPNKVLKRVKSTGKRAEFWPYVPYNLVYYPYIKEAYDKKAPSGYVKNVVQ 120

Query: 120 ALPSPNAADEKLVSLFSDENPNACSIM 146
           ALPSP+A DE+L +LFSD+NPNACSIM
Sbjct: 121 ALPSPSATDERLTTLFSDDNPNACSIM 147

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147776063|emb|CAN63279.1| hypothetical protein VITISV_023249 [Vitis vinifera]

 Score =  239 bits (611), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 111/147 (75%), Positives = 131/147 (89%), Gaps = 1/147 (0%)

Query: 1   MGVLDHLFDLFEITPRRK-RRKPWQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRK 59
           MG LD+  +L  +T  RK +RKP QTV+IKVKMDCDGCERRV++AVSSMKG K+V++NRK
Sbjct: 1   MGALDYFSNLCTVTSTRKSKRKPMQTVDIKVKMDCDGCERRVKNAVSSMKGVKTVDINRK 60

Query: 60  QSRVTVTGHVDPNKVLKKVRSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVRNVAQ 119
           QSRVTV+G VDPNKVLK+V+STGKRAEFWPYVPYNLV YPY+ +AYDKKAPSGYV+NV Q
Sbjct: 61  QSRVTVSGFVDPNKVLKRVKSTGKRAEFWPYVPYNLVYYPYIKEAYDKKAPSGYVKNVVQ 120

Query: 120 ALPSPNAADEKLVSLFSDENPNACSIM 146
           ALPSP+A DE+L +LFSD+NPNACSIM
Sbjct: 121 ALPSPSATDERLTTLFSDDNPNACSIM 147

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453114|ref|XP_002272293.1| PREDICTED: uncharacterized protein LOC100255386 [Vitis vinifera] gi|296087186|emb|CBI33560.3| unnamed protein product [Vitis vinifera]

 Score =  227 bits (578), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 103/146 (70%), Positives = 125/146 (85%)

Query: 1   MGVLDHLFDLFEITPRRKRRKPWQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQ 60
           MG LD+  +   +T  + +RKP QTVEIKVKMDCDGCERRV++AV+SM+G KSVEV RKQ
Sbjct: 1   MGALDYFSNFCTVTSTKGKRKPMQTVEIKVKMDCDGCERRVKNAVTSMRGVKSVEVIRKQ 60

Query: 61  SRVTVTGHVDPNKVLKKVRSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVRNVAQA 120
           SRVTVTG+VD NKVLK+V+STGKRAEFWPY+PYNLV+YPY  QAYDK+AP+GYVRNV QA
Sbjct: 61  SRVTVTGYVDANKVLKRVKSTGKRAEFWPYIPYNLVSYPYATQAYDKRAPAGYVRNVVQA 120

Query: 121 LPSPNAADEKLVSLFSDENPNACSIM 146
           +  PN  ++++ SLFSD+NPNACSIM
Sbjct: 121 VAVPNDPEDRITSLFSDDNPNACSIM 146

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	146
TAIR|locus:2017759	152	HIPP22 "heavy metal associated	1.0	0.960	0.631	2e-47
TAIR|locus:2026336	152	HIPP20 "heavy metal associated	1.0	0.960	0.618	2.6e-47
TAIR|locus:2157457	149	HIPP21 "heavy metal associated	1.0	0.979	0.617	4.2e-47
TAIR|locus:2135277	158	AT4G39700 [Arabidopsis thalian	0.897	0.829	0.6	4e-42
TAIR|locus:2121199	153	FP6 "farnesylated protein 6" [	1.0	0.954	0.529	9.9e-39
TAIR|locus:2133544	150	AT4G08570 "AT4G08570" [Arabido	0.986	0.96	0.489	6.3e-37
TAIR|locus:2156927	147	HIPP27 "heavy metal associated	0.883	0.877	0.577	1.5e-35
TAIR|locus:2131561	153	HIPP25 "heavy metal associated	1.0	0.954	0.437	1.1e-32
TAIR|locus:2202265	159	AT1G06330 "AT1G06330" [Arabido	0.479	0.440	0.563	7.1e-25
TAIR|locus:4515103273	166	AT3G56891 [Arabidopsis thalian	0.465	0.409	0.521	2.9e-22

TAIR|locus:2017759 HIPP22 "heavy metal associated isoprenylated plant protein 22" [Arabidopsis thaliana (taxid:3702)]

 Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
 Identities = 96/152 (63%), Positives = 121/152 (79%)

Query:     1 MGVLDHLFDLFE----ITPR-RKRRKPWQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVE 55
             MG L++L + F     ++ R RK+RK  QTV IKVK+DCDGCER++++AVSS+KGAKSVE
Sbjct:     1 MGALNYLSEYFSNHFYVSIRKRKKRKVMQTVNIKVKIDCDGCERKIKNAVSSIKGAKSVE 60

Query:    56 VNRKQSRVTVTGHVDPNKVLKKVRSTGKR-AEFWPYVPYNLVAYPYVAQAYDKKAPSGYV 114
             VNRK  +VTV+G+VDP KVLK V+STGK+ AE WPYVPY +VAYPY A AYDK+AP G+V
Sbjct:    61 VNRKMHKVTVSGYVDPKKVLKTVQSTGKKKAELWPYVPYTMVAYPYAAGAYDKRAPPGFV 120

Query:   115 RNVAQALPSPNAADEKLVSLFSDENPNACSIM 146
             R   QA   P + D+KL+SLFSDENPNAC++M
Sbjct:   121 RKSEQAQAQPGSTDDKLMSLFSDENPNACTVM 152

GO:0005737 "cytoplasm" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2026336 HIPP20 "heavy metal associated isoprenylated plant protein 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 94/152 (61%), Positives = 116/152 (76%)

Query:     1 MGVLD----HLFDLFEITPRRKRRKPWQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEV 56
             MG LD    ++ D F +T +R++RK  QTV IKVKMDCDGCERRV++AVSSMKG KSVEV
Sbjct:     1 MGALDSLSEYISDYFRVTRKRRKRKVMQTVNIKVKMDCDGCERRVKNAVSSMKGVKSVEV 60

Query:    57 NRKQSRVTVTGHVDPNKVLKKVRSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVRN 116
             NRK  +VTV+G+V+P KVLK++  TGK+AE WPYVPYN+VAYPY    YDKKAP+GYVR 
Sbjct:    61 NRKIHKVTVSGYVEPKKVLKRIERTGKKAEIWPYVPYNMVAYPYAVGTYDKKAPAGYVRK 120

Query:   117 VAQALPS--PNAADEKLVSLFSDENPNACSIM 146
               Q+     P A +   +SLFSDENPNAC++M
Sbjct:   121 SEQSQLQLLPGAPENHYISLFSDENPNACTVM 152

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2157457 HIPP21 "heavy metal associated isoprenylated plant protein 21" [Arabidopsis thaliana (taxid:3702)]

 Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
 Identities = 92/149 (61%), Positives = 116/149 (77%)

Query:     1 MGVLDHL--FDLFEITPRRKRRKPWQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNR 58
             MG  D++  F  +     + +RKP QTV+IKVKMDCDGCERRVR+ V  MKG KSVEVNR
Sbjct:     1 MGAFDYISSFCSYTYANAKTKRKPLQTVDIKVKMDCDGCERRVRNVVRRMKGVKSVEVNR 60

Query:    59 KQSRVTVTGHVDPNKVLKKVRSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVRNVA 118
             KQSR+TV GHVDPNKVLK+V+STGK+AEFWPY+P ++V YP+    YDK+AP+G++RN  
Sbjct:    61 KQSRITVNGHVDPNKVLKRVKSTGKKAEFWPYIPQHMVYYPFAPGMYDKRAPAGHIRNPT 120

Query:   119 QALPSPNAADEKLVSLFSDENPNA-CSIM 146
             Q+ P+ NA +E  VSLFSD+N +A CSIM
Sbjct:   121 QSFPTANAPEENYVSLFSDDNVHAACSIM 149

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA;IGI

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2135277 AT4G39700 [Arabidopsis thaliana (taxid:3702)]

 Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
 Identities = 81/135 (60%), Positives = 108/135 (80%)

Query:    16 RRKRRKPWQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVL 75
             +RK++K +QTVE+KV+MDCDGC  ++++++SS+KG K+VE+N+KQ +VTV+G+ D +KVL
Sbjct:    24 KRKKKKQFQTVELKVRMDCDGCVLKIKNSLSSLKGVKTVEINKKQQKVTVSGYADASKVL 83

Query:    76 KKVRSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVRNVAQALPSPNAA----DEKL 131
             KK ++TGK+AE WPYVPYNLVA PY+AQAYDKKAP GYVR V   + +   A    D   
Sbjct:    84 KKAKATGKKAEIWPYVPYNLVAQPYIAQAYDKKAPPGYVRKVDPNVTTGTMAVYYDDPSY 143

Query:   132 VSLFSDENPNACSIM 146
              SLFSD+NPNACSIM
Sbjct:   144 TSLFSDDNPNACSIM 158

GO:0005737 "cytoplasm" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2121199 FP6 "farnesylated protein 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
 Identities = 81/153 (52%), Positives = 107/153 (69%)

Query:     1 MGVLDHLFDLFEITP--RRKRRKPWQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNR 58
             MGVLDH+ ++F+ +   + K+RK  QTVEIKVKMDC+GCER+VR +V  MKG  SV +  
Sbjct:     1 MGVLDHVSEMFDCSHGHKIKKRKQLQTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEP 60

Query:    59 KQSRVTVTGHVDPNKVLKKV-RSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVRNV 117
             K  +VTV G+VDPNKV+ ++   TGK+ E WPYVPY++VA+PY A  YDKKAPSGYVR V
Sbjct:    61 KAHKVTVVGYVDPNKVVARMSHRTGKKVELWPYVPYDVVAHPYAAGVYDKKAPSGYVRRV 120

Query:   118 ----AQALPSPNAADEKLVSLFSDENPNACSIM 146
                    L   ++ + +  + FSDENP AC +M
Sbjct:   121 DDPGVSQLARASSTEVRYTTAFSDENPAACVVM 153

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0010286 "heat acclimation" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2133544 AT4G08570 "AT4G08570" [Arabidopsis thaliana (taxid:3702)]

 Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
 Identities = 72/147 (48%), Positives = 106/147 (72%)

Query:     2 GVLDHLFDLFEITPRRKRRKPWQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQ 60
             G ++++ DL +   +RK++K  QTV ++V ++DC+GCER+++H +S +KG KSV+V+ K 
Sbjct:     5 GTMEYISDLLK-KRKRKKKKQMQTVALRVARIDCEGCERKIKHVLSGVKGVKSVDVDVKL 63

Query:    61 SRVTVTGHVDPNKVLKKVRSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVRNVAQ- 119
              +VTVTG++DP KVL+  +ST K+ E WPYVPY +VA PY++QAYDKKAP   VR V   
Sbjct:    64 QKVTVTGYIDPKKVLEAAKSTKKKVELWPYVPYTMVANPYISQAYDKKAPPNMVRKVPDT 123

Query:   120 ALPSPNAADEKLVSLFSDENPNACSIM 146
             A  +    D+    +FSDENPN+C+IM
Sbjct:   124 ASVNETTVDDSYTIMFSDENPNSCAIM 150

GO:0005575 "cellular_component" evidence=ND

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2156927 HIPP27 "heavy metal associated isoprenylated plant protein 27" [Arabidopsis thaliana (taxid:3702)]

 Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
 Identities = 78/135 (57%), Positives = 96/135 (71%)

Query:    18 KRRKPWQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKK 77
             K+ K +Q VEIKVKMDC+GCERRVR +V  MKG   V V+ KQS++TV G V P+KV+ +
Sbjct:    13 KKLKQFQKVEIKVKMDCEGCERRVRKSVEGMKGVSKVTVDPKQSKLTVEGFVQPSKVVHR 72

Query:    78 V-RSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVRN-VAQALPSPNAA----DEKL 131
             V   TGK+AE WPYVPY +V +PY   AYDKKAP GYVRN +A  L +P A     + K 
Sbjct:    73 VMHRTGKKAELWPYVPYEVVPHPYAPGAYDKKAPPGYVRNALADPLVAPLARASSFEVKY 132

Query:   132 VSLFSDENPNACSIM 146
              S FSD+NPNAC+IM
Sbjct:   133 TSAFSDDNPNACTIM 147

GO:0005737 "cytoplasm" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2131561 HIPP25 "heavy metal associated isoprenylated plant protein 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 67/153 (43%), Positives = 102/153 (66%)

Query:     1 MGVLDHLFDLFEITP-RRKRRKPWQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRK 59
             MGVLDH+ + F+ +    KR K  QTV+++V +DC+GCER+VR A+  M+G + V +   
Sbjct:     1 MGVLDHVSEYFDCSHGSSKRHKSLQTVDVRVLIDCEGCERKVRRALEGMRGIRDVTIEPN 60

Query:    60 QSRVTVTGHVDPNKVLKKV-RSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVRNV- 117
               +VTV G+V+PNKV+ ++   TGKRAE +P+VPY++VA+PY +  YD +AP+GYVRN  
Sbjct:    61 AQKVTVVGYVEPNKVVARIIHRTGKRAELYPFVPYDVVAHPYASGVYDNRAPTGYVRNTE 120

Query:   118 ----AQALPSPNAADEKLVSLFSDENPNACSIM 146
                    L   ++ + +  + FSDEN +AC +M
Sbjct:   121 YDPHVSRLARASSTEVRYTTAFSDENASACVVM 153

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2202265 AT1G06330 "AT1G06330" [Arabidopsis thaliana (taxid:3702)]

 Score = 219 (82.2 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
 Identities = 40/71 (56%), Positives = 54/71 (76%)

Query:    24 QTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGK 83
             QT+E++V MDC GCE RV++A+  M+G  +VE++  Q +VTVTG+ D  KVLKKVR TG+
Sbjct:    11 QTIEMRVHMDCVGCESRVKNALQKMRGVDAVEIDMVQQKVTVTGYADQKKVLKKVRKTGR 70

Query:    84 RAEFWPYVPYN 94
             RAE W  +PYN
Sbjct:    71 RAELWQ-LPYN 80

GO:0005507 "copper ion binding" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006825 "copper ion transport" evidence=ISS

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:4515103273 AT3G56891 [Arabidopsis thaliana (taxid:3702)]

 Score = 202 (76.2 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
 Identities = 36/69 (52%), Positives = 52/69 (75%)

Query:    26 VEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRA 85
             VE+ V MDC GCE++VR A+S + G  +VE++  + +VTVTG+VD  +VLK V+ TG+ A
Sbjct:    18 VELLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTGRTA 77

Query:    86 EFWPYVPYN 94
             E+WP+ PYN
Sbjct:    78 EYWPF-PYN 85

GO:0005886 "plasma membrane" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pm.C_LG_X0440 hypothetical protein (150 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	146
cd00371	63	cd00371, HMA, Heavy-metal-associated domain (HMA)	2e-14
pfam00403	62	pfam00403, HMA, Heavy-metal-associated domain	1e-12
COG2608	71	COG2608, CopZ, Copper chaperone [Inorganic ion tra	3e-06
PLN02957	238	PLN02957, PLN02957, copper, zinc superoxide dismut	2e-05
PRK10671	834	PRK10671, copA, copper exporting ATPase; Provision	3e-04
PRK13748	561	PRK13748, PRK13748, putative mercuric reductase; P	0.002

