Citrus Sinensis ID: 032393

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140--
Protein Sequence
MGEENKEEQKKEEAKKEKKEEEKKEEETPEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELISPLPKPPPPDADDQEKKEQQKVEKKEEAAPFYFFTKARITRKVDNEY
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHHHHHccccccEEEEEEEcccHHHHHHHHHHHcccccEEEEEEEccccEEEEEEEcccHHHHHHHHHHHHcccEEEccccccccccccccHHHHHHHHHHHcccccccEEEcccEEEEcccccc
Secondary Structure Prediction (SSPRO)
ccccccHccccccccccccccccccccccEEEEEEEEccHHHHHHHHHHHHcccccEEEEEcccccEEEEEEEEccHHHHHHHHHHHccccEEEEcccccccccccccHccccccccccccccccccEEEccEEcccccccc
Coil and Loop (DISEMBL)
MGEENKEEQKKEEAKKEKKEEekkeeetpeiVLKVDMHCEACARKVARALKgfegvdditadskASKVVVkgktadpiKVCERLQkksgrkvelisplpkppppdaddqEKKEQQKVEkkeeaapfyffTKARitrkvdney
Flexible Loop (DISEMBL)
mgeenkeeqkkeeakkekkeeekkeeetpeivlkvdMHCEACARKVARALKgfegvdditadskaskvvvkgktadpikvcerlqkksgrkvelisplpkppppdaddqEKKEQQKvekkeeaapfyfftkaritrkvdney
Low Complexity Region (SEG)
MGeenkeeqkkeeakkekkeeekkeeeTPEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELISplpkppppdaddqekkeqqkvekkeeaaPFYFFTKARITRKVDNEY
Disordered region (IsUnstruct)
******************************IVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVC*******************************************PFYFFTKARI********
Disordered Region (DISOPRED)
*******************************VLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELIS********************************FTKARIT*******
Disordered Region (DISEMBL)
*****************************EIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELISPLPKPP******************EEAAPFYFFTKARITRKVDNEY
Disordered Region (DISPRO)
*************************EETPEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELISPLPKP*********************AAPFYFF*KARITRK*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxPEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELISPLPKPPPPDADDQEKKEQQKVEKKEEAAPFYFFTKARITRKVDNEY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	142	2.2.26 [Sep-21-2011]
Q9SZN7	153	Heavy metal-associated is	no	no	0.549	0.509	0.444	2e-09

>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 3/81 (3%)

Query: 19 KEEEKKEEETPEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPI 78
          K +++K+ +T EI  KV M CE C RKV R+++G +GV  +T + KA KV V G   DP 
Sbjct: 18 KIKKRKQLQTVEI--KVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYV-DPN 74

Query: 79 KVCERLQKKSGRKVELISPLP 99
          KV  R+  ++G+KVEL   +P
Sbjct: 75 KVVARMSHRTGKKVELWPYVP 95

Heavy-metal-binding protein. Binds lead, cadmium and copper. May be involved in heavy-metal transport.
Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	142
147838471	271	hypothetical protein VITISV_038964 [Viti	0.507	0.265	0.931	3e-32
449479514	300	PREDICTED: uncharacterized protein LOC10	0.711	0.336	0.655	6e-32
449434040	300	PREDICTED: uncharacterized protein LOC10	0.711	0.336	0.655	6e-32
224139462	267	predicted protein [Populus trichocarpa]	0.619	0.329	0.787	2e-31
359496116	210	PREDICTED: uncharacterized protein LOC10	0.514	0.347	0.904	3e-30
297735872	839	unnamed protein product [Vitis vinifera]	0.492	0.083	0.928	7e-30
359496109	267	PREDICTED: uncharacterized protein LOC10	0.422	0.224	0.927	2e-29
351723703	262	uncharacterized protein LOC100527827 [Gl	0.683	0.370	0.826	5e-28
356555759	267	PREDICTED: uncharacterized protein LOC10	0.471	0.250	0.911	1e-27
356541709	204	PREDICTED: uncharacterized protein LOC10	0.964	0.671	0.570	5e-27

>gi|147838471|emb|CAN69857.1| hypothetical protein VITISV_038964 [Vitis vinifera]

 Score =  143 bits (360), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 68/73 (93%), Positives = 72/73 (98%)

Query: 30  EIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSG 89
           EIVLKVDMHCEACARKVARALKGF+GV+D+T DSKASKVVVKGKTADPIKVCER+QKKSG
Sbjct: 36  EIVLKVDMHCEACARKVARALKGFQGVEDVTTDSKASKVVVKGKTADPIKVCERIQKKSG 95

Query: 90  RKVELISPLPKPP 102
           RKVELISPLPKPP
Sbjct: 96  RKVELISPLPKPP 108

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449479514|ref|XP_004155621.1| PREDICTED: uncharacterized protein LOC101226864 [Cucumis sativus]

 Score =  142 bits (357), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 78/119 (65%), Positives = 91/119 (76%), Gaps = 18/119 (15%)

Query: 2   GEENKEEQKKEEAKK----------------EKKEEEKKEEETP--EIVLKVDMHCEACA 43
           G++ KEE K++E K+                +KK+E KK EE P  +IVLKVDMHCEACA
Sbjct: 12  GDQKKEETKQQEKKEPTESATPPPPPTTEDEQKKQENKKNEEEPPQDIVLKVDMHCEACA 71

Query: 44  RKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELISPLPKPP 102
           RKVARALKGF+GV+++T DS+A KVVVKGK ADP KVCERLQKKSGRKVELISPLPKPP
Sbjct: 72  RKVARALKGFQGVENVTTDSRAGKVVVKGKGADPKKVCERLQKKSGRKVELISPLPKPP 130

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434040|ref|XP_004134804.1| PREDICTED: uncharacterized protein LOC101208608 [Cucumis sativus]

 Score =  142 bits (357), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 78/119 (65%), Positives = 91/119 (76%), Gaps = 18/119 (15%)

Query: 2   GEENKEEQKKEEAKK----------------EKKEEEKKEEETP--EIVLKVDMHCEACA 43
           G++ KEE K++E K+                +KK+E KK EE P  +IVLKVDMHCEACA
Sbjct: 12  GDQKKEETKQQEKKEPTESATPPPPPTTEDEQKKQENKKNEEEPPQDIVLKVDMHCEACA 71

Query: 44  RKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELISPLPKPP 102
           RKVARALKGF+GV+++T DS+A KVVVKGK ADP KVCERLQKKSGRKVELISPLPKPP
Sbjct: 72  RKVARALKGFQGVENVTTDSRAGKVVVKGKGADPKKVCERLQKKSGRKVELISPLPKPP 130

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139462|ref|XP_002323124.1| predicted protein [Populus trichocarpa] gi|222867754|gb|EEF04885.1| predicted protein [Populus trichocarpa]

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 74/94 (78%), Positives = 81/94 (86%), Gaps = 6/94 (6%)

Query: 29  PEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKS 88
           PEIVLKVDMHCEACARKVARALKGFEGV+++T DSKASKVVVKGK ADPIKVCERL+KK+
Sbjct: 29  PEIVLKVDMHCEACARKVARALKGFEGVEEVTTDSKASKVVVKGKKADPIKVCERLRKKN 88

