Citrus Sinensis ID: 032356

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140--
Protein Sequence
MLLLPLFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLEGRVAVPDFIPDSSVSNIDETKSEAMRKYYQFITEQSGSHTQSKPLTGSSTSAVDKLFTGSSASAVDLYPVNSDRLWE
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHccccccccccccccccccccHHHHHHHHcccccccccccEEEcccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHcccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHcc
Coil and Loop (DISEMBL)
MLLLPLFDYALVLKEQGNlmelvdphlglnfVEEQAMVMINVALLCAdvshtnrplMSSVVSMLegrvavpdfipdssvsnideTKSEAMRKYYQFITeqsgshtqskpltgsstsavdklftgssasavdlypvnsdrlwe
Flexible Loop (DISEMBL)
MLLLPLFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLEGRVAvpdfipdssvsnideTKSEAMRKYYQFITeqsgshtqskpltgsSTSAVDKLFtgssasavdlypvnsdrlwe
Low Complexity Region (SEG)
MLLLPLFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLEGRVAVPDFIPDSSVSNIDETKSEAMRKYYQFITEQSGSHTQSKPLTGSSTSAVDKLFTGSSASAVDLYPVNSDRLWE
Disordered region (IsUnstruct)
*LLLPLFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLEGRVAVPDFI******************YYQFI*********************************************
Disordered Region (DISOPRED)
MLLLPLFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLEGRVAVPD************************************************************YPVNS*****
Disordered Region (DISEMBL)
MLLLPLFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLEGRVAVPDFIPDSSVSNIDETKSEAMRKYYQFITE****************SAVDKLFTGSSASAVDLYPVNSDRLWE
Disordered Region (DISPRO)
*LLLPLFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLEGRVAVPDFIPDSSVSNIDETKSEAMRKYYQF***********************************L***NS***W*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLLLPLFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLEGRVAVPDFIPDSSVSNIDETKSEAMRKYYQFITEQSGSHTQSKPLTGSSTSAVDKLFTGSSASAVDLYPVNSDRLWE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	142	2.2.26 [Sep-21-2011]
C0LGE0	1014	Probable LRR receptor-lik	yes	no	0.795	0.111	0.452	1e-19
C0LGG8	1038	Probable LRR receptor-lik	no	no	0.697	0.095	0.475	6e-17
C0LGG9	1035	Probable LRR receptor-lik	no	no	0.838	0.114	0.433	6e-17
C0LGN2	1020	Probable leucine-rich rep	no	no	0.873	0.121	0.401	2e-16
C0LGG7	953	Probable LRR receptor-lik	no	no	0.781	0.116	0.403	1e-13
Q9ASQ6	1019	Probable LRR receptor-lik	no	no	0.830	0.115	0.338	4e-10
Q9FXF2	1021	Probable LRR receptor-lik	no	no	0.514	0.071	0.438	4e-09
C0LGH3	1033	Probable LRR receptor-lik	no	no	0.753	0.103	0.328	9e-09
C0LGH2	1032	Probable LRR receptor-lik	no	no	0.464	0.063	0.447	2e-07
C0LGT1	613	Probable LRR receptor-lik	no	no	0.429	0.099	0.426	1e-06

>sp|C0LGE0|Y1765_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1

 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/115 (45%), Positives = 79/115 (68%), Gaps = 2/115 (1%)

Query: 6    LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
            L D+A VL+E+G+L+ELVDP L  ++ EE+AM+M+NVAL+C + S T RP MS VVS++E
Sbjct: 892  LLDWAYVLQERGSLLELVDPTLASDYSEEEAMLMLNVALMCTNASPTLRPTMSQVVSLIE 951

Query: 66   GRVAVPDFIPDSSVSNIDETKSEAMRK-YYQFITEQSGSHTQSKPLTGSSTSAVD 119
            G+ A+ + + D S S ++  K +A+R  ++Q    +S S + S P T S+ S VD
Sbjct: 952  GKTAMQELLSDPSFSTVNP-KLKALRNHFWQNELSRSLSFSTSGPRTASANSLVD 1005

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|C0LGG8|Y5343_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1

 Score = 86.3 bits (212), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 49/103 (47%), Positives = 68/103 (66%), Gaps = 4/103 (3%)

Query: 6   LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
           L D+A VL+EQG+L+ELVDP LG +F +++AM M+N+ALLC + S T RP MSSVVSMLE
Sbjct: 882 LLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLE 941

Query: 66  GRVAVPDFIPDSSVSNIDETKSEAMR-KYYQFITEQSGSHTQS 107
           G++ V    P       D + S AMR K  + +++ S S   +
Sbjct: 942 GKIKVQ---PPLVKREADPSGSAAMRFKALELLSQDSESQVST 981

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGG9|Y5344_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2

 Score = 86.3 bits (212), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 55/127 (43%), Positives = 82/127 (64%), Gaps = 8/127 (6%)

Query: 6    LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
            L D+A VL+EQG+L+ELVDP LG +F +++AM M+N+ALLC + S T RP MSSVVSML+
Sbjct: 880  LLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLQ 939

Query: 66   GRVAV-PDFIPDSSVSNIDETKSEAMR-KYYQFITEQSGSH--TQSKPLTGSSTSAVDKL 121
            G++ V P  +   +    D + S AMR K  + +++ S S   T ++     S+S++D  
Sbjct: 940  GKIKVQPPLVKREA----DPSGSAAMRFKALEHLSQDSESQVSTYTRNKEHKSSSSMDGP 995

Query: 122  FTGSSAS 128
            +  SS S
Sbjct: 996  WVDSSFS 1002

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGN2|Y3148_ARATH Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 OS=Arabidopsis thaliana GN=LRR-RLK PE=1 SV=1

 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 83/137 (60%), Gaps = 13/137 (9%)

Query: 6    LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
            L D+  VL+EQ  L+E+VDP LG ++ +++A++MI + +LC   +  +RP MS+VVSMLE
Sbjct: 885  LLDWVHVLREQNTLLEVVDPRLGTDYNKQEALMMIQIGMLCTSPAPGDRPSMSTVVSMLE 944

Query: 66   GRVAVP-DFIPDSSVSN-IDETKSEAMRKYYQFI--TEQSGSHTQSKPLTGSSTSAVDKL 121
            G   V  + + ++SV+N  DE    AM+++Y  I   E + + T   P T SST      
Sbjct: 945  GHSTVNVEKLLEASVNNEKDEESVRAMKRHYATIGEEEITNTTTTDGPFTSSST------ 998

Query: 122  FTGSSASAVDLYPVNSD 138
               S+A+A DLYPV  D
Sbjct: 999  ---STANANDLYPVKLD 1012

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGG7|Y1534_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2

 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 6   LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
           L D+  VL+E+ NL+ELVDP LG  +  E+AM MI +A++C       RP MS VV MLE
Sbjct: 837 LIDWVEVLREKNNLLELVDPRLGSEYNREEAMTMIQIAIMCTSSEPCERPSMSEVVKMLE 896

Query: 66  GRVAVP-DFIPDSSVSNIDETKS----EAMRKYYQFITEQSGSHTQSKPLTGSSTSAVD 119
           G+  V  + + ++SV    ETK       M+KYY+ I  Q  S + S  ++  S S+ D
Sbjct: 897 GKKMVEVEKLEEASVHR--ETKRLENMNTMKKYYEMIG-QEISTSMSMIMSDRSESSAD 952

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ASQ6|Y1972_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g29720 OS=Arabidopsis thaliana GN=RFK1 PE=2 SV=3

 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 69/130 (53%), Gaps = 12/130 (9%)

Query: 6    LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
            L ++AL L++ G+++E+VD  L   F   +A+ MI VAL+C + S + RP MS  V MLE
Sbjct: 884  LINWALTLQQTGDILEIVDRMLEGEFNRSEAVRMIKVALVCTNSSPSLRPTMSEAVKMLE 943

Query: 66   GRVAVPDFIPDSSVSNIDETKSEAMRKYYQFITEQSGSHTQSKPLTGSSTSAVDKLFTGS 125
            G + +   + D  +   D + S+ +R     I   S S T    +T  +T+ +      S
Sbjct: 944  GEIEITQVMSDPGIYGHDWSISK-LRD----IDTHSSSSTSG--VTDQTTTTMK-----S 991

Query: 126  SASAVDLYPV 135
            S S  DLYP+
Sbjct: 992  SVSGCDLYPL 1001

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FXF2|RKF1_ARATH Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/73 (43%), Positives = 45/73 (61%)

Query: 6   LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
           L ++A    E G+LM++VD  L      ++A  +I VAL+C+  S T+RPLMS VV+MLE
Sbjct: 894 LLEFANECVESGHLMQVVDERLRPEVDRKEAEAVIKVALVCSSASPTDRPLMSEVVAMLE 953

Query: 66  GRVAVPDFIPDSS 78
           G   VP+  P  S
Sbjct: 954 GLYPVPESTPGVS 966

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGH3|Y5614_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2

 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 18/125 (14%)

Query: 6    LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
            L ++A  L E+G  +EL+D  L   F  E+   MI +ALLC   SH  RP MS VV+ML 
Sbjct: 904  LLEWAWNLHEKGREVELIDHQL-TEFNMEEGKRMIGIALLCTQTSHALRPPMSRVVAMLS 962

Query: 66   GRVAV------PDFIPD--------SSVSNIDETKSEAMRKYYQFI---TEQSGSHTQSK 108
            G V V      P ++ D        SS+S      ++A   +  F+   +E S  +  ++
Sbjct: 963  GDVEVSDVTSKPGYLTDWRFDDTTASSISGFPLRNTQASESFTSFVAPRSEISPRNNDAR 1022

Query: 109  PLTGS 113
            P+ G+
Sbjct: 1023 PMLGA 1027

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGH2|Y1561_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 6   LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
           L ++A  L E+   +EL+D  L  +F  E+A  MI +ALLC   SH  RP MS VV+ML 
Sbjct: 905 LLEWAWNLHEKSRDIELIDDKL-TDFNMEEAKRMIGIALLCTQTSHALRPPMSRVVAMLS 963

Query: 66  GRVAVPD 72
           G V + D
Sbjct: 964 GDVEIGD 970

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGT1|Y5129_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 38/61 (62%)

Query: 6   LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
           L D+   L+ +  L  +VD +L   +++E+  +MI VALLC   S  +RP+MS VV MLE
Sbjct: 506 LLDHVKKLEREKRLGAIVDKNLDGEYIKEEVEMMIQVALLCTQGSPEDRPVMSEVVRMLE 565

Query: 66  G 66
           G
Sbjct: 566 G 566

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	142
357451913	406	Receptor-like protein kinase [Medicago t	0.929	0.325	0.528	1e-28
255567058	985	ATP binding protein, putative [Ricinus c	0.922	0.132	0.507	2e-28
357451937	899	Receptor-like protein kinase [Medicago t	0.929	0.146	0.521	3e-28
357451927	432	Receptor-like protein kinase [Medicago t	0.922	0.303	0.514	4e-28
357451935	1208	Receptor-like serine/threonine kinase [M	0.887	0.104	0.526	2e-26
351725041	272	receptor-like protein kinase [Glycine ma	0.936	0.488	0.485	2e-25
255567064	1007	ATP binding protein, putative [Ricinus c	0.915	0.129	0.485	1e-24
356542341	1018	PREDICTED: probable leucine-rich repeat	0.943	0.131	0.514	2e-24
357492929	996	Cysteine-rich receptor-like protein kina	0.816	0.116	0.511	1e-23
359493985	1011	PREDICTED: probable leucine-rich repeat	0.915	0.128	0.492	1e-23

>gi|357451913|ref|XP_003596233.1| Receptor-like protein kinase [Medicago truncatula] gi|355485281|gb|AES66484.1| Receptor-like protein kinase [Medicago truncatula]

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/138 (52%), Positives = 98/138 (71%), Gaps = 6/138 (4%)

Query: 6   LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
           L D+A +LKE+G+LMELVD  LGL+F +++AMVM+NVALLC +V+   R  MSSVVSMLE
Sbjct: 271 LLDWAQLLKEKGDLMELVDRRLGLDFNKKEAMVMMNVALLCTNVTSNFRTSMSSVVSMLE 330

Query: 66  GRVAVPDFIPDSSVSNIDETKSEAMRKYYQFITEQSGSHTQSKPLTGSSTSAVDKLFTGS 125
           GR  VP+F+PDSS   +DE K + MR+YY  I   + S++Q    T S +  +D  +T +
Sbjct: 331 GRNVVPEFVPDSS-EVMDEKKMKVMRQYYYQIDANNTSNSQ----TESQSLTIDGPWTAT 385

Query: 126 SASAVDLYPVNSD-RLWE 142
           S+SAVDLYPV+ D   WE
Sbjct: 386 SSSAVDLYPVHLDSSYWE 403

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255567058|ref|XP_002524511.1| ATP binding protein, putative [Ricinus communis] gi|223536185|gb|EEF37838.1| ATP binding protein, putative [Ricinus communis]

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/138 (50%), Positives = 92/138 (66%), Gaps = 7/138 (5%)

Query: 6   LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
           L D+ALVLKE+G+L+ELVDP +G N+ + Q M MINVAL CA VS   RP MSSVVS+LE
Sbjct: 851 LLDWALVLKEKGSLLELVDPRMGTNYDKNQVMTMINVALQCASVSSVARPAMSSVVSILE 910

Query: 66  GRVAVPDFIPDSSVSNIDETKSEAMRKYYQFITEQSGSHTQSKPLTGSSTSAVDKLFTGS 125
           G+  V D + D S  + DE K EAMRK++Q   E   S +Q++ +      ++D  +TGS
Sbjct: 911 GKTTVQDLVLDDSNVSHDEKKIEAMRKHFQHNIESQTSESQTQSM------SLDGPWTGS 964

Query: 126 SASAVDLYPVNSD-RLWE 142
           S+SA DLYP+  D   WE
Sbjct: 965 SSSAGDLYPITLDSNYWE 982

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357451937|ref|XP_003596245.1| Receptor-like protein kinase [Medicago truncatula] gi|355485293|gb|AES66496.1| Receptor-like protein kinase [Medicago truncatula]

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 72/138 (52%), Positives = 97/138 (70%), Gaps = 6/138 (4%)

Query: 6   LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
           L D+A +LK++G+LMELVD  LGL+F + +AMVMINVALLC +V+   RP MSSVVSMLE
Sbjct: 764 LLDWAHLLKDRGDLMELVDRRLGLDFDKNEAMVMINVALLCTNVTSNLRPPMSSVVSMLE 823

Query: 66  GRVAVPDFIPDSSVSNIDETKSEAMRKYYQFITEQSGSHTQSKPLTGSSTSAVDKLFTGS 125
           GR  VP+F+ DSS   +DE   E +R+YY  + E S S +Q++    S +  +D  +T +
Sbjct: 824 GRTVVPEFVSDSS-EVMDEKNMEVLRQYYYQMEENSTSKSQTQ----SQSLLIDGPWTAT 878

Query: 126 SASAVDLYPVNSD-RLWE 142
           S+SAVDLYPV+ D   WE
Sbjct: 879 SSSAVDLYPVHLDSSYWE 896

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357451927|ref|XP_003596240.1| Receptor-like protein kinase [Medicago truncatula] gi|355485288|gb|AES66491.1| Receptor-like protein kinase [Medicago truncatula]

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 71/138 (51%), Positives = 96/138 (69%), Gaps = 7/138 (5%)

Query: 6   LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
           L ++A +LKE+G+LMELVD  LGL+  +++AMVMINVALLC +V+   RP MSSVVSMLE
Sbjct: 298 LLEWAHMLKEKGDLMELVDGRLGLDLNKKEAMVMINVALLCTNVTSNLRPSMSSVVSMLE 357

Query: 66  GRVAVPDFIPDSSVSNIDETKSEAMRKYYQFITEQSGSHTQSKPLTGSSTSAVDKLFTGS 125
           GR  VP+F+PDSS   +D  K E MR+YY  I +++ S +Q++     S S +   +T S
Sbjct: 358 GRTVVPEFVPDSS-KVMDGNKMEEMRQYYYQIEDKTMSKSQTQ-----SQSLLSDGWTAS 411

Query: 126 SASAVDLYPVNSD-RLWE 142
            +SA DLYP+ SD   WE
Sbjct: 412 PSSAADLYPIQSDSSYWE 429

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357451935|ref|XP_003596244.1| Receptor-like serine/threonine kinase [Medicago truncatula] gi|355485292|gb|AES66495.1| Receptor-like serine/threonine kinase [Medicago truncatula]

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/133 (52%), Positives = 90/133 (67%), Gaps = 7/133 (5%)

Query: 6    LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
            L D+A +LKE+G+LMELVD  LG +F +++AMVMINVALLC + +   RP MSSVVSMLE
Sbjct: 1081 LLDWAELLKERGDLMELVDSRLGSDFNKKEAMVMINVALLCTNDTSNLRPSMSSVVSMLE 1140

Query: 66   GRVAVPDFIPDSSVSNIDETKSEAMRKYYQFITEQSGSHTQSKPLTGSSTSAVDKLFTGS 125
            GR  VP+F+ DSS   +DE K E MR+YY  + +     +QS+ L+       D   T S
Sbjct: 1141 GRTVVPEFVSDSS-EVMDEQKLEVMRQYYSQMEKNKVCKSQSRSLSS------DDQCTAS 1193

Query: 126  SASAVDLYPVNSD 138
            S+SAVDLYPV  D
Sbjct: 1194 SSSAVDLYPVQLD 1206

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725041|ref|NP_001235287.1| receptor-like protein kinase [Glycine max] gi|223452460|gb|ACM89557.1| receptor-like protein kinase [Glycine max]