>gnl|CDD|238219 cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones

 Score = 63.4 bits (155), Expect = 2e-14
 Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)

Query: 27 EIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTG--HVDPNKVLKKVRSTGK 83
          E+ V+ M C GC  ++  A+  + G +SVEV+ +  + TV     V P ++L+ +   G 
Sbjct: 1  ELSVEGMTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEYDPEVSPEELLEAIEDAGY 60

Query: 84 RAE 86
          +A 
Sbjct: 61 KAR 63

HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions. Length = 63

>gnl|CDD|215902 pfam00403, HMA, Heavy-metal-associated domain

 Score = 58.4 bits (142), Expect = 1e-12
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 3/62 (4%)

Query: 26 VEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTG---HVDPNKVLKKVRSTG 82
                M C GC ++V  A+S + G  SV V+ +  +VTVTG    +   K+ K +   G
Sbjct: 1  TLRVPGMTCAGCAKKVEKALSKLPGVSSVSVDLETGKVTVTGDPDPLKLEKLKKAIEKAG 60

Query: 83 KR 84
            
Sbjct: 61 YE 62

Length = 62

>gnl|CDD|225328 COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism]

 Score = 42.0 bits (99), Expect = 3e-06
 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 4/69 (5%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKKVR 79
              +KV+ M C  C + V  A+  + G  SV+V+ ++   TVT     VD   +++ + 
Sbjct: 2  MKTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDIEAIIEAIE 61

Query: 80 STGKRAEFW 88
            G + E  
Sbjct: 62 DAGYKVEEI 70

Length = 71

>gnl|CDD|215516 PLN02957, PLN02957, copper, zinc superoxide dismutase

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 18/59 (30%), Positives = 31/59 (52%)

Query: 27 EIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRA 85
          E  V M C+GC   V++ + +++G K+VEV+     V V G      +   +  TG++A
Sbjct: 9  EFMVDMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGSSPVKAMTAALEQTGRKA 67

Length = 238

>gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional

 Score = 39.3 bits (92), Expect = 3e-04
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 32  MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRAE 86
           M C  C  RV++A+ S+ G     VN  +    V G   P  +++ V   G  AE
Sbjct: 108 MSCASCVSRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYGAE 162

Length = 834

>gnl|CDD|184298 PRK13748, PRK13748, putative mercuric reductase; Provisional

 Score = 36.7 bits (85), Expect = 0.002
 Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 32 MDCDGCERRVRHAVSSMKGAKSVEVN--RKQSRVTVTGHVDPNKVLKKVRSTGKRAEF 87
          M CD C   V+ A+  + G +S +V+  +  +++ +     P+ +   V   G RA  
Sbjct: 9  MTCDSCAAHVKDALEKVPGVQSADVSYPKGSAQLAIEVGTSPDALTAAVAGLGYRATL 66

Length = 561

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	146
PF00403	62	HMA: Heavy-metal-associated domain; InterPro: IPR0	99.45
KOG1603	73	consensus Copper chaperone [Inorganic ion transpor	99.33
COG2608	71	CopZ Copper chaperone [Inorganic ion transport and	99.3
KOG4656	247	consensus Copper chaperone for superoxide dismutas	99.29
PLN02957	238	copper, zinc superoxide dismutase	98.49
PRK10671	834	copA copper exporting ATPase; Provisional	98.23
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	98.01
TIGR00003	68	copper ion binding protein. This model describes a	97.79
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	97.57
PRK10671	834	copA copper exporting ATPase; Provisional	97.08
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	96.99
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	96.66
TIGR02052	92	MerP mercuric transport protein periplasmic compon	94.01
COG1888	97	Uncharacterized protein conserved in archaea [Func	92.32
PF02680	95	DUF211: Uncharacterized ArCR, COG1888; InterPro: I	88.65
PF01206	70	TusA: Sulfurtransferase TusA; InterPro: IPR001455	87.07
PRK13748	561	putative mercuric reductase; Provisional	85.84
PRK11198	147	LysM domain/BON superfamily protein; Provisional	85.73

>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures

Probab=99.45  E-value=1.1e-12  Score=79.62  Aligned_cols=58  Identities=34%  Similarity=0.625  Sum_probs=54.2

Q ss_pred             EEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCc
Q 032167           27 EIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKR   84 (146)
Q Consensus        27 ~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~   84 (146)
                      +|+| +|+|++|.++|+++|.+++||.++.+|+.+++++|.++   +++++|.++|+++||+
T Consensus         1 t~~v~~m~C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~~~~~~i~~~i~~~Gy~   62 (62)
T PF00403_consen    1 TFKVPGMTCEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPDKTSIEKIIEAIEKAGYE   62 (62)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTTTSCHHHHHHHHHHTTSE
T ss_pred             CEEECCcccHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecCCCCHHHHHHHHHHhCcC
Confidence            5889 99999999999999999999999999999999999976   4669999999999984

These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....

>KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.33  E-value=1.8e-11  Score=76.99  Aligned_cols=67  Identities=49%  Similarity=0.941  Sum_probs=61.6

Q ss_pred             ceEEEEEEcCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHhcC-CceEEec
Q 032167           23 WQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTG-KRAEFWP   89 (146)
Q Consensus        23 ~~~~~l~V~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~l~~~G-~~a~~~~   89 (146)
                      .++.++++.|+|++|..+|++.|..++||.++.+|...++++|.|.+++..|++.|++.+ .++.+|.
T Consensus         4 ~~~~v~kv~~~C~gc~~kV~~~l~~~~GV~~v~id~~~~kvtV~g~~~p~~vl~~l~k~~~k~~~~~~   71 (73)
T KOG1603|consen    4 IKTVVLKVNMHCEGCARKVKRVLQKLKGVESVDIDIKKQKVTVKGNVDPVKLLKKLKKTGGKRAELWK   71 (73)
T ss_pred             ccEEEEEECcccccHHHHHHHHhhccCCeEEEEecCCCCEEEEEEecCHHHHHHHHHhcCCCceEEec
Confidence            466788889999999999999999999999999999999999999999999999999988 6666664

>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.30  E-value=3.3e-11  Score=75.39  Aligned_cols=66  Identities=27%  Similarity=0.490  Sum_probs=58.4

Q ss_pred             ceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEE--e-eCCHHHHHHHHHhcCCceEEe
Q 032167           23 WQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT--G-HVDPNKVLKKVRSTGKRAEFW   88 (146)
Q Consensus        23 ~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~--g-~~~~~~i~~~l~~~G~~a~~~   88 (146)
                      +.+.+|++ +|+|.+|+..|+++|.+++||.++.+++..+.+.|.  + .++.++|.+++..+||.+..+
T Consensus         1 ~~~~~l~v~~MtC~~C~~~V~~al~~v~gv~~v~v~l~~~~~~V~~d~~~~~~~~i~~ai~~aGy~~~~~   70 (71)
T COG2608           1 MMKTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDIEAIIEAIEDAGYKVEEI   70 (71)
T ss_pred             CceEEEEECCcCcHHHHHHHHHHHhcCCCeeEEEEEcccCeEEEEEcCCcCCHHHHHHHHHHcCCCeeec
Confidence            35678999 999999999999999999999999999999776665  4 379999999999999987654

>KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism]

Probab=99.29  E-value=6.2e-12  Score=92.17  Aligned_cols=94  Identities=28%  Similarity=0.388  Sum_probs=76.8

Q ss_pred             ceEEEEEEcCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHhcCCceEEeccCCCCccCCCccc
Q 032167           23 WQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRAEFWPYVPYNLVAYPYVA  102 (146)
Q Consensus        23 ~~~~~l~V~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~l~~~G~~a~~~~~~~~~~~~~~~~~  102 (146)
                      .-+.+|.|.|+|++|+..|++.|..++||.++++|++.+.+.|.+...+.+|..+|+.+|++|.+.+.+..++..-...-
T Consensus         6 ~~~~efaV~M~cescvnavk~~L~~V~Gi~~vevdle~q~v~v~ts~p~s~i~~~le~tGr~Avl~G~G~psaval~at~   85 (247)
T KOG4656|consen    6 TYEAEFAVQMTCESCVNAVKACLKGVPGINSVEVDLEQQIVSVETSVPPSEIQNTLENTGRDAVLRGAGKPSAVALLATV   85 (247)
T ss_pred             ceeEEEEEechhHHHHHHHHHHhccCCCcceEEEEhhhcEEEEEccCChHHHHHHHHhhChheEEecCCchhHHHHHHHH
Confidence            45678999999999999999999999999999999999999999999999999999999999999988766544322222


Q ss_pred             ccc-cCCCCCCcccC
Q 032167          103 QAY-DKKAPSGYVRN  116 (146)
Q Consensus       103 ~~~-~~~~~~g~~~~  116 (146)
                      +.| .+..++|++|+
T Consensus        86 a~~~~~~~v~GvvRf  100 (247)
T KOG4656|consen   86 AKYTGPQAVQGVVRF  100 (247)
T ss_pred             HHhcCCccceeEEEE
Confidence            222 22255666665

>PLN02957 copper, zinc superoxide dismutase

Probab=98.49  E-value=1.9e-06  Score=65.66  Aligned_cols=72  Identities=25%  Similarity=0.405  Sum_probs=64.4

Q ss_pred             ceEEEEEEcCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHhcCCceEEeccCCCC
Q 032167           23 WQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRAEFWPYVPYN   94 (146)
Q Consensus        23 ~~~~~l~V~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~l~~~G~~a~~~~~~~~~   94 (146)
                      .+++++.++|.|+.|..++++.|.+++||..+.+++..++++|........+.+.+++.|+.+++++....+
T Consensus         5 ~~~~~~~VgMsC~~Ca~~Iek~L~~~~GV~~v~vn~~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~~~~~   76 (238)
T PLN02957          5 ELLTEFMVDMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGSSPVKAMTAALEQTGRKARLIGQGDPE   76 (238)
T ss_pred             cEEEEEEECccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEecCCHHHHHHHHHHcCCcEEEecCCCcc
Confidence            456778889999999999999999999999999999999999987778899999999999999988765544

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.23  E-value=4.7e-06  Score=73.63  Aligned_cols=64  Identities=19%  Similarity=0.458  Sum_probs=57.3

Q ss_pred             eEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHhcCCceEEec
Q 032167           24 QTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRAEFWP   89 (146)
Q Consensus        24 ~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~l~~~G~~a~~~~   89 (146)
                      ++++++| +|+|.+|..+|+++|.+++||.++.+++.  +.++.+..+.+.+.+.+++.||.++...
T Consensus         3 ~~~~l~V~gmtC~~C~~~i~~al~~~~gv~~v~v~~~--~~~v~~~~~~~~i~~~i~~~Gy~~~~~~   67 (834)
T PRK10671          3 QTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSIT--EAHVTGTASAEALIETIKQAGYDASVSH   67 (834)
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCcceEEEeee--EEEEEecCCHHHHHHHHHhcCCcccccc
Confidence            5789999 99999999999999999999999999994  5566666789999999999999998754

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=98.01  E-value=2.4e-05  Score=67.96  Aligned_cols=63  Identities=29%  Similarity=0.550  Sum_probs=56.6

Q ss_pred             eEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CC-HHHHHHHHHhcCCceEE
Q 032167           24 QTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VD-PNKVLKKVRSTGKRAEF   87 (146)
Q Consensus        24 ~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~-~~~i~~~l~~~G~~a~~   87 (146)
                      .+.+|.+ ||+|..|.++|+ +|.+++||....+|+.++++.|..+   .+ .+++...+++.||.+..
T Consensus         2 ~~~~l~v~Gm~Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~~~~~~~~~~~~v~~~gy~~~~   69 (713)
T COG2217           2 RETSLSVEGMTCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPEEVDLPADIVAAVEKAGYSARL   69 (713)
T ss_pred             ceeEEeecCcCcHHHHHHHH-HHhcCCCeeEEEeecccceEEEEecccccccHHHHHHHHHhcCccccc
Confidence            4568999 999999999999 9999999999999999999998854   45 78999999999998876

>TIGR00003 copper ion binding protein

Probab=97.79  E-value=0.00046  Score=39.36  Aligned_cols=61  Identities=20%  Similarity=0.390  Sum_probs=50.0

Q ss_pred             eEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCc
Q 032167           24 QTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKR   84 (146)
Q Consensus        24 ~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~   84 (146)
                      .+..+.+ ++.|..|...+++.+....++....+++....+.+...   .+...+...+...|+.
T Consensus         2 ~~~~~~v~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   66 (68)
T TIGR00003         2 QKFTVQVMSMTCQHCVDKIEKFVGELEGVSKVQVKLEKASVKVEFDAPQATEICIAEAILDAGYE   66 (68)
T ss_pred             cEEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEcCCCEEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence            3457899 99999999999999999999999999999998887642   4666776667776764

This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (Pfam family pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases.