Query: 89  GRKVELISPLPKPPPPDADDQEKKEQQKVEKKEE 122
           GRKVELISPLPKPP      +E KE+ K   KEE
Sbjct: 89  GRKVELISPLPKPP------EENKEENKDPPKEE 116

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496116|ref|XP_003635156.1| PREDICTED: uncharacterized protein LOC100854192 [Vitis vinifera]

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 66/73 (90%), Positives = 70/73 (95%)

Query: 30  EIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSG 89
           EIVLKVDMHCEACARKVARALKGF+GV+D+T DSKASKVVVKGKTADPIKVCER+QKKSG
Sbjct: 36  EIVLKVDMHCEACARKVARALKGFQGVEDVTTDSKASKVVVKGKTADPIKVCERIQKKSG 95

Query: 90  RKVELISPLPKPP 102
           RKVELISPL K P
Sbjct: 96  RKVELISPLKKIP 108

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735872|emb|CBI18631.3| unnamed protein product [Vitis vinifera]

 Score =  135 bits (339), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 65/70 (92%), Positives = 69/70 (98%)

Query: 30  EIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSG 89
           EIVLKVDMHCEACARKVARALKGF+GV+D+T DSKASKVVVKGKTADPIKVCER+QKKSG
Sbjct: 36  EIVLKVDMHCEACARKVARALKGFQGVEDVTTDSKASKVVVKGKTADPIKVCERIQKKSG 95

Query: 90  RKVELISPLP 99
           RKVELISPLP
Sbjct: 96  RKVELISPLP 105

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496109|ref|XP_002273672.2| PREDICTED: uncharacterized protein LOC100257542 [Vitis vinifera] gi|297735874|emb|CBI18633.3| unnamed protein product [Vitis vinifera]

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/69 (92%), Positives = 68/69 (98%)

Query: 30  EIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSG 89
           EIVLKVDMHCEACARKVARALKGF+GV+D+T DSKASKVVVKGKTADPIKVCER+QKKSG
Sbjct: 36  EIVLKVDMHCEACARKVARALKGFQGVEDVTTDSKASKVVVKGKTADPIKVCERIQKKSG 95

Query: 90  RKVELISPL 98
           RKVELISPL
Sbjct: 96  RKVELISPL 104

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351723703|ref|NP_001238056.1| uncharacterized protein LOC100527827 [Glycine max] gi|255633318|gb|ACU17016.1| unknown [Glycine max]

 Score =  129 bits (323), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 81/98 (82%), Positives = 91/98 (92%)

Query: 1  MGEENKEEQKKEEAKKEKKEEEKKEEETPEIVLKVDMHCEACARKVARALKGFEGVDDIT 60
          MGEE K+E  KEEAK+EKKEEEKKEE  PEIVLKVDMHCEACARKVA+ALKGF+GV++++
Sbjct: 1  MGEEKKDEGNKEEAKEEKKEEEKKEEPPPEIVLKVDMHCEACARKVAKALKGFQGVEEVS 60

Query: 61 ADSKASKVVVKGKTADPIKVCERLQKKSGRKVELISPL 98
          ADS+ SKVVVKGK ADPIKVCERLQKKSG+KVELISPL
Sbjct: 61 ADSRTSKVVVKGKAADPIKVCERLQKKSGKKVELISPL 98

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555759|ref|XP_003546197.1| PREDICTED: uncharacterized protein LOC100776967 [Glycine max]

 Score =  128 bits (321), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/68 (91%), Positives = 67/68 (98%)

Query: 31 IVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGR 90
          IVLKVDMHCEACARKVA+ALKGFEGV+++TADSKASKVVVKGK ADPIKVCERLQKKSG+
Sbjct: 31 IVLKVDMHCEACARKVAKALKGFEGVEEVTADSKASKVVVKGKAADPIKVCERLQKKSGK 90

Query: 91 KVELISPL 98
          KVELISPL
Sbjct: 91 KVELISPL 98

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356541709|ref|XP_003539316.1| PREDICTED: uncharacterized protein LOC100786661 [Glycine max]

 Score =  125 bits (314), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/142 (57%), Positives = 99/142 (69%), Gaps = 5/142 (3%)

Query: 1   MGEENKEEQKKEEAKKEKKEEEKKEEETPEIVLKVDMHCEACARKVARALKGFEGVDDIT 60
           + +E K++  KEEAK +KK+EE       EIVLKVDMHCEACARKVA+ALKGF+GV++++
Sbjct: 52  VNKEKKDKGNKEEAKDKKKKEEPPP----EIVLKVDMHCEACARKVAKALKGFQGVEEVS 107

Query: 61  ADSKASKVVVKGKTADPIKVCERLQKKSGRKVELISPLPKPPPPDADDQEKKEQQKVEKK 120
           ADS+ +KVVVKGKT DPIKVCERLQKKSG+K+ELISPLPK P     +  KK  QK  KK
Sbjct: 108 ADSRTNKVVVKGKTTDPIKVCERLQKKSGKKLELISPLPK-PQRRKKNHPKKNHQKWRKK 166

Query: 121 EEAAPFYFFTKARITRKVDNEY 142
            E         A I   +   Y
Sbjct: 167 YEPFSLIDLANAYIILHLVGGY 188

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	142
TAIR|locus:2163300	290	AT5G50740 [Arabidopsis thalian	0.471	0.231	0.701	3.9e-21
TAIR|locus:2167366	355	FP3 "farnesylated protein 3" [	0.471	0.188	0.641	5.3e-19
TAIR|locus:2075497	246	AT3G02960 "AT3G02960" [Arabido	0.471	0.272	0.522	4.9e-14
TAIR|locus:2057951	386	AT2G36950 [Arabidopsis thalian	0.436	0.160	0.539	3.4e-13
TAIR|locus:2046183	245	AT2G28090 [Arabidopsis thalian	0.464	0.269	0.454	5.6e-13
TAIR|locus:2142614	392	AT5G03380 [Arabidopsis thalian	0.457	0.165	0.439	4.3e-11
TAIR|locus:2121199	153	FP6 "farnesylated protein 6" [	0.443	0.411	0.468	1.2e-10
TAIR|locus:2089870	136	AT3G21490 "AT3G21490" [Arabido	0.457	0.477	0.409	1.5e-10
TAIR|locus:2156927	147	HIPP27 "heavy metal associated	0.450	0.435	0.4	1.4e-09
TAIR|locus:2153969	319	AT5G24580 "AT5G24580" [Arabido	0.471	0.210	0.352	2.5e-09

TAIR|locus:2163300 AT5G50740 [Arabidopsis thaliana (taxid:3702)]

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 47/67 (70%), Positives = 57/67 (85%)

Query:    30 EIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSG 89
             EIVLK+ MHCE CA+K+ R LKGFEGV+D+T D K SKVVVKG+ ADP+KV +RLQ+KS 
Sbjct:    35 EIVLKIFMHCEGCAKKIHRCLKGFEGVEDVTTDCKTSKVVVKGEKADPLKVLQRLQRKSH 94

Query:    90 RKVELIS 96
             R+VELIS
Sbjct:    95 RQVELIS 101

GO:0005634 "nucleus" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0005886 "plasma membrane" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2167366 FP3 "farnesylated protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 229 (85.7 bits), Expect = 5.3e-19, P = 5.3e-19
 Identities = 43/67 (64%), Positives = 54/67 (80%)