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/140 (48%), Positives = 93/140 (66%), Gaps = 7/140 (5%)

Query: 4   LPLFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSM 63
           L L D+A +LKE+GNLMELVD  LG +F E + M+MI VALLC + +   RP MSSV+SM
Sbjct: 136 LHLLDWAHLLKEKGNLMELVDRRLGSDFNENEVMMMIKVALLCTNTTSNLRPTMSSVLSM 195

Query: 64  LEGRVAVPDFIPDSSVSNIDETKSEAMRKYYQFITEQSGSHTQSKPLTGSSTSAVDKLFT 123
           LEG+  +P+F+ D S   +DE K EAMR++Y F  E   S TQ +    + + +++  +T
Sbjct: 196 LEGKTMIPEFVSDPS-EIMDEMKLEAMRQHY-FQKENERSETQEQ----NHSLSIEGPWT 249

Query: 124 GSSASAVDLYPVNSD-RLWE 142
            SS+SA DLYPV+ D   WE
Sbjct: 250 ASSSSAADLYPVHVDSSYWE 269

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255567064|ref|XP_002524514.1| ATP binding protein, putative [Ricinus communis] gi|223536188|gb|EEF37841.1| ATP binding protein, putative [Ricinus communis]

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/138 (48%), Positives = 88/138 (63%), Gaps = 8/138 (5%)

Query: 6    LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
            L D+ALVLKE+G+L+ELVDP +G N+ + + M +INVAL CA VS   RP MSSVVSMLE
Sbjct: 874  LLDWALVLKEKGSLLELVDPRMGTNYNKAEVMTVINVALQCASVSPGVRPAMSSVVSMLE 933

Query: 66   GRVAVPDFIPDSSVSNIDETKSEAMRKYYQFITEQSGSHTQSKPLTGSSTSAVDKLFTGS 125
            G+  V DF  ++S S+ DE K EAM K++Q   E   S +Q + +      ++D  +  S
Sbjct: 934  GKTVVQDFTQETS-SSFDEMKDEAMSKHFQHSIEHKTSESQIQSM------SLDGPWVAS 986

Query: 126  SASAVDLYPVNSD-RLWE 142
            S S  DLYPV  D   WE
Sbjct: 987  STSEQDLYPVTLDSNYWE 1004

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542341|ref|XP_003539625.1| PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840-like [Glycine max]

 Score =  117 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 72/140 (51%), Positives = 92/140 (65%), Gaps = 6/140 (4%)

Query: 4    LPLFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSM 63
            L L D+A +LKE+GNLMELVD  LG NF E + M+MI VALLC + +   RP MSSV+S+
Sbjct: 881  LHLLDWAHLLKEKGNLMELVDRRLGSNFNENEVMMMIKVALLCTNATSNLRPTMSSVLSI 940

Query: 64   LEGRVAVPDFIPDSSVSNIDETKSEAMRKYYQFITEQSGSHTQSKPLTGSSTSAVDKLFT 123
            LEGR  +P+FI D S   +DE K EAMR+YY  I E   + TQ    T S + ++D  + 
Sbjct: 941  LEGRTMIPEFISDPS-EIMDEMKLEAMRQYYFQIEENERNETQ----TESHSLSIDGSWM 995

Query: 124  GSSASAVDLYPVNSD-RLWE 142
             SS+SA DLYPV+ D   WE
Sbjct: 996  ASSSSAADLYPVHVDSSYWE 1015

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357492929|ref|XP_003616753.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355518088|gb|AES99711.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula]

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/133 (51%), Positives = 88/133 (66%), Gaps = 17/133 (12%)

Query: 6   LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
           L D+A +LKE+GN +ELVD  LG NF +E+AM+MINVALLC +V+ + RP MSSVVSMLE
Sbjct: 873 LLDWAHILKEKGNEIELVDKRLGSNFNKEEAMLMINVALLCTNVTSSLRPAMSSVVSMLE 932

Query: 66  GRVAVPDFIPDSSVSNIDETKSEAMRKYYQFITEQSGSHTQSKPLTGSSTSAVDKLFTGS 125
           G++A+ + + +SS   +DE K EAMRK+YQ   +QS S     P T SS+S         
Sbjct: 933 GKIAIQELVLESS-EVLDEKKMEAMRKHYQ---DQSIS--MEGPWTASSSSVT------- 979

Query: 126 SASAVDLYPVNSD 138
                DLYPVN D
Sbjct: 980 ----TDLYPVNLD 988

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493985|ref|XP_002283578.2| PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840-like [Vitis vinifera]

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/138 (49%), Positives = 90/138 (65%), Gaps = 8/138 (5%)

Query: 6    LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
            L D AL LKE+G+LM++VDP LG +F +E+ M M+N+ALLC  +S   RP MSSVVSMLE
Sbjct: 878  LLDRALSLKEKGSLMDIVDPRLGSDFNKEEVMAMLNIALLCTTISSAVRPAMSSVVSMLE 937

Query: 66   GRVAVPDFIPDSSVSNIDETKSEAMRKYYQFITEQSGSHTQSKPLTGSSTSAVDKLFTGS 125
            GR AV D + D S  + D+ K E M+++Y+ I E+S   ++SK     + S  D  +T S
Sbjct: 938  GRTAVQDIVSDPSAPS-DDLKLEEMKEHYRHIQEKSMGVSESK-----AQSMPDGPWTAS 991

Query: 126  SASAVDLYPVNSD-RLWE 142
            S S  DLYPVN D   WE
Sbjct: 992  S-SIPDLYPVNLDSEYWE 1008

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	142
TAIR|locus:2203718	1035	AT1G53440 [Arabidopsis thalian	0.845	0.115	0.436	2.1e-16
TAIR|locus:2009630	953	AT1G53420 [Arabidopsis thalian	0.781	0.116	0.394	1.1e-13
TAIR|locus:2019367	1078	AT1G29740 [Arabidopsis thalian	0.5	0.065	0.450	3e-11
TAIR|locus:2019317	969	AT1G29730 [Arabidopsis thalian	0.767	0.112	0.387	3e-10
TAIR|locus:2203847	1021	RKF1 "receptor-like kinase in	0.781	0.108	0.339	1.8e-09
TAIR|locus:2205250	1032	AT1G56130 [Arabidopsis thalian	0.859	0.118	0.333	2.5e-07
TAIR|locus:2149795	688	LECRKA4.2 "lectin receptor kin	0.781	0.161	0.289	1.1e-06
TAIR|locus:2165301	654	AT5G51770 [Arabidopsis thalian	0.640	0.139	0.380	1.3e-06
TAIR|locus:2145407	613	AT5G10290 [Arabidopsis thalian	0.429	0.099	0.426	2.4e-06
TAIR|locus:2138014	651	AT4G25390 [Arabidopsis thalian	0.521	0.113	0.4	2.7e-06

TAIR|locus:2203718 AT1G53440 [Arabidopsis thaliana (taxid:3702)]

 Score = 216 (81.1 bits), Expect = 2.1e-16, P = 2.1e-16
 Identities = 55/126 (43%), Positives = 80/126 (63%)

Query:     6 LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
             L D+A VL+EQG+L+ELVDP LG +F +++AM M+N+ALLC + S T RP MSSVVSML+
Sbjct:   880 LLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLQ 939

Query:    66 GRVAVPDFIPDSSVSNIDETKSEAMR-KYYQFITEQSGSH--TQSKPLTGSSTSAVDKLF 122
             G++ V    P       D + S AMR K  + +++ S S   T ++     S+S++D  +
Sbjct:   940 GKIKVQ---PPLVKREADPSGSAAMRFKALEHLSQDSESQVSTYTRNKEHKSSSSMDGPW 996

Query:   123 TGSSAS 128
               SS S
Sbjct:   997 VDSSFS 1002

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2009630 AT1G53420 [Arabidopsis thaliana (taxid:3702)]

 Score = 190 (71.9 bits), Expect = 1.1e-13, P = 1.1e-13
 Identities = 47/119 (39%), Positives = 69/119 (57%)

Query:     6 LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
             L D+  VL+E+ NL+ELVDP LG  +  E+AM MI +A++C       RP MS VV MLE
Sbjct:   837 LIDWVEVLREKNNLLELVDPRLGSEYNREEAMTMIQIAIMCTSSEPCERPSMSEVVKMLE 896

Query:    66 GRVAVP-DFIPDSSVSNIDETKS----EAMRKYYQFITEQSGSHTQSKPLTGSSTSAVD 119
             G+  V  + + ++SV    ETK       M+KYY+ I ++  S + S  ++  S S+ D
Sbjct:   897 GKKMVEVEKLEEASVHR--ETKRLENMNTMKKYYEMIGQEI-STSMSMIMSDRSESSAD 952

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2019367 AT1G29740 [Arabidopsis thaliana (taxid:3702)]

 Score = 137 (53.3 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
 Identities = 32/71 (45%), Positives = 43/71 (60%)

Query:     6 LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
             L D+A VL+++G   E++DP L   F   +A  MI V+LLC+  S T RP MS VV MLE
Sbjct:   889 LLDWAFVLQKKGAFDEILDPKLEGVFDVMEAERMIKVSLLCSSKSPTLRPTMSEVVKMLE 948

Query:    66 GRVAVPDFIPD 76
             G   + + I D
Sbjct:   949 GETEIEEIISD 959

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2019317 AT1G29730 [Arabidopsis thaliana (taxid:3702)]

 Score = 158 (60.7 bits), Expect = 3.0e-10, P = 3.0e-10
 Identities = 43/111 (38%), Positives = 57/111 (51%)

Query:     6 LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
             L D+A VL+++G++ E++DP L   F   +A  MI V+LLCA+ S T RP MS VV MLE
Sbjct:   853 LLDWAFVLQKKGDIAEILDPRLEGMFDVMEAERMIKVSLLCANKSSTLRPNMSQVVKMLE 912

Query:    66 GRVAVPDFIPDSSV--SNIDETKSEAMRKYYQFITEQSGSHTQSKPLTGSS 114
             G   +   I D  V   N+    S     Y   I   S S     PL+  S
Sbjct:   913 GETEIEQIISDPGVYSDNLHFKPSSLSSDYILSIPSSSESAYDLYPLSPES 963

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2203847 RKF1 "receptor-like kinase in flowers 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 151 (58.2 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 38/112 (33%), Positives = 61/112 (54%)

Query:     6 LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
             L ++A    E G+LM++VD  L      ++A  +I VAL+C+  S T+RPLMS VV+MLE
Sbjct:   894 LLEFANECVESGHLMQVVDERLRPEVDRKEAEAVIKVALVCSSASPTDRPLMSEVVAMLE 953

Query:    66 GRVAVPDFIPDSSVSNIDETKSEAMRKYYQFITEQSGSHTQSKPLTGSSTSA 117
             G   VP+  P  S  N  + + +A +   + +   S +    K    SS+++
Sbjct:   954 GLYPVPESTPGVS-RNAGDIRFKAFKDLRRGMENNSKTQCSVKSYPSSSSTS 1004

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006857 "oligopeptide transport" evidence=RCA

GO:0004702 "receptor signaling protein serine/threonine kinase activity" evidence=ISS

TAIR|locus:2205250 AT1G56130 [Arabidopsis thaliana (taxid:3702)]

 Score = 131 (51.2 bits), Expect = 2.5e-07, P = 2.5e-07
 Identities = 43/129 (33%), Positives = 64/129 (49%)

Query:     6 LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
             L ++A  L E+   +EL+D  L  +F  E+A  MI +ALLC   SH  RP MS VV+ML 
Sbjct:   905 LLEWAWNLHEKSRDIELIDDKL-TDFNMEEAKRMIGIALLCTQTSHALRPPMSRVVAMLS 963

Query:    66 GRVAVPDFIPDSS-VSN--IDETKSEAMRKYYQFITEQSGSHTQSKPLTGSSTSAVDKLF 122
             G V + D       VS+   D+T   ++  +   I + +G ++ S    GS  S  D  F
Sbjct:   964 GDVEIGDVTSKPGYVSDWRFDDTTGSSLSGFQ--IKDTTG-YSMSLVAPGSEISPRDSDF 1020

Query:   123 TGSSASAVD 131
                  S ++
Sbjct:  1021 KPMLGSKIN 1029

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2149795 LECRKA4.2 "lectin receptor kinase a4.1" [Arabidopsis thaliana (taxid:3702)]

 Score = 123 (48.4 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 33/114 (28%), Positives = 59/114 (51%)

Query:     6 LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
             L D+ + L  +G ++  VDP LG  +   +A + + V LLC     T+RP M +V+  L 
Sbjct:   573 LADWVMELHARGEILHAVDPRLGFGYDGVEARLALVVGLLCCHQRPTSRPSMRTVLRYLN 632

Query:    66 GRVAVPDFIPDSSVSNIDETKSEAMRKYYQFIT-EQSGSHTQSKPLTGSSTSAV 118
             G   VP+   D   S  D ++S+    +  +++ +++ S   S  +T  S+S+V
Sbjct:   633 GDDDVPEIDNDWGYS--DSSRSDLGSNFEGYVSSDRASSSVPSFSVTRVSSSSV 684

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=IMP

GO:0009845 "seed germination" evidence=IMP

GO:0010200 "response to chitin" evidence=RCA

TAIR|locus:2165301 AT5G51770 [Arabidopsis thaliana (taxid:3702)]

 Score = 122 (48.0 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 35/92 (38%), Positives = 47/92 (51%)

Query:     1 MLLLPLFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSV 60
             ML   L  +A  L  +G L +LVD  L L   +EQA++ I VAL C   S  +RP M  V
Sbjct:   561 MLRANLMSWARKLARRGRLGDLVDEKLQL-LDQEQAVLCIKVALQCLQKSPVSRPSMKDV 619

Query:    61 VSMLEGRVAVPDFIPDSSVSNIDETKSEAMRK 92
             + ML G ++ PD   + S S       +A RK
Sbjct:   620 LEMLTGAISPPDLPTEFSPSPQTRFPFKARRK 651

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2145407 AT5G10290 [Arabidopsis thaliana (taxid:3702)]

 Score = 119 (46.9 bits), Expect = 2.4e-06, P = 2.4e-06
 Identities = 26/61 (42%), Positives = 38/61 (62%)

Query:     6 LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
             L D+   L+ +  L  +VD +L   +++E+  +MI VALLC   S  +RP+MS VV MLE
Sbjct:   506 LLDHVKKLEREKRLGAIVDKNLDGEYIKEEVEMMIQVALLCTQGSPEDRPVMSEVVRMLE 565

Query:    66 G 66
             G
Sbjct:   566 G 566

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2138014 AT4G25390 [Arabidopsis thaliana (taxid:3702)]

 Score = 119 (46.9 bits), Expect = 2.7e-06, P = 2.7e-06
 Identities = 30/75 (40%), Positives = 43/75 (57%)

Query:     6 LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
             L  +A  L  +G L++LVD  L  N  +EQA++ I VALLC      +RP M  V+ ML+
Sbjct:   567 LMSWARKLARRGKLVDLVDQKLQ-NLDQEQAVLCIKVALLCLQRLPISRPSMKEVLGMLK 625

Query:    66 GRVAVPDFIPDSSVS 80
             G V +P+   + S S
Sbjct:   626 GEVNLPELPSEFSPS 640

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00027895001 SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (1040 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	142
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.06
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	97.57
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	95.5
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	94.58
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	94.47
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	94.43
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	94.32
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	94.3
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	94.25
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	94.15
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	94.1
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	93.98
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	93.97
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	93.89
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	93.77
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	93.76
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	93.73
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	93.72
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	93.58
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	93.54
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	93.52
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	93.49
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	93.48
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	93.45
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	93.34
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	93.33
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	93.29
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	93.17
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	93.1
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	93.09
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	93.04
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	92.99
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	92.93
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	92.87
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	92.78
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	92.72
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	92.7
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	92.64
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	92.64
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	92.57
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	92.49
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	92.36
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	92.32
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	92.3
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	92.3
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	92.24
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	92.18
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	92.16
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	92.12
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	92.11
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	92.11
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	92.02
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	91.94
PHA02988	283	hypothetical protein; Provisional	91.85
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	91.82
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	91.78
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	91.74
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	91.71
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	91.66
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	91.64
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	91.6
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	91.59
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	91.52
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	91.43
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	91.43
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	91.36
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	91.27
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	91.25
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	91.14
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	91.1
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	91.08
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	91.06
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	90.96
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	90.62
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	90.59
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	90.52
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	90.17
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	90.17
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	90.08
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	90.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	89.82
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	89.7
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	89.29
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	89.02
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	88.92
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	88.91
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	88.76
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	88.65
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	88.16
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	87.99
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	87.66
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	87.5
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	87.35
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	87.11
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	86.48
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	86.37
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	86.33
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	86.09
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	86.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	85.44
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	85.37
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	85.05
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	84.58
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	84.57
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	83.92
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	83.7
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	83.69
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	83.55
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	83.49
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	83.42
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	83.14
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	82.93
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	82.92
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	82.76
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	82.42
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	82.23
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	81.78
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	81.1
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	80.68
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	80.57
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	80.47
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	80.47
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	80.46
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	80.45
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	80.36
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	80.04
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	80.01
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	80.01

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.06  E-value=4.1e-10  Score=91.14  Aligned_cols=66  Identities=36%  Similarity=0.554  Sum_probs=58.8

Q ss_pred             cccHHHHHHHHHhcCCccceecCccC-CCchH-HHHHHHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356            3 LLPLFDYALVLKEQGNLMELVDPHLG-LNFVE-EQAMVMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus         3 ~~~L~~wv~~~~~~~~~~eivD~~L~-~~~~~-~~l~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      ..+|++|++..+.++++.+++|++|. +.+.. +++.+++.+|++|++.+|..||+|.+|+++|+...
T Consensus       286 ~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~  353 (361)
T KOG1187|consen  286 ELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL  353 (361)
T ss_pred             cccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence            45699999999999999999999997 55654 78999999999999999999999999999996544