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.57  E-value=0.00041  Score=61.09  Aligned_cols=69  Identities=25%  Similarity=0.484  Sum_probs=63.1

Q ss_pred             eEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCceEEeccCC
Q 032167           24 QTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRAEFWPYVP   92 (146)
Q Consensus        24 ~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a~~~~~~~   92 (146)
                      .++.|.| ||.|.+|+.++++.+.+++||.+.+++...+++.|..+   ..+.++.+.|..+|+.+.......
T Consensus       146 ~~i~L~v~g~~c~s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~~~~pr~i~k~ie~~~~~~~~~~~~~  218 (951)
T KOG0207|consen  146 QKIYLDVLGMTCASCVSKIESILERLRGVKSFSVSLATDTAIVVYDPEITGPRDIIKAIEETGFEASVRPYGD  218 (951)
T ss_pred             CcEEEEeecccccchhhhhHHHHhhccCeeEEEEeccCCceEEEecccccChHHHHHHHHhhcccceeeeccc
Confidence            6889999 99999999999999999999999999999999998754   789999999999999988877533

>PRK10671 copA copper exporting ATPase; Provisional

Probab=97.08  E-value=0.0025  Score=56.59  Aligned_cols=64  Identities=27%  Similarity=0.484  Sum_probs=56.4

Q ss_pred             EEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHhcCCceEEe
Q 032167           25 TVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRAEFW   88 (146)
Q Consensus        25 ~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~l~~~G~~a~~~   88 (146)
                      ++.+.+ +|+|..|...+++.+..++||.++.+++..++..+.+..++.++.+.+++.|+.+.+.
T Consensus       100 ~~~l~V~Gm~Ca~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~~~s~~~I~~~I~~~Gy~a~~~  164 (834)
T PRK10671        100 SQQLLLSGMSCASCVSRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYGAEAI  164 (834)
T ss_pred             eEEEEeCCcCcHHHHHHHHHHHhcCCCceeeeeecCCCeEEEEccCCHHHHHHHHHhcCCCcccc
Confidence            567889 9999999999999999999999999999999888875567888888899999987644

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=96.99  E-value=0.0021  Score=56.77  Aligned_cols=62  Identities=24%  Similarity=0.459  Sum_probs=56.9

Q ss_pred             cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee--CCHHHHHHHHHhcCCceEEeccCC
Q 032167           31 KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH--VDPNKVLKKVRSTGKRAEFWPYVP   92 (146)
Q Consensus        31 ~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~--~~~~~i~~~l~~~G~~a~~~~~~~   92 (146)
                      ||+|..|.+.+++++...+|+.+..+++..+...|..+  .+++.+.+.++..|+.+++.....
T Consensus         2 gmtc~ac~~si~~~~~~~~g~~~i~vsl~~~~~~v~~~~~~~~~~i~~~ied~gf~~~~~~~~~   65 (951)
T KOG0207|consen    2 GMTCSACSNSIEKAISRKPGVQKIEVSLAQKRANVSYDNIVSPESIKETIEDMGFEASLLSDSE   65 (951)
T ss_pred             CccHHHHhhhHHHHHhcCCCceeEEEEeccccceEEEeeccCHHHHHHHhhcccceeeecccCc
Confidence            79999999999999999999999999999999888755  899999999999999999987543

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=96.66  E-value=0.011  Score=52.05  Aligned_cols=66  Identities=26%  Similarity=0.317  Sum_probs=53.5

Q ss_pred             ceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee-CCHHHHHHHHHhcCCceEEe
Q 032167           23 WQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH-VDPNKVLKKVRSTGKRAEFW   88 (146)
Q Consensus        23 ~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~-~~~~~i~~~l~~~G~~a~~~   88 (146)
                      ..+..+.+ +|+|..|.+++++.+..++||..+.+++..+++.+..+ ....++.+.+++.|+.+...
T Consensus        52 ~~r~~l~V~Gm~C~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~~~~~I~~aI~~~Gy~a~~~  119 (741)
T PRK11033         52 GTRYSWKVSGMDCPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESAVQKAGFSLRDE  119 (741)
T ss_pred             CceEEEEECCCCcHHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEecccchHHHHHHHHhcccccccc
Confidence            45677889 99999999999999999999999999999988777633 12266677788888876543

>TIGR02052 MerP mercuric transport protein periplasmic component

Probab=94.01  E-value=0.82  Score=27.99  Aligned_cols=63  Identities=24%  Similarity=0.360  Sum_probs=45.6

Q ss_pred             EEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEe---eCCHHHHHHHHHhcCCceEE
Q 032167           25 TVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTG---HVDPNKVLKKVRSTGKRAEF   87 (146)
Q Consensus        25 ~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g---~~~~~~i~~~l~~~G~~a~~   87 (146)
                      ++.+.+ ++.|..|...++..+....++.....+.......+..   ..+...+...+.+.|+.+++
T Consensus        24 ~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   90 (92)
T TIGR02052        24 TVTLEVPGMTCVACPITVETALQKVDGVSKAEVTFKTKLAVVTFDDEKTNVKALTEATTDAGYPSSL   90 (92)
T ss_pred             EEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence            456778 9999999999999999999988888877777655442   13555555555666766543

This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403).

>COG1888 Uncharacterized protein conserved in archaea [Function unknown]

Probab=92.32  E-value=1.6  Score=28.31  Aligned_cols=66  Identities=14%  Similarity=0.238  Sum_probs=43.6

Q ss_pred             ceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEec-------cCCEEEEEee-CCHHHHHHHHHhcCCceEEe
Q 032167           23 WQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNR-------KQSRVTVTGH-VDPNKVLKKVRSTGKRAEFW   88 (146)
Q Consensus        23 ~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~-------~~~~v~V~g~-~~~~~i~~~l~~~G~~a~~~   88 (146)
                      ..++.|.+ --+-.--.-.+.+.|++++||+.|++..       .+-+++|.|. ++-++|.+.|++.|......
T Consensus         5 iRRlVLDvlKP~~~p~ive~A~~lskl~gVegVNItv~eiD~et~~~~itIeG~~ldydei~~~iE~~Gg~IHSi   79 (97)
T COG1888           5 IRRLVLDVLKPHRGPTIVELALELSKLEGVEGVNITVTEIDVETENLKITIEGTNLDYDEIEEVIEELGGAIHSI   79 (97)
T ss_pred             ceeeeeeecCCcCCCcHHHHHHHHhhcCCcceEEEEEEEeeehhcceEEEEEcCCCCHHHHHHHHHHcCCeeeeh
Confidence            34556666 3332222334556688999988887753       2344567776 99999999999999765443

>PF02680 DUF211: Uncharacterized ArCR, COG1888; InterPro: IPR003831 This entry describes proteins of unknown function

Probab=88.65  E-value=1.6  Score=28.62  Aligned_cols=64  Identities=16%  Similarity=0.308  Sum_probs=42.7

Q ss_pred             ceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEec-----cCC--EEEEEee-CCHHHHHHHHHhcCCceEE
Q 032167           23 WQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNR-----KQS--RVTVTGH-VDPNKVLKKVRSTGKRAEF   87 (146)
Q Consensus        23 ~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~-----~~~--~v~V~g~-~~~~~i~~~l~~~G~~a~~   87 (146)
                      .+++.|.| --+-+.- -.+.+.|+.++||..+++..     ...  +++|.|. ++.++|.+.|++.|.....
T Consensus         4 irRlVLDVlKP~~p~i-~e~A~~l~~~~gV~gVnitv~EvD~ete~lkitiEG~~id~d~i~~~Ie~~Gg~IHS   76 (95)
T PF02680_consen    4 IRRLVLDVLKPHEPSI-VELAKALSELEGVDGVNITVVEVDVETENLKITIEGDDIDFDEIKEAIEELGGVIHS   76 (95)
T ss_dssp             EEEEEEEEEEESSS-H-HHHHHHHHTSTTEEEEEEEEEEE-SSEEEEEEEEEESSE-HHHHHHHHHHTT-EEEE
T ss_pred             eeEEEEEeecCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEeCCCCHHHHHHHHHHcCCeEEe
Confidence            45667777 3343433 45667799999999888753     223  3456687 9999999999999976543

; PDB: 3BPD_I 2RAQ_F 2X3D_E.

>PF01206 TusA: Sulfurtransferase TusA; InterPro: IPR001455 SirA functions as a response regulator as part of a two-component system, where BarA is the sensor kinase

Probab=87.07  E-value=4.3  Score=24.37  Aligned_cols=54  Identities=7%  Similarity=0.078  Sum_probs=39.1

Q ss_pred             EEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee--CCHHHHHHHHHhcCCceEEec
Q 032167           27 EIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH--VDPNKVLKKVRSTGKRAEFWP   89 (146)
Q Consensus        27 ~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~--~~~~~i~~~l~~~G~~a~~~~   89 (146)
                      ++.+ |+.|+...-++.++|..++.         .+.+.|..+  ....+|...++..|+....+.
T Consensus         2 ~lD~rg~~CP~Pll~~~~~l~~l~~---------G~~l~v~~d~~~~~~di~~~~~~~g~~~~~~~   58 (70)
T PF01206_consen    2 TLDLRGLSCPMPLLKAKKALKELPP---------GEVLEVLVDDPAAVEDIPRWCEENGYEVVEVE   58 (70)
T ss_dssp             EEECSS-STTHHHHHHHHHHHTSGT---------T-EEEEEESSTTHHHHHHHHHHHHTEEEEEEE
T ss_pred             EEeCCCCCCCHHHHHHHHHHHhcCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence            5778 99999999999999998732         234555544  455778888999999755553

This system increases the expression of virulence genes and decreases the expression of motility genes []. BarA phosphorylates SirA, thereby activating the protein. Phosphorylated SirA directly activates virulence expression by interacting with hilA and hilC promoters, while repressing the flagellar regulon indirectly by binding to the csrB promoter, which in turn affects flagellar gene expression. Orthologues of SirA from Salmonella spp. can be found throughout proteobacteria, such as GacA in Psuedomonas spp., VarA in Vibrio cholerae, ExpA in Erwinia carotovora, LetA in Legionella pneumophila, and UvrY in Escherichia coli []. A sensor kinase for SirA is present in each of these organisms as well; the sensor kinase is known as BarA in E. coli and Salmonella spp., but has different names in other genera. In different species, SirA/BarA orthologues are required for virulence gene expression, exoenzyme and antibiotic production, motility, and biofilm formation. The structure of SirA consists of an alpha/beta sandwich with a beta-alpha-beta-alpha-beta(2) fold, comprising a mixed four-stranded beta-sheet stacked against two alpha-helices, both of which are nearly parallel to the strands of the beta-sheet []. Several uncharacterised bacterial proteins (73 to 81 amino-acid residues in length) that contain a well-conserved region in their N-terminal region show structural similarity to the SirA protein, including the E. coli protein YedF (P0AA31 from SWISSPROT), and other members of the UPF0033 family.; GO: 0016783 sulfurtransferase activity, 0008033 tRNA processing, 0005737 cytoplasm; PDB: 3LVJ_D 3LVK_B 1DCJ_A 3HZ7_A 1JDQ_A 1JE3_A 1PAV_A.

>PRK13748 putative mercuric reductase; Provisional

Probab=85.84  E-value=7.6  Score=32.86  Aligned_cols=64  Identities=23%  Similarity=0.440  Sum_probs=49.1

Q ss_pred             EEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEe--eCCHHHHHHHHHhcCCceEEecc
Q 032167           27 EIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTG--HVDPNKVLKKVRSTGKRAEFWPY   90 (146)
Q Consensus        27 ~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g--~~~~~~i~~~l~~~G~~a~~~~~   90 (146)
                      .+.+ ++.|..|..+++..+...+++....++.......+..  ..+...+...+...++..+....
T Consensus         3 ~i~i~g~~C~~c~~~ie~~l~~~~gv~~a~~~~~~~~~~v~~~~~~~~~~i~~~i~~~g~~~~~~~~   69 (561)
T PRK13748          3 TLKITGMTCDSCAAHVKDALEKVPGVQSADVSYPKGSAQLAIEVGTSPDALTAAVAGLGYRATLADA   69 (561)
T ss_pred             EEEECCeecHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCeeeccCc
Confidence            4667 9999999999999999999998888888888766653  24556666667777877665554

>PRK11198 LysM domain/BON superfamily protein; Provisional

Probab=85.73  E-value=3.7  Score=28.91  Aligned_cols=69  Identities=17%  Similarity=0.283  Sum_probs=41.5

Q ss_pred             Cchhhhhhhcccc--CccccCCCCceEEEEEEcCcChhhHHHHHHHHhCC-CCceEEEEeccCCEEEEEeeCCHHHHHHH
Q 032167            1 MGVLDHLFDLFEI--TPRRKRRKPWQTVEIKVKMDCDGCERRVRHAVSSM-KGAKSVEVNRKQSRVTVTGHVDPNKVLKK   77 (146)
Q Consensus         1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~V~m~C~~C~~kv~k~l~~~-~GV~~v~vd~~~~~v~V~g~~~~~~i~~~   77 (146)
                      ||+|+|+..-=.+  +.... +.           .-..-..+|.++|.+. -+...+++...++.|++.|.+......++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~-~~-----------~~~~~~~~i~~~i~~~~~~~~~i~V~v~~G~v~l~G~v~s~~~~~~   68 (147)
T PRK11198          1 MGLFSFVKEAGEKLFDAVTA-QA-----------DNEDAADALKEHISKQGLGDADVNVQVEDGKATVSGDAASQEAKEK   68 (147)
T ss_pred             CcHHHHHHHHHHHhcCCCCc-cc-----------chHHHHHHHHHHHHhcCCCcCCceEEEeCCEEEEEEEeCCHHHHHH
Confidence            9999999874321  21111 10           1144556777777642 23445666677999999998666665665


Q ss_pred             HHhc
Q 032167           78 VRST   81 (146)
Q Consensus        78 l~~~   81 (146)
                      +...
T Consensus        69 ~~~a   72 (147)
T PRK11198         69 ILLA   72 (147)
T ss_pred             HHHH
Confidence            5533

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	146
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	6e-25
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	9e-21
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	1e-20
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	5e-18
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	1e-17
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	4e-11
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	5e-11
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	5e-10
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	7e-08
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	2e-07
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	2e-07
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	5e-06
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	3e-07
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	3e-07
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	4e-07
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	4e-07
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	4e-07
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	4e-07
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	4e-07
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	7e-07
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	4e-05
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	8e-07
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	2e-06
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	3e-06
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	4e-06
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	3e-06
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	4e-06
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	8e-06
2kkh_A	95	Putative heavy metal transporter; zinc transport,	8e-06
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	8e-06
2kyz_A	67	Heavy metal binding protein; structural genomics,	1e-05
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	1e-05
2ofg_X	111	Zinc-transporting ATPase; ferredoxin-like fold, be	2e-05
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	3e-05
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	3e-05
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	7e-05
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	7e-05
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	1e-04
1jww_A	80	Potential copper-transporting ATPase; beta-alpha-b	1e-04
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	2e-04

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 98

 Score = 90.7 bits (225), Expect = 6e-25
 Identities = 18/76 (23%), Positives = 33/76 (43%)

Query: 13 ITPRRKRRKPWQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPN 72
          +      +    T+E  V+M C  C   VR ++  + G + VEV+ +   V V   +   
Sbjct: 8  MASDSGNQGTLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQ 67

Query: 73 KVLKKVRSTGKRAEFW 88
          +V   +  TG++A   
Sbjct: 68 EVQALLEGTGRQAVLK 83

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 222

 Score = 83.2 bits (205), Expect = 9e-21
 Identities = 16/96 (16%), Positives = 34/96 (35%)

Query: 26  VEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRA 85
               + M C+ C   ++  + ++ G  S+  + +Q  ++V   V P+ ++  +R+ GK A
Sbjct: 8   ATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDA 67

Query: 86  EFWPYVPYNLVAYPYVAQAYDKKAPSGYVRNVAQAL 121
                   N  A   +               V    
Sbjct: 68  IIRGAGKPNSSAVAILETFQKYTIDQKKDTAVRGLA 103

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A Length = 68

 Score = 78.6 bits (194), Expect = 1e-20
 Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 1/65 (1%)

Query: 24 QTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGK 83
             E  V M C GC   V   ++ + G K  +++    +V +      + +L  ++ TGK
Sbjct: 2  PKHEFSVDMTCGGCAEAVSRVLNKLGGVK-YDIDLPNKKVCIESEHSMDTLLATLKKTGK 60

Query: 84 RAEFW 88
             + 
Sbjct: 61 TVSYL 65

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A Length = 73

 Score = 72.5 bits (178), Expect = 5e-18
 Identities = 13/63 (20%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 24 QTVEIKVKMDCDGCERRVRHAVSSMK-GAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTG 82
          +  +  V M C GC   V   ++ ++     ++++ ++  V V   +  + +L+K++ TG
Sbjct: 5  KHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTG 64

Query: 83 KRA 85
          K  
Sbjct: 65 KEV 67

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 249

 Score = 76.0 bits (186), Expect = 1e-17
 Identities = 16/92 (17%), Positives = 34/92 (36%)

Query: 26  VEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRA 85
               + M C+ C   ++  + ++ G  S+  + +Q  ++V   V P+ ++  +R+ GK A
Sbjct: 9   ATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDA 68

Query: 86  EFWPYVPYNLVAYPYVAQAYDKKAPSGYVRNV 117
                   N  A   +               V
Sbjct: 69  IIRGAGKPNSSAVAILETFQKYTIDQKKDTAV 100