Query:    30 EIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSG 89
             E+VLKV MHCE CARKV R LKGFEGV+D+  D K  KVVVKG+ ADP+KV  R+Q+K+ 
Sbjct:    74 EVVLKVYMHCEGCARKVRRCLKGFEGVEDVMTDCKTGKVVVKGEKADPLKVLARVQRKTH 133

Query:    90 RKVELIS 96
             R+V+L+S
Sbjct:   134 RQVQLLS 140

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0046914 "transition metal ion binding" evidence=IDA

GO:0046916 "cellular transition metal ion homeostasis" evidence=TAS

GO:0005886 "plasma membrane" evidence=IDA

GO:0009616 "virus induced gene silencing" evidence=RCA

GO:0010050 "vegetative phase change" evidence=RCA

TAIR|locus:2075497 AT3G02960 "AT3G02960" [Arabidopsis thaliana (taxid:3702)]

 Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
 Identities = 35/67 (52%), Positives = 47/67 (70%)

Query:    30 EIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSG 89
             EIVLKV MHCE CA +V+  L+G++GV+ I  +   +KVVV GK  DP+K+  R+QKK  
Sbjct:    37 EIVLKVYMHCEGCASQVSHCLRGYDGVEHIKTEIGDNKVVVSGKFDDPLKILRRVQKKFS 96

Query:    90 RKVELIS 96
             R  E+IS
Sbjct:    97 RNAEMIS 103

GO:0005507 "copper ion binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006825 "copper ion transport" evidence=ISS

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2057951 AT2G36950 [Arabidopsis thaliana (taxid:3702)]

 Score = 179 (68.1 bits), Expect = 3.4e-13, P = 3.4e-13
 Identities = 34/63 (53%), Positives = 49/63 (77%)

Query:    32 VLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRK 91
             V KVDMHCE CA+K+ R +K F+GV D+TAD+  +K++V GK  DP+K+ E+L++K+ RK
Sbjct:    53 VYKVDMHCEGCAKKIKRMVKHFDGVKDVTADTGGNKLLVVGKI-DPVKLQEKLEEKTKRK 111

Query:    92 VEL 94
             V L
Sbjct:   112 VVL 114

GO:0005737 "cytoplasm" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0005507 "copper ion binding" evidence=IDA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2046183 AT2G28090 [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 30/66 (45%), Positives = 46/66 (69%)

Query:    31 IVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGR 90
             +VLK+D HC+ C  ++ R  +  EGV+ + AD  ++K+ + G   DP+K+ E+LQKKS +
Sbjct:    31 VVLKIDFHCDGCIARIVRLSRRLEGVETVRADPDSNKLTLIGFIMDPVKIAEKLQKKSKK 90

Query:    91 KVELIS 96
             KVELIS
Sbjct:    91 KVELIS 96

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2142614 AT5G03380 [Arabidopsis thaliana (taxid:3702)]

 Score = 160 (61.4 bits), Expect = 4.3e-11, P = 4.3e-11
 Identities = 29/66 (43%), Positives = 46/66 (69%)

Query:    31 IVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGR 90
             +V+K+DMHCE C +K+ R  K F+GV+D+  D K++K+ V G   DP++V +++  K  R
Sbjct:    26 VVMKLDMHCEGCGKKIKRIFKHFKGVEDVKIDYKSNKLTVIGNV-DPVEVRDKVADKIKR 84

Query:    91 KVELIS 96
              VEL+S
Sbjct:    85 PVELVS 90

GO:0005886 "plasma membrane" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0010200 "response to chitin" evidence=RCA

TAIR|locus:2121199 FP6 "farnesylated protein 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 30/64 (46%), Positives = 42/64 (65%)

Query:    31 IVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGR 90
             + +KV M CE C RKV R+++G +GV  +T + KA KV V G   DP KV  R+  ++G+
Sbjct:    28 VEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYV-DPNKVVARMSHRTGK 86

Query:    91 KVEL 94
             KVEL
Sbjct:    87 KVEL 90

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0010286 "heat acclimation" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2089870 AT3G21490 "AT3G21490" [Arabidopsis thaliana (taxid:3702)]

 Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 27/66 (40%), Positives = 44/66 (66%)

Query:    30 EIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSG 89
             ++   V MHC  C RK+AR +  F+GV+    D    KVVV+GK  DP K+ ++L+KK+G
Sbjct:    15 DVEFNVSMHCNDCERKIARVISKFKGVETFVTDMINHKVVVRGKI-DPNKLLKKLKKKTG 73

Query:    90 RKVELI 95
             ++V+++
Sbjct:    74 KRVKIV 79

GO:0005507 "copper ion binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006825 "copper ion transport" evidence=ISS

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2156927 HIPP27 "heavy metal associated isoprenylated plant protein 27" [Arabidopsis thaliana (taxid:3702)]

 Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 26/65 (40%), Positives = 42/65 (64%)

Query:    30 EIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSG 89
             ++ +KV M CE C R+V ++++G +GV  +T D K SK+ V+G    P KV  R+  ++G
Sbjct:    20 KVEIKVKMDCEGCERRVRKSVEGMKGVSKVTVDPKQSKLTVEG-FVQPSKVVHRVMHRTG 78

Query:    90 RKVEL 94
             +K EL
Sbjct:    79 KKAEL 83

GO:0005737 "cytoplasm" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2153969 AT5G24580 "AT5G24580" [Arabidopsis thaliana (taxid:3702)]

 Score = 142 (55.0 bits), Expect = 2.5e-09, P = 2.5e-09
 Identities = 24/68 (35%), Positives = 43/68 (63%)

Query:    29 PEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKS 88
             P  +L VD+HC  CA+K+ R++    GV+++  D   ++V +KG   DP  VC +++KK+
Sbjct:    56 PPFILYVDLHCVGCAKKIERSILKIRGVEEVVMDMNENQVTIKG-VLDPQAVCNKIKKKT 114

Query:    89 GRKVELIS 96
              R  +++S
Sbjct:   115 KRMAKVLS 122

GO:0005507 "copper ion binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006825 "copper ion transport" evidence=ISS

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_XVI0018 hypothetical protein (268 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	142
cd00371	63	cd00371, HMA, Heavy-metal-associated domain (HMA)	2e-09
pfam00403	62	pfam00403, HMA, Heavy-metal-associated domain	1e-07
PLN02957	238	PLN02957, PLN02957, copper, zinc superoxide dismut	3e-05

>gnl|CDD|238219 cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones

 Score = 50.3 bits (121), Expect = 2e-09
 Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 32 VLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGR 90
           L V+ M C  C  K+ +AL+   GV+ +  D +  K  V+       +      + +G 
Sbjct: 1  ELSVEGMTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEYDPEVSPEELLEAIEDAGY 60

Query: 91 KVE 93
          K  
Sbjct: 61 KAR 63

HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions. Length = 63

>gnl|CDD|215902 pfam00403, HMA, Heavy-metal-associated domain

 Score = 45.3 bits (108), Expect = 1e-07
 Identities = 15/48 (31%), Positives = 21/48 (43%)

Query: 31 IVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPI 78
           +    M C  CA+KV +AL    GV  ++ D +  KV V G      
Sbjct: 1  TLRVPGMTCAGCAKKVEKALSKLPGVSSVSVDLETGKVTVTGDPDPLK 48