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=97.57  E-value=0.00013  Score=65.33  Aligned_cols=66  Identities=21%  Similarity=0.325  Sum_probs=52.5

Q ss_pred             ccHHHHHHHHHhcCCccceecCccCC--CchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHhhcccC
Q 032356            4 LPLFDYALVLKEQGNLMELVDPHLGL--NFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLEGRVA   69 (142)
Q Consensus         4 ~~L~~wv~~~~~~~~~~eivD~~L~~--~~~~~~l~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~   69 (142)
                      ..+++|++..........++|+.+..  ....+++..+++++..|++.+|.+||+|.+|+++|+....
T Consensus       886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~  953 (968)
T PLN00113        886 GSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR  953 (968)
T ss_pred             CcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence            35778887776665566778888743  2446778889999999999999999999999999986543

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=95.50  E-value=0.015  Score=44.00  Aligned_cols=31  Identities=13%  Similarity=0.358  Sum_probs=27.6

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      ..+..+..+|++.+|..||+|.+|+++|+..
T Consensus       253 ~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         253 DEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            4577888999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=94.58  E-value=0.038  Score=41.45  Aligned_cols=30  Identities=20%  Similarity=0.325  Sum_probs=27.0

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      ..+..++..|++.+|.+||+|.++++.|+.
T Consensus       231 ~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         231 KELYDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             HHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence            457788899999999999999999999974

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=94.47  E-value=0.041  Score=41.98  Aligned_cols=29  Identities=17%  Similarity=0.326  Sum_probs=26.4

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhh
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLE   65 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~   65 (142)
                      ..+.++...|++.+|.+||++.+|++.|+
T Consensus       267 ~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         267 KDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             HHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence            45788999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=94.43  E-value=0.04  Score=42.30  Aligned_cols=29  Identities=14%  Similarity=0.339  Sum_probs=26.3

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhh
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLE   65 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~   65 (142)
                      ..+.++...|++.+|.+||+|.+|++.|+
T Consensus       266 ~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         266 SPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             HHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            35778999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=94.32  E-value=0.049  Score=41.37  Aligned_cols=30  Identities=17%  Similarity=0.258  Sum_probs=26.8

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|++.+|..||++.+|++.|+..
T Consensus       254 ~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         254 EIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            577888899999999999999999999753

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=94.30  E-value=0.049  Score=40.94  Aligned_cols=31  Identities=19%  Similarity=0.409  Sum_probs=27.3

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      ..+..+...|.+.+|.+||+|.+|++.|+..
T Consensus       237 ~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         237 SAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            3567889999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=94.25  E-value=0.047  Score=40.69  Aligned_cols=29  Identities=17%  Similarity=0.266  Sum_probs=25.6

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhh
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLE   65 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~   65 (142)
                      ..+..+...|++.+|..||++.+|+++|.
T Consensus       228 ~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         228 QSVYELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             HHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence            35778899999999999999999999873

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=94.15  E-value=0.058  Score=40.30  Aligned_cols=30  Identities=17%  Similarity=0.338  Sum_probs=26.5

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      ..+..+...|++.+|.+||++.++.+.|+.
T Consensus       231 ~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         231 QEIYKIMLECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             HHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence            346678889999999999999999999974

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=94.10  E-value=0.057  Score=40.60  Aligned_cols=31  Identities=26%  Similarity=0.423  Sum_probs=27.1

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      ..+.++...|++.+|..||++.+|++.|+..
T Consensus       235 ~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         235 SALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            3567888999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=93.98  E-value=0.06  Score=41.11  Aligned_cols=31  Identities=16%  Similarity=0.229  Sum_probs=27.5

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      ..+..+...|++.+|..||++.++++.|+..
T Consensus       261 ~~~~~li~~~l~~~p~~Rps~~eil~~l~~~  291 (293)
T cd05053         261 QELYHLMRDCWHEVPSQRPTFKQLVEDLDRM  291 (293)
T ss_pred             HHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence            4577889999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=93.97  E-value=0.057  Score=40.93  Aligned_cols=30  Identities=13%  Similarity=0.259  Sum_probs=26.6

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      ..+..+...|++.+|..||++.+|++.|+.
T Consensus       253 ~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         253 ARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence            456778899999999999999999999974

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=93.89  E-value=0.065  Score=40.98  Aligned_cols=31  Identities=26%  Similarity=0.359  Sum_probs=27.3

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      ..+..+...|++.+|.+||++.++++.|+..
T Consensus       256 ~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~  286 (290)
T cd05045         256 EEMYNLMLTCWKQEPDKRPTFADISKELEKM  286 (290)
T ss_pred             HHHHHHHHHHccCCcccCCCHHHHHHHHHHH
Confidence            3566788999999999999999999999864

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=93.77  E-value=0.062  Score=40.85  Aligned_cols=31  Identities=16%  Similarity=0.252  Sum_probs=27.5

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      ..+..+...|++.+|..||+|.+|+++|+..
T Consensus       251 ~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~  281 (283)
T cd05080         251 QEVYILMKNCWETEAKFRPTFRSLIPILKEM  281 (283)
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence            4677889999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=93.76  E-value=0.069  Score=39.92  Aligned_cols=27  Identities=15%  Similarity=0.341  Sum_probs=24.7

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHh
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSML   64 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L   64 (142)
                      .+..+...|.+.+|..||+|.++++.|
T Consensus       229 ~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         229 TVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             HHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            467888999999999999999999987

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=93.73  E-value=0.08  Score=40.37  Aligned_cols=29  Identities=24%  Similarity=0.471  Sum_probs=26.2

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhh
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLE   65 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~   65 (142)
                      ..+..+..+|++.+|..||++.++++.|+
T Consensus       259 ~~l~~li~~~l~~~p~~Rpt~~el~~~l~  287 (288)
T cd05050         259 LELYNLMRLCWSKLPSDRPSFASINRILQ  287 (288)
T ss_pred             HHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence            45777889999999999999999999986

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=93.72  E-value=0.082  Score=40.58  Aligned_cols=29  Identities=17%  Similarity=0.273  Sum_probs=26.0

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhh
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLE   65 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~   65 (142)
                      ..+.++..+|++.+|..||+|.+|++.|+
T Consensus       267 ~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         267 DSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            45678889999999999999999999886

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=93.58  E-value=0.067  Score=41.96  Aligned_cols=30  Identities=23%  Similarity=0.403  Sum_probs=26.8

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|++.+|..||++.+++++|+..
T Consensus       305 ~l~~li~~cl~~dp~~RPs~~el~~~l~~~  334 (338)
T cd05102         305 EIYRIMLACWQGDPKERPTFSALVEILGDL  334 (338)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            466788899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=93.54  E-value=0.091  Score=39.51  Aligned_cols=29  Identities=14%  Similarity=0.297  Sum_probs=25.6

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      .+..+...|++.+|.+||++.+++++|+.
T Consensus       233 ~~~~li~~cl~~~p~~Rp~~~~l~~~l~~  261 (263)
T cd05052         233 KVYELMRACWQWNPSDRPSFAEIHQAFET  261 (263)
T ss_pred             HHHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence            45667789999999999999999999974

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=93.52  E-value=0.088  Score=39.39  Aligned_cols=30  Identities=17%  Similarity=0.303  Sum_probs=26.4

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      ..+.++...|++.+|.+||++.++.++|+.
T Consensus       231 ~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         231 DELYDIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            356778889999999999999999999974

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=93.49  E-value=0.087  Score=39.62  Aligned_cols=28  Identities=21%  Similarity=0.326  Sum_probs=24.1

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhh
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLE   65 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~   65 (142)
                      .+..+..+|++.+|..||+|.+|+.+|+
T Consensus       241 ~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         241 DVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             HHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            3456667899999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=93.48  E-value=0.083  Score=40.72  Aligned_cols=28  Identities=21%  Similarity=0.379  Sum_probs=25.4

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhh
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLE   65 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~   65 (142)
                      .+.++...|.+.+|.+||+|.+|++.|+
T Consensus       276 ~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         276 GLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             HHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            4677889999999999999999999986

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=93.45  E-value=0.066  Score=43.09  Aligned_cols=29  Identities=24%  Similarity=0.478  Sum_probs=25.9

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      .+..+...|++.+|.+||++.+|+++|+.
T Consensus       345 ~l~~li~~cl~~dP~~RPs~~eil~~l~~  373 (375)
T cd05104         345 EMYDIMKSCWDADPLKRPTFKQIVQLIEQ  373 (375)
T ss_pred             HHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence            45678889999999999999999999985

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=93.34  E-value=0.083  Score=40.47  Aligned_cols=32  Identities=13%  Similarity=0.154  Sum_probs=28.1

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      ..+..+...|++.+|..||++.+|+++|+...
T Consensus       252 ~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~  283 (291)
T cd05094         252 KEVYDIMLGCWQREPQQRLNIKEIYKILHALG  283 (291)
T ss_pred             HHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence            35678889999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=93.33  E-value=0.096  Score=39.17  Aligned_cols=31  Identities=19%  Similarity=0.322  Sum_probs=27.2

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      ..+..+...|++.+|.+||++.+|++.|+..
T Consensus       225 ~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         225 QEIYSIMLSCWKYRPEDRPTFSELESTFRRD  255 (257)
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence            3566788899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=93.29  E-value=0.094  Score=39.30  Aligned_cols=30  Identities=17%  Similarity=0.352  Sum_probs=26.4

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      ..+..+...|++.+|.+||++.+|++.|+.
T Consensus       242 ~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~  271 (273)
T cd05035         242 DELYDLMYSCWRADPKDRPTFTKLREVLEN  271 (273)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence            456777888999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=93.17  E-value=0.084  Score=41.80  Aligned_cols=32  Identities=22%  Similarity=0.362  Sum_probs=27.9

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      ..+..+.+.|++.+|.+||++.+|+++|+...
T Consensus       303 ~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~  334 (337)
T cd05054         303 PEIYSIMLDCWHNNPEDRPTFSELVEILGDLL  334 (337)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            45678889999999999999999999998643

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=93.10  E-value=0.098  Score=38.92  Aligned_cols=29  Identities=21%  Similarity=0.274  Sum_probs=25.7

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhh
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLE   65 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~   65 (142)
                      ..+..+...|++.+|.+||++.+|.++|+
T Consensus       223 ~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         223 DAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            35667888999999999999999999986

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=93.09  E-value=0.096  Score=39.21  Aligned_cols=28  Identities=18%  Similarity=0.339  Sum_probs=25.3

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHh
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSML   64 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L   64 (142)
                      ..+..+...|++.+|.+||+|.+|+++|
T Consensus       228 ~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         228 TEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            3577899999999999999999999987

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=93.04  E-value=0.082  Score=39.96  Aligned_cols=28  Identities=14%  Similarity=0.263  Sum_probs=21.7

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHh
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSML   64 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L   64 (142)
                      ..+..+...|...+|.+||+|.++++.|
T Consensus       232 ~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  232 KDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            3466788999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=92.99  E-value=0.098  Score=39.64  Aligned_cols=28  Identities=14%  Similarity=0.410  Sum_probs=25.4

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhh
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLE   65 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~   65 (142)
                      .+..+...|++.+|.+||++.+++++|+
T Consensus       249 ~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         249 MLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence            4677888999999999999999999986

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=92.93  E-value=0.12  Score=38.26  Aligned_cols=29  Identities=28%  Similarity=0.295  Sum_probs=26.0

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhh
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLE   65 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~   65 (142)
                      ..+..+...|++.+|.+||++.++++.|.
T Consensus       221 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         221 DDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             HHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            46777889999999999999999999885

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=92.87  E-value=0.13  Score=38.69  Aligned_cols=30  Identities=17%  Similarity=0.216  Sum_probs=26.4

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      ..+..+...|++.+|.+||++.++++.|+.
T Consensus       241 ~~~~~li~~~l~~~p~~Rps~~~l~~~l~~  270 (272)
T cd05075         241 DGLYSLMSSCWLLNPKDRPSFETLRCELEK  270 (272)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence            346778889999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=92.78  E-value=0.12  Score=38.62  Aligned_cols=31  Identities=29%  Similarity=0.321  Sum_probs=27.1

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      ..+..+...|++.+|.+||++.+|++.|+..
T Consensus       229 ~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~  259 (262)
T cd05058         229 DPLYEVMLSCWHPKPEMRPTFSELVSRIEQI  259 (262)
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            3567888999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=92.72  E-value=0.13  Score=38.99  Aligned_cols=29  Identities=21%  Similarity=0.282  Sum_probs=25.5

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      .+..+...|++.+|..||++.+|+..|+.
T Consensus       254 ~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         254 WVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             HHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            35678889999999999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=92.70  E-value=0.13  Score=38.72  Aligned_cols=29  Identities=24%  Similarity=0.473  Sum_probs=25.9

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      .+..+...|++.+|..||+|.+|++.|+.
T Consensus       237 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  265 (267)
T cd05066         237 ALHQLMLDCWQKDRNERPKFEQIVSILDK  265 (267)
T ss_pred             HHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence            45678889999999999999999999975

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=92.64  E-value=0.13  Score=38.67  Aligned_cols=31  Identities=16%  Similarity=0.118  Sum_probs=27.7

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      ..+.++...|++.+|..||++.+|.+.|+..
T Consensus       242 ~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         242 EDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            4678899999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=92.64  E-value=0.11  Score=39.05  Aligned_cols=28  Identities=21%  Similarity=0.374  Sum_probs=24.5

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhh
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLE   65 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~   65 (142)
                      .+..+...|++.+|..||++.++++.|+
T Consensus       231 ~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         231 ELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             HHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            4567778899999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=92.57  E-value=0.14  Score=38.49  Aligned_cols=29  Identities=17%  Similarity=0.318  Sum_probs=25.2

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhh
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLE   65 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~   65 (142)
                      ..+..+...|++.+|.+||++.++++.|+
T Consensus       228 ~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         228 EKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            35677888999999999999999998874

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=92.49  E-value=0.16  Score=38.01  Aligned_cols=29  Identities=14%  Similarity=0.299  Sum_probs=24.6

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      .+..+...|++.+|.+||+|.+|.++++.
T Consensus       236 ~~~~li~~~l~~~p~~Rpt~~~i~~~~~~  264 (267)
T cd08229         236 ELRQLVNMCINPDPEKRPDITYVYDVAKR  264 (267)
T ss_pred             HHHHHHHHhcCCCcccCCCHHHHHHHHhh
Confidence            45566678999999999999999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=92.36  E-value=0.13  Score=39.30  Aligned_cols=31  Identities=16%  Similarity=0.191  Sum_probs=27.5

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|++.+|.+||++.+|...|+...
T Consensus       250 ~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~  280 (288)
T cd05093         250 EVYDLMLGCWQREPHMRLNIKEIHSLLQNLA  280 (288)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence            4678899999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=92.32  E-value=0.16  Score=37.97  Aligned_cols=30  Identities=23%  Similarity=0.402  Sum_probs=26.3

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      ..+..+...|++.+|.+||++.++.+.|+.
T Consensus       230 ~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         230 ISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             HHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            356778899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=92.30  E-value=0.14  Score=38.74  Aligned_cols=30  Identities=13%  Similarity=0.224  Sum_probs=26.8

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|++.+|..||++.+++..|+..
T Consensus       239 ~~~~li~~~l~~~p~~Rps~~~il~~l~~~  268 (270)
T cd05047         239 EVYDLMRQCWREKPYERPSFAQILVSLNRM  268 (270)
T ss_pred             HHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence            467889999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=92.30  E-value=0.14  Score=38.73  Aligned_cols=30  Identities=23%  Similarity=0.342  Sum_probs=26.6

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|++.+|..||++.+|+++|+..
T Consensus       247 ~~~~li~~~l~~~p~~Rps~~~~~~~l~~~  276 (280)
T cd05043         247 ELFAVMACCWALDPEERPSFSQLVQCLTDF  276 (280)
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            467788999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=92.24  E-value=0.14  Score=38.55  Aligned_cols=29  Identities=24%  Similarity=0.426  Sum_probs=25.7

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      .+..+...|++.+|.+||+|.+|+.+|+.
T Consensus       239 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  267 (269)
T cd05065         239 ALHQLMLDCWQKDRNARPKFGQIVSTLDK  267 (269)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence            45678889999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=92.18  E-value=0.16  Score=38.62  Aligned_cols=30  Identities=10%  Similarity=0.229  Sum_probs=27.0

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      ..+..+...|++.+|.+||++.++++.|+.
T Consensus       253 ~~~~~li~~~l~~~p~~Rpt~~~il~~l~~  282 (284)
T cd05079         253 EEVYQLMRKCWEFQPSKRTTFQNLIEGFEA  282 (284)
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHHHHHh
Confidence            467788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=92.16  E-value=0.17  Score=38.32  Aligned_cols=28  Identities=11%  Similarity=0.325  Sum_probs=25.0

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhh
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLE   65 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~   65 (142)
                      .+..+...|++.+|.+||++.+|++.|+
T Consensus       249 ~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         249 PVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            4567888999999999999999999885

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=92.12  E-value=0.18  Score=37.64  Aligned_cols=30  Identities=17%  Similarity=0.210  Sum_probs=25.9

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      ..+..+...|++.+|.+||++.+++++|+.
T Consensus       226 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  255 (256)
T cd05039         226 PEVYKVMKDCWELDPAKRPTFKQLREQLAL  255 (256)
T ss_pred             HHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence            345677788999999999999999999974