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str} Length = 85

 Score = 54.8 bits (132), Expect = 4e-11
 Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 1/64 (1%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTG 82
            +   V+ M C  C   ++ A+       +V  +     V V G  D   + + + + G
Sbjct: 22 AGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAG 81

Query: 83 KRAE 86
             E
Sbjct: 82 YTPE 85

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A Length = 64

 Score = 53.9 bits (130), Expect = 5e-11
 Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 25 TVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGK 83
          T+++ V  + C+ C   V  AV +     +V+V+    +VT+T  +   ++   + S G 
Sbjct: 2  TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGY 61

Query: 84 RAE 86
            E
Sbjct: 62 EVE 64

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A Length = 66

 Score = 51.5 bits (124), Expect = 5e-10
 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%)

Query: 26 VEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKR 84
          +++KV+ M C+ C   V  A+  + G + VEV+ ++    V G  DP  +++ V   G +
Sbjct: 2  LKLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYK 61

Query: 85 AE 86
          AE
Sbjct: 62 AE 63

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori} Length = 66

 Score = 45.7 bits (109), Expect = 7e-08
 Identities = 9/61 (14%), Positives = 25/61 (40%), Gaps = 3/61 (4%)

Query: 25 TVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT--GHVDPNKVLKKVRST 81
              +V  + C+ C  ++   V  ++G   ++V+ ++  V V        + + + +   
Sbjct: 2  KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDA 61

Query: 82 G 82
          G
Sbjct: 62 G 62

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A Length = 72

 Score = 45.0 bits (107), Expect = 2e-07
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 4/63 (6%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKKVR 79
          QTV + V  M C  C   V+ A+S ++G   V+V  +  +  VT         K+ K   
Sbjct: 3  QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATA 62

Query: 80 STG 82
            G
Sbjct: 63 DAG 65

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149

 Score = 46.2 bits (110), Expect = 2e-07
 Identities = 14/80 (17%), Positives = 25/80 (31%), Gaps = 4/80 (5%)

Query: 11  FEITPRRKRRKPWQTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT--- 66
           FE             +E+ +  M C  C   +   ++   G     V    S+  V    
Sbjct: 67  FEAAVMEDYAGSDGNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDP 126

Query: 67  GHVDPNKVLKKVRSTGKRAE 86
             + P  ++K +   G  A 
Sbjct: 127 EIIGPRDIIKIIEEIGFHAS 146

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149

 Score = 42.7 bits (101), Expect = 5e-06
 Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 4/63 (6%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKKVR 79
          Q   +++K M C  C   +   +    G  SV V     +  +      + P ++ + ++
Sbjct: 4  QKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQ 63

Query: 80 STG 82
            G
Sbjct: 64 DLG 66

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A Length = 75

 Score = 44.6 bits (106), Expect = 3e-07
 Identities = 11/63 (17%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKKVR 79
           +V I V+ M C+ C   +   +  + G   ++V+ ++   T+        P  + + + 
Sbjct: 2  NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID 61

Query: 80 STG 82
            G
Sbjct: 62 DMG 64

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A Length = 79

 Score = 44.3 bits (105), Expect = 3e-07
 Identities = 11/63 (17%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKKVR 79
           +V I V+ M C+ C   +   +  + G   ++V+ ++   T+        P  + + + 
Sbjct: 8  NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID 67

Query: 80 STG 82
            G
Sbjct: 68 DMG 70

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A Length = 71

 Score = 43.9 bits (104), Expect = 4e-07
 Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 3/66 (4%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVN--RKQSRVTVTGHVDPNKVLKKVRS 80
          QT+ ++++ M C  C   +  A++ + G +S +VN   +Q+ V+  G   P  +   V  
Sbjct: 3  QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVER 62

Query: 81 TGKRAE 86
           G  A 
Sbjct: 63 AGYHAR 68

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A Length = 69

 Score = 43.8 bits (104), Expect = 4e-07
 Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 4/63 (6%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKKVR 79
          +   ++V+ M C  C + V  +V  + G  +V VN +  +V V+     V    +   + 
Sbjct: 2  EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIE 61

Query: 80 STG 82
            G
Sbjct: 62 DQG 64

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A Length = 69

 Score = 43.8 bits (104), Expect = 4e-07
 Identities = 14/64 (21%), Positives = 29/64 (45%), Gaps = 3/64 (4%)

Query: 26 VEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVN--RKQSRVTVTGHVDPNKVLKKVRSTG 82
            +K+  M CD C   V+ A+  + G +S  V+  +  +++ +     P+ +   V   G
Sbjct: 2  THLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLG 61

Query: 83 KRAE 86
           +A 
Sbjct: 62 YKAT 65

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP} Length = 71

 Score = 43.8 bits (104), Expect = 4e-07
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 4/65 (6%)

Query: 22 PWQTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKK 77
          P +T +++V  M C  C   +  A+  +KG     V     R+TVT     V    + ++
Sbjct: 1  PLKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQER 60

Query: 78 VRSTG 82
          + + G
Sbjct: 61 IAALG 65

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus} Length = 73

 Score = 43.9 bits (104), Expect = 4e-07
 Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTG 82
          + + +++  + C  C  RV+ A+    GAK  +V+  ++ V      D +K +K V + G
Sbjct: 5  EKIVLELSGLSCHHCVARVKKALEEA-GAKVEKVDLNEAVVAGNK-EDVDKYIKAVEAAG 62

Query: 83 KRAE 86
           +A+
Sbjct: 63 YQAK 66

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202

 Score = 45.8 bits (108), Expect = 7e-07
 Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 4/79 (5%)

Query: 12  EITPRRKRRKPWQTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---G 67
              PR + +    T  I +  M C  C   +   +S ++G + + V+  +   TV     
Sbjct: 110 GSPPRNQVQGTCSTTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPA 169

Query: 68  HVDPNKVLKKVRSTGKRAE 86
            + P ++   +   G  A 
Sbjct: 170 VISPEELRAAIEDMGFEAS 188

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202

 Score = 40.8 bits (95), Expect = 4e-05
 Identities = 9/64 (14%), Positives = 26/64 (40%), Gaps = 4/64 (6%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKKVR 79
           T+++++  M C  C   +   +  + G +S++V+ +     V        P  + + + 
Sbjct: 20 VTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIE 79

Query: 80 STGK 83
          +   
Sbjct: 80 ALPP 83

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis} Length = 71

 Score = 43.0 bits (102), Expect = 8e-07
 Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 4/67 (5%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKKVR 79
          + + ++V+ M C  C   +  +V  + G + V+V   +  V VT     V    ++  + 
Sbjct: 5  EQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIE 64

Query: 80 STGKRAE 86
            G   +
Sbjct: 65 DQGYDVQ 71

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} Length = 74

 Score = 42.3 bits (100), Expect = 2e-06
 Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKKVR 79
          + +++ V  M C  C   V  A+ ++ G     V   Q+R  V      V    + +++ 
Sbjct: 2  RKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIE 61

Query: 80 STG 82
            G
Sbjct: 62 DAG 64

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151

 Score = 43.6 bits (103), Expect = 3e-06
 Identities = 13/63 (20%), Positives = 22/63 (34%), Gaps = 4/63 (6%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKKVR 79
          + + ++V  M C  C  R+   +  M G     VN     V V           + +K+ 
Sbjct: 6  KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE 65

Query: 80 STG 82
            G
Sbjct: 66 KLG 68

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151

 Score = 42.8 bits (101), Expect = 4e-06
 Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 4/67 (5%)

Query: 24  QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKKVR 79
           +  E  ++ M C  C  R+   ++ ++G  +  VN     VTV         + + + V 
Sbjct: 74  EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD 133

Query: 80  STGKRAE 86
             G + +
Sbjct: 134 KLGYKLK 140

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A Length = 72

 Score = 41.5 bits (98), Expect = 3e-06
 Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 4/63 (6%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKKVR 79
          Q   I +  M C+ C + +   +S   G KS+ V+   S  TV        P  +   + 
Sbjct: 3  QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE 62

Query: 80 STG 82
            G
Sbjct: 63 DMG 65

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A Length = 71

 Score = 41.3 bits (97), Expect = 4e-06
 Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTG 82
          +    +V  + C  C  +    V  ++G     VN   S++TVTG     +V +      
Sbjct: 3  EKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEASIQQVEQAGAFEH 62

Query: 83 KRAE 86
           +  
Sbjct: 63 LKII 66

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1 Length = 68

 Score = 40.3 bits (95), Expect = 8e-06
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 4/65 (6%)

Query: 26 VEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKKVRST 81
           E  VK M C+ C  R+  AV  + G K V+V  K+ +  V     +V   ++ + +   
Sbjct: 2  QEFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINEL 61

Query: 82 GKRAE 86
          G +AE
Sbjct: 62 GYQAE 66

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana} Length = 95

 Score = 40.9 bits (96), Expect = 8e-06
 Identities = 14/74 (18%), Positives = 25/74 (33%), Gaps = 4/74 (5%)

Query: 17 RKRRKPWQTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPN 72
          +K+ K  Q     V  + C      + + + S+ G K   V      V V      + P 
Sbjct: 9  KKKVKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPF 68

Query: 73 KVLKKVRSTGKRAE 86
          ++ K +      A 
Sbjct: 69 QIAKALNEARLEAN 82

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A Length = 84

 Score = 40.8 bits (96), Expect = 8e-06
 Identities = 10/63 (15%), Positives = 29/63 (46%), Gaps = 4/63 (6%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKKVR 79
            +++KV+ M C  C   +   +  ++G + ++V+      T+      +   ++ K++ 
Sbjct: 9  VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIE 68

Query: 80 STG 82
          + G
Sbjct: 69 AMG 71

>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima} Length = 67

 Score = 40.2 bits (94), Expect = 1e-05
 Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 25 TVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTG 82
             + V  + C+ C+ R+  A+  + G K+ EV+ ++ +V V    + + VLKK+    
Sbjct: 2  RYVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETE-NLDSVLKKLEEID 58

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B Length = 72

 Score = 39.9 bits (94), Expect = 1e-05
 Identities = 12/66 (18%), Positives = 26/66 (39%), Gaps = 3/66 (4%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT--GHVDPNKVLKKVRS 80
          + V + V  M C  C   +   + ++KG    +++   +   VT    V  + + + +  
Sbjct: 2  REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIED 61

Query: 81 TGKRAE 86
           G   E
Sbjct: 62 CGFDCE 67

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A Length = 90

 Score = 39.4 bits (92), Expect = 3e-05
 Identities = 11/62 (17%), Positives = 23/62 (37%), Gaps = 4/62 (6%)

Query: 25 TVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKKVRS 80
          T    +  M C  C   +   +S+++   S+ V+ +     V      V P  + K + +
Sbjct: 4  TATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEA 63

Query: 81 TG 82
            
Sbjct: 64 VS 65

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A Length = 73

 Score = 38.9 bits (91), Expect = 3e-05
 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVD-PNKVLKKVRST 81
               KV  MDC  C R+V +AV  + G   V+V     ++ V    D   +V   ++  
Sbjct: 3  TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKA 62

Query: 82 G 82
          G
Sbjct: 63 G 63

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A Length = 76

 Score = 38.1 bits (89), Expect = 7e-05
 Identities = 13/63 (20%), Positives = 22/63 (34%), Gaps = 4/63 (6%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKKVR 79
          + + ++V  M C  C  R+   +  M G     VN     V V           + +K+ 
Sbjct: 6  KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE 65

Query: 80 STG 82
            G
Sbjct: 66 KLG 68

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A Length = 77

 Score = 38.1 bits (89), Expect = 7e-05
 Identities = 13/67 (19%), Positives = 23/67 (34%), Gaps = 4/67 (5%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKKVR 79
              I+V  M C  C   +   +   +G  S+ V     +  V      + P  + + +R
Sbjct: 3  SKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIR 62

Query: 80 STGKRAE 86
            G  A 
Sbjct: 63 ELGFGAT 69

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 13/67 (19%), Positives = 25/67 (37%), Gaps = 4/67 (5%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKKVR 79
              ++V  M C  C + +  AV S++G + V VN       +      +D   + + + 
Sbjct: 2  MERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIE 61

Query: 80 STGKRAE 86
            G    
Sbjct: 62 DLGYGVV 68

>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A Length = 80

 Score = 37.3 bits (87), Expect = 1e-04
 Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKKVR 79
          +  E  ++ M C  C  R+   ++ ++G  +  VN     VTV         + + + V 
Sbjct: 3  EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD 62

Query: 80 STG 82
            G
Sbjct: 63 KLG 65

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A Length = 75

 Score = 37.3 bits (87), Expect = 2e-04
 Identities = 10/63 (15%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKKVR 79
            +E+ V+ M C  C  ++  +++  +G     V    ++  +      + P  ++  + 
Sbjct: 4  GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIE 63

Query: 80 STG 82
          S G
Sbjct: 64 SLG 66

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	146
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	99.55
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	99.46
4a4j_A	69	Pacszia, cation-transporting ATPase PACS; hydrolas	99.44
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	99.42
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	99.39
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	99.31
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	99.26
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	99.23
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	99.23
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	99.23
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	99.23
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	99.23
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	99.21
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	99.2
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	99.19
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	99.19
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	99.18
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	99.17
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	99.16
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	99.15
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	99.15
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	99.14
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	99.14
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	99.13
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	99.12
2kkh_A	95	Putative heavy metal transporter; zinc transport,	99.11
1jww_A	80	Potential copper-transporting ATPase; beta-alpha-b	99.09
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	99.09
2ofg_X	111	Zinc-transporting ATPase; ferredoxin-like fold, be	99.08
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	99.07
2kyz_A	67	Heavy metal binding protein; structural genomics,	99.06
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	99.03
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	99.02
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	99.01
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	98.94
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	98.92
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	98.91
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	98.86
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	98.55
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	98.5
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.44
3bpd_A	100	Uncharacterized protein; heptamer, Mg+2 ION, PSI-2	90.17
2x3d_A	96	SSO6206; unknown function; 2.70A {Sulfolobus solfa	89.11
2raq_A	97	Conserved protein MTH889; alpha-beta protein, stru	87.92
1jdq_A	98	TM006 protein, hypothetical protein TM0983; struct	85.94

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A

Probab=99.55  E-value=3.7e-14  Score=86.40  Aligned_cols=67  Identities=19%  Similarity=0.461  Sum_probs=62.3

Q ss_pred             ceEEEEEEcCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHhcCCceEEecc
Q 032167           23 WQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRAEFWPY   90 (146)
Q Consensus        23 ~~~~~l~V~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~l~~~G~~a~~~~~   90 (146)
                      |.+.+|+|||+|.+|+++|+++|.+++|| ++++|+..++++|.+.+++++|.+.|++.||.+.+++.
T Consensus         1 m~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~   67 (68)
T 3iwl_A            1 MPKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGL   67 (68)
T ss_dssp             -CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEEC
T ss_pred             CceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecCC
Confidence            35678888999999999999999999999 99999999999999989999999999999999999874

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0

Probab=99.46  E-value=7.6e-13  Score=81.31  Aligned_cols=68  Identities=22%  Similarity=0.377  Sum_probs=62.7