Length = 62

>gnl|CDD|215516 PLN02957, PLN02957, copper, zinc superoxide dismutase

 Score = 41.7 bits (98), Expect = 3e-05
 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 4/69 (5%)

Query: 29 PEIVLK--VDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQK 86
          PE++ +  VDM CE C   V   L+  EGV  +  D   S  VV+   + P+K      +
Sbjct: 4  PELLTEFMVDMKCEGCVAAVKNKLETLEGVKAVEVD--LSNQVVRVLGSSPVKAMTAALE 61

Query: 87 KSGRKVELI 95
          ++GRK  LI
Sbjct: 62 QTGRKARLI 70

Length = 238

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	142
PF00403	62	HMA: Heavy-metal-associated domain; InterPro: IPR0	99.46
KOG1603	73	consensus Copper chaperone [Inorganic ion transpor	99.39
COG2608	71	CopZ Copper chaperone [Inorganic ion transport and	99.32
KOG4656	247	consensus Copper chaperone for superoxide dismutas	99.08
PLN02957	238	copper, zinc superoxide dismutase	98.48
PRK10671	834	copA copper exporting ATPase; Provisional	98.29
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	98.01
TIGR00003	68	copper ion binding protein. This model describes a	97.8
PRK10671	834	copA copper exporting ATPase; Provisional	97.23
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	96.94
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	96.9
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	96.62
COG1888	97	Uncharacterized protein conserved in archaea [Func	92.92
TIGR02052	92	MerP mercuric transport protein periplasmic compon	92.78
PF02680	95	DUF211: Uncharacterized ArCR, COG1888; InterPro: I	92.78
PRK13748	561	putative mercuric reductase; Provisional	88.97
PF01883	72	DUF59: Domain of unknown function DUF59; InterPro:	84.36
cd00371	63	HMA Heavy-metal-associated domain (HMA) is a conse	82.98

>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures

Probab=99.46  E-value=5.1e-13  Score=85.52  Aligned_cols=59  Identities=34%  Similarity=0.579  Sum_probs=53.8

Q ss_pred             EEEE-eccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCc
Q 032393           32 VLKV-DMHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRK   91 (142)
Q Consensus        32 ~lkV-~M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~   91 (142)
                      +|+| +|+|.+|+++|+++|.+++||.++.+|+.+++++|.++  .+++..|..+|+ ++||.
T Consensus         1 t~~v~~m~C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~~~~~~i~~~i~-~~Gy~   62 (62)
T PF00403_consen    1 TFKVPGMTCEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPDKTSIEKIIEAIE-KAGYE   62 (62)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTTTSCHHHHHHHHH-HTTSE
T ss_pred             CEEECCcccHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecCCCCHHHHHHHHH-HhCcC
Confidence            5889 59999999999999999999999999999999999876  246799999999 89984

These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....

>KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.39  E-value=2.4e-12  Score=86.09  Aligned_cols=68  Identities=47%  Similarity=0.851  Sum_probs=62.0

Q ss_pred             CCceEEEEEeccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccC-CcEEEcC
Q 032393           27 ETPEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSG-RKVELIS   96 (142)
Q Consensus        27 ~~~~i~lkV~M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G-~~aelis   96 (142)
                      .++..+++++|||.+|..+|.+.|+.+.||.++.+|...++|+|.|. +++..|+..|+ +.| +++.+|.
T Consensus         3 ~~~~~v~kv~~~C~gc~~kV~~~l~~~~GV~~v~id~~~~kvtV~g~-~~p~~vl~~l~-k~~~k~~~~~~   71 (73)
T KOG1603|consen    3 PIKTVVLKVNMHCEGCARKVKRVLQKLKGVESVDIDIKKQKVTVKGN-VDPVKLLKKLK-KTGGKRAELWK   71 (73)
T ss_pred             CccEEEEEECcccccHHHHHHHHhhccCCeEEEEecCCCCEEEEEEe-cCHHHHHHHHH-hcCCCceEEec
Confidence            45678899999999999999999999999999999999999999999 99999999999 466 7777664

>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.32  E-value=1.4e-11  Score=82.08  Aligned_cols=66  Identities=30%  Similarity=0.497  Sum_probs=58.5

Q ss_pred             ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEc
Q 032393           29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELI   95 (142)
Q Consensus        29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aeli   95 (142)
                      ..+.|+|. |+|.+|+..|+++|..++||.++.+|+..+.+.|+.+  .++...|+.+|. .+||.+..+
T Consensus         2 ~~~~l~v~~MtC~~C~~~V~~al~~v~gv~~v~v~l~~~~~~V~~d~~~~~~~~i~~ai~-~aGy~~~~~   70 (71)
T COG2608           2 MKTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDIEAIIEAIE-DAGYKVEEI   70 (71)
T ss_pred             ceEEEEECCcCcHHHHHHHHHHHhcCCCeeEEEEEcccCeEEEEEcCCcCCHHHHHHHHH-HcCCCeeec
Confidence            46789995 9999999999999999999999999999977777643  379999999999 899988764

>KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism]

Probab=99.08  E-value=6.3e-10  Score=88.27  Aligned_cols=71  Identities=28%  Similarity=0.470  Sum_probs=66.7

Q ss_pred             CceEEEEEeccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEEEcCCCCC
Q 032393           28 TPEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELISPLPK  100 (142)
Q Consensus        28 ~~~i~lkV~M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~aelis~~p~  100 (142)
                      ...++|.|+|+|++|++.|+.+|..++||.+|.+|+..+.|.|.+. ..++.|.+.|+ .+|++|.+...+-+
T Consensus         6 ~~~~efaV~M~cescvnavk~~L~~V~Gi~~vevdle~q~v~v~ts-~p~s~i~~~le-~tGr~Avl~G~G~p   76 (247)
T KOG4656|consen    6 TYEAEFAVQMTCESCVNAVKACLKGVPGINSVEVDLEQQIVSVETS-VPPSEIQNTLE-NTGRDAVLRGAGKP   76 (247)
T ss_pred             ceeEEEEEechhHHHHHHHHHHhccCCCcceEEEEhhhcEEEEEcc-CChHHHHHHHH-hhChheEEecCCch
Confidence            4568899999999999999999999999999999999999999998 89999999999 99999999998764

>PLN02957 copper, zinc superoxide dismutase

Probab=98.48  E-value=1.3e-06  Score=70.38  Aligned_cols=71  Identities=30%  Similarity=0.427  Sum_probs=63.8

Q ss_pred             ceEEEEEeccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEEEcCCCCCC
Q 032393           29 PEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELISPLPKP  101 (142)
Q Consensus        29 ~~i~lkV~M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~aelis~~p~~  101 (142)
                      ..+.|.+.|+|.+|+..|++.|.+++||..+.+|+..++++|.+. .+...|...|. .+||.+.+++..++.
T Consensus         6 ~~~~~~VgMsC~~Ca~~Iek~L~~~~GV~~v~vn~~~~~v~V~~~-~~~~~I~~aIe-~~Gy~a~~~~~~~~~   76 (238)
T PLN02957          6 LLTEFMVDMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGS-SPVKAMTAALE-QTGRKARLIGQGDPE   76 (238)
T ss_pred             EEEEEEECccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEec-CCHHHHHHHHH-HcCCcEEEecCCCcc
Confidence            456788899999999999999999999999999999999999886 78889999999 899999999876644