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=92.11  E-value=0.14  Score=40.54  Aligned_cols=30  Identities=27%  Similarity=0.318  Sum_probs=26.6

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+.++...|++.+|..||++.+|++.|+..
T Consensus       310 ~~~~~~~~cl~~~p~~Rps~~eil~~l~~~  339 (343)
T cd05103         310 EMYQTMLDCWHGEPSQRPTFSELVEHLGNL  339 (343)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            467788899999999999999999999754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=92.11  E-value=0.17  Score=37.92  Aligned_cols=29  Identities=24%  Similarity=0.290  Sum_probs=25.4

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      .+..+-..|.+.+|.+||+|.+|++.|+.
T Consensus       226 ~l~~li~~~~~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         226 EMYDLMKLCWTYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             HHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence            45567789999999999999999999974

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=92.02  E-value=0.16  Score=39.07  Aligned_cols=33  Identities=15%  Similarity=0.201  Sum_probs=27.8

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhcccC
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEGRVA   69 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~   69 (142)
                      ..+..+...|++.+|..||+|.+|++.|+....
T Consensus       266 ~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~  298 (304)
T cd05101         266 NELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT  298 (304)
T ss_pred             HHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence            345667889999999999999999999986554

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=91.94  E-value=0.2  Score=37.67  Aligned_cols=30  Identities=17%  Similarity=0.282  Sum_probs=27.1

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      ..+.++...|++.+|.+||++.++.++|+.
T Consensus       230 ~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~  259 (262)
T cd05071         230 ESLHDLMCQCWRKEPEERPTFEYLQAFLED  259 (262)
T ss_pred             HHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence            456789999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>PHA02988 hypothetical protein; Provisional

Probab=91.85  E-value=0.2  Score=38.46  Aligned_cols=29  Identities=14%  Similarity=0.228  Sum_probs=25.0

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      .+..+...|.+.+|.+||++.+|++.|+.
T Consensus       250 ~l~~li~~cl~~dp~~Rps~~ell~~l~~  278 (283)
T PHA02988        250 EIKCIVEACTSHDSIKRPNIKEILYNLSL  278 (283)
T ss_pred             HHHHHHHHHhcCCcccCcCHHHHHHHHHH
Confidence            35566778999999999999999999875

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=91.82  E-value=0.18  Score=37.65  Aligned_cols=29  Identities=24%  Similarity=0.363  Sum_probs=25.5

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      .+..+...|++.+|.+||++.++++.|+.
T Consensus       227 ~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  255 (256)
T cd05082         227 VVYDVMKQCWHLDAATRPSFLQLREQLEH  255 (256)
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence            45677889999999999999999999874

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=91.78  E-value=0.23  Score=37.01  Aligned_cols=30  Identities=17%  Similarity=0.280  Sum_probs=26.1

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|++.+|..||++.+|+++|+..
T Consensus       236 ~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~  265 (267)
T cd08224         236 ELRDLVSRCINPDPEKRPDISYVLQVAKEM  265 (267)
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence            456777889999999999999999999753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=91.74  E-value=0.21  Score=37.36  Aligned_cols=31  Identities=13%  Similarity=0.186  Sum_probs=26.3

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      ..+..+...|.+.+|.+||++.+|++.|+..
T Consensus       235 ~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         235 EKLRELVSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             HHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence            3456677789999999999999999999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=91.71  E-value=0.22  Score=37.55  Aligned_cols=29  Identities=14%  Similarity=0.184  Sum_probs=25.5

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhh
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLE   65 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~   65 (142)
                      ..+..+...|++.+|..||++.+|++.|+
T Consensus       251 ~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         251 SEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence            34567888999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=91.66  E-value=0.23  Score=37.18  Aligned_cols=29  Identities=24%  Similarity=0.398  Sum_probs=25.0

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      .+..+...|++.+|.+||++.+|++.|+.
T Consensus       231 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         231 SLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             HHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            45566778999999999999999999874

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=91.64  E-value=0.2  Score=37.33  Aligned_cols=30  Identities=17%  Similarity=0.226  Sum_probs=26.0

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      ..+..+...|++.+|..||++.+++..|+.
T Consensus       224 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         224 ADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            345678889999999999999999999874

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=91.60  E-value=0.25  Score=37.04  Aligned_cols=28  Identities=14%  Similarity=0.339  Sum_probs=24.9

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhh
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLE   65 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~   65 (142)
                      .+..+...|++.+|..||++.+|.+.|+
T Consensus       241 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         241 KIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            4567778999999999999999999986

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=91.59  E-value=0.21  Score=37.59  Aligned_cols=29  Identities=21%  Similarity=0.370  Sum_probs=26.0

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhh
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLE   65 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~   65 (142)
                      ..+..+...|++.+|..||++.+++..|+
T Consensus       248 ~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         248 DKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            45678889999999999999999999986

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=91.52  E-value=0.18  Score=38.47  Aligned_cols=28  Identities=18%  Similarity=0.336  Sum_probs=24.5

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhh
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLE   65 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~   65 (142)
                      .+..+...|.+.+|.+||++.+|++.|.
T Consensus       247 ~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         247 ELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             HHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence            4667888999999999999999998873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=91.43  E-value=0.21  Score=36.98  Aligned_cols=29  Identities=24%  Similarity=0.370  Sum_probs=25.5

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhh
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLE   65 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~   65 (142)
                      ..+..+...|++.+|.+||++.+|++.|+
T Consensus       222 ~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         222 EEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             HHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence            35677888999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=91.43  E-value=0.22  Score=37.23  Aligned_cols=29  Identities=24%  Similarity=0.375  Sum_probs=25.8

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      .+..+...|++.+|.+||++.++...|+.
T Consensus       231 ~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         231 ELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            56778889999999999999999999863

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=91.36  E-value=0.18  Score=38.46  Aligned_cols=31  Identities=16%  Similarity=0.361  Sum_probs=27.4

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      ..+..+...|++.+|..||++.++++.|+..
T Consensus       248 ~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~  278 (288)
T cd05061         248 ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD  278 (288)
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence            4577888899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=91.27  E-value=0.23  Score=38.33  Aligned_cols=32  Identities=16%  Similarity=0.204  Sum_probs=27.0

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      ..+..+...|++.+|..||+|.+|++.|+...
T Consensus       269 ~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~  300 (307)
T cd05098         269 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL  300 (307)
T ss_pred             HHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence            35566788999999999999999999998643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=91.25  E-value=0.19  Score=40.52  Aligned_cols=30  Identities=17%  Similarity=0.483  Sum_probs=25.9

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|++.+|..||++.+|+++|+..
T Consensus       343 ~l~~li~~cl~~dp~~RPs~~~l~~~l~~~  372 (374)
T cd05106         343 EIYSIMKMCWNLEPTERPTFSQISQLIQRQ  372 (374)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            455677799999999999999999999863

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=91.14  E-value=0.25  Score=38.24  Aligned_cols=29  Identities=17%  Similarity=0.415  Sum_probs=26.0

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      .+..+...|++.+|.+||++.+|++.|+.
T Consensus       272 ~~~~li~~cl~~~p~~Rpt~~ell~~l~~  300 (302)
T cd05055         272 EIYDIMKTCWDADPLKRPTFKQIVQLIGK  300 (302)
T ss_pred             HHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence            56678889999999999999999999874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=91.10  E-value=0.27  Score=36.83  Aligned_cols=29  Identities=21%  Similarity=0.413  Sum_probs=25.4

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      .+..+...|++.+|.+||++.++.++|+.
T Consensus       231 ~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         231 ELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             HHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            46677789999999999999999999874

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=91.08  E-value=0.27  Score=37.35  Aligned_cols=29  Identities=17%  Similarity=0.295  Sum_probs=24.9

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      .+..+...|++.+|..||++.+|.++|.+
T Consensus       254 ~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         254 RMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            45567789999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=91.06  E-value=0.29  Score=36.42  Aligned_cols=29  Identities=24%  Similarity=0.402  Sum_probs=25.3

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhh
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLE   65 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~   65 (142)
                      ..+..+...|++.+|.+||++.+|++.|.
T Consensus       228 ~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         228 QDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            35667888999999999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=90.96  E-value=0.24  Score=36.50  Aligned_cols=29  Identities=28%  Similarity=0.455  Sum_probs=25.0

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhh
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLE   65 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~   65 (142)
                      ..+..+...|++.+|.+||++.++++.|+
T Consensus       234 ~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         234 DELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             hHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            35667788899999999999999998874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=90.62  E-value=0.31  Score=36.77  Aligned_cols=30  Identities=23%  Similarity=0.365  Sum_probs=25.8

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      ..+.++...|.+.+|..||++.++.+.|..
T Consensus       235 ~~~~~li~~c~~~~p~~RP~~~~i~~~l~~  264 (266)
T cd05064         235 NLLHQLMLDCWQKERGERPRFSQIHSILSK  264 (266)
T ss_pred             HHHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence            346677889999999999999999998864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=90.59  E-value=0.3  Score=37.15  Aligned_cols=31  Identities=13%  Similarity=0.200  Sum_probs=26.2

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|...+|..||++.++++.|....
T Consensus       239 ~~~~li~~c~~~~p~~Rps~~el~~~l~~~~  269 (279)
T cd05111         239 DVYMVMVKCWMIDENVRPTFKELANEFTRMA  269 (279)
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            3456777999999999999999999987644

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=90.52  E-value=0.29  Score=37.62  Aligned_cols=32  Identities=13%  Similarity=0.168  Sum_probs=27.6

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcccC
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRVA   69 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~   69 (142)
                      .+.++...|++.+|..||++.++++.|+....
T Consensus       246 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~  277 (297)
T cd05089         246 EVYELMRQCWRDRPYERPPFAQISVQLSRMLE  277 (297)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            45678889999999999999999999876554

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=90.17  E-value=0.34  Score=37.59  Aligned_cols=31  Identities=19%  Similarity=0.288  Sum_probs=26.8

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|++.+|..||++.++++.|....
T Consensus       264 ~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~  294 (314)
T cd05099         264 ELYMLMRECWHAVPTQRPTFKQLVEALDKVL  294 (314)
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            4557788999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=90.17  E-value=0.25  Score=40.47  Aligned_cols=31  Identities=13%  Similarity=0.304  Sum_probs=27.2

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      ..+..+...|++.+|..||++.+|+++|+..
T Consensus       367 ~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l  397 (400)
T cd05105         367 QEVYDIMVKCWNSEPEKRPSFLHLSDIVESL  397 (400)
T ss_pred             HHHHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence            3567788999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=90.08  E-value=0.31  Score=37.00  Aligned_cols=28  Identities=14%  Similarity=0.195  Sum_probs=24.8

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhh
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLE   65 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~   65 (142)
                      .+..+...|++.+|.+||++.+|.+.|+
T Consensus       252 ~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         252 EVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence            3557778999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=90.00  E-value=0.38  Score=35.81  Aligned_cols=30  Identities=27%  Similarity=0.420  Sum_probs=26.2

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      ..+..+...|++.+|..||++.++.+.|+.
T Consensus       231 ~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         231 EELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             HHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            356778889999999999999999998874

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=89.82  E-value=0.32  Score=36.09  Aligned_cols=29  Identities=21%  Similarity=0.328  Sum_probs=25.4

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhh
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLE   65 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~   65 (142)
                      ..+..+...|...+|.+||++.+|++.|+
T Consensus       231 ~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         231 AELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             hHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            46677888999999999999999998874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=89.70  E-value=0.31  Score=36.75  Aligned_cols=28  Identities=11%  Similarity=0.414  Sum_probs=23.9

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhh
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLE   65 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~   65 (142)
                      .+..+...|.+.+|.+||++.++++.|+
T Consensus       235 ~~~~li~~cl~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         235 ELADLMTHCMNYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence            4556778999999999999999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=89.29  E-value=0.43  Score=37.40  Aligned_cols=33  Identities=15%  Similarity=0.244  Sum_probs=28.3

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhcccC
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEGRVA   69 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~   69 (142)
                      ..+..+...|++.+|..||+|.++++.|+....
T Consensus       263 ~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~  295 (334)
T cd05100         263 HELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT  295 (334)
T ss_pred             HHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence            356678889999999999999999999986654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=89.02  E-value=0.35  Score=35.79  Aligned_cols=27  Identities=15%  Similarity=0.203  Sum_probs=23.0

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSM   63 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~   63 (142)
                      ..+..+...|++.+|..||++.+|++.
T Consensus       236 ~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         236 SELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             HHHHHHHHHHccCCcccCCCHHHHhhC
Confidence            456678889999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=88.92  E-value=0.41  Score=36.96  Aligned_cols=30  Identities=13%  Similarity=0.224  Sum_probs=26.0

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|++.+|..||++.+++.+|+..
T Consensus       251 ~~~~li~~~l~~~p~~Rp~~~~il~~l~~~  280 (303)
T cd05088         251 EVYDLMRQCWREKPYERPSFAQILVSLNRM  280 (303)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            456788899999999999999999998743

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=88.91  E-value=0.36  Score=39.53  Aligned_cols=30  Identities=17%  Similarity=0.272  Sum_probs=26.0

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|.+.+|..||++.++++.|+..
T Consensus       370 ~l~~li~~cl~~~P~~RPs~~ell~~L~~~  399 (401)
T cd05107         370 EIYEIMQKCWEEKFEIRPDFSQLVHLVGDL  399 (401)
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            455677789999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=88.76  E-value=0.42  Score=35.26  Aligned_cols=28  Identities=25%  Similarity=0.428  Sum_probs=24.0

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHh
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSML   64 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L   64 (142)
                      ..+..+...|+..+|..||++.++++.|
T Consensus       231 ~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      231 PEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            3466688899999999999999998765

Phosphotransferases. Tyrosine-specific kinase subfamily.

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=88.65  E-value=0.49  Score=33.28  Aligned_cols=29  Identities=10%  Similarity=0.156  Sum_probs=25.4

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      .+..+...|++.+|..||++.++++.+..
T Consensus       140 ~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~  168 (176)
T smart00750      140 SFADFMRVCASRLPQRREAANHYLAHCRA  168 (176)
T ss_pred             hHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence            47788889999999999999999987753

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=88.16  E-value=0.56  Score=36.14  Aligned_cols=31  Identities=13%  Similarity=0.212  Sum_probs=26.5

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|...+|..||+|.+++++|+...
T Consensus       239 ~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~  269 (303)
T cd05110         239 DVYMVMVKCWMIDADSRPKFKELAAEFSRMA  269 (303)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            4567788999999999999999999987643

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=87.99  E-value=0.55  Score=36.41  Aligned_cols=31  Identities=10%  Similarity=0.205  Sum_probs=26.6

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|.+.+|..||++.+++..|....
T Consensus       239 ~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~  269 (316)
T cd05108         239 DVYMIMVKCWMIDADSRPKFRELIIEFSKMA  269 (316)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            4667888999999999999999999887543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=87.66  E-value=0.68  Score=34.79  Aligned_cols=28  Identities=29%  Similarity=0.426  Sum_probs=25.3

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhh
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLE   65 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~   65 (142)
                      .+..+...|++.+|..||++.+++..|.
T Consensus       247 ~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         247 RLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            5677889999999999999999999885

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=87.50  E-value=0.66  Score=35.08  Aligned_cols=32  Identities=13%  Similarity=0.197  Sum_probs=26.9

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcccC
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRVA   69 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~   69 (142)
                      .+..+...|++.+|..||++.+++..|+....
T Consensus       239 ~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05109         239 DVYMIMVKCWMIDSECRPRFRELVDEFSRMAR  270 (279)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            45567789999999999999999999876543

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=87.35  E-value=0.6  Score=33.66  Aligned_cols=26  Identities=4%  Similarity=-0.157  Sum_probs=23.3

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      ..+..+...|+..+|.+||++.++++
T Consensus       215 ~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      215 PEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             HHHHHHHHHHccCCchhccCHHHHhh
Confidence            46778899999999999999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=87.11  E-value=0.67  Score=34.79  Aligned_cols=31  Identities=13%  Similarity=0.283  Sum_probs=26.3

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|+..+|..||++.+++..|+...
T Consensus       236 ~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~  266 (270)
T cd05056         236 TLYSLMTKCWAYDPSKRPRFTELKAQLSDIL  266 (270)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            4566777999999999999999999998643

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=86.48  E-value=0.55  Score=35.45  Aligned_cols=25  Identities=4%  Similarity=-0.100  Sum_probs=21.9

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      .+..+...|++.+|.+||++.+|+.
T Consensus       255 ~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         255 DGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHhc
Confidence            4667888999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=86.37  E-value=0.79  Score=34.60  Aligned_cols=27  Identities=11%  Similarity=0.166  Sum_probs=23.0

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSM   63 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~   63 (142)
                      ..+..+...|++.+|..||+|.+|++.
T Consensus       227 ~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         227 KPFKEFVEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            345677788999999999999999874

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=86.33  E-value=0.74  Score=34.03  Aligned_cols=27  Identities=11%  Similarity=0.117  Sum_probs=22.8

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSM   63 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~   63 (142)
                      ..+..+...|++.+|.+||+|.++++.
T Consensus       227 ~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         227 QQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHhhC
Confidence            346778889999999999999998763

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=86.09  E-value=0.66  Score=35.03  Aligned_cols=26  Identities=19%  Similarity=0.446  Sum_probs=22.3

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      ..+..+...|++.+|..||+|.++++
T Consensus       257 ~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         257 GLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             HHHHHHHHHHhcCCcccchhHHHHhc
Confidence            34677888999999999999998875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=86.00  E-value=0.68  Score=34.34  Aligned_cols=25  Identities=16%  Similarity=0.215  Sum_probs=21.5