Q ss_pred             ceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCceEEecc
Q 032167           23 WQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRAEFWPY   90 (146)
Q Consensus        23 ~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a~~~~~   90 (146)
                      |++++|.| ||+|.+|..+|+++|.+++||.++.+|+..++++|..+   ++.++|.+.|++.||.+++++.
T Consensus         1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~   72 (74)
T 3dxs_X            1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILAE   72 (74)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEEE
T ss_pred             CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEccC
Confidence            56789999 99999999999999999999999999999999999854   6899999999999999988763

>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A

Probab=99.44  E-value=1.3e-12  Score=79.16  Aligned_cols=65  Identities=26%  Similarity=0.535  Sum_probs=60.0

Q ss_pred             eEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEE--eeCCHHHHHHHHHhcCCceEEe
Q 032167           24 QTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT--GHVDPNKVLKKVRSTGKRAEFW   88 (146)
Q Consensus        24 ~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~--g~~~~~~i~~~l~~~G~~a~~~   88 (146)
                      ++++|.| ||+|.+|..+|+++|.+++||.++.+|+..++++|.  +..++++|.+.|++.||.++++
T Consensus         2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~   69 (69)
T 4a4j_A            2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL   69 (69)
T ss_dssp             EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEEC
T ss_pred             CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEeC
Confidence            5678999 999999999999999999999999999999999998  4489999999999999998763

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A

Probab=99.42  E-value=2.7e-12  Score=78.76  Aligned_cols=67  Identities=19%  Similarity=0.402  Sum_probs=62.7

Q ss_pred             ceEEEEEEcCcChhhHHHHHHHHhCCC-CceEEEEeccCCEEEEEeeCCHHHHHHHHHhcCCceEEec
Q 032167           23 WQTVEIKVKMDCDGCERRVRHAVSSMK-GAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRAEFWP   89 (146)
Q Consensus        23 ~~~~~l~V~m~C~~C~~kv~k~l~~~~-GV~~v~vd~~~~~v~V~g~~~~~~i~~~l~~~G~~a~~~~   89 (146)
                      +.+++|+|.|+|.+|.++|+++|.+++ ||.++++|+..++++|.+..+.+++.+.|++.||.+.++.
T Consensus         4 m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~   71 (73)
T 1cc8_A            4 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGK   71 (73)
T ss_dssp             CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEEEE
T ss_pred             ceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCceeee
Confidence            567788999999999999999999999 9999999999999999988899999999999999998875

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}

Probab=99.39  E-value=2.2e-12  Score=79.37  Aligned_cols=67  Identities=24%  Similarity=0.432  Sum_probs=62.7

Q ss_pred             CceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHhcCCceEEecc
Q 032167           22 PWQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRAEFWPY   90 (146)
Q Consensus        22 ~~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~l~~~G~~a~~~~~   90 (146)
                      .+.+++|.| ||+|.+|..+|+++|.+ +||..+.+|+..++++|..+ +++.|.+.|++.||.+.+.+.
T Consensus         3 ~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~~~~~~   70 (73)
T 3fry_A            3 SVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQAKLRSS   70 (73)
T ss_dssp             CCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEEEECCS
T ss_pred             ccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCceEecCc
Confidence            467889999 99999999999999999 99999999999999999988 999999999999999988763

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.31  E-value=2.3e-11  Score=79.35  Aligned_cols=71  Identities=25%  Similarity=0.400  Sum_probs=65.2

Q ss_pred             CceEEEEEEcCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHhcCCceEEeccCC
Q 032167           22 PWQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRAEFWPYVP   92 (146)
Q Consensus        22 ~~~~~~l~V~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~l~~~G~~a~~~~~~~   92 (146)
                      .+.+++|+|.|+|..|.++|+++|.+++||.++.+|+..++++|.+.++..+|.+.|+++||.+.++....
T Consensus        17 ~~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~~~~   87 (98)
T 2crl_A           17 TLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGS   87 (98)
T ss_dssp             CCEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEESCC
T ss_pred             cceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEEccCCC
Confidence            35677899999999999999999999999999999999999999988899999999999999999987543

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}

Probab=99.26  E-value=7.3e-11  Score=70.94  Aligned_cols=64  Identities=20%  Similarity=0.418  Sum_probs=58.1

Q ss_pred             CceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCce
Q 032167           22 PWQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRA   85 (146)
Q Consensus        22 ~~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a   85 (146)
                      .+.++.|+| ||+|..|..+|+++|.+++||..+.+++..++++|..+   ++.+.|.+.|++.||.+
T Consensus         3 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   70 (71)
T 2l3m_A            3 AMEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV   70 (71)
T ss_dssp             SEEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred             CcEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence            467788999 99999999999999999999999999999999998743   67889999999999865

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A

Probab=99.23  E-value=1.5e-10  Score=69.36  Aligned_cols=64  Identities=25%  Similarity=0.494  Sum_probs=57.2

Q ss_pred             eEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee--CCHHHHHHHHHhcCCceEE
Q 032167           24 QTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH--VDPNKVLKKVRSTGKRAEF   87 (146)
Q Consensus        24 ~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~--~~~~~i~~~l~~~G~~a~~   87 (146)
                      +++.|.| ||+|..|..+++++|.+++||.++.+|+..++++|..+  .+.+.|.+.|++.||.+.+
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~   69 (71)
T 2xmw_A            3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARV   69 (71)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEEEE
T ss_pred             cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCcee
Confidence            5678999 99999999999999999999999999999999998754  6788899999999998764

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A

Probab=99.23  E-value=2.5e-11  Score=71.38  Aligned_cols=60  Identities=22%  Similarity=0.479  Sum_probs=56.1

Q ss_pred             EEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHhcCCce
Q 032167           26 VEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRA   85 (146)
Q Consensus        26 ~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~l~~~G~~a   85 (146)
                      .+|.| ||+|..|..+++++|.+++||.++.+|+..++++|.+..+...+.+.|++.||.+
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~~~   63 (64)
T 2xmm_A            3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGYEV   63 (64)
T ss_dssp             EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHHHTTCCC
T ss_pred             EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence            47899 9999999999999999999999999999999999987788999999999999865

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A

Probab=99.23  E-value=2.2e-11  Score=72.77  Aligned_cols=62  Identities=31%  Similarity=0.568  Sum_probs=56.8

Q ss_pred             EEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHhcCCceEEe
Q 032167           27 EIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRAEFW   88 (146)
Q Consensus        27 ~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~l~~~G~~a~~~   88 (146)
                      +|.| ||+|..|..+++++|.+++||.++.+|+..++++|.+..+.+.|.+.|++.||.+..+
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~   65 (66)
T 2roe_A            3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEVL   65 (66)
T ss_dssp             CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTCEEEEC
T ss_pred             EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCCCcEec
Confidence            5889 9999999999999999999999999999999999965588999999999999987653

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A

Probab=99.23  E-value=1.2e-10  Score=70.12  Aligned_cols=66  Identities=27%  Similarity=0.395  Sum_probs=59.0

Q ss_pred             ceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCceEEe
Q 032167           23 WQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRAEFW   88 (146)
Q Consensus        23 ~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a~~~   88 (146)
                      ++++.|.| ||+|..|..+|+++|.+++||.++.+|+..++++|..+   .+.+.|.+.|.+.||.+.+.
T Consensus         2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   71 (72)
T 1osd_A            2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK   71 (72)
T ss_dssp             EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred             ceEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEec
Confidence            45678999 99999999999999999999999999999999998754   57889999999999987653

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}

Probab=99.23  E-value=2.2e-11  Score=77.45  Aligned_cols=67  Identities=16%  Similarity=0.273  Sum_probs=58.6

Q ss_pred             CCCCceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHhcCCce
Q 032167           19 RRKPWQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRA   85 (146)
Q Consensus        19 ~~~~~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~l~~~G~~a   85 (146)
                      ....+.+++|.| ||+|..|..+|+++|.+++||.++.+|+..++++|...++.+.|.+.|+++||.+
T Consensus        17 ~~~~~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~Gy~~   84 (85)
T 2k2p_A           17 LYFQGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTP   84 (85)
T ss_dssp             -----CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHHHTTCCC
T ss_pred             ccccccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence            344567788999 9999999999999999999999999999999999988789999999999999864

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A

Probab=99.21  E-value=1.9e-10  Score=69.85  Aligned_cols=66  Identities=24%  Similarity=0.321  Sum_probs=58.4

Q ss_pred             ceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEeeC-CHHHHHHHHHhcCCceEEe
Q 032167           23 WQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHV-DPNKVLKKVRSTGKRAEFW   88 (146)
Q Consensus        23 ~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~~-~~~~i~~~l~~~G~~a~~~   88 (146)
                      |.++.|.| ||+|..|..+|+++|.+++||.++.+|+..++++|..+. ..+.|.+.|.+.||.+...
T Consensus         2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~~~~~   69 (73)
T 1mwy_A            2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDE   69 (73)
T ss_dssp             CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCEEEEC
T ss_pred             CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCccccc
Confidence            67789999 999999999999999999999999999999999998652 3677888999999987643

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A

Probab=99.20  E-value=2.9e-10  Score=69.15  Aligned_cols=66  Identities=18%  Similarity=0.407  Sum_probs=59.5

Q ss_pred             eEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCceEEec
Q 032167           24 QTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRAEFWP   89 (146)
Q Consensus        24 ~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a~~~~   89 (146)
                      .+++|.| +|+|..|..+|+++|.+++||.++.+++..++++|..+   .+.+.|.+.|++.||.+.+..
T Consensus         2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   71 (75)
T 3cjk_B            2 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN   71 (75)
T ss_dssp             EEEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEEE
T ss_pred             cEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEeec
Confidence            4568999 99999999999999999999999999999999999754   578899999999999887765

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A

Probab=99.19  E-value=1.4e-10  Score=72.77  Aligned_cols=68  Identities=16%  Similarity=0.339  Sum_probs=61.3

Q ss_pred             ceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCceEEecc
Q 032167           23 WQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRAEFWPY   90 (146)
Q Consensus        23 ~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a~~~~~   90 (146)
                      ..+++|.| ||+|..|..+|+++|.+++||..+.+|+..++++|..+   ++...|.+.|++.||.+.+...
T Consensus         8 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~   79 (84)
T 1q8l_A            8 EVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQ   79 (84)
T ss_dssp             CEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCC
T ss_pred             ceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecCC
Confidence            46788999 99999999999999999999999999999999999854   5788999999999998877663

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A

Probab=99.19  E-value=1.7e-10  Score=70.94  Aligned_cols=68  Identities=18%  Similarity=0.375  Sum_probs=61.1

Q ss_pred             CceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCceEEec
Q 032167           22 PWQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRAEFWP   89 (146)
Q Consensus        22 ~~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a~~~~   89 (146)
                      .+.+++|.| ||+|..|..+|+++|.+++||.++.+++..++++|..+   .+.+.+.+.|++.||.+.+.+
T Consensus         6 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   77 (79)
T 1kvi_A            6 GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN   77 (79)
T ss_dssp             TCEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEECC
T ss_pred             CcEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEecC
Confidence            467789999 99999999999999999999999999999999999754   577889999999999887654

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A

Probab=99.18  E-value=1.8e-10  Score=69.26  Aligned_cols=65  Identities=25%  Similarity=0.393  Sum_probs=58.3

Q ss_pred             eEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCceEEe
Q 032167           24 QTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRAEFW   88 (146)
Q Consensus        24 ~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a~~~   88 (146)
                      ++..|.| ||+|..|..+++++|.+++||.++.+++..++++|..+   .+.+.+.+.|++.||.+.+.
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   71 (72)
T 1aw0_A            3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS   71 (72)
T ss_dssp             EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred             eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEeC
Confidence            4568999 99999999999999999999999999999999999854   57888999999999987653

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A

Probab=99.17  E-value=3.5e-10  Score=66.77  Aligned_cols=63  Identities=22%  Similarity=0.440  Sum_probs=56.4

Q ss_pred             ceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCce
Q 032167           23 WQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRA   85 (146)
Q Consensus        23 ~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a   85 (146)
                      |.+.+|.| ||+|..|..+++++|..++||.++.+++..+++.|..+   .+.+.+.+.|++.||.+
T Consensus         1 m~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   67 (69)
T 2qif_A            1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV   67 (69)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred             CeEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence            34668999 99999999999999999999999999999999998753   57888999999999865

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A

Probab=99.16  E-value=2e-10  Score=73.33  Aligned_cols=67  Identities=18%  Similarity=0.299  Sum_probs=59.6

Q ss_pred             eEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhc---CCceEEecc
Q 032167           24 QTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRST---GKRAEFWPY   90 (146)
Q Consensus        24 ~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~---G~~a~~~~~   90 (146)
                      .+++|.| ||+|..|+++|+++|.+++||.++.+|+..++++|..+   ++.+.|.+.|.+.   ||.+.++..
T Consensus         3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~   76 (90)
T 2g9o_A            3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSE   76 (90)
T ss_dssp             EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCC
T ss_pred             cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCC
Confidence            4568999 99999999999999999999999999999999999753   5788899999999   588877764

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A

Probab=99.15  E-value=3.9e-10  Score=68.26  Aligned_cols=67  Identities=19%  Similarity=0.364  Sum_probs=59.7

Q ss_pred             CceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCceEEe
Q 032167           22 PWQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRAEFW   88 (146)
Q Consensus        22 ~~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a~~~   88 (146)
                      .+.+..|+| ||+|..|..+++++|..++||.++.+++..+++.|..+   .+.+.+.+.+.+.||.+.++
T Consensus         4 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   74 (76)
T 1opz_A            4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVIE   74 (76)
T ss_dssp             CCEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEECC
T ss_pred             cceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceecC
Confidence            367788999 99999999999999999999999999999999998743   57888999999999987654

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A

Probab=99.15  E-value=1.3e-10  Score=71.23  Aligned_cols=67  Identities=19%  Similarity=0.295  Sum_probs=60.6

Q ss_pred             ceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCceEEec
Q 032167           23 WQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRAEFWP   89 (146)
Q Consensus        23 ~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a~~~~   89 (146)
                      |+++.|.| ||+|..|..+|+++|.+++||..+.+++..++++|..+   ++...|.+.|.+.||.+.++.
T Consensus         2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   72 (77)
T 1y3j_A            2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIE   72 (77)
T ss_dssp             CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEES
T ss_pred             CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEECC
Confidence            56788999 99999999999999999999999999999999998754   578889999999999887764

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B

Probab=99.14  E-value=3.9e-10  Score=67.74  Aligned_cols=65  Identities=18%  Similarity=0.384  Sum_probs=58.9

Q ss_pred             EEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee--CCHHHHHHHHHhcCCceEEec
Q 032167           25 TVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH--VDPNKVLKKVRSTGKRAEFWP   89 (146)
Q Consensus        25 ~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~--~~~~~i~~~l~~~G~~a~~~~   89 (146)
                      ++.|.| ||+|..|..+++++|.+++||.++.+++..++++|..+  .+.+.+.+.|++.||.+.++.
T Consensus         3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~   70 (72)
T 1fvq_A            3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR   70 (72)
T ss_dssp             EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEE
T ss_pred             EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEcc
Confidence            467999 99999999999999999999999999999999998754  678889999999999988765