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.29  E-value=2.4e-06  Score=79.15  Aligned_cols=65  Identities=22%  Similarity=0.435  Sum_probs=57.6

Q ss_pred             ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEEEcCC
Q 032393           29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELISP   97 (142)
Q Consensus        29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~aelis~   97 (142)
                      ++++|.|+ |+|.+|+.+|+++|.+++||.++.+|+.  +.++.+. .+...+...+. ..||.+...++
T Consensus         3 ~~~~l~V~gmtC~~C~~~i~~al~~~~gv~~v~v~~~--~~~v~~~-~~~~~i~~~i~-~~Gy~~~~~~~   68 (834)
T PRK10671          3 QTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSIT--EAHVTGT-ASAEALIETIK-QAGYDASVSHP   68 (834)
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCcceEEEeee--EEEEEec-CCHHHHHHHHH-hcCCccccccc
Confidence            46889996 9999999999999999999999999994  5566676 78999999999 89999998764

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=98.01  E-value=1.7e-05  Score=72.97  Aligned_cols=64  Identities=28%  Similarity=0.542  Sum_probs=56.6

Q ss_pred             ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCC-HHHHHHHHHhccCCcEEE
Q 032393           29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TAD-PIKVCERLQKKSGRKVEL   94 (142)
Q Consensus        29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd-~~~I~~~I~kk~G~~ael   94 (142)
                      ..+.|.|. |||..|+++|+ +|.+++||..+.+|+.+++++|.++  ..+ ++.+...+. ..||.+..
T Consensus         2 ~~~~l~v~Gm~Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~~~~~~~~~~~~v~-~~gy~~~~   69 (713)
T COG2217           2 RETSLSVEGMTCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPEEVDLPADIVAAVE-KAGYSARL   69 (713)
T ss_pred             ceeEEeecCcCcHHHHHHHH-HHhcCCCeeEEEeecccceEEEEecccccccHHHHHHHHH-hcCccccc
Confidence            35679995 99999999999 9999999999999999999999865  245 789999999 89998876

>TIGR00003 copper ion binding protein

Probab=97.80  E-value=0.00035  Score=40.92  Aligned_cols=62  Identities=23%  Similarity=0.433  Sum_probs=50.5

Q ss_pred             ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCc
Q 032393           29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRK   91 (142)
Q Consensus        29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~   91 (142)
                      ....+.|+ ++|..|...+...+....|+..+.+++..+.+.+...  ..+...+...+. ..||.
T Consensus         2 ~~~~~~v~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~   66 (68)
T TIGR00003         2 QKFTVQVMSMTCQHCVDKIEKFVGELEGVSKVQVKLEKASVKVEFDAPQATEICIAEAIL-DAGYE   66 (68)
T ss_pred             cEEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEcCCCEEEEEeCCCCCCHHHHHHHHH-HcCCC
Confidence            34568885 9999999999999999999999999999999888742  246667777776 67764

This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (Pfam family pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases.

>PRK10671 copA copper exporting ATPase; Provisional

Probab=97.23  E-value=0.0011  Score=61.58  Aligned_cols=65  Identities=26%  Similarity=0.481  Sum_probs=56.8

Q ss_pred             eEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEEEcC
Q 032393           30 EIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELIS   96 (142)
Q Consensus        30 ~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~aelis   96 (142)
                      .+.|.+. |+|.+|+..|++.|..++||.++.+++.++++.+.+. .++..+...+. .+||.+.+++
T Consensus       100 ~~~l~V~Gm~Ca~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~~-~s~~~I~~~I~-~~Gy~a~~~~  165 (834)
T PRK10671        100 SQQLLLSGMSCASCVSRVQNALQSVPGVTQARVNLAERTALVMGS-ASPQDLVQAVE-KAGYGAEAIE  165 (834)
T ss_pred             eEEEEeCCcCcHHHHHHHHHHHhcCCCceeeeeecCCCeEEEEcc-CCHHHHHHHHH-hcCCCccccc
Confidence            5678895 9999999999999999999999999999999888765 78888888888 8999876543

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=96.94  E-value=0.0035  Score=57.91  Aligned_cols=67  Identities=28%  Similarity=0.421  Sum_probs=54.1

Q ss_pred             CCceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEEE
Q 032393           27 ETPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVEL   94 (142)
Q Consensus        27 ~~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~ael   94 (142)
                      ...++.|.+. |+|.+|+..++..+..++||.++.+++.++++.+.++......+...+. ..||.+..
T Consensus        51 ~~~r~~l~V~Gm~C~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~~~~~I~~aI~-~~Gy~a~~  118 (741)
T PRK11033         51 SGTRYSWKVSGMDCPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESAVQ-KAGFSLRD  118 (741)
T ss_pred             CCceEEEEECCCCcHHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEecccchHHHHHHHH-hccccccc
Confidence            4556778895 9999999999999999999999999999999888754112266777787 78987643

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=96.90  E-value=0.0027  Score=59.67  Aligned_cols=67  Identities=19%  Similarity=0.410  Sum_probs=59.9

Q ss_pred             ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEcC
Q 032393           29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELIS   96 (142)
Q Consensus        29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aelis   96 (142)
                      .++.|.|. |+|.+|..+|+..|.+++||.++.++..++++.|..+  .+.+-++++.|. .+|+.+.+..
T Consensus       146 ~~i~L~v~g~~c~s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~~~~pr~i~k~ie-~~~~~~~~~~  215 (951)
T KOG0207|consen  146 QKIYLDVLGMTCASCVSKIESILERLRGVKSFSVSLATDTAIVVYDPEITGPRDIIKAIE-ETGFEASVRP  215 (951)
T ss_pred             CcEEEEeecccccchhhhhHHHHhhccCeeEEEEeccCCceEEEecccccChHHHHHHHH-hhcccceeee
Confidence            68899995 9999999999999999999999999999999998754  478899999998 8998766554

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=96.62  E-value=0.0042  Score=58.47  Aligned_cols=63  Identities=22%  Similarity=0.394  Sum_probs=57.1

Q ss_pred             eccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc-CCCHHHHHHHHHhccCCcEEEcCCCC
Q 032393           36 DMHCEACARKVARALKGFEGVDDITADSKASKVVVKGK-TADPIKVCERLQKKSGRKVELISPLP   99 (142)
Q Consensus        36 ~M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~-~vd~~~I~~~I~kk~G~~aelis~~p   99 (142)
                      +|+|..|.+.|+.++++.+||.++.+++.++..+|..+ .++++.|.++|. ..|+.+.+++...
T Consensus         2 gmtc~ac~~si~~~~~~~~g~~~i~vsl~~~~~~v~~~~~~~~~~i~~~ie-d~gf~~~~~~~~~   65 (951)
T KOG0207|consen    2 GMTCSACSNSIEKAISRKPGVQKIEVSLAQKRANVSYDNIVSPESIKETIE-DMGFEASLLSDSE   65 (951)
T ss_pred             CccHHHHhhhHHHHHhcCCCceeEEEEeccccceEEEeeccCHHHHHHHhh-cccceeeecccCc
Confidence            49999999999999999999999999999998888754 579999999999 9999999888644

>COG1888 Uncharacterized protein conserved in archaea [Function unknown]