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      .+..+...|++.+|..||+|.+|++
T Consensus       228 ~~~~li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         228 DLRNLVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             HHHHHHHHHhhCChhhCcCHHHHhh
Confidence            4566777899999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=85.44  E-value=0.96  Score=33.91  Aligned_cols=30  Identities=17%  Similarity=0.142  Sum_probs=25.7

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      ..+.++...|.+.+|.+||++.+|.+.|+.
T Consensus       225 ~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~  254 (257)
T cd05115         225 PEMYALMKDCWIYKWEDRPNFAKVEERMRT  254 (257)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHhh
Confidence            345567889999999999999999999874

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=85.37  E-value=0.63  Score=35.34  Aligned_cols=27  Identities=19%  Similarity=0.199  Sum_probs=23.1

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHh
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSML   64 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L   64 (142)
                      .+..+...|++.+|..||++.+|+++.
T Consensus       241 ~~~~li~~~l~~dp~~Rpt~~e~~~~~  267 (284)
T cd06620         241 DLRDFVDACLLKDPTERPTPQQLCAMP  267 (284)
T ss_pred             HHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence            456677789999999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=85.05  E-value=0.97  Score=34.40  Aligned_cols=25  Identities=16%  Similarity=0.246  Sum_probs=22.1

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      .+..+...|++.+|..||+|.+|++
T Consensus       241 ~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         241 EFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHHh
Confidence            4567888999999999999999886

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=84.58  E-value=1  Score=33.89  Aligned_cols=26  Identities=15%  Similarity=0.082  Sum_probs=22.9

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      ..+..+...|++.+|.+||++.+++.
T Consensus       254 ~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         254 PEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             HHHHHHHHHhcccCcccCCCHHHHhh
Confidence            45778899999999999999999875

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=84.57  E-value=0.96  Score=33.48  Aligned_cols=25  Identities=12%  Similarity=0.145  Sum_probs=21.9

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      .+..+...|++.+|.+||++.++++
T Consensus       229 ~~~~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         229 ELGELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             HHHHHHHHHhccCcccCCCHHHHhc
Confidence            4667888999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=83.92  E-value=0.8  Score=34.54  Aligned_cols=26  Identities=8%  Similarity=0.174  Sum_probs=22.4

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      ..+..+...|++.+|.+||++.+|++
T Consensus       259 ~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         259 SPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             hHHHHHHHHHhccCchhcccHHHHhc
Confidence            45677888999999999999998875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=83.70  E-value=1.2  Score=33.44  Aligned_cols=25  Identities=16%  Similarity=0.226  Sum_probs=21.3

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      .+..+...|++.+|.+||++.+++.
T Consensus       240 ~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         240 EAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             HHHHHHHHHcCCCchhCCCHHHHHh
Confidence            4566778999999999999999875

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=83.69  E-value=1.1  Score=33.68  Aligned_cols=26  Identities=4%  Similarity=-0.037  Sum_probs=22.8

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      ..++.+...|++.+|.+||++.+|++
T Consensus       258 ~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         258 PSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            45678889999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=83.55  E-value=0.92  Score=33.51  Aligned_cols=25  Identities=12%  Similarity=0.171  Sum_probs=21.0

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      .+..+...|++.+|..||++.+|+.
T Consensus       228 ~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         228 EFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             HHHHHHHHHHhcChhhCcCHHHHhc
Confidence            4556667899999999999999875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=83.49  E-value=1.3  Score=33.53  Aligned_cols=26  Identities=15%  Similarity=0.252  Sum_probs=22.1

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHH
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSM   63 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~   63 (142)
                      .+..+...|++.+|.+||++.+|++.
T Consensus       258 ~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         258 EFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             HHHHHHHHHccCCcccCCCHHHHhhc
Confidence            45667788999999999999999864

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=83.42  E-value=1.3  Score=33.36  Aligned_cols=23  Identities=26%  Similarity=0.369  Sum_probs=18.1

Q ss_pred             HHhhhcCCCCCCCCCHHHHHHHhh
Q 032356           42 VALLCADVSHTNRPLMSSVVSMLE   65 (142)
Q Consensus        42 val~C~~~~p~~RPtM~~Vv~~L~   65 (142)
                      +-..|. .+|.+||++.+|++.|.
T Consensus       245 l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         245 VLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             HHHHHh-hCcccCCCHHHHHHHhc
Confidence            334577 46999999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=83.14  E-value=1.3  Score=33.27  Aligned_cols=26  Identities=4%  Similarity=-0.024  Sum_probs=22.7

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      ..+..+...|++.+|..||++.+++.
T Consensus       254 ~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         254 PQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             HHHHHHHHHHhccCcccCcCHHHHhh
Confidence            35678889999999999999999875

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=82.93  E-value=1.7  Score=34.15  Aligned_cols=30  Identities=17%  Similarity=0.272  Sum_probs=25.5

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      +.+.++--+|++.+|..||++.+++..++.
T Consensus       270 e~l~~lik~mlqvdP~qRP~i~~ll~~~d~  299 (302)
T KOG2345|consen  270 EALHQLIKSMLQVDPNQRPTIPELLSKLDD  299 (302)
T ss_pred             HHHHHHHHHHhcCCcccCCCHHHHHHHHHh
Confidence            356677779999999999999999988864

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=82.92  E-value=1.3  Score=32.43  Aligned_cols=25  Identities=12%  Similarity=0.204  Sum_probs=21.2

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      .+..+...|++.+|..||++.+++.
T Consensus       232 ~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         232 EAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             HHHHHHHHhCcCChhhCCCHHHHhh
Confidence            4566677899999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=82.76  E-value=1.1  Score=33.02  Aligned_cols=25  Identities=16%  Similarity=0.353  Sum_probs=21.3

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      .+..+-..|++.+|..||++.+++.
T Consensus       228 ~l~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         228 DLRQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhh
Confidence            3556778999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=82.42  E-value=1.2  Score=31.04  Aligned_cols=27  Identities=7%  Similarity=0.077  Sum_probs=24.0

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSM   63 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~   63 (142)
                      ..+.++...|++.+|..||++.++++.
T Consensus       188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         188 PELKDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence            577888999999999999999998864

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=82.23  E-value=1.3  Score=33.66  Aligned_cols=27  Identities=4%  Similarity=-0.043  Sum_probs=23.4

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSM   63 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~   63 (142)
                      ..+.++...|++.+|..||++.+|+..
T Consensus       256 ~~~~~li~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         256 DDALDLLQRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             HHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            356678889999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=81.78  E-value=1.4  Score=33.05  Aligned_cols=26  Identities=4%  Similarity=-0.079  Sum_probs=22.4

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      ..+..+...|++.+|.+||++.++++
T Consensus       253 ~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         253 AEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             HHHHHHHHHHhccCcccccCHHHHhh
Confidence            45677888999999999999998875

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=81.10  E-value=2.5  Score=32.95  Aligned_cols=27  Identities=30%  Similarity=0.432  Sum_probs=23.2

Q ss_pred             HHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           36 AMVMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        36 l~~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      -..+..+...|++.+|..||++.+|++
T Consensus       281 ~~~~~~li~~~l~~dP~~Rpta~e~l~  307 (328)
T cd08226         281 SPAFQNLVELCLQQDPEKRPSASSLLS  307 (328)
T ss_pred             hHHHHHHHHHHccCCcccCCCHHHHhh
Confidence            345678888999999999999999874

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=80.68  E-value=1.5  Score=32.39  Aligned_cols=24  Identities=21%  Similarity=0.324  Sum_probs=20.0

Q ss_pred             HHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           39 MINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        39 ~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      +..+-..|++.+|.+||++.+|++
T Consensus       230 ~~~~i~~~l~~~p~~Rpt~~~ll~  253 (257)
T cd08225         230 LRSLISQLFKVSPRDRPSITSILK  253 (257)
T ss_pred             HHHHHHHHhccChhhCcCHHHHhh
Confidence            455567899999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=80.57  E-value=1.4  Score=32.07  Aligned_cols=25  Identities=12%  Similarity=0.254  Sum_probs=21.1

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      .+..+...|++.+|..||++.+|++
T Consensus       226 ~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         226 EFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhc
Confidence            4566777999999999999998875

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=80.47  E-value=1.7  Score=32.56  Aligned_cols=25  Identities=16%  Similarity=0.300  Sum_probs=21.0

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      .+..+-..|++.+|.+||++.+|++
T Consensus       244 ~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         244 KFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHhh
Confidence            4556677999999999999998875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=80.47  E-value=1.9  Score=33.79  Aligned_cols=32  Identities=9%  Similarity=0.046  Sum_probs=25.4

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHH--hhcccC
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSM--LEGRVA   69 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~--L~~~~~   69 (142)
                      .+..+...|++.+|.+||++.++++.  +.....
T Consensus       266 ~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~  299 (337)
T cd07858         266 LAIDLLEKMLVFDPSKRITVEEALAHPYLASLHD  299 (337)
T ss_pred             HHHHHHHHHhcCChhhccCHHHHHcCcchhhhcC
Confidence            45678889999999999999999864  554333

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=80.46  E-value=1.5  Score=32.64  Aligned_cols=25  Identities=16%  Similarity=0.276  Sum_probs=21.4

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      .+..+-..|+..+|..||++.++++
T Consensus       247 ~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         247 KFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             HHHHHHHHHhhcChhhCcCHHHHhc
Confidence            4556778899999999999999875

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=80.45  E-value=1.8  Score=32.42  Aligned_cols=22  Identities=23%  Similarity=0.385  Sum_probs=17.8

Q ss_pred             HhhhcCCCCCCCCCHHHHHHHhh
Q 032356           43 ALLCADVSHTNRPLMSSVVSMLE   65 (142)
Q Consensus        43 al~C~~~~p~~RPtM~~Vv~~L~   65 (142)
                      --.|. .+|.+||++.+|++.|+
T Consensus       247 ~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         247 MQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             HHHHh-cCcccCCCHHHHHHHhc
Confidence            34565 47999999999999885

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=80.36  E-value=1.8  Score=32.69  Aligned_cols=27  Identities=11%  Similarity=0.161  Sum_probs=22.8

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSM   63 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~   63 (142)
                      ..+..+...|++.+|..||++.+|+..
T Consensus       227 ~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         227 KPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             HHHHHHHHHHcccCcccCcCHHHHHhC
Confidence            456678889999999999999999654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=80.04  E-value=1.6  Score=32.29  Aligned_cols=27  Identities=15%  Similarity=0.174  Sum_probs=22.3

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHh
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSML   64 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L   64 (142)
                      .+..+...|++.+|.+||++.++++.+
T Consensus       228 ~~~~~i~~~l~~~p~~R~s~~~ll~~~  254 (256)
T cd08221         228 ELISLVHSLLQQDPEKRPTADEVLDQP  254 (256)
T ss_pred             HHHHHHHHHcccCcccCCCHHHHhhCc
Confidence            455677789999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=80.01  E-value=1.6  Score=32.76  Aligned_cols=25  Identities=12%  Similarity=0.173  Sum_probs=21.4

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      .+..+...|++.+|..||++.+++.
T Consensus       258 ~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         258 PALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             HHHHHHHHHhcCCccccCCHHHHhc
Confidence            4567888999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=80.01  E-value=1.7  Score=32.59  Aligned_cols=25  Identities=20%  Similarity=0.433  Sum_probs=20.8

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      .+..+...|++.+|..||+|.+|++
T Consensus       244 ~~~~li~~~l~~~p~~Rps~~~il~  268 (272)
T cd06629         244 VALDFLNACFTINPDNRPTARELLQ  268 (272)
T ss_pred             HHHHHHHHHhcCChhhCCCHHHHhh
Confidence            4455667899999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	142
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		3e-06
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		4e-06

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 34/61 (55%)
Query: 6   LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
           L D+   L ++  L  LVD  L  N+ +E+   +I VALLC   S   RP MS VV MLE
Sbjct: 256 LLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
Query: 66  G 66
           G
Sbjct: 316 G 316

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 34/61 (55%)
Query: 6   LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
           L D+   L ++  L  LVD  L  N+ +E+   +I VALLC   S   RP MS VV MLE
Sbjct: 248 LLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
Query: 66  G 66
           G
Sbjct: 308 G 308

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	142
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	3e-21
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	4e-15
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	6e-15

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 86.1 bits (214), Expect = 3e-21
 Identities = 27/61 (44%), Positives = 34/61 (55%)

Query: 6   LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
           L D+   L ++  L  LVD  L  N+ +E+   +I VALLC   S   RP MS VV MLE
Sbjct: 248 LLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307

Query: 66  G 66
           G
Sbjct: 308 G 308

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 69.2 bits (170), Expect = 4e-15
 Identities = 18/67 (26%), Positives = 32/67 (47%)

Query: 6   LFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLE 65
           L ++A+     G L ++VDP+L      E      + A+ C  +S  +RP M  V+  LE
Sbjct: 252 LAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311

Query: 66  GRVAVPD 72
             + + +
Sbjct: 312 YALRLQE 318

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 68.7 bits (169), Expect = 6e-15
 Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 2/65 (3%)

Query: 6   LFDYAL-VLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSML 64
           L D    +  E+  + + +D  +  +        M +VA  C       RP +  V  +L
Sbjct: 243 LLDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301

Query: 65  EGRVA 69
           +   A
Sbjct: 302 QEMTA 306

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	142
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	97.76
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	97.52
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	95.93
4aoj_A	329	High affinity nerve growth factor receptor; transf	95.85
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	95.38
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	95.06
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	94.95
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	94.81
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	94.32
3q4u_A	301	Activin receptor type-1; structural genomics conso	93.71
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	93.66
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	93.65
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	93.53
3soc_A	322	Activin receptor type-2A; structural genomics cons	93.5
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	93.35
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	92.9
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	92.89
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	92.79
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	92.73
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	92.66
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	92.52
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	92.5
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	92.49
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	92.4
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	92.37
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	92.33
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	92.05
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	91.89
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	91.88
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	91.84
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	91.74
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	91.71
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	91.59
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	91.58
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	91.56
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	91.55
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	91.5
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	91.48
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	91.47
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	91.43
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	91.3
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	91.28
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	91.27
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	91.27
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	91.27
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	91.26
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	91.23
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	91.22
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	90.98
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	90.95
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	90.91
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	90.82
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	90.81
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	90.73
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	90.71
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	90.65
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	90.53
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	90.5
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	90.45
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	90.37
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	90.35
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	90.32
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	90.31
3pls_A	298	Macrophage-stimulating protein receptor; protein k	90.28
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	90.27
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	90.24
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	89.97
2a19_B	284	Interferon-induced, double-stranded RNA-activated	89.69
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	89.56
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	89.55
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	89.5
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	89.4
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	89.38
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	89.29
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	89.11
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	89.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	88.69
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	88.6
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	88.49
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	88.45
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	88.2
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	87.56
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	87.05
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	86.79
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	86.61
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	85.41
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	85.39
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	83.99
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	83.24
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	82.85
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	82.64
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	82.56
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	82.35
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	81.32
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	80.97
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	80.95
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	80.8
3fme_A	290	Dual specificity mitogen-activated protein kinase;	80.72
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	80.69
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	80.66
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	80.22
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	80.17

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=97.76  E-value=4.5e-05  Score=58.20  Aligned_cols=66  Identities=41%  Similarity=0.548  Sum_probs=54.1

Q ss_pred             ccHHHHHHHHHhcCCccceecCccCCCchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHhhcccC
Q 032356            4 LPLFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLEGRVA   69 (142)
Q Consensus         4 ~~L~~wv~~~~~~~~~~eivD~~L~~~~~~~~l~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~   69 (142)
                      ..+.+|+........+..+++..+...+.......+..+...|++.+|.+||++.+|+++|++...
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~  311 (326)
T 3uim_A          246 VMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL  311 (326)
T ss_dssp             SBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred             hhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence            346677766666666677788887777778888899999999999999999999999999997543

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=97.52  E-value=0.00014  Score=55.49  Aligned_cols=67  Identities=27%  Similarity=0.393  Sum_probs=53.4

Q ss_pred             cHHHHHHHHHhcCCccceecCccCCCchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHhhcccCCC
Q 032356            5 PLFDYALVLKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLEGRVAVP   71 (142)
Q Consensus         5 ~L~~wv~~~~~~~~~~eivD~~L~~~~~~~~l~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~~~   71 (142)
                      .+..|+......+.+..++++.+......+....+..+...|++.+|.+||++.+|++.|+....+.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~  317 (321)
T 2qkw_B          251 NLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ  317 (321)
T ss_dssp             CHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             HHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence            4566766666666677778887766666777788889999999999999999999999998765443

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=95.93  E-value=0.0055  Score=46.96  Aligned_cols=35  Identities=17%  Similarity=0.094  Sum_probs=30.2

Q ss_pred             HHHHHHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           34 EQAMVMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        34 ~~l~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      +....+.++...|.+.+|..||+|.+|++.|+...
T Consensus       262 ~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~  296 (303)
T 3hmm_A          262 EALRVMAKIMRECWYANGAARLTALRIKKTLSQLS  296 (303)
T ss_dssp             HHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence            45567788999999999999999999999997643

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=95.85  E-value=0.0047  Score=48.16  Aligned_cols=33  Identities=12%  Similarity=0.108  Sum_probs=28.5

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcccCC
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRVAV   70 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~~   70 (142)
                      .+..+...|.+.+|.+||+|.+|+++|+.....
T Consensus       288 ~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~  320 (329)
T 4aoj_A          288 EVYAIMRGCWQREPQQRHSIKDVHARLQALAQA  320 (329)
T ss_dssp             HHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence            456778899999999999999999999976654