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1

Probab=99.14  E-value=3.5e-10  Score=67.09  Aligned_cols=61  Identities=30%  Similarity=0.529  Sum_probs=55.8

Q ss_pred             EEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCceEE
Q 032167           27 EIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRAEF   87 (146)
Q Consensus        27 ~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a~~   87 (146)
                      +|.| ||+|..|..+++++|.+++||.++.+++..++++|..+   .+.+.+.+.+++.||.+++
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   67 (68)
T 1cpz_A            3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEV   67 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred             EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCccc
Confidence            5889 99999999999999999999999999999999999854   5788999999999998765

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A

Probab=99.13  E-value=2.5e-10  Score=68.28  Aligned_cols=62  Identities=23%  Similarity=0.428  Sum_probs=56.0

Q ss_pred             EEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee--CCHHHHHHHHHhcCCceEEe
Q 032167           27 EIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH--VDPNKVLKKVRSTGKRAEFW   88 (146)
Q Consensus        27 ~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~--~~~~~i~~~l~~~G~~a~~~   88 (146)
                      +|.| ||+|..|..+|+++|.+++||.++.+|+..++++|..+  .+.+.|.+.|++.||.+.+.
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~   67 (69)
T 2kt2_A            3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKATLA   67 (69)
T ss_dssp             CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEEECC
T ss_pred             EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCceEeC
Confidence            5889 99999999999999999999999999999999998754  57889999999999987653

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}

Probab=99.12  E-value=3.6e-10  Score=66.65  Aligned_cols=61  Identities=15%  Similarity=0.384  Sum_probs=54.9

Q ss_pred             EEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee--CCHHHHHHHHHhcCCce
Q 032167           25 TVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH--VDPNKVLKKVRSTGKRA   85 (146)
Q Consensus        25 ~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~--~~~~~i~~~l~~~G~~a   85 (146)
                      +.+|.| ||+|..|..+++++|.+++||..+.+++..++++|..+  .+.+.|.+.|++.||.+
T Consensus         2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~   65 (66)
T 1yg0_A            2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQEV   65 (66)
T ss_dssp             EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHTCCC
T ss_pred             eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCCc
Confidence            457899 99999999999999999999999999999999999854  57788999999999864

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}

Probab=99.11  E-value=1.1e-09  Score=70.19  Aligned_cols=71  Identities=18%  Similarity=0.195  Sum_probs=63.1

Q ss_pred             CCceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCceEEeccC
Q 032167           21 KPWQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRAEFWPYV   91 (146)
Q Consensus        21 ~~~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a~~~~~~   91 (146)
                      ..+.++.|.| ||+|..|..+|+++|..++||..+.+++..+++.|..+   ++...|.+.|...||.+.+...+
T Consensus        13 ~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~   87 (95)
T 2kkh_A           13 KKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRVNG   87 (95)
T ss_dssp             SCSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCCC
T ss_pred             cceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEecCC
Confidence            3577889999 99999999999999999999999999999999998854   47888999999999998876643

>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A

Probab=99.09  E-value=6.1e-10  Score=68.33  Aligned_cols=67  Identities=19%  Similarity=0.349  Sum_probs=59.9

Q ss_pred             ceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCceEEec
Q 032167           23 WQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRAEFWP   89 (146)
Q Consensus        23 ~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a~~~~   89 (146)
                      |.+..|.| ||+|..|..+++++|.+++||..+.+|+..+++.|..+   .+...+.+.+.+.||.+.++.
T Consensus         2 m~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~   72 (80)
T 1jww_A            2 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKG   72 (80)
T ss_dssp             CEEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECC
T ss_pred             ceEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecC
Confidence            45678999 99999999999999999999999999999999998753   578889999999999887765

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}

Probab=99.09  E-value=5.4e-10  Score=66.51  Aligned_cols=64  Identities=23%  Similarity=0.430  Sum_probs=57.0

Q ss_pred             ceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCceE
Q 032167           23 WQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRAE   86 (146)
Q Consensus        23 ~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a~   86 (146)
                      +.+.+|.| ||+|.+|..+++++|.+++||..+.+++..++++|..+   .+.+.+.+.+.+.||.+.
T Consensus         2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~   69 (71)
T 2ldi_A            2 LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLA   69 (71)
T ss_dssp             CEEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEEE
T ss_pred             cEEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence            45678999 99999999999999999999999999999999998753   567889999999998764

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A

Probab=99.07  E-value=6.7e-10  Score=67.20  Aligned_cols=65  Identities=15%  Similarity=0.399  Sum_probs=57.3

Q ss_pred             eEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCceEEe
Q 032167           24 QTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRAEFW   88 (146)
Q Consensus        24 ~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a~~~   88 (146)
                      .++.|.| ||+|..|..+++++|.+++||.++.+|+..++++|..+   .+...+.+.+.+.||.+.+.
T Consensus         4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   72 (75)
T 1yjr_A            4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSLV   72 (75)
T ss_dssp             CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEES
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCceee
Confidence            3467999 99999999999999999999999999999999999854   45678899999999987654

>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}

Probab=99.06  E-value=3e-10  Score=67.93  Aligned_cols=60  Identities=27%  Similarity=0.448  Sum_probs=54.1

Q ss_pred             EEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHhcCCceEE
Q 032167           26 VEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRAEF   87 (146)
Q Consensus        26 ~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~l~~~G~~a~~   87 (146)
                      .+|.| ||+|.+|..+|+++|.++ ||.++.+|+..++++|..+.+ ..+.+.|++.||.+..
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~Gy~~~~   63 (67)
T 2kyz_A            3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLEEIDYPVES   63 (67)
T ss_dssp             EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTTCCCCB
T ss_pred             EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcCCceee
Confidence            57999 999999999999999999 999999999999999987644 8899999999987654

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=99.03  E-value=1.8e-09  Score=80.29  Aligned_cols=70  Identities=19%  Similarity=0.386  Sum_probs=63.9

Q ss_pred             eEEEEEEcCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHhcCCceEEeccCCC
Q 032167           24 QTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRAEFWPYVPY   93 (146)
Q Consensus        24 ~~~~l~V~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~l~~~G~~a~~~~~~~~   93 (146)
                      .+++|+|.|+|..|+++|+++|.+++||.++++|+..++++|.+..++++|.+.|+++||.+.++.....
T Consensus         6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~~~~   75 (222)
T 1qup_A            6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKP   75 (222)
T ss_dssp             EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEECCSCT
T ss_pred             eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCccccccCCCc
Confidence            4567888899999999999999999999999999999999999888999999999999999998876544

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=99.02  E-value=1.4e-09  Score=74.58  Aligned_cols=65  Identities=18%  Similarity=0.399  Sum_probs=59.1

Q ss_pred             eEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCceEEe
Q 032167           24 QTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRAEFW   88 (146)
Q Consensus        24 ~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a~~~   88 (146)
                      .++.|+| ||+|..|.++|+++|.+++||.++.+|+..++++|..+   ++.++|.+.|++.||.+.+.
T Consensus        80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~  148 (149)
T 2ew9_A           80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASLA  148 (149)
T ss_dssp             SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEECC
T ss_pred             ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEec
Confidence            5678999 99999999999999999999999999999999999854   57899999999999987653

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=99.01  E-value=1.8e-09  Score=74.31  Aligned_cols=68  Identities=19%  Similarity=0.331  Sum_probs=61.5

Q ss_pred             ceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCceEEecc
Q 032167           23 WQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRAEFWPY   90 (146)
Q Consensus        23 ~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a~~~~~   90 (146)
                      ..++.|.| ||+|..|.++|+++|.+++||.++.+|+..++++|..+   ++.++|.+.|++.||.+.++..
T Consensus        73 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~  144 (151)
T 1p6t_A           73 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGE  144 (151)
T ss_dssp             CEEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCS
T ss_pred             ccccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcCc
Confidence            45678999 99999999999999999999999999999999999853   6889999999999999887653

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A

Probab=98.94  E-value=2.3e-09  Score=64.60  Aligned_cols=61  Identities=23%  Similarity=0.463  Sum_probs=51.8

Q ss_pred             eEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHhcCCceEEe
Q 032167           24 QTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRAEFW   88 (146)
Q Consensus        24 ~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~l~~~G~~a~~~   88 (146)
                      .+.+|.| ||+|..|..+|+++|.+++||.++.+|+..++++|.+...    .+.|+++||.+.+.
T Consensus         3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~~~Gy~~~~~   64 (71)
T 2aj0_A            3 EKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVEQAGAFEHLK   64 (71)
T ss_dssp             CEEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHHHHHTTTTCE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHHHhCCCcccc
Confidence            3568999 9999999999999999999999999999999999987654    45667888765443

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=98.92  E-value=6.3e-09  Score=78.65  Aligned_cols=71  Identities=18%  Similarity=0.364  Sum_probs=64.3

Q ss_pred             ceEEEEEEcCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHhcCCceEEeccCCC
Q 032167           23 WQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRAEFWPYVPY   93 (146)
Q Consensus        23 ~~~~~l~V~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~l~~~G~~a~~~~~~~~   93 (146)
                      ..+++|+|.|+|..|+.+|+++|.+++||.++++|+..++++|.+..++++|.+.|+++||.+.++.....
T Consensus         6 ~~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~~~~   76 (249)
T 1jk9_B            6 TYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKP   76 (249)
T ss_dssp             CEEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCCEEEEESST
T ss_pred             ceeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCcccccCCcc
Confidence            34567888899999999999999999999999999999999999888999999999999999988876544

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=98.91  E-value=9.3e-09  Score=74.58  Aligned_cols=67  Identities=19%  Similarity=0.382  Sum_probs=60.0

Q ss_pred             eEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCceEEecc
Q 032167           24 QTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRAEFWPY   90 (146)
Q Consensus        24 ~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a~~~~~   90 (146)
                      .++.|+| ||+|..|+.+|+++|.+++||..+.+++..++++|..+   ++.+.|.+.|++.||.+.++..
T Consensus       122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~  192 (202)
T 2rop_A          122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVSE  192 (202)
T ss_dssp             EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC--
T ss_pred             eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcCC
Confidence            5688999 99999999999999999999999999999999999753   6789999999999999887653

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=98.86  E-value=1.6e-08  Score=69.12  Aligned_cols=67  Identities=16%  Similarity=0.286  Sum_probs=60.1

Q ss_pred             ceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCceEEec
Q 032167           23 WQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRAEFWP   89 (146)
Q Consensus        23 ~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a~~~~   89 (146)
                      |++++|.| ||+|.+|..+++++|.+++||..+.+++..+++.|..+   .+...+.+.+++.||.+.+..
T Consensus         3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~   73 (149)
T 2ew9_A            3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVME   73 (149)
T ss_dssp             CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECS
T ss_pred             cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEeec
Confidence            67889999 99999999999999999999999999999999998753   577889999999999887643

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=98.55  E-value=5.2e-07  Score=61.76  Aligned_cols=63  Identities=21%  Similarity=0.417  Sum_probs=55.4

Q ss_pred             ceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCce
Q 032167           23 WQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRA   85 (146)
Q Consensus        23 ~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a   85 (146)
                      +.+..|.| ||+|.+|..+++++|.+++||..+.+++..+++.+...   .+...+.+.+++.|+.+
T Consensus         5 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   71 (151)
T 1p6t_A            5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV   71 (151)
T ss_dssp             CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred             ceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCcc
Confidence            45677999 99999999999999999999999999999999888643   57788888999999864

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=98.50  E-value=3.3e-07  Score=66.32  Aligned_cols=61  Identities=15%  Similarity=0.383  Sum_probs=53.6

Q ss_pred             CceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcC
Q 032167           22 PWQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTG   82 (146)
Q Consensus        22 ~~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G   82 (146)
                      .+.+++|.| ||+|.+|+++|+++|.+++||..+.+++..++++|..+   ++...+.+.|++.+
T Consensus        18 ~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~~   82 (202)
T 2rop_A           18 HVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALP   82 (202)
T ss_dssp             --CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTSS
T ss_pred             ccEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHhc
Confidence            356788999 99999999999999999999999999999999999754   57788999998883

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.44  E-value=6.2e-07  Score=76.74  Aligned_cols=64  Identities=20%  Similarity=0.318  Sum_probs=58.1

Q ss_pred             EEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCceEEe
Q 032167           25 TVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRAEFW   88 (146)
Q Consensus        25 ~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a~~~   88 (146)
                      +++++| ||+|.+|.++|+++|.+++||.++++|+.+++++|..+   .+.+++.+.+++.||.+...
T Consensus         3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~~~   70 (723)
T 3j09_A            3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVVDE   70 (723)
T ss_dssp             CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEESSC
T ss_pred             eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCccccc
Confidence            357999 99999999999999999999999999999999999853   68999999999999987543

>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1

Probab=90.17  E-value=0.78  Score=29.29  Aligned_cols=65  Identities=12%  Similarity=0.180  Sum_probs=46.3

Q ss_pred             ceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEec-----cCC--EEEEEee-CCHHHHHHHHHhcCCceEEe
Q 032167           23 WQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNR-----KQS--RVTVTGH-VDPNKVLKKVRSTGKRAEFW   88 (146)
Q Consensus        23 ~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~-----~~~--~v~V~g~-~~~~~i~~~l~~~G~~a~~~   88 (146)
                      .+++.|.| ..+-+.- -.+-+.|..++||..|++..     ...  +++|.|. ++.++|.+.|++.|...-.+
T Consensus         6 iRRlVLDVlKPh~P~i-vdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~GgvIHSI   79 (100)
T 3bpd_A            6 LRRLVLDVLKPHEPKT-IVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVIHSV   79 (100)
T ss_dssp             EEEEEEEEEEESCSCH-HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEEEEE
T ss_pred             ceEEEEEecCCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEee
Confidence            56777777 4444443 45667799999999888753     223  3456676 99999999999999765444

>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}

Probab=89.11  E-value=1.1  Score=28.40  Aligned_cols=65  Identities=11%  Similarity=0.223  Sum_probs=45.3

Q ss_pred             ceEEEEEE--cCcChhhHHHHHHHHhCCCCceEEEEec-----cCC--EEEEEee-CCHHHHHHHHHhcCCceEEe
Q 032167           23 WQTVEIKV--KMDCDGCERRVRHAVSSMKGAKSVEVNR-----KQS--RVTVTGH-VDPNKVLKKVRSTGKRAEFW   88 (146)
Q Consensus        23 ~~~~~l~V--~m~C~~C~~kv~k~l~~~~GV~~v~vd~-----~~~--~v~V~g~-~~~~~i~~~l~~~G~~a~~~   88 (146)
                      .+++.|.|  .++-+.-. .+-+.|+.++||..+++..     ...  +++|.|. ++.+.+.+.|++.|......
T Consensus         4 irRlVLDVlKP~h~P~iv-d~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg~IHSI   78 (96)
T 2x3d_A            4 IRRLVLDVLKPIRGTSIV-DLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGCAIHSI   78 (96)
T ss_dssp             EEEEEEEEEEESSSSCHH-HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTCEEEEE
T ss_pred             eEEEEEEcccCCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEee
Confidence            45666766  33444443 5566789999999888753     223  3456677 99999999999999765443

>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1

Probab=87.92  E-value=1.2  Score=28.40  Aligned_cols=65  Identities=15%  Similarity=0.251  Sum_probs=46.2