Probab=92.92  E-value=0.96  Score=31.84  Aligned_cols=69  Identities=22%  Similarity=0.306  Sum_probs=46.8

Q ss_pred             CCceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEec-------CCCEEEEeccCCCHHHHHHHHHhccCCcEEEcC
Q 032393           27 ETPEIVLKVD-MHCEACARKVARALKGFEGVDDITADS-------KASKVVVKGKTADPIKVCERLQKKSGRKVELIS   96 (142)
Q Consensus        27 ~~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~-------~~~kVtV~g~~vd~~~I~~~I~kk~G~~aelis   96 (142)
                      ....++|.|. -|-.--.--+-..|++++||.-|++..       .+-+++|.|..+|..+|...|. .+|..++.+.
T Consensus         4 ~iRRlVLDvlKP~~~p~ive~A~~lskl~gVegVNItv~eiD~et~~~~itIeG~~ldydei~~~iE-~~Gg~IHSiD   80 (97)
T COG1888           4 GIRRLVLDVLKPHRGPTIVELALELSKLEGVEGVNITVTEIDVETENLKITIEGTNLDYDEIEEVIE-ELGGAIHSID   80 (97)
T ss_pred             cceeeeeeecCCcCCCcHHHHHHHHhhcCCcceEEEEEEEeeehhcceEEEEEcCCCCHHHHHHHHH-HcCCeeeehh
Confidence            4455667763 332223335566778888877665543       4556677887799999999999 8998877554

>TIGR02052 MerP mercuric transport protein periplasmic component

Probab=92.78  E-value=1.6  Score=27.69  Aligned_cols=63  Identities=25%  Similarity=0.357  Sum_probs=46.4

Q ss_pred             eEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEE
Q 032393           30 EIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVE   93 (142)
Q Consensus        30 ~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~ae   93 (142)
                      .+.+.++ ++|.+|...+...+....|+....++.....+.+...  ..+...+...+. ..|+.++
T Consensus        24 ~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~   89 (92)
T TIGR02052        24 TVTLEVPGMTCVACPITVETALQKVDGVSKAEVTFKTKLAVVTFDDEKTNVKALTEATT-DAGYPSS   89 (92)
T ss_pred             EEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-hcCCCeE
Confidence            3456675 9999999999999999999888888888887666521  135555556666 6777654

This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403).

>PF02680 DUF211: Uncharacterized ArCR, COG1888; InterPro: IPR003831 This entry describes proteins of unknown function

Probab=92.78  E-value=0.61  Score=32.93  Aligned_cols=67  Identities=25%  Similarity=0.388  Sum_probs=46.0

Q ss_pred             CCceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEec-----CCC--EEEEeccCCCHHHHHHHHHhccCCcEEEc
Q 032393           27 ETPEIVLKVD-MHCEACARKVARALKGFEGVDDITADS-----KAS--KVVVKGKTADPIKVCERLQKKSGRKVELI   95 (142)
Q Consensus        27 ~~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~-----~~~--kVtV~g~~vd~~~I~~~I~kk~G~~aeli   95 (142)
                      ...+++|.|- -|-+.-. .+-..|+.++||..|++..     .+.  +++|.|+.+|.+.|..+|. .+|-.++-+
T Consensus         3 ~irRlVLDVlKP~~p~i~-e~A~~l~~~~gV~gVnitv~EvD~ete~lkitiEG~~id~d~i~~~Ie-~~Gg~IHSI   77 (95)
T PF02680_consen    3 GIRRLVLDVLKPHEPSIV-ELAKALSELEGVDGVNITVVEVDVETENLKITIEGDDIDFDEIKEAIE-ELGGVIHSI   77 (95)
T ss_dssp             SEEEEEEEEEEESSS-HH-HHHHHHHTSTTEEEEEEEEEEE-SSEEEEEEEEEESSE-HHHHHHHHH-HTT-EEEEE
T ss_pred             ceeEEEEEeecCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEeCCCCHHHHHHHHH-HcCCeEEee
Confidence            4456778874 4444433 6778899999988776644     444  4455687799999999999 899777644

; PDB: 3BPD_I 2RAQ_F 2X3D_E.

>PRK13748 putative mercuric reductase; Provisional

Probab=88.97  E-value=3  Score=36.79  Aligned_cols=65  Identities=22%  Similarity=0.370  Sum_probs=50.3

Q ss_pred             EEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc-CCCHHHHHHHHHhccCCcEEEcCC
Q 032393           32 VLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK-TADPIKVCERLQKKSGRKVELISP   97 (142)
Q Consensus        32 ~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~-~vd~~~I~~~I~kk~G~~aelis~   97 (142)
                      .+.+. |+|.+|...++..+..++|+....+++..+.+.+... ..+...+...+. ..|+..+..+.
T Consensus         3 ~i~i~g~~C~~c~~~ie~~l~~~~gv~~a~~~~~~~~~~v~~~~~~~~~~i~~~i~-~~g~~~~~~~~   69 (561)
T PRK13748          3 TLKITGMTCDSCAAHVKDALEKVPGVQSADVSYPKGSAQLAIEVGTSPDALTAAVA-GLGYRATLADA   69 (561)
T ss_pred             EEEECCeecHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEEECCCCCHHHHHHHHH-HcCCeeeccCc
Confidence            35674 9999999999999999999999999998888777632 245566666666 68877666555

>PF01883 DUF59: Domain of unknown function DUF59; InterPro: IPR002744 This family includes prokaryotic proteins of unknown function

Probab=84.36  E-value=2  Score=27.67  Aligned_cols=33  Identities=21%  Similarity=0.540  Sum_probs=22.6

Q ss_pred             ceEEEEEeccchhHH------HHHHHHhhCCCCccEEEE
Q 032393           29 PEIVLKVDMHCEACA------RKVARALKGFEGVDDITA   61 (142)
Q Consensus        29 ~~i~lkV~M~C~~Ca------~kIekaL~~i~GV~~V~v   61 (142)
                      .++.|.+.+.+++|.      ..|+.+|+.++||.+|.|
T Consensus        34 ~~V~v~l~l~~~~~~~~~~l~~~i~~~l~~l~gv~~V~V   72 (72)
T PF01883_consen   34 GKVSVSLELPTPACPAAEPLREEIREALKALPGVKSVKV   72 (72)
T ss_dssp             CEEEEEE--SSTTHTTHHHHHHHHHHHHHTSTT-SEEEE
T ss_pred             CEEEEEEEECCCCchHHHHHHHHHHHHHHhCCCCceEeC
Confidence            456666666666664      678889999999998875

The family also includes PhaH (O84984 from SWISSPROT) from Pseudomonas putida. PhaH forms a complex with PhaF (O84982 from SWISSPROT), PhaG (O84983 from SWISSPROT) and PhaI (O84985 from SWISSPROT), which hydroxylates phenylacetic acid to 2-hydroxyphenylacetic acid []. So members of this family may all be components of ring hydroxylating complexes.; PDB: 3LNO_C 3CQ3_A 3CQ2_D 2CU6_B 3CQ1_A 3UX3_B 3UX2_A 1WCJ_A 1UWD_A.