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=95.38  E-value=0.011  Score=45.61  Aligned_cols=30  Identities=17%  Similarity=0.251  Sum_probs=26.7

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+.++...|.+.+|.+||+|.+|++.|+..
T Consensus       275 ~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          275 WVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            466788899999999999999999999854

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=95.06  E-value=0.025  Score=42.27  Aligned_cols=37  Identities=22%  Similarity=0.291  Sum_probs=31.1

Q ss_pred             hHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           32 VEEQAMVMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        32 ~~~~l~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .......+..+...|++.+|..||++.+|++.|+...
T Consensus       269 ~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          269 DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             CHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred             chHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            3445567788999999999999999999999998643

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=94.95  E-value=0.021  Score=44.10  Aligned_cols=30  Identities=23%  Similarity=0.380  Sum_probs=26.0

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|.+.+|.+||+|.+|++.|+..
T Consensus       269 ~l~~li~~cl~~dP~~RPs~~ei~~~Le~l  298 (307)
T 3omv_A          269 AMKRLVADCVKKVKEERPLFPQILSSIELL  298 (307)
T ss_dssp             HHHHHHHHHTCSSSTTSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            456677899999999999999999998754

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=94.32  E-value=0.027  Score=43.26  Aligned_cols=31  Identities=13%  Similarity=0.190  Sum_probs=26.9

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+.++...|.+.+|.+||+|.+|+++|+...
T Consensus       258 ~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~  288 (299)
T 4asz_A          258 EVYELMLGCWQREPHMRKNIKGIHTLLQNLA  288 (299)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            4567788999999999999999999998643

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=93.71  E-value=0.048  Score=40.39  Aligned_cols=32  Identities=9%  Similarity=0.030  Sum_probs=28.3

Q ss_pred             HHHHHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           35 QAMVMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        35 ~l~~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      ....+.++...|++.+|.+||++.+|++.|+.
T Consensus       268 ~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~  299 (301)
T 3q4u_A          268 TLTSLAKLMKECWYQNPSARLTALRIKKTLTK  299 (301)
T ss_dssp             HHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence            44567888999999999999999999999975

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=93.66  E-value=0.032  Score=42.30  Aligned_cols=36  Identities=11%  Similarity=0.126  Sum_probs=27.1

Q ss_pred             HHHHHhhhcCCCCCCCCCHHHHHHHhhcccCCCCCC
Q 032356           39 MINVALLCADVSHTNRPLMSSVVSMLEGRVAVPDFI   74 (142)
Q Consensus        39 ~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~~~~~~   74 (142)
                      +..+...|++.+|.+||++.++++.|+.......++
T Consensus       268 l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~  303 (309)
T 3p86_A          268 VAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP  303 (309)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-----
T ss_pred             HHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCC
Confidence            556777899999999999999999998766543333

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=93.65  E-value=0.04  Score=41.52  Aligned_cols=36  Identities=17%  Similarity=0.010  Sum_probs=30.6

Q ss_pred             HHHHHHHHHHhhhcCCCCCCCCCHHHHHHHhhcccC
Q 032356           34 EQAMVMINVALLCADVSHTNRPLMSSVVSMLEGRVA   69 (142)
Q Consensus        34 ~~l~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~   69 (142)
                      +....+..+...|++.+|.+||++.+|++.|+....
T Consensus       296 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~  331 (337)
T 3mdy_A          296 ECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE  331 (337)
T ss_dssp             HHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence            445567888899999999999999999999987554

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=93.53  E-value=0.057  Score=40.84  Aligned_cols=35  Identities=17%  Similarity=0.094  Sum_probs=30.2

Q ss_pred             HHHHHHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           34 EQAMVMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        34 ~~l~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      +....+.++...|++.+|.+||++.+|++.|+...
T Consensus       301 ~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~  335 (342)
T 1b6c_B          301 EALRVMAKIMRECWYANGAARLTALRIKKTLSQLS  335 (342)
T ss_dssp             HHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence            44567788999999999999999999999998643

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=93.50  E-value=0.058  Score=40.88  Aligned_cols=33  Identities=12%  Similarity=0.038  Sum_probs=28.4

Q ss_pred             HHHHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           36 AMVMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        36 l~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      ...+..+...|++.+|.+||++.+|++.|+...
T Consensus       285 ~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~  317 (322)
T 3soc_A          285 MAMLCETIEECWDHDAEARLSAGCVGERITQMQ  317 (322)
T ss_dssp             HHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            345778889999999999999999999998643

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=93.35  E-value=0.047  Score=42.90  Aligned_cols=30  Identities=27%  Similarity=0.318  Sum_probs=25.6

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|.+.+|.+||++.+|++.|+..
T Consensus       316 ~~~~li~~c~~~dP~~RPt~~eil~~L~~l  345 (353)
T 4ase_A          316 EMYQTMLDCWHGEPSQRPTFSELVEHLGNL  345 (353)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence            355667789999999999999999998754

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=92.90  E-value=0.082  Score=39.52  Aligned_cols=32  Identities=22%  Similarity=0.451  Sum_probs=26.2

Q ss_pred             HHHHHhhhcCCCCCCCCCHHHHHHHhhcccCC
Q 032356           39 MINVALLCADVSHTNRPLMSSVVSMLEGRVAV   70 (142)
Q Consensus        39 ~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~~   70 (142)
                      +..+...|+..+|.+||++.+|+++|+.....
T Consensus       272 l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~  303 (319)
T 2y4i_B          272 ISDILLFCWAFEQEERPTFTKLMDMLEKLPKR  303 (319)
T ss_dssp             HHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred             HHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence            55677899999999999999999999876543

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=92.89  E-value=0.068  Score=40.60  Aligned_cols=32  Identities=9%  Similarity=0.225  Sum_probs=27.3

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      ..+..+...|++.+|.+||++.+|++.|+...
T Consensus       246 ~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~  277 (327)
T 3poz_A          246 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             HHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            34667888999999999999999999987543

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=92.79  E-value=0.074  Score=38.80  Aligned_cols=29  Identities=14%  Similarity=0.275  Sum_probs=25.5

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      .+..+...|++.+|.+||++.++++.|+.
T Consensus       242 ~~~~li~~~l~~~p~~Rps~~e~l~~L~~  270 (271)
T 3dtc_A          242 PFAKLMEDCWNPDPHSRPSFTNILDQLTT  270 (271)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred             HHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence            45677788999999999999999999974

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=92.73  E-value=0.083  Score=38.53  Aligned_cols=32  Identities=16%  Similarity=0.259  Sum_probs=27.4

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcccC
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRVA   69 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~   69 (142)
                      .+..+...|++.+|.+||++.++++.|+....
T Consensus       233 ~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (268)
T 3sxs_A          233 TIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE  264 (268)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence            35667789999999999999999999987653

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=92.66  E-value=0.055  Score=41.21  Aligned_cols=33  Identities=24%  Similarity=0.429  Sum_probs=28.2

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcccCC
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRVAV   70 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~~   70 (142)
                      .+..+...|++.+|.+||++.+|++.|+.....
T Consensus       282 ~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~  314 (325)
T 3kul_A          282 ALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS  314 (325)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence            456778899999999999999999999876543

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=92.52  E-value=0.078  Score=40.08  Aligned_cols=32  Identities=22%  Similarity=0.241  Sum_probs=26.6

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcccC
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRVA   69 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~   69 (142)
                      .+.++...|++.+|.+||++.++++.|+....
T Consensus       272 ~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  303 (327)
T 3lxl_A          272 EVHELMKLCWAPSPQDRPSFSALGPQLDMLWS  303 (327)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            45677788999999999999999999987543

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=92.50  E-value=0.081  Score=39.23  Aligned_cols=31  Identities=10%  Similarity=0.145  Sum_probs=26.6

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|++.+|.+||++.++++.|+...
T Consensus       260 ~l~~li~~~l~~dp~~Rps~~el~~~L~~l~  290 (295)
T 3ugc_A          260 EIYMIMTECWNNNVNQRPSFRDLALRVDQIR  290 (295)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            4566778999999999999999999998643

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=92.49  E-value=0.079  Score=41.33  Aligned_cols=32  Identities=25%  Similarity=0.477  Sum_probs=27.6

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      ..+..+...|++.+|.+||++.+|+++|+...
T Consensus       277 ~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~  308 (373)
T 2qol_A          277 AALYQLMLDCWQKDRNNRPKFEQIVSILDKLI  308 (373)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence            34677888999999999999999999998654

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=92.40  E-value=0.12  Score=38.05  Aligned_cols=31  Identities=10%  Similarity=0.228  Sum_probs=27.0

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|++.+|.+||++.+|++.|+...
T Consensus       249 ~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~  279 (296)
T 3uzp_A          249 EFATYLNFCRSLRFDDKPDYSYLRQLFRNLF  279 (296)
T ss_dssp             HHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCcCcCCCHHHHHHHHHHHH
Confidence            4667888999999999999999999998644

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=92.37  E-value=0.096  Score=39.36  Aligned_cols=32  Identities=16%  Similarity=0.303  Sum_probs=26.9

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcccC
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRVA   69 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~   69 (142)
                      .+..+...|++.+|.+||++.++++.|+....
T Consensus       232 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  263 (307)
T 2eva_A          232 PIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR  263 (307)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence            35567788999999999999999999986543

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=92.33  E-value=0.093  Score=38.90  Aligned_cols=31  Identities=16%  Similarity=0.300  Sum_probs=26.8

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|++.+|.+||++.+++++|+...
T Consensus       257 ~l~~li~~~l~~~p~~Rps~~ell~~L~~l~  287 (289)
T 3og7_A          257 RMKRLMAECLKKKRDERPSFPRILAEIEELA  287 (289)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence            4567778999999999999999999998643

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=92.05  E-value=0.14  Score=37.61  Aligned_cols=31  Identities=10%  Similarity=0.228  Sum_probs=26.9

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|++.+|.+||++.+|++.|+...
T Consensus       249 ~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~  279 (296)
T 4hgt_A          249 EFATYLNFCRSLRFDDKPDYSYLRQLFRNLF  279 (296)
T ss_dssp             HHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence            4667788999999999999999999997644

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=91.89  E-value=0.099  Score=39.45  Aligned_cols=30  Identities=13%  Similarity=0.315  Sum_probs=26.2

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|++.+|.+||++.++++.|+..
T Consensus       279 ~l~~li~~~l~~dP~~Rps~~ell~~L~~l  308 (318)
T 3lxp_A          279 EVYHLMKNCWETEASFRPTFENLIPILKTV  308 (318)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            456777899999999999999999999864

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=91.88  E-value=0.12  Score=38.95  Aligned_cols=34  Identities=9%  Similarity=0.007  Sum_probs=29.1

Q ss_pred             HHHHHHHHhhhcCCCCCCCCCHHHHHHHhhcccC
Q 032356           36 AMVMINVALLCADVSHTNRPLMSSVVSMLEGRVA   69 (142)
Q Consensus        36 l~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~   69 (142)
                      ...+..+...|++.+|.+||++.+|++.|+....
T Consensus       285 ~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~  318 (336)
T 3g2f_A          285 VRSLKETIEDCWDQDAEARLTAQXAEERMAELMM  318 (336)
T ss_dssp             HHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHH
Confidence            3457788899999999999999999999987553

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=91.84  E-value=0.099  Score=39.81  Aligned_cols=30  Identities=27%  Similarity=0.318  Sum_probs=26.0

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|++.+|.+||++.+|++.|+..
T Consensus       324 ~l~~li~~~l~~dP~~Rps~~ell~~L~~~  353 (359)
T 3vhe_A          324 EMYQTMLDCWHGEPSQRPTFSELVEHLGNL  353 (359)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence            356677889999999999999999999854

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=91.74  E-value=0.21  Score=39.94  Aligned_cols=32  Identities=16%  Similarity=0.274  Sum_probs=27.6

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcccC
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRVA   69 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~   69 (142)
                      .+..+...|++.+|.+||++.++++.|+....
T Consensus       409 ~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~  440 (452)
T 1fmk_A          409 SLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  440 (452)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence            45567789999999999999999999997654

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=91.71  E-value=0.12  Score=38.14  Aligned_cols=29  Identities=31%  Similarity=0.366  Sum_probs=25.4

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      .+..+...|++.+|.+||++.+|++.|+.
T Consensus       258 ~l~~li~~~l~~dp~~Rps~~~ll~~L~~  286 (287)
T 4f0f_A          258 RLRNVIELCWSGDPKKRPHFSYIVKELSE  286 (287)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence            45667788999999999999999999974

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=91.59  E-value=0.05  Score=40.72  Aligned_cols=33  Identities=15%  Similarity=0.241  Sum_probs=27.4

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcccCC
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRVAV   70 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~~   70 (142)
                      .+..+...|++.+|..||++.+|++.|+.....
T Consensus       266 ~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~  298 (310)
T 2wqm_A          266 ELRQLVNMCINPDPEKRPDVTYVYDVAKRMHAC  298 (310)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence            355677789999999999999999999865543

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=91.58  E-value=0.1  Score=38.97  Aligned_cols=31  Identities=19%  Similarity=0.372  Sum_probs=26.8

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|++.+|.+||++.++++.|+...
T Consensus       251 ~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~  281 (310)
T 3s95_A          251 SFFPITVRCCDLDPEKRPSFVKLEHWLETLR  281 (310)
T ss_dssp             THHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            3567888999999999999999999998654

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=91.56  E-value=0.11  Score=37.58  Aligned_cols=31  Identities=19%  Similarity=0.387  Sum_probs=25.9

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|++.+|.+||++.++++.|+...
T Consensus       239 ~~~~li~~~l~~~p~~Rps~~~il~~L~~l~  269 (271)
T 3kmu_A          239 HVSKLMKICMNEDPAKRPKFDMIVPILEKMQ  269 (271)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            3556667899999999999999999998643

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=91.55  E-value=0.17  Score=37.40  Aligned_cols=29  Identities=28%  Similarity=0.337  Sum_probs=25.6

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      .+..+...|++.+|.+||++.+|++.|+.
T Consensus       248 ~l~~li~~~l~~dp~~Rps~~~l~~~L~~  276 (291)
T 1xbb_A          248 EMYDLMNLCWTYDVENRPGFAAVELRLRN  276 (291)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            45667789999999999999999999975

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=91.50  E-value=0.12  Score=39.01  Aligned_cols=30  Identities=10%  Similarity=0.172  Sum_probs=26.2

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|++.+|.+||++.+|++.|+..
T Consensus       291 ~l~~li~~cl~~dP~~Rps~~el~~~L~~l  320 (326)
T 2w1i_A          291 EIYMIMTECWNNNVNQRPSFRDLALRVDQI  320 (326)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            456677899999999999999999999754

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=91.48  E-value=0.14  Score=37.78  Aligned_cols=31  Identities=3%  Similarity=0.076  Sum_probs=26.9

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|++.+|.+||++.+|++.|+...
T Consensus       252 ~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~  282 (298)
T 1csn_A          252 EFYKYMHYARNLAFDATPDYDYLQGLFSKVL  282 (298)
T ss_dssp             HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCcccCCCHHHHHHHHHHHH
Confidence            4667888999999999999999999998654

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=91.47  E-value=0.17  Score=38.47  Aligned_cols=32  Identities=19%  Similarity=0.463  Sum_probs=27.2

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcccC
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRVA   69 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~   69 (142)
                      .+..+...|++.+|..||++.+|++.|+....
T Consensus       278 ~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~  309 (333)
T 1mqb_A          278 AIYQLMMQCWQQERARRPKFADIVSILDKLIR  309 (333)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            45677889999999999999999999986543

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=91.43  E-value=0.16  Score=37.95  Aligned_cols=31  Identities=19%  Similarity=0.209  Sum_probs=26.9

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|++.+|.+||++.+|++.|+...
T Consensus       275 ~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~  305 (317)
T 2buj_A          275 ALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ  305 (317)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred             HHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence            4566778899999999999999999998654

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=91.28  E-value=0.32  Score=37.04  Aligned_cols=31  Identities=6%  Similarity=0.144  Sum_probs=26.8

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|++.+|.+||++.+|++.|+...
T Consensus       297 ~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          297 EIAQFLVCAHSLAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             HHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred             HHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence            4666778999999999999999999998643

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=91.27  E-value=0.14  Score=37.96  Aligned_cols=30  Identities=13%  Similarity=0.252  Sum_probs=26.2

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|++.+|.+||++.++++.|+..
T Consensus       271 ~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  300 (302)
T 4e5w_A          271 EVYQLMRKCWEFQPSNRTSFQNLIEGFEAL  300 (302)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence            466778899999999999999999999753

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=91.27  E-value=0.14  Score=37.55  Aligned_cols=31  Identities=23%  Similarity=0.329  Sum_probs=26.5

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|++.+|.+||++.++++.|+...
T Consensus       238 ~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  268 (279)
T 1qpc_A          238 ELYQLMRLCWKERPEDRPTFDYLRSVLEDFF  268 (279)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence            4566778899999999999999999998643

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=91.27  E-value=0.13  Score=37.56  Aligned_cols=30  Identities=17%  Similarity=0.264  Sum_probs=25.8

Q ss_pred             HHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           39 MINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        39 ~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      +..+...|++.+|.+||++.++++.|+...
T Consensus       236 ~~~li~~~l~~~p~~Rps~~~ll~~l~~l~  265 (269)
T 4hcu_A          236 VYQIMNHCWRERPEDRPAFSRLLRQLAEIA  265 (269)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHccCCcccCcCHHHHHHHHHHHH
Confidence            556777899999999999999999998643