Q ss_pred             ceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEec-----cCCE--EEEEee-CCHHHHHHHHHhcCCceEEe
Q 032167           23 WQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNR-----KQSR--VTVTGH-VDPNKVLKKVRSTGKRAEFW   88 (146)
Q Consensus        23 ~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~-----~~~~--v~V~g~-~~~~~i~~~l~~~G~~a~~~   88 (146)
                      .+++.|.| ..+-+.- -.+-+.|..++||..+++..     ....  ++|.|. ++.+.|.+.|++.|......
T Consensus         6 irRlVLDVlKPh~p~i-~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg~IHSI   79 (97)
T 2raq_A            6 LIRIVLDILKPHEPII-PEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSIHSV   79 (97)
T ss_dssp             EEEEEEEEECCSCSCH-HHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEEEEE
T ss_pred             ceEEEEEecCCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEee
Confidence            56777887 4444444 45566788999998887753     3333  456676 99999999999999765443

>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3

Probab=85.94  E-value=4.8  Score=25.41  Aligned_cols=55  Identities=15%  Similarity=0.148  Sum_probs=41.5

Q ss_pred             EEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee--CCHHHHHHHHHhcCCceEEec
Q 032167           26 VEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH--VDPNKVLKKVRSTGKRAEFWP   89 (146)
Q Consensus        26 ~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~--~~~~~i~~~l~~~G~~a~~~~   89 (146)
                      .++.. |+.|+.-.-+++++|..++.         .+.+.|..+  .....|.+-+++.|+......
T Consensus        27 ~~LD~rGl~CP~Pvl~tkkaL~~l~~---------Ge~L~Vl~dd~~a~~dI~~~~~~~G~~v~~~e   84 (98)
T 1jdq_A           27 KTLDVRGEVCPVPDVETKRALQNMKP---------GEILEVWIDYPMSKERIPETVKKLGHEVLEIE   84 (98)
T ss_dssp             EEEECSSCCSSHHHHHHHHHHHTCCT---------TCEEEEEESSCTHHHHHHHHHHHSSCCEEEEE
T ss_pred             EEEeCCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence            56888 99999999999999998732         234455443  345778888899999876654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	146
d1cc8a_	72	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	3e-16
d1qupa2	72	d.58.17.1 (A:2-73) Copper chaperone for superoxide	4e-16
d1fe0a_	66	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	7e-16
d1sb6a_	64	d.58.17.1 (A:) Copper chaperone {Synechocystis sp.	2e-13
d1osda_	72	d.58.17.1 (A:) Mercuric ion binding protein MerP {	2e-13
d2ggpb1	72	d.58.17.1 (B:1-72) Copper transporter domain ccc2a	4e-12
d1kvja_	79	d.58.17.1 (A:) Menkes copper-transporting ATPase {	4e-11
d2aw0a_	72	d.58.17.1 (A:) Menkes copper-transporting ATPase {	4e-11
d1p6ta2	79	d.58.17.1 (A:73-151) Potential copper-translocatin	8e-11
d1cpza_	68	d.58.17.1 (A:) Copper chaperone {Enterococcus hira	2e-10
d1mwza_	73	d.58.17.1 (A:) Metal ion-transporting ATPase ZntA,	2e-10
d1p6ta1	72	d.58.17.1 (A:1-72) Potential copper-translocating	2e-10
d2qifa1	69	d.58.17.1 (A:1-69) Copper chaperone {Bacillus subt	1e-09
d1q8la_	84	d.58.17.1 (A:) Menkes copper-transporting ATPase {	1e-07

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 66.7 bits (163), Expect = 3e-16
 Identities = 13/63 (20%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 24 QTVEIKVKMDCDGCERRVRHAVSSMK-GAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTG 82
          +  +  V M C GC   V   ++ ++     ++++ ++  V V   +  + +L+K++ TG
Sbjct: 4  KHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTG 63

Query: 83 KRA 85
          K  
Sbjct: 64 KEV 66

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 66.0 bits (161), Expect = 4e-16
 Identities = 13/69 (18%), Positives = 32/69 (46%), Gaps = 1/69 (1%)

Query: 20 RKPWQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVR 79
             ++     + M C+ C   ++  + ++ G  S+  + +Q  ++V   V P+ ++  +R
Sbjct: 3  NDTYEAT-YAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLR 61

Query: 80 STGKRAEFW 88
          + GK A   
Sbjct: 62 NCGKDAIIR 70

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Length = 66

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

 Score = 65.2 bits (159), Expect = 7e-16
 Identities = 13/63 (20%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 26 VEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRA 85
           E  V M C GC   V   ++ + G    +++    +V +      + +L  ++ TGK  
Sbjct: 3  HEFSVDMTCGGCAEAVSRVLNKLGG-VKYDIDLPNKKVCIESEHSMDTLLATLKKTGKTV 61

Query: 86 EFW 88
           + 
Sbjct: 62 SYL 64

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Length = 64

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

 Score = 59.2 bits (143), Expect = 2e-13
 Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 25 TVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGK 83
          T+++ V  + C+ C   V  AV +     +V+V+    +VT+T  +   ++   + S G 
Sbjct: 2  TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGH 61

Query: 84 RAE 86
            E
Sbjct: 62 EVE 64

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

 Score = 59.0 bits (143), Expect = 2e-13
 Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 4/67 (5%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKKVR 79
          QTV + V  M C  C   V+ A+S ++G   V+V  +  +  VT         K+ K   
Sbjct: 3  QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATA 62

Query: 80 STGKRAE 86
            G  + 
Sbjct: 63 DAGYPSS 69

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 55.9 bits (135), Expect = 4e-12
 Identities = 12/66 (18%), Positives = 26/66 (39%), Gaps = 3/66 (4%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT--GHVDPNKVLKKVRS 80
          + V + V  M C  C   +   + ++KG    +++   +   VT    V  + + + +  
Sbjct: 2  REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIED 61

Query: 81 TGKRAE 86
           G   E
Sbjct: 62 CGFDCE 67

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (129), Expect = 4e-11
 Identities = 12/67 (17%), Positives = 27/67 (40%), Gaps = 4/67 (5%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKKVR 79
           +V I V+ M C+ C   +   +  + G   ++V+ ++   T+        P  + + + 
Sbjct: 8  NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID 67

Query: 80 STGKRAE 86
            G  A 
Sbjct: 68 DMGFDAV 74

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (128), Expect = 4e-11
 Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 4/67 (5%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKKVR 79
          Q   I +  M C+ C + +   +S   G KS+ V+   S  TV        P  +   + 
Sbjct: 3  QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE 62

Query: 80 STGKRAE 86
            G  A 
Sbjct: 63 DMGFDAT 69

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 52.6 bits (126), Expect = 8e-11
 Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 4/67 (5%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKKVR 79
          +  E  ++ M C  C  R+   ++ ++G  +  VN     VTV         + + + V 
Sbjct: 2  EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD 61

Query: 80 STGKRAE 86
            G + +
Sbjct: 62 KLGYKLK 68

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Length = 68

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

 Score = 51.3 bits (123), Expect = 2e-10
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 4/64 (6%)

Query: 27 EIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKKVRSTG 82
          E  VK M C+ C  R+  AV  + G K V+V  K+ +  V     +V   ++ + +   G
Sbjct: 3  EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELG 62

Query: 83 KRAE 86
           +AE
Sbjct: 63 YQAE 66

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 73

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

 Score = 51.3 bits (123), Expect = 2e-10
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVD-PNKVLKKVRST 81
               KV  MDC  C R+V +AV  + G   V+V     ++ V    D   +V   ++  
Sbjct: 3  TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKA 62

Query: 82 GKRAE 86
          G    
Sbjct: 63 GYSLR 67

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 51.3 bits (123), Expect = 2e-10
 Identities = 13/63 (20%), Positives = 22/63 (34%), Gaps = 4/63 (6%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKKVR 79
          + + ++V  M C  C  R+   +  M G     VN     V V           + +K+ 
Sbjct: 6  KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE 65

Query: 80 STG 82
            G
Sbjct: 66 KLG 68

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Length = 69

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

 Score = 49.4 bits (118), Expect = 1e-09
 Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 4/63 (6%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVT---GHVDPNKVLKKVR 79
          +   ++V+ M C  C + V  +V  + G  +V VN +  +V V+     V    +   + 
Sbjct: 2  EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIE 61

Query: 80 STG 82
            G
Sbjct: 62 DQG 64

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 84

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (105), Expect = 1e-07
 Identities = 11/67 (16%), Positives = 30/67 (44%), Gaps = 4/67 (5%)

Query: 24 QTVEIKVK-MDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVR 79
            +++KV+ M C  C   +   +  ++G + ++V+      T+      +   ++ K++ 
Sbjct: 9  VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIE 68

Query: 80 STGKRAE 86
          + G  A 
Sbjct: 69 AMGFPAF 75

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	146
d1fe0a_	66	ATX1 metallochaperone protein (ATOX1) {Human (Homo	99.68
d1qupa2	72	Copper chaperone for superoxide dismutase, N-termi	99.67
d1cc8a_	72	ATX1 metallochaperone protein (ATOX1) {Baker's yea	99.65
d2ggpb1	72	Copper transporter domain ccc2a {Baker's yeast (Sa	99.57
d1sb6a_	64	Copper chaperone {Synechocystis sp. pcc 6803, Scat	99.56
d2qifa1	69	Copper chaperone {Bacillus subtilis, CopZ [TaxId:	99.55
d1osda_	72	Mercuric ion binding protein MerP {Ralstonia metal	99.55
d1cpza_	68	Copper chaperone {Enterococcus hirae [TaxId: 1354]	99.54
d1kvja_	79	Menkes copper-transporting ATPase {Human (Homo sap	99.54
d2aw0a_	72	Menkes copper-transporting ATPase {Human (Homo sap	99.53
d1q8la_	84	Menkes copper-transporting ATPase {Human (Homo sap	99.49
d1p6ta1	72	Potential copper-translocating P-type ATPase CopA	99.47
d1p6ta2	79	Potential copper-translocating P-type ATPase CopA	99.47
d1mwza_	73	Metal ion-transporting ATPase ZntA, N-terminal dom	99.45
d3bpda1	91	Uncharacterized protein AF1549 {Archaeoglobus fulg	91.61
d2raqa1	93	Uncharacterized protein MTH889 {Methanobacterium t	90.05
d1je3a_	97	hypothetical protein YedF (EC005) {Escherichia col	82.14
d1dcja_	81	SirA {Escherichia coli [TaxId: 562]}	80.67
d1jdqa_	98	Hypothetical protein TM0983 {Thermotoga maritima [	80.3

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

Probab=99.68  E-value=1.4e-16  Score=96.05  Aligned_cols=64  Identities=20%  Similarity=0.489  Sum_probs=61.2

Q ss_pred             EEEEEEcCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHhcCCceEEec
Q 032167           25 TVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRAEFWP   89 (146)
Q Consensus        25 ~~~l~V~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~l~~~G~~a~~~~   89 (146)
                      +.+|+|+|+|.+|+.+|+++|++++|+ ++++|+.+++++|.++++++.|+++|+++||+|++++
T Consensus         2 k~ef~V~M~C~~C~~~I~~aL~~~~gv-~v~v~~~~~~v~V~~~~~~~~i~~~I~~~Gy~a~lig   65 (66)
T d1fe0a_           2 KHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLG   65 (66)
T ss_dssp             EEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEE
T ss_pred             CEEEEEccCchHHHHHHHHHHhcCCCc-EEEEEcCCCEEEEEeeCCHHHHHHHHHHhCCeEEEee
Confidence            468999999999999999999999998 6999999999999999999999999999999999986

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.67  E-value=2.3e-16  Score=96.69  Aligned_cols=67  Identities=19%  Similarity=0.431  Sum_probs=63.5

Q ss_pred             ceEEEEEEcCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHhcCCceEEec
Q 032167           23 WQTVEIKVKMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRAEFWP   89 (146)
Q Consensus        23 ~~~~~l~V~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~l~~~G~~a~~~~   89 (146)
                      ..+++|+|+|+|++|+++|+++|.+++||.++.+|+..++++|.+.+++++|+++|+++||+|.+++
T Consensus         5 ~~~~~f~V~M~C~~C~~~Iek~l~~~~gV~~v~vdl~~~~v~V~~~~~~~~i~~~I~~~G~~A~l~g   71 (72)
T d1qupa2           5 TYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRG   71 (72)
T ss_dssp             CEEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEEC
T ss_pred             cEEEEEEEccCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEeeCCHHHHHHHHHHhCCCEEEec
Confidence            3467899999999999999999999999999999999999999999999999999999999999875

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.65  E-value=7.2e-16  Score=94.42  Aligned_cols=66  Identities=20%  Similarity=0.420  Sum_probs=62.4

Q ss_pred             CceEEEEEEcCcChhhHHHHHHHHhCC-CCceEEEEeccCCEEEEEeeCCHHHHHHHHHhcCCceEE
Q 032167           22 PWQTVEIKVKMDCDGCERRVRHAVSSM-KGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRAEF   87 (146)
Q Consensus        22 ~~~~~~l~V~m~C~~C~~kv~k~l~~~-~GV~~v~vd~~~~~v~V~g~~~~~~i~~~l~~~G~~a~~   87 (146)
                      ++++++|+|+|+|.+|+++|+++|.++ +||.++++|+.+++++|.+.+++++|.++|+++||++.-
T Consensus         2 ~~kt~~f~V~MtC~~C~~~Ie~~L~~l~~gV~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~   68 (72)
T d1cc8a_           2 EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRS   68 (72)
T ss_dssp             CCEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEE
T ss_pred             CcEEEEEEECcCcHHHHHHHHHHHHcCcCceEEEEEECCCCEEEEeecCCHHHHHHHHHHHCCccCC
Confidence            578999999999999999999999999 499999999999999999999999999999999998863

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.57  E-value=6e-15  Score=90.19  Aligned_cols=66  Identities=18%  Similarity=0.386  Sum_probs=61.8

Q ss_pred             eEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee--CCHHHHHHHHHhcCCceEEec
Q 032167           24 QTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH--VDPNKVLKKVRSTGKRAEFWP   89 (146)
Q Consensus        24 ~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~--~~~~~i~~~l~~~G~~a~~~~   89 (146)
                      ++++|.| ||+|.+|+++|+++|.+++||.++++|+..++++|..+  +++++|.+.|+++||.++++.
T Consensus         2 k~v~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~a~~~~   70 (72)
T d2ggpb1           2 REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR   70 (72)
T ss_dssp             EEEEEECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSSCCHHHHHHHHHHTTCCCEEEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCHHHHHHHHHHhCCCeEEcc
Confidence            5789999 99999999999999999999999999999999999844  899999999999999999875

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

Probab=99.56  E-value=2.3e-15  Score=90.11  Aligned_cols=62  Identities=24%  Similarity=0.511  Sum_probs=59.2