>cd00371 HMA Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones

Probab=82.98  E-value=4.6  Score=20.56  Aligned_cols=50  Identities=26%  Similarity=0.563  Sum_probs=34.9

Q ss_pred             eccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc-CCCHHHHHHHHH
Q 032393           36 DMHCEACARKVARALKGFEGVDDITADSKASKVVVKGK-TADPIKVCERLQ   85 (142)
Q Consensus        36 ~M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~-~vd~~~I~~~I~   85 (142)
                      .++|..|...+...+....|+....+++....+.+... ..+...+...+.
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   56 (63)
T cd00371           6 GMTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEYDPEVSPEELLEAIE   56 (63)
T ss_pred             CeEcHHHHHHHHHHHhcCCCEeEEEEEccCCEEEEEECCCCCHHHHHHHHH
Confidence            38899999999999999999877777777766666542 124444434444

HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	142
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	3e-16
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	4e-15
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	8e-14
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	1e-10
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	3e-09
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	2e-06
2kkh_A	95	Putative heavy metal transporter; zinc transport,	1e-05
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	2e-05
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	3e-05
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	5e-05
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	6e-05
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	1e-04
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	1e-04
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	1e-04
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	2e-04
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	2e-04
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	6e-04
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	8e-04
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	9e-04

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 222

 Score = 71.2 bits (174), Expect = 3e-16
 Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 2/80 (2%)

Query: 26  EETPEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQ 85
            +T E    + MHCE C   +   LK   G++ +  D +   + V+  +  P  +   L+
Sbjct: 3   NDTYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVES-SVAPSTIINTLR 61

Query: 86  KKSGRKVELISPLPKPPPPD 105
              G+   +           
Sbjct: 62  -NCGKDAIIRGAGKPNSSAV 80

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 98

 Score = 65.6 bits (160), Expect = 4e-15
 Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 2/76 (2%)

Query: 21 EEKKEEETPEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKV 80
          +   +     +   V M C++C   V ++L+G  GV D+    +   V+V   T    +V
Sbjct: 11 DSGNQGTLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHT-TLPSQEV 69

Query: 81 CERLQKKSGRKVELIS 96
             L+  +GR+  L  
Sbjct: 70 QALLE-GTGRQAVLKG 84

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 249

 Score = 65.2 bits (158), Expect = 8e-14
 Identities = 17/105 (16%), Positives = 34/105 (32%), Gaps = 1/105 (0%)

Query: 26  EETPEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQ 85
            +T E    + MHCE C   +   LK   G++ +  D +   + V+  +  P  +   L+
Sbjct: 4   NDTYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVES-SVAPSTIINTLR 62

Query: 86  KKSGRKVELISPLPKPPPPDADDQEKKEQQKVEKKEEAAPFYFFT 130
                 +   +  P        +  +K     +K           
Sbjct: 63  NCGKDAIIRGAGKPNSSAVAILETFQKYTIDQKKDTAVRGLARIV 107

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A Length = 68

 Score = 53.1 bits (128), Expect = 1e-10
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 3/69 (4%)

Query: 29 PEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKS 88
          P+    VDM C  CA  V+R L    GV     D    KV ++        +   L KK+
Sbjct: 2  PKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIES-EHSMDTLLATL-KKT 58

Query: 89 GRKVELISP 97
          G+ V  +  
Sbjct: 59 GKTVSYLGL 67

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A Length = 73

 Score = 49.4 bits (118), Expect = 3e-09
 Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 27 ETPEIVLKVDMHCEACARKVARALKGFE-GVDDITADSKASKVVVKGKTADPIKVCERLQ 85
          E       V M C  C+  V + L   E  V  I    +   V V   T     + E+++
Sbjct: 3  EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYT-TLPYDFILEKIK 61

Query: 86 KKSGRKV 92
           K+G++V
Sbjct: 62 -KTGKEV 67

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str} Length = 85

 Score = 42.1 bits (99), Expect = 2e-06
 Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 1/62 (1%)

Query: 13 EAKKEKKEEEKKEEETPEIVLKV-DMHCEACARKVARALKGFEGVDDITADSKASKVVVK 71
                   E    +   +   V DM C  CA  +  A++       + AD  +  VVV 
Sbjct: 6  HHHHHSSGRENLYFQGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVG 65

Query: 72 GK 73
          G 
Sbjct: 66 GV 67

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana} Length = 95

 Score = 40.9 bits (96), Expect = 1e-05
 Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 14 AKKEKKEEEKKEEETPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVK 71
          A + K+EE+KK ++  +    V  + C +    +   LK  +GV + +    +  V+V 
Sbjct: 1  ALQNKEEEKKKVKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVV 59

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A Length = 66

 Score = 39.6 bits (93), Expect = 2e-05
 Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 3/67 (4%)

Query: 31 IVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSG 89
          + LKV+ M C  C   V +ALK   GV+ +    +  + +V+G TADP  + + + ++ G
Sbjct: 2  LKLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEG-TADPKALVQAV-EEEG 59

Query: 90 RKVELIS 96
           K E+++
Sbjct: 60 YKAEVLA 66

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A Length = 64

 Score = 38.9 bits (91), Expect = 3e-05
 Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 30 EIVLKV-DMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTAD 76
           I L V  + CEACA  V +A++  +    +  D  + KV +     +
Sbjct: 2  TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGE 49

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151

 Score = 39.7 bits (93), Expect = 5e-05
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 5/64 (7%)

Query: 27 ETPEIVLKVD-MHCEACARKVARALKGFEGVDDIT---ADSKASKVVVKGKTADPIKVCE 82
          E  EI ++V  M C ACA ++ + LK   GV D     A    + V+          + E
Sbjct: 4  EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVN-VIYDPAETGTAAIQE 62

Query: 83 RLQK 86
          +++K
Sbjct: 63 KIEK 66

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149

 Score = 39.6 bits (93), Expect = 6e-05
 Identities = 13/76 (17%), Positives = 31/76 (40%), Gaps = 4/76 (5%)

Query: 30  EIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVK--GKTADPIKVCERLQK 86
           +  L++  M C +C   + R L+   GV  +     A K  +K   +   P+++ + + +
Sbjct: 5   KCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFI-Q 63

Query: 87  KSGRKVELISPLPKPP 102
             G +  ++       
Sbjct: 64  DLGFEAAVMEDYAGSD 79

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A Length = 69

 Score = 37.3 bits (87), Expect = 1e-04
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 4/52 (7%)

Query: 30 EIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKV 80
          +  L+V+ M C+ C + V  ++   +GV  +  + +A KV V   + D  KV
Sbjct: 3  QKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDV---SFDADKV 51

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202

 Score = 39.2 bits (91), Expect = 1e-04
 Identities = 14/108 (12%), Positives = 28/108 (25%), Gaps = 5/108 (4%)

Query: 24  KEEETPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK----TADPI 78
           +      + L++D MHC++C   +   +    GV  I    +     VK      +   +
Sbjct: 15  QGSHVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVAL 74

Query: 79  KVCERLQKKSGRKVELISPLPKPPPPDADDQEKKEQQKVEKKEEAAPF 126
           +           KV L                         + +    
Sbjct: 75  QRAIEALPPGNFKVSLPDGAEGSGTDHRSSSSHSPGSPPRNQVQGTCS 122

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis} Length = 71

 Score = 37.2 bits (87), Expect = 1e-04
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 4/52 (7%)

Query: 30 EIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKV 80
          ++ L+V+ M C  C   +  ++K   GV+ +        V V   T D   V
Sbjct: 6  QLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEV---TIDSSVV 54