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=91.26  E-value=0.14  Score=38.11  Aligned_cols=31  Identities=23%  Similarity=0.504  Sum_probs=26.5

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|++.+|.+||++.++++.|+...
T Consensus       276 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  306 (313)
T 1t46_A          276 EMYDIMKTCWDADPLKRPTFKQIVQLIEKQI  306 (313)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence            4566778999999999999999999998643

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=91.23  E-value=0.14  Score=37.11  Aligned_cols=31  Identities=16%  Similarity=0.234  Sum_probs=26.5

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|++.+|.+||++.++++.|+...
T Consensus       233 ~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~  263 (267)
T 3t9t_A          233 HVYQIMNHCWRERPEDRPAFSRLLRQLAEIA  263 (267)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            3566778999999999999999999998643

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=91.22  E-value=0.14  Score=38.66  Aligned_cols=30  Identities=20%  Similarity=0.430  Sum_probs=25.9

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|++.+|..||++.+|++.|+..
T Consensus       295 ~l~~li~~~l~~~p~~Rps~~~l~~~L~~~  324 (333)
T 2i1m_A          295 NIYSIMQACWALEPTHRPTFQQICSFLQEQ  324 (333)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence            456677899999999999999999999753

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=90.98  E-value=0.16  Score=38.36  Aligned_cols=32  Identities=22%  Similarity=0.352  Sum_probs=27.4

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcccC
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRVA   69 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~   69 (142)
                      .+..+...|++.+|.+||++.+|++.|+....
T Consensus       304 ~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~  335 (343)
T 1luf_A          304 ELYNLMRLCWSKLPADRPSFCSIHRILQRMCE  335 (343)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence            45667789999999999999999999987543

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=90.95  E-value=0.14  Score=37.85  Aligned_cols=31  Identities=26%  Similarity=0.328  Sum_probs=26.7

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|++.+|.+||++.++++.|+...
T Consensus       260 ~l~~li~~~l~~~p~~Rps~~ell~~L~~~~  290 (298)
T 3f66_A          260 PLYEVMLKCWHPKAEMRPSFSELVSRISAIF  290 (298)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            3566778899999999999999999998654

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=90.91  E-value=0.25  Score=39.45  Aligned_cols=32  Identities=19%  Similarity=0.336  Sum_probs=27.6

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcccC
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRVA   69 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~   69 (142)
                      .+..+...|++.+|.+||++.+|+++|+....
T Consensus       413 ~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~  444 (454)
T 1qcf_A          413 ELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT  444 (454)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred             HHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence            45677789999999999999999999987543

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=90.82  E-value=0.15  Score=37.91  Aligned_cols=30  Identities=23%  Similarity=0.375  Sum_probs=26.2

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|++.+|.+||++.++++.|+..
T Consensus       280 ~~~~li~~~l~~dp~~Rps~~~l~~~l~~~  309 (314)
T 2ivs_A          280 EMYRLMLQCWKQEPDKRPVFADISKDLEKM  309 (314)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            456777899999999999999999999864

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=90.81  E-value=0.2  Score=38.25  Aligned_cols=31  Identities=10%  Similarity=0.149  Sum_probs=26.5

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|++.+|.+||++.+|+++|+...
T Consensus       305 ~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  335 (352)
T 2jii_A          305 TLQKYLKVVMALTYEEKPPYAMLRNNLEALL  335 (352)
T ss_dssp             HHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCChhhCCCHHHHHHHHHHHH
Confidence            4566777899999999999999999998654

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=90.73  E-value=0.17  Score=37.21  Aligned_cols=31  Identities=19%  Similarity=0.273  Sum_probs=26.7

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|++.+|.+||++.++++.|+...
T Consensus       253 ~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  283 (291)
T 1u46_A          253 DIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ  283 (291)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence            4566778899999999999999999998644

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=90.71  E-value=0.16  Score=39.48  Aligned_cols=33  Identities=21%  Similarity=0.278  Sum_probs=27.9

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcccCC
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRVAV   70 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~~   70 (142)
                      .+..+...|++.+|.+||++.+|++.|+.....
T Consensus       321 ~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  353 (382)
T 3tt0_A          321 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL  353 (382)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            456677889999999999999999999876543

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=90.65  E-value=0.17  Score=37.15  Aligned_cols=30  Identities=23%  Similarity=0.421  Sum_probs=25.8

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|++.+|.+||++.++++.|+..
T Consensus       242 ~l~~li~~~l~~~p~~Rps~~ell~~L~~~  271 (281)
T 3cc6_A          242 VLYTLMTRCWDYDPSDRPRFTELVCSLSDV  271 (281)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence            356677899999999999999999999754

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=90.53  E-value=0.17  Score=39.31  Aligned_cols=30  Identities=17%  Similarity=0.272  Sum_probs=25.9

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|.+.+|.+||++.+|++.|+..
T Consensus       343 ~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  372 (377)
T 3cbl_A          343 AVFRLMEQCWAYEPGQRPSFSTIYQELQSI  372 (377)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence            455677899999999999999999999754

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=90.50  E-value=0.19  Score=40.71  Aligned_cols=31  Identities=13%  Similarity=0.261  Sum_probs=26.8

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|++.+|.+||++.+|++.|+...
T Consensus       447 ~l~~li~~cl~~dP~~RPs~~el~~~L~~~~  477 (495)
T 1opk_A          447 KVYELMRACWQWNPSDRPSFAEIHQAFETMF  477 (495)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             HHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence            4556778999999999999999999998654

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=90.45  E-value=0.17  Score=37.66  Aligned_cols=30  Identities=27%  Similarity=0.318  Sum_probs=25.8

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|++.+|.+||++.+|++.|+..
T Consensus       279 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~  308 (316)
T 2xir_A          279 EMYQTMLDCWHGEPSQRPTFSELVEHLGNL  308 (316)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            356677789999999999999999999754

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=90.37  E-value=0.19  Score=36.89  Aligned_cols=30  Identities=13%  Similarity=0.215  Sum_probs=25.9

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|++.+|.+||++.++++.|+..
T Consensus       249 ~l~~li~~~l~~~p~~Rps~~~ll~~L~~~  278 (283)
T 3gen_A          249 KVYTIMYSCWHEKADERPTFKILLSNILDV  278 (283)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            456677899999999999999999999754

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=90.35  E-value=0.19  Score=36.92  Aligned_cols=29  Identities=14%  Similarity=0.297  Sum_probs=25.5

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      .+..+...|++.+|.+||++.+|++.|+.
T Consensus       240 ~l~~li~~~l~~dp~~Rps~~~~~~~l~~  268 (288)
T 3kfa_A          240 KVYELMRACWQWNPSDRPSFAEIHQAFET  268 (288)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCChhhCcCHHHHHHHHHH
Confidence            45677788999999999999999999975

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=90.32  E-value=0.18  Score=37.00  Aligned_cols=30  Identities=20%  Similarity=0.228  Sum_probs=25.7

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|++.+|.+||++.++++.|+..
T Consensus       242 ~l~~li~~~l~~~p~~Rps~~~l~~~L~~i  271 (278)
T 1byg_A          242 AVYEVMKNCWHLDAAMRPSFLQLREQLEHI  271 (278)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCChhhCCCHHHHHHHHHHH
Confidence            355666789999999999999999999864

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=90.31  E-value=0.14  Score=37.64  Aligned_cols=31  Identities=19%  Similarity=0.378  Sum_probs=26.2

Q ss_pred             HHHHHhhhcCCCCCCCCCHHHHHHHhhcccC
Q 032356           39 MINVALLCADVSHTNRPLMSSVVSMLEGRVA   69 (142)
Q Consensus        39 ~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~   69 (142)
                      +..+...|++.+|.+||++.++++.|+....
T Consensus       245 l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~  275 (289)
T 4fvq_A          245 LANLINNCMDYEPDHRPSFRAIIRDLNSLFT  275 (289)
T ss_dssp             THHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            4567778999999999999999999986543

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=90.28  E-value=0.19  Score=37.01  Aligned_cols=31  Identities=23%  Similarity=0.326  Sum_probs=26.7

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|++.+|.+||++.++++.|+...
T Consensus       256 ~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~  286 (298)
T 3pls_A          256 SLYQVMQQCWEADPAVRPTFRVLVGEVEQIV  286 (298)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            4567778999999999999999999998653

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=90.27  E-value=0.22  Score=37.19  Aligned_cols=31  Identities=13%  Similarity=0.383  Sum_probs=26.5

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|++.+|..||++.++++.|+...
T Consensus       268 ~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~  298 (322)
T 1p4o_A          268 MLFELMRMCWQYNPKMRPSFLEIISSIKEEM  298 (322)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence            3556777899999999999999999998654

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=90.24  E-value=0.19  Score=36.90  Aligned_cols=30  Identities=13%  Similarity=0.254  Sum_probs=25.8

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|++.+|.+||++.++++.|+..
T Consensus       245 ~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  274 (281)
T 1mp8_A          245 TLYSLMTKCWAYDPSRRPRFTELKAQLSTI  274 (281)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            355677899999999999999999999753

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=89.97  E-value=0.2  Score=38.78  Aligned_cols=32  Identities=13%  Similarity=0.215  Sum_probs=27.3

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcccC
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRVA   69 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~   69 (142)
                      .+..+...|++.+|.+||++.+|++.|+....
T Consensus       314 ~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~  345 (367)
T 3l9p_A          314 PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  345 (367)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence            35677889999999999999999999976543

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=89.69  E-value=0.21  Score=36.47  Aligned_cols=31  Identities=13%  Similarity=0.030  Sum_probs=26.0

Q ss_pred             HHHHHhhhcCCCCCCCCCHHHHHHHhhcccC
Q 032356           39 MINVALLCADVSHTNRPLMSSVVSMLEGRVA   69 (142)
Q Consensus        39 ~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~   69 (142)
                      +..+...|++.+|.+||++.++++.|.....
T Consensus       244 ~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~  274 (284)
T 2a19_B          244 EKTLLQKLLSKKPEDRPNTSEILRTLTVWKK  274 (284)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred             HHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence            3456678999999999999999999986544

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=89.56  E-value=0.22  Score=37.75  Aligned_cols=32  Identities=16%  Similarity=0.233  Sum_probs=27.0

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcccC
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRVA   69 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~   69 (142)
                      .+..+...|++.+|.+||++.++++.|+....
T Consensus       287 ~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~  318 (334)
T 2pvf_A          287 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  318 (334)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            45667788999999999999999999986543

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=89.55  E-value=0.24  Score=36.98  Aligned_cols=31  Identities=19%  Similarity=0.280  Sum_probs=26.7

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|++.+|..||++.++++.|+...
T Consensus       277 ~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~  307 (313)
T 3brb_A          277 ELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL  307 (313)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            4667778999999999999999999998643

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=89.50  E-value=0.24  Score=37.13  Aligned_cols=33  Identities=15%  Similarity=0.255  Sum_probs=28.2

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhcccC
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEGRVA   69 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~   69 (142)
                      ..+..+...|++.+|.+||++.++++.|+....
T Consensus       266 ~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~  298 (323)
T 3qup_A          266 EEVYDLMYQCWSADPKQRPSFTCLRMELENILG  298 (323)
T ss_dssp             HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            346678889999999999999999999987654

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=89.40  E-value=0.2  Score=37.89  Aligned_cols=30  Identities=13%  Similarity=0.232  Sum_probs=25.7

Q ss_pred             HHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           39 MINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        39 ~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      +..+...|++.+|.+||++.++++.|+...
T Consensus       246 ~~~li~~~l~~dp~~Rps~~el~~~l~~~~  275 (325)
T 3kex_A          246 VYMVMVKCWMIDENIRPTFKELANEFTRMA  275 (325)
T ss_dssp             TTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            455777899999999999999999997643

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=89.38  E-value=0.24  Score=37.27  Aligned_cols=32  Identities=13%  Similarity=0.215  Sum_probs=27.0

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcccC
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRVA   69 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~   69 (142)
                      .+..+...|++.+|.+||++.+|++.|+....
T Consensus       273 ~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          273 PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence            35567789999999999999999999986543

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=89.29  E-value=0.25  Score=37.51  Aligned_cols=32  Identities=9%  Similarity=0.151  Sum_probs=27.3

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcccC
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRVA   69 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~   69 (142)
                      .+..+...|++.+|.+||++.++++.|+....
T Consensus       247 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  278 (327)
T 3lzb_A          247 DVYMIMRKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            35667788999999999999999999987554

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=89.11  E-value=0.14  Score=38.28  Aligned_cols=33  Identities=18%  Similarity=0.150  Sum_probs=27.4

Q ss_pred             HHHHHhhhcCCCCCCCCCHHHHHHHhhcccCCC
Q 032356           39 MINVALLCADVSHTNRPLMSSVVSMLEGRVAVP   71 (142)
Q Consensus        39 ~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~~~   71 (142)
                      +..+...|++.+|.+||++.++++.|+......
T Consensus       278 ~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~  310 (337)
T 3ll6_A          278 FHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR  310 (337)
T ss_dssp             GHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence            456778899999999999999999998765433

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=89.00  E-value=0.27  Score=37.18  Aligned_cols=32  Identities=19%  Similarity=0.314  Sum_probs=26.9

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcccC
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRVA   69 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~   69 (142)
                      .+..+...|++.+|..||++.+|++.|+....
T Consensus       303 ~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  334 (344)
T 1rjb_A          303 EIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA  334 (344)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence            45667789999999999999999999987543

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=88.69  E-value=0.28  Score=38.01  Aligned_cols=31  Identities=16%  Similarity=0.234  Sum_probs=26.5

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|++.+|.+||++.++++.|+...
T Consensus       333 ~l~~li~~~l~~dP~~Rpt~~ell~~L~~il  363 (370)
T 2psq_A          333 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL  363 (370)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            4566777899999999999999999998643

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=88.60  E-value=0.29  Score=38.15  Aligned_cols=31  Identities=26%  Similarity=0.328  Sum_probs=26.6

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|++.+|.+||++.++++.|+...
T Consensus       324 ~l~~li~~cl~~dp~~RPs~~ell~~L~~i~  354 (373)
T 3c1x_A          324 PLYEVMLKCWHPKAEMRPSFSELVSRISAIF  354 (373)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            4566778999999999999999999998654

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=88.49  E-value=0.41  Score=36.70  Aligned_cols=31  Identities=13%  Similarity=0.140  Sum_probs=26.1

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|.+.+|.+||++.++++.|+...
T Consensus       298 ~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~  328 (364)
T 3op5_A          298 EIAKYMETVKLLDYTEKPLYENLRDILLQGL  328 (364)
T ss_dssp             HHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence            3556777899999999999999999987644

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=88.45  E-value=0.32  Score=35.84  Aligned_cols=30  Identities=13%  Similarity=0.114  Sum_probs=25.8

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|++.+|.+||++.+|++.|+..
T Consensus       241 ~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  270 (287)
T 1u59_A          241 ELYALMSDCWIYKWEDRPDFLTVEQRMRAC  270 (287)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            455677899999999999999999998754

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=88.20  E-value=0.52  Score=38.57  Aligned_cols=32  Identities=16%  Similarity=0.274  Sum_probs=27.3

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcccC
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRVA   69 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~   69 (142)
                      .+..+...|++.+|.+||++.+|+++|+....
T Consensus       492 ~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~  523 (535)
T 2h8h_A          492 SLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  523 (535)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence            35567789999999999999999999987553

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=87.56  E-value=0.38  Score=36.18  Aligned_cols=31  Identities=13%  Similarity=0.236  Sum_probs=26.1

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|++.+|.+||++.++++.|+...
T Consensus       269 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  299 (327)
T 1fvr_A          269 EVYDLMRQCWREKPYERPSFAQILVSLNRML  299 (327)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            3556778999999999999999999887544

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=87.05  E-value=0.54  Score=38.23  Aligned_cols=30  Identities=10%  Similarity=0.213  Sum_probs=26.3

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|++.+|.+||++.+|+++|+..
T Consensus       247 ~l~~li~~cl~~dP~~RPs~~el~~~L~~l  276 (483)
T 3sv0_A          247 EFASYFHYCRSLRFDDKPDYSYLKRLFRDL  276 (483)
T ss_dssp             HHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            467788899999999999999999988754

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=86.79  E-value=0.55  Score=39.19  Aligned_cols=31  Identities=13%  Similarity=0.085  Sum_probs=26.6

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      ..+..+...|.+.+|.+||++.+|++.|+..
T Consensus       566 ~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~  596 (613)
T 2ozo_A          566 PELYALMSDCWIYKWEDRPDFLTVEQRMRAC  596 (613)
T ss_dssp             HHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            3466778899999999999999999999753

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=86.61  E-value=0.41  Score=38.17  Aligned_cols=30  Identities=20%  Similarity=0.282  Sum_probs=25.6

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+-..|.+.+|.+||++.++++.|+..
T Consensus       414 ~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i  443 (450)
T 1k9a_A          414 AVYDVMKNCWHLDAATRPTFLQLREQLEHI  443 (450)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            455666789999999999999999999864

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=85.41  E-value=0.58  Score=35.22  Aligned_cols=30  Identities=7%  Similarity=0.056  Sum_probs=26.0

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|.+.+|..||++.+|++.|+..
T Consensus       250 ~~~~li~~~l~~~p~~RP~~~~l~~~l~~~  279 (330)
T 2izr_A          250 EMATYLRYVRRLDFFEKPDYDYLRKLFTDL  279 (330)
T ss_dssp             HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence            566777889999999999999999988743

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=85.39  E-value=0.71  Score=38.77  Aligned_cols=29  Identities=28%  Similarity=0.337  Sum_probs=25.4