Q ss_pred             EEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHhcCCceE
Q 032167           25 TVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGHVDPNKVLKKVRSTGKRAE   86 (146)
Q Consensus        25 ~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~l~~~G~~a~   86 (146)
                      +++|.| ||+|.+|+.+|+++|.+++||.++.+|+.+++++|.+.+++++|.+.|.++||+++
T Consensus         2 t~~l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~~~~~~~i~~~i~~~GY~ve   64 (64)
T d1sb6a_           2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGHEVE   64 (64)
T ss_dssp             EEEEECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEESSSCHHHHHHHHHHHCCCCC
T ss_pred             eEEEEECCccchhHHHHHHHHHhcCCCeeEEEccCCCCEEEEccCCCHHHHHHHHHHcCCCCC
Confidence            468999 99999999999999999999999999999999999999999999999999999874

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

Probab=99.55  E-value=2.4e-14  Score=86.73  Aligned_cols=63  Identities=22%  Similarity=0.440  Sum_probs=59.2

Q ss_pred             ceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCce
Q 032167           23 WQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRA   85 (146)
Q Consensus        23 ~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a   85 (146)
                      |++.+|.| ||+|.+|.++|+++|++++||.++++|+..++++|..+   ++.++|.+.|+++||++
T Consensus         1 M~~~tl~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~~   67 (69)
T d2qifa1           1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV   67 (69)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred             CcEEEEEECCccCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHHhCCcc
Confidence            57889999 99999999999999999999999999999999999854   79999999999999986

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

Probab=99.55  E-value=1.9e-14  Score=87.85  Aligned_cols=66  Identities=27%  Similarity=0.395  Sum_probs=61.5

Q ss_pred             ceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCceEEe
Q 032167           23 WQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRAEFW   88 (146)
Q Consensus        23 ~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a~~~   88 (146)
                      .++++|.| ||+|.+|+++|+++|.+++||.++.+|+..+++.|..+   ++.++|.+.|+++||.++++
T Consensus         2 tqt~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~a~v~   71 (72)
T d1osda_           2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK   71 (72)
T ss_dssp             EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred             CeEEEEEECCcccHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhcCCCeEeC
Confidence            46889999 99999999999999999999999999999999999843   78999999999999999875

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

Probab=99.54  E-value=2e-14  Score=86.88  Aligned_cols=62  Identities=29%  Similarity=0.511  Sum_probs=58.1

Q ss_pred             EEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCceEEe
Q 032167           27 EIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRAEFW   88 (146)
Q Consensus        27 ~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a~~~   88 (146)
                      +|+| ||+|.+|+.+|+++|++++||.++++|+..++++|..+   +++++|.++|+++||.++++
T Consensus         3 el~V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~vi   68 (68)
T d1cpza_           3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEVI   68 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEEC
T ss_pred             EEEECCeEcHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEEC
Confidence            6899 99999999999999999999999999999999999853   78999999999999999864

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=4.9e-14  Score=87.50  Aligned_cols=71  Identities=17%  Similarity=0.337  Sum_probs=65.3

Q ss_pred             CCCceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCceEEecc
Q 032167           20 RKPWQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRAEFWPY   90 (146)
Q Consensus        20 ~~~~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a~~~~~   90 (146)
                      ...+.+++|.| ||+|.+|+++|+++|++++||.++++|+..++++|..+   ++..+|.+.|+++||++.+..+
T Consensus         4 ~~~~~~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~GY~~~~~~~   78 (79)
T d1kvja_           4 SMGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHNP   78 (79)
T ss_dssp             STTCEEEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECSC
T ss_pred             CCCceEEEEEECCeecHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHhcCCCcEeCCC
Confidence            34588999999 99999999999999999999999999999999999853   8999999999999999988753

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=3.7e-14  Score=86.54  Aligned_cols=65  Identities=25%  Similarity=0.393  Sum_probs=60.4

Q ss_pred             eEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCceEEe
Q 032167           24 QTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRAEFW   88 (146)
Q Consensus        24 ~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a~~~   88 (146)
                      ++..|+| ||+|.+|+++|+++|.+++||.++++|+..++++|..+   ++.++|.+.|+++||++.+.
T Consensus         3 ~~~~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~l~   71 (72)
T d2aw0a_           3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS   71 (72)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSEEEEC
T ss_pred             EEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEeC
Confidence            5678999 99999999999999999999999999999999999853   78999999999999998764

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=8.8e-14  Score=87.34  Aligned_cols=69  Identities=16%  Similarity=0.332  Sum_probs=63.6

Q ss_pred             CCceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCceEEec
Q 032167           21 KPWQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRAEFWP   89 (146)
Q Consensus        21 ~~~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a~~~~   89 (146)
                      ....+++|+| ||+|.+|.++|+++|.+++||.++++|+.+++++|..+   ++.+.|.+.|+++||++.+..
T Consensus         6 ~~~~~v~l~V~GMtC~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~~~~~~~i~~~I~~~Gy~a~~~~   78 (84)
T d1q8la_           6 AGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKK   78 (84)
T ss_dssp             SSCEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSC
T ss_pred             CCCEEEEEEECCeEcHHHHHHHHHHHhcCCCceEEEEECCCCEEceeecccccCHHHHHHHHHHhCCccEEcC
Confidence            3467889999 99999999999999999999999999999999999844   789999999999999998876

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.47  E-value=1.6e-13  Score=83.57  Aligned_cols=63  Identities=21%  Similarity=0.417  Sum_probs=58.7

Q ss_pred             ceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEe---eCCHHHHHHHHHhcCCce
Q 032167           23 WQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTG---HVDPNKVLKKVRSTGKRA   85 (146)
Q Consensus        23 ~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g---~~~~~~i~~~l~~~G~~a   85 (146)
                      .++++|.| ||+|.+|+.+|+++|.+++||.++.+|+..++++|..   .++.++|.+.|+++||.+
T Consensus         5 ~~~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~~~~~~i~~~i~~~Gy~v   71 (72)
T d1p6ta1           5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV   71 (72)
T ss_dssp             CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred             ceEEEEEECCeecHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHHhCCcc
Confidence            46889999 9999999999999999999999999999999999984   378999999999999975

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.47  E-value=1.4e-13  Score=85.37  Aligned_cols=67  Identities=19%  Similarity=0.353  Sum_probs=62.1

Q ss_pred             eEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHhcCCceEEecc
Q 032167           24 QTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH---VDPNKVLKKVRSTGKRAEFWPY   90 (146)
Q Consensus        24 ~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~l~~~G~~a~~~~~   90 (146)
                      .+++|.| ||+|.+|+.+|+++|..++||.++++|+..++++|..+   ++..+|.+.|+++||++.+.+.
T Consensus         2 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~   72 (79)
T d1p6ta2           2 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGE   72 (79)
T ss_dssp             EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCS
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEEeCCCEEEEEECCCCCCHHHHHHHHHHHCCceEECCc
Confidence            5688999 99999999999999999999999999999999999853   7999999999999999988763

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.45  E-value=2.3e-13  Score=83.17  Aligned_cols=65  Identities=25%  Similarity=0.343  Sum_probs=59.0

Q ss_pred             eEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee-CCHHHHHHHHHhcCCceEEe
Q 032167           24 QTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH-VDPNKVLKKVRSTGKRAEFW   88 (146)
Q Consensus        24 ~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~-~~~~~i~~~l~~~G~~a~~~   88 (146)
                      ++++|.| ||+|.+|+.+|+++|.+++||.++++|+.+++++|..+ ...++|.+.|.++||.+...
T Consensus         3 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~i~~~i~~~GY~v~~~   69 (73)
T d1mwza_           3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDE   69 (73)
T ss_dssp             CCEEEECTTCCSHHHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCCCCBC
T ss_pred             CEEEEEECCcCCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCHHHHHHHHHHcCCcccCC
Confidence            5678999 99999999999999999999999999999999999866 45789999999999987643

>d3bpda1 d.58.61.1 (A:1-91) Uncharacterized protein AF1549 {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: MTH889-like
family: MTH889-like
domain: Uncharacterized protein AF1549
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.61  E-value=0.58  Score=27.95  Aligned_cols=64  Identities=13%  Similarity=0.195  Sum_probs=45.9

Q ss_pred             ceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEec-----cCC--EEEEEee-CCHHHHHHHHHhcCCceEE
Q 032167           23 WQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNR-----KQS--RVTVTGH-VDPNKVLKKVRSTGKRAEF   87 (146)
Q Consensus        23 ~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~-----~~~--~v~V~g~-~~~~~i~~~l~~~G~~a~~   87 (146)
                      .+++.|.| --+-+.-.. +.+.|+.++||..+++..     ...  +++|.|. ++-+++.+.|++.|.....
T Consensus         4 irRlVLDVlKPh~p~~~~-~A~~l~~~~gV~~VnitV~EiD~~t~~i~ItiEG~~idyd~i~~~IE~~Gg~IHS   76 (91)
T d3bpda1           4 LRRLVLDVLKPHEPKTIV-FALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVIHS   76 (91)
T ss_dssp             EEEEEEEEEEESCSCHHH-HHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEEEE
T ss_pred             eeEEEEEeecCCCCCHHH-HHHHHhccCCcceEEEEEEEecccceEEEEEEEecCCCHHHHHHHHHHcCCeEEE
Confidence            46677777 444454444 777799999999888753     223  3456676 9999999999999976543

>d2raqa1 d.58.61.1 (A:3-95) Uncharacterized protein MTH889 {Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: MTH889-like
family: MTH889-like
domain: Uncharacterized protein MTH889
species: Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=90.05  E-value=1  Score=26.90  Aligned_cols=64  Identities=16%  Similarity=0.303  Sum_probs=46.4

Q ss_pred             ceEEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEe-----ccCCE--EEEEee-CCHHHHHHHHHhcCCceEE
Q 032167           23 WQTVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVN-----RKQSR--VTVTGH-VDPNKVLKKVRSTGKRAEF   87 (146)
Q Consensus        23 ~~~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd-----~~~~~--v~V~g~-~~~~~i~~~l~~~G~~a~~   87 (146)
                      .+++.|.| --+-+ -.-.+.+.|++++||..+++.     .....  ++|.|. ++-+++.+.|++.|.....
T Consensus         4 iRRlVLDVlKPh~P-~i~e~A~~l~~~~gV~~VnitV~EiD~et~~i~itiEG~~idyd~i~~~IE~~Gg~IHS   76 (93)
T d2raqa1           4 LIRIVLDILKPHEP-IIPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSIHS   76 (93)
T ss_dssp             EEEEEEEEECCSCS-CHHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEEEE
T ss_pred             eEEEEEEeecCCCC-CHHHHHHHHhccCCcceEEEEEEEecccceEEEEEEEecCCCHHHHHHHHHHcCCeEEE
Confidence            56777888 44444 445667779999999888775     33343  455676 9999999999999976544

>d1je3a_ d.68.3.3 (A:) hypothetical protein YedF (EC005) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: IF3-like
superfamily: SirA-like
family: SirA-like
domain: hypothetical protein YedF (EC005)
species: Escherichia coli [TaxId: 562]

Probab=82.14  E-value=1.5  Score=26.16  Aligned_cols=56  Identities=13%  Similarity=0.077  Sum_probs=41.7

Q ss_pred             EEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee--CCHHHHHHHHHhcCCceEEec
Q 032167           25 TVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH--VDPNKVLKKVRSTGKRAEFWP   89 (146)
Q Consensus        25 ~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~--~~~~~i~~~l~~~G~~a~~~~   89 (146)
                      ..++.+ |+.|+....+++++|..++-         .+.+.|..+  ....+|..-+++.|+......
T Consensus        27 d~~LD~~G~~CP~Pll~~k~~l~~l~~---------Ge~L~V~~dd~~a~~di~~~~~~~g~~v~~~~   85 (97)
T d1je3a_          27 DYRLDMVGEPCPYPAVATLEAMPQLKK---------GEILEVVSDCPQSINNIPLDARNHGYTVLDIQ   85 (97)
T ss_dssp             EEEECSBCCSSSSSTHHHHHHTTTCCS---------SCEEEEEEBCSSSSCHHHHHHHHHTCSEEEEE
T ss_pred             ceEEeCCCCcCCHHHHHHHHHHHcCCC---------CCEEEEEeCCccHHHHHHHHHHHcCCEEEEEE
Confidence            357888 99999999999999987732         233444433  456788888999999886554

>d1dcja_ d.68.3.3 (A:) SirA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: IF3-like
superfamily: SirA-like
family: SirA-like
domain: SirA
species: Escherichia coli [TaxId: 562]

Probab=80.67  E-value=2.8  Score=23.81  Aligned_cols=56  Identities=9%  Similarity=0.058  Sum_probs=41.3

Q ss_pred             EEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee--CCHHHHHHHHHhcCCceEEec
Q 032167           25 TVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH--VDPNKVLKKVRSTGKRAEFWP   89 (146)
Q Consensus        25 ~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~--~~~~~i~~~l~~~G~~a~~~~   89 (146)
                      ..+|.+ |+.|+...-+++++|..++.         .+.+.|..+  .....|..-++..|+......
T Consensus         9 ~~~lD~~G~~CP~P~l~~k~al~~~~~---------G~~l~v~~dd~~a~~di~~~~~~~g~~~~~~~   67 (81)
T d1dcja_           9 DHTLDALGLRCPEPVMMVRKTVRNMQP---------GETLLIIADDPATTRDIPGFCTFMEHELVAKE   67 (81)
T ss_dssp             SEEECCTTCCTTHHHHHHHHHHHHCCT---------TCCEEEEECSTTHHHHHHHHHHHTTCEEEEEE
T ss_pred             CeEEECCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEeCCCcHHHHHHHHHHHcCCEEEEEE
Confidence            457888 99999999999999998733         223444433  556778888899999876554

>d1jdqa_ d.68.3.3 (A:) Hypothetical protein TM0983 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: IF3-like
superfamily: SirA-like
family: SirA-like
domain: Hypothetical protein TM0983
species: Thermotoga maritima [TaxId: 2336]

Probab=80.30  E-value=3.2  Score=24.63  Aligned_cols=53  Identities=17%  Similarity=0.208  Sum_probs=40.1

Q ss_pred             EEEEEE-cCcChhhHHHHHHHHhCCCCceEEEEeccCCEEEEEee--CCHHHHHHHHHhcCCceE
Q 032167           25 TVEIKV-KMDCDGCERRVRHAVSSMKGAKSVEVNRKQSRVTVTGH--VDPNKVLKKVRSTGKRAE   86 (146)
Q Consensus        25 ~~~l~V-~m~C~~C~~kv~k~l~~~~GV~~v~vd~~~~~v~V~g~--~~~~~i~~~l~~~G~~a~   86 (146)
                      +.++.+ |..|+...-+++++|..++.         .+.+.|..+  .....|.+-+++.|+...
T Consensus        26 ~~~LD~rG~~CP~Pll~~kkal~~l~~---------Ge~L~V~~dd~~a~~dI~~~~~~~g~~i~   81 (98)
T d1jdqa_          26 TKTLDVRGEVCPVPDVETKRALQNMKP---------GEILEVWIDYPMSKERIPETVKKLGHEVL   81 (98)
T ss_dssp             CEEEECSSCCSSHHHHHHHHHHHTCCT---------TCEEEEEESSCTHHHHHHHHHHHSSCCEE
T ss_pred             CeeEECCCCcCCHHHHHHHHHHHcCCC---------CCEEEEEeCCcchHHHHHHHHHHcCCEEE
Confidence            347899 99999999999999998733         234445433  456778888899999874