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723

 Score = 39.0 bits (92), Expect = 2e-04
 Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 11/91 (12%)

Query: 30  EIVLKVD-MHCEACARKVARALKGFEGVDDIT---ADSKASKVVVKGKTADPIKVCERLQ 85
           E  ++V  M C  C + +  A+   EGV+++    A   A  +    K  D   +   ++
Sbjct: 3   ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAF-IRFDEKRIDFETIKRVIE 61

Query: 86  KKSGRKVELISPLPKPPPPDADDQEKKEQQK 116
              G  V       +     A+ +     ++
Sbjct: 62  -DLGYGVV-----DEQAAVSAEVEHLSRMKR 86

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori} Length = 66

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 30 EIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVK 71
          +   +V  + C  C  K+ + +   EGV  I    +   VVV+
Sbjct: 2  KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVE 44

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A Length = 79

 Score = 35.4 bits (82), Expect = 6e-04
 Identities = 9/57 (15%), Positives = 18/57 (31%), Gaps = 4/57 (7%)

Query: 25 EEETPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKV 80
                + + V+ M C +C   + + +    GV  I    +     +     DP   
Sbjct: 4  SMGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATI---IYDPKLQ 57

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A Length = 72

 Score = 34.9 bits (81), Expect = 8e-04
 Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKV 80
          T E V+ +D M C +C + +   +    GV  I      S   V     DP+  
Sbjct: 2  TQETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTV---EYDPLLT 52

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus} Length = 73

 Score = 35.0 bits (81), Expect = 9e-04
 Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 2/55 (3%)

Query: 26 EETPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIK 79
          +   +IVL++  + C  C  +V +AL+   G      D   + V    +  D   
Sbjct: 2  DSVEKIVLELSGLSCHHCVARVKKALEEA-GAKVEKVDLNEAVVAGNKEDVDKYI 55

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	142
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	99.6
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	99.49
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	99.46
4a4j_A	69	Pacszia, cation-transporting ATPase PACS; hydrolas	99.46
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	99.39
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	99.39
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	99.29
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	99.26
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	99.25
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	99.25
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	99.24
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	99.24
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	99.24
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	99.22
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	99.22
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	99.21
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	99.19
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	99.19
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	99.18
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	99.18
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	99.18
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	99.17
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	99.16
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	99.15
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	99.15
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	99.14
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	99.14
2kyz_A	67	Heavy metal binding protein; structural genomics,	99.12
1jww_A	80	Potential copper-transporting ATPase; beta-alpha-b	99.12
2kkh_A	95	Putative heavy metal transporter; zinc transport,	99.11
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	99.09
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	99.08
2ofg_X	111	Zinc-transporting ATPase; ferredoxin-like fold, be	99.08
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	99.06
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	98.97
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	98.94
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	98.91
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	98.86
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	98.65
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	98.55
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.53
2x3d_A	96	SSO6206; unknown function; 2.70A {Sulfolobus solfa	91.25
2raq_A	97	Conserved protein MTH889; alpha-beta protein, stru	88.55
3bpd_A	100	Uncharacterized protein; heptamer, Mg+2 ION, PSI-2	87.77
3cq1_A	103	Putative uncharacterized protein TTHB138; DTDP-4-k	80.07
3lno_A	108	Putative uncharacterized protein; alpha-beta fold,	80.04

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A

Probab=99.60  E-value=4.2e-15  Score=95.01  Aligned_cols=66  Identities=29%  Similarity=0.502  Sum_probs=62.6

Q ss_pred             ceEEEEEeccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEEEcCC
Q 032393           29 PEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELISP   97 (142)
Q Consensus        29 ~~i~lkV~M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~aelis~   97 (142)
                      .++.|.|+|+|.+|+.+|+++|.+++|| ++.+|+.+++++|.+. +++..|..+|+ ++||.+.++++
T Consensus         2 ~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~-~~~~~i~~~i~-~~Gy~~~~~~~   67 (68)
T 3iwl_A            2 PKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESE-HSMDTLLATLK-KTGKTVSYLGL   67 (68)
T ss_dssp             CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEES-SCHHHHHHHHH-TTCSCEEEEEC
T ss_pred             ceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEec-CCHHHHHHHHH-HcCCceEecCC
Confidence            4678889999999999999999999999 9999999999999997 89999999999 89999999986

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A

Probab=99.49  E-value=1.7e-13  Score=87.96  Aligned_cols=68  Identities=22%  Similarity=0.298  Sum_probs=62.8

Q ss_pred             CceEEEEEeccchhHHHHHHHHhhCCC-CccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEEEcCC
Q 032393           28 TPEIVLKVDMHCEACARKVARALKGFE-GVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELISP   97 (142)
Q Consensus        28 ~~~i~lkV~M~C~~Ca~kIekaL~~i~-GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~aelis~   97 (142)
                      +.++.|.|+|+|.+|+.+|+++|.+++ ||.++.+|+.+++++|.+. +++..|..+|. ++||.+.++++
T Consensus         4 m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~-~~~~~i~~~i~-~~Gy~~~~~~~   72 (73)
T 1cc8_A            4 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTT-LPYDFILEKIK-KTGKEVRSGKQ   72 (73)
T ss_dssp             CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEES-SCHHHHHHHHH-TTSSCEEEEEE
T ss_pred             ceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEe-CCHHHHHHHHH-HhCCCceeeec
Confidence            456789999999999999999999999 9999999999999999987 89999999999 89999988753

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0

Probab=99.46  E-value=2.7e-13  Score=86.89  Aligned_cols=68  Identities=22%  Similarity=0.336  Sum_probs=61.6

Q ss_pred             CceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEcC
Q 032393           28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELIS   96 (142)
Q Consensus        28 ~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aelis   96 (142)
                      +.++.|.|. |+|.+|+.+|+++|++++||.++.+|+.+++++|.++  .+++..|..+|+ .+||.+.+++
T Consensus         1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~   71 (74)
T 3dxs_X            1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIE-DAGFEAEILA   71 (74)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHTCEEEEEE
T ss_pred             CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HCCCceEEcc
Confidence            356789995 9999999999999999999999999999999999754  368999999999 8999998875

>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A

Probab=99.46  E-value=5.2e-13  Score=84.30  Aligned_cols=66  Identities=21%  Similarity=0.468  Sum_probs=59.8

Q ss_pred             ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc-CCCHHHHHHHHHhccCCcEEEc
Q 032393           29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK-TADPIKVCERLQKKSGRKVELI   95 (142)
Q Consensus        29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~-~vd~~~I~~~I~kk~G~~aeli   95 (142)
                      +++.|.|+ |+|.+|+.+|+++|.+++||.++.+|+.+++++|.+. .+++..|..+|. .+||.+.++
T Consensus         2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~Gy~~~~~   69 (69)
T 4a4j_A            2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVE-RAGYHARVL   69 (69)
T ss_dssp             EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHH-HTTCEEEEC
T ss_pred             CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHH-HcCCceEeC
Confidence            46789996 9999999999999999999999999999999999832 389999999999 899998864

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.39  E-value=3.1e-12  Score=87.88  Aligned_cols=73  Identities=23%  Similarity=0.382  Sum_probs=66.7

Q ss_pred             CCceEEEEEeccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEEEcCCCCCC
Q 032393           27 ETPEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELISPLPKP  101