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      .+..+...|++.+|.+||++.+|++.|+.
T Consensus       600 ~l~~li~~cl~~dP~~RPs~~~l~~~L~~  628 (635)
T 4fl3_A          600 EMYDLMNLCWTYDVENRPGFAAVELRLRN  628 (635)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            45667788999999999999999999975

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=83.99  E-value=0.46  Score=34.59  Aligned_cols=29  Identities=7%  Similarity=0.060  Sum_probs=24.5

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      .+..+...|++.+|.+||++.+|++.+..
T Consensus       243 ~l~~li~~~l~~~p~~Rps~~~ll~~~~~  271 (279)
T 2w5a_A          243 ELNEIITRMLNLKDYHRPSVEEILENPLI  271 (279)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence            45567789999999999999999987754

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=83.24  E-value=0.8  Score=33.91  Aligned_cols=25  Identities=12%  Similarity=0.187  Sum_probs=21.9

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      .+..+...|++.+|.+||++.++++
T Consensus       260 ~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          260 PALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             HHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHccCChhhcCCHHHHhc
Confidence            3567888999999999999999985

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=82.85  E-value=0.94  Score=34.59  Aligned_cols=30  Identities=13%  Similarity=0.172  Sum_probs=25.1

Q ss_pred             HHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           33 EEQAMVMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        33 ~~~l~~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      .+.-..+..+...|++.+|.+||++.+|++
T Consensus       362 ~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          362 QEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             HHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             hhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence            344456778899999999999999999875

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=82.64  E-value=0.86  Score=34.59  Aligned_cols=26  Identities=12%  Similarity=0.185  Sum_probs=22.0

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHH
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSM   63 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~   63 (142)
                      .+..+...|++.+|.+||++.++++.
T Consensus       249 ~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          249 DLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHHHHcCCChhHCCCHHHHHhC
Confidence            35567778999999999999999863

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=82.56  E-value=0.85  Score=33.54  Aligned_cols=25  Identities=12%  Similarity=0.157  Sum_probs=21.0

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      .+..+...|++.+|.+||++.+|++
T Consensus       254 ~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          254 QAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             HHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhc
Confidence            3456777899999999999999875

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=82.35  E-value=0.9  Score=33.98  Aligned_cols=25  Identities=8%  Similarity=0.142  Sum_probs=21.7

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      .+..+...|++.+|.+||++.++++
T Consensus       280 ~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          280 ELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHh
Confidence            4567778899999999999999885

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=81.32  E-value=0.95  Score=32.81  Aligned_cols=25  Identities=8%  Similarity=0.149  Sum_probs=21.6

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      .+..+...|++.+|..||++.+|++
T Consensus       237 ~l~~li~~~l~~~p~~Rps~~~~l~  261 (276)
T 2h6d_A          237 SVATLLMHMLQVDPLKRATIKDIRE  261 (276)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHccCChhhCCCHHHHHh
Confidence            3556778899999999999999986

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=80.97  E-value=0.98  Score=32.95  Aligned_cols=25  Identities=20%  Similarity=0.246  Sum_probs=21.5

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      .+..+...|++.+|.+||++.++++
T Consensus       259 ~~~~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          259 VEKKIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHhcCcccCcCHHHHhC
Confidence            3556778899999999999999886

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=80.95  E-value=0.8  Score=33.13  Aligned_cols=25  Identities=12%  Similarity=0.153  Sum_probs=20.9

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      .+..+...|++.+|.+||++.++++
T Consensus       255 ~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          255 EFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHhCCCcccCCCHHHHhh
Confidence            3556677899999999999999875

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=80.80  E-value=1.1  Score=33.25  Aligned_cols=25  Identities=12%  Similarity=0.210  Sum_probs=21.1

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      .+..+...|++.+|.+||++.++++
T Consensus       268 ~l~~li~~~l~~dp~~Rps~~ell~  292 (313)
T 3cek_A          268 DLQDVLKCCLKRDPKQRISIPELLA  292 (313)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHccCCcccCcCHHHHhc
Confidence            3456667899999999999999985

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=80.72  E-value=0.66  Score=33.88  Aligned_cols=25  Identities=12%  Similarity=0.372  Sum_probs=21.3

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      .+..+...|++.+|.+||++.+|++
T Consensus       242 ~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          242 EFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHhhcChhhCcCHHHHHh
Confidence            3566777899999999999999875

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=80.69  E-value=0.91  Score=33.71  Aligned_cols=26  Identities=4%  Similarity=0.069  Sum_probs=22.6

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      ..+..+...|++.+|.+||++.+|++
T Consensus       303 ~~l~~li~~~L~~dP~~Rpt~~ell~  328 (339)
T 1z57_A          303 ERLFDLIQKMLEYDPAKRITLREALK  328 (339)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHHhCcCcccccCHHHHhc
Confidence            45678888999999999999999874

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=80.66  E-value=1.2  Score=32.61  Aligned_cols=25  Identities=12%  Similarity=0.179  Sum_probs=21.0

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      .+..+...|++.+|.+||++.++++
T Consensus       254 ~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          254 EAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             HHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhc
Confidence            3456678899999999999999875

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=80.22  E-value=1.1  Score=34.81  Aligned_cols=25  Identities=12%  Similarity=0.210  Sum_probs=21.5

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHH
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVS   62 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~   62 (142)
                      .+..+...|++.+|..||++.+|++
T Consensus       296 ~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          296 DLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHcccChhhCCCHHHHhh
Confidence            3556777899999999999999985

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=80.17  E-value=1  Score=37.91  Aligned_cols=30  Identities=13%  Similarity=0.254  Sum_probs=26.0

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|++.+|..||++.++++.|+..
T Consensus       620 ~l~~li~~~l~~dP~~RPs~~el~~~L~~i  649 (656)
T 2j0j_A          620 TLYSLMTKCWAYDPSRRPRFTELKAQLSTI  649 (656)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            456677899999999999999999999754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	142
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-06
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-04
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	6e-04
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	6e-04

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 3e-06
 Identities = 10/58 (17%), Positives = 23/58 (39%)

Query: 15  EQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLEGRVAVPD 72
               +M+ ++    L    +    +  + + C       RP  + +VS+L+  +  PD
Sbjct: 218 SNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 275

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.8 bits (87), Expect = 2e-04
 Identities = 10/68 (14%), Positives = 25/68 (36%), Gaps = 6/68 (8%)

Query: 14  KEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLEGRVAVPDF 73
            +   + EL++    +   E     +  +   C   + ++RP  + +    E        
Sbjct: 220 IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE------TM 273

Query: 74  IPDSSVSN 81
             +SS+S+
Sbjct: 274 FQESSISD 281

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.3 bits (83), Expect = 6e-04
 Identities = 8/55 (14%), Positives = 22/55 (40%)

Query: 18  NLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLEGRVAVPD 72
           +++  ++    L    +    +  + L C      +RP    +V+ L+  +  P+
Sbjct: 241 DVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPN 295

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (83), Expect = 6e-04
 Identities = 8/57 (14%), Positives = 21/57 (36%)

Query: 13  LKEQGNLMELVDPHLGLNFVEEQAMVMINVALLCADVSHTNRPLMSSVVSMLEGRVA 69
           +       +++     +   E     M ++   C D     RP    +V ++E +++
Sbjct: 251 MPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	142
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	95.93
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	95.72
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	95.66
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	95.65
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	95.45
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	95.36
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	95.34
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	95.22
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	95.01
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	94.95
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	94.75
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	94.43
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	94.35
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	94.28
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	94.23
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	94.12
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	94.12
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	93.75
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	93.42
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	93.27
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	93.17
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	92.55
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	92.1

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.93  E-value=0.0016  Score=47.58  Aligned_cols=33  Identities=18%  Similarity=0.435  Sum_probs=28.6

Q ss_pred             HHHHHHHhhhcCCCCCCCCCHHHHHHHhhcccC
Q 032356           37 MVMINVALLCADVSHTNRPLMSSVVSMLEGRVA   69 (142)
Q Consensus        37 ~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~   69 (142)
                      ..+.++...|.+.+|.+||+|.+|+++|+....
T Consensus       240 ~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~  272 (283)
T d1mqba_         240 SAIYQLMMQCWQQERARRPKFADIVSILDKLIR  272 (283)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhh
Confidence            456778899999999999999999999987554

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.72  E-value=0.0028  Score=46.51  Aligned_cols=31  Identities=23%  Similarity=0.364  Sum_probs=27.7

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|.+.+|.+||+|.+|+++|+...
T Consensus       270 ~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         270 ELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            5678899999999999999999999998653

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.66  E-value=0.0035  Score=46.26  Aligned_cols=32  Identities=13%  Similarity=0.371  Sum_probs=27.9

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcccC
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRVA   69 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~~   69 (142)
                      .+.++...|.+.+|.+||+|.+|+++|+...+
T Consensus       263 ~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         263 MLFELMRMCWQYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            46778889999999999999999999987543

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.65  E-value=0.002  Score=46.48  Aligned_cols=30  Identities=17%  Similarity=0.249  Sum_probs=26.6

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|.+.+|.+||+|.+|++.|+..
T Consensus       230 ~l~~li~~cl~~~p~~Rps~~~il~~L~~i  259 (263)
T d1sm2a_         230 HVYQIMNHCWKERPEDRPAFSRLLRQLAEI  259 (263)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence            456788899999999999999999999864

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.45  E-value=0.0042  Score=44.98  Aligned_cols=29  Identities=24%  Similarity=0.387  Sum_probs=25.6

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      .+..+...|++.+|.+||+|.+|+++|+.
T Consensus       238 ~l~~li~~cl~~~P~~Rpt~~ei~~~L~~  266 (272)
T d1qpca_         238 ELYQLMRLCWKERPEDRPTFDYLRSVLED  266 (272)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHhhh
Confidence            45667789999999999999999999974

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.36  E-value=0.0056  Score=44.99  Aligned_cols=34  Identities=18%  Similarity=0.106  Sum_probs=29.5

Q ss_pred             HHHHHHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           34 EQAMVMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        34 ~~l~~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      +....+..+...|++.+|.+||+|.+|+++|+..
T Consensus       262 ~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i  295 (303)
T d1vjya_         262 EALRVMAKIMRECWYANGAARLTALRIKKTLSQL  295 (303)
T ss_dssp             HHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence            4556688899999999999999999999999753

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.34  E-value=0.0086  Score=43.74  Aligned_cols=31  Identities=16%  Similarity=0.276  Sum_probs=27.2

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+.++...|++.+|.+||+|.+|+++|+...
T Consensus       242 ~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~  272 (285)
T d1fmka3         242 SLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  272 (285)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred             HHHHHHHHHcccCHhHCcCHHHHHHHHhhhh
Confidence            4567788999999999999999999998744

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.22  E-value=0.005  Score=45.54  Aligned_cols=31  Identities=26%  Similarity=0.328  Sum_probs=27.1

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|.+.+|.+||+|.+|++.|+...
T Consensus       262 ~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~  292 (311)
T d1r0pa_         262 PLYEVMLKCWHPKAEMRPSFSELVSRISAIF  292 (311)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            4567788999999999999999999998654

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.01  E-value=0.0094  Score=43.70  Aligned_cols=31  Identities=19%  Similarity=0.416  Sum_probs=26.9

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+.++...|.+.+|.+||+|.+|++.|+...
T Consensus       261 ~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l  291 (299)
T d1jpaa_         261 ALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI  291 (299)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence            4567888999999999999999999998643

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.95  E-value=0.0067  Score=44.65  Aligned_cols=30  Identities=23%  Similarity=0.486  Sum_probs=26.6

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|++.+|.+||+|.+|+++|+..
T Consensus       276 ~l~~Li~~cl~~dP~~RPs~~~il~~L~~~  305 (311)
T d1t46a_         276 EMYDIMKTCWDADPLKRPTFKQIVQLIEKQ  305 (311)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            466778899999999999999999999864

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.75  E-value=0.0076  Score=44.07  Aligned_cols=31  Identities=19%  Similarity=0.251  Sum_probs=27.4

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+.++..+|++.+|..||++.+|+++|+...
T Consensus       265 ~l~~li~~cl~~dP~~Rps~~eil~~L~~i~  295 (299)
T d1fgka_         265 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV  295 (299)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHHHHHHHHh
Confidence            4667889999999999999999999998654

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.43  E-value=0.01  Score=43.62  Aligned_cols=31  Identities=13%  Similarity=0.236  Sum_probs=26.3

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|++.+|.+||+|.+|++.|+...
T Consensus       254 ~~~~li~~cl~~dP~~RPs~~eil~~L~~i~  284 (309)
T d1fvra_         254 EVYDLMRQCWREKPYERPSFAQILVSLNRML  284 (309)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            4556677899999999999999999987654

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.35  E-value=0.012  Score=42.44  Aligned_cols=30  Identities=20%  Similarity=0.228  Sum_probs=25.7

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+.++...|.+.+|.+||+|.+|+++|+..
T Consensus       228 ~~~~li~~cl~~dP~~Rps~~~l~~~L~~i  257 (262)
T d1byga_         228 AVYEVMKNCWHLDAAMRPSFLQLREQLEHI  257 (262)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence            445667899999999999999999999753

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.28  E-value=0.012  Score=42.72  Aligned_cols=30  Identities=27%  Similarity=0.318  Sum_probs=26.2

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|++.+|.+||++.+|++.|+..
T Consensus       265 ~l~~li~~cl~~dP~~Rpt~~eil~~L~~i  294 (299)
T d1ywna1         265 EMYQTMLDCWHGEPSQRPTFSELVEHLGNL  294 (299)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            456778899999999999999999999753

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.23  E-value=0.019  Score=41.52  Aligned_cols=29  Identities=28%  Similarity=0.337  Sum_probs=25.0

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      .+..+...|.+.+|.+||+|.+|+++|+.
T Consensus       238 ~~~~li~~cl~~dp~~RPs~~~i~~~L~~  266 (277)
T d1xbba_         238 EMYDLMNLCWTYDVENRPGFAAVELRLRN  266 (277)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHhhC
Confidence            35567789999999999999999998864

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.12  E-value=0.015  Score=42.36  Aligned_cols=30  Identities=13%  Similarity=0.268  Sum_probs=26.4

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|++.+|.+||+|.+|++.|+..
T Consensus       244 ~l~~li~~cl~~dP~~Rps~~ei~~~L~~~  273 (287)
T d1opja_         244 KVYELMRACWQWNPSDRPSFAEIHQAFETM  273 (287)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            466788899999999999999999999754

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.12  E-value=0.015  Score=42.15  Aligned_cols=31  Identities=19%  Similarity=0.360  Sum_probs=26.6

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhccc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGRV   68 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~~   68 (142)
                      .+..+...|.+.+|.+||++.+|++.|+...
T Consensus       241 ~l~~li~~cl~~dp~~RPt~~~il~~Le~l~  271 (276)
T d1uwha_         241 AMKRLMAECLKKKRDERPLFPQILASIELLA  271 (276)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            4556778999999999999999999998643

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.75  E-value=0.019  Score=42.42  Aligned_cols=28  Identities=18%  Similarity=0.315  Sum_probs=24.8

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhh
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLE   65 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~   65 (142)
                      .+..+...|++.+|.+||+|.+|+++|.
T Consensus       295 ~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         295 EIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            4566778999999999999999999985

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.42  E-value=0.022  Score=41.07  Aligned_cols=29  Identities=21%  Similarity=0.315  Sum_probs=25.7

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      .+.++...|.+.+|..||++.+|++.|+.
T Consensus       243 ~l~~li~~cl~~dp~~RPt~~ei~~~L~~  271 (273)
T d1u46a_         243 DIYNVMVQCWAHKPEDRPTFVALRDFLLE  271 (273)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence            45678889999999999999999999874

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.27  E-value=0.028  Score=40.19  Aligned_cols=29  Identities=14%  Similarity=0.245  Sum_probs=25.3

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      .+..+...|.+.+|.+||++.++++.|..
T Consensus       229 ~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         229 KVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence            45677888999999999999999999863

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.17  E-value=0.025  Score=41.07  Aligned_cols=29  Identities=14%  Similarity=0.143  Sum_probs=25.3

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      .+..+...|.+.+|.+||+|.+|++.|+.
T Consensus       240 ~l~~li~~cl~~~p~~RPs~~~i~~~L~~  268 (285)
T d1u59a_         240 ELYALMSDCWIYKWEDRPDFLTVEQRMRA  268 (285)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            45567789999999999999999998874

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.55  E-value=0.037  Score=40.55  Aligned_cols=30  Identities=10%  Similarity=0.211  Sum_probs=25.8

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhcc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEGR   67 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~~   67 (142)
                      .+..+...|.+.+|.+||++.+|++.|+..
T Consensus       241 ~~~~li~~cl~~dP~~RPs~~eil~~l~~~  270 (317)
T d1xkka_         241 DVYMIMVKCWMIDADSRPKFRELIIEFSKM  270 (317)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCChhhCcCHHHHHHHHHHH
Confidence            456788899999999999999999988653

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.10  E-value=0.046  Score=39.03  Aligned_cols=29  Identities=14%  Similarity=0.290  Sum_probs=25.0

Q ss_pred             HHHHHHhhhcCCCCCCCCCHHHHHHHhhc
Q 032356           38 VMINVALLCADVSHTNRPLMSSVVSMLEG   66 (142)
Q Consensus        38 ~~~~val~C~~~~p~~RPtM~~Vv~~L~~   66 (142)
                      .+..+...|++.+|.+||++.+|++.|+.
T Consensus       237 ~~~~li~~cl~~dp~~Rps~~ei~~~L~~  265 (273)
T d1mp8a_         237 TLYSLMTKCWAYDPSRRPRFTELKAQLST  265 (273)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            35566779999999999999999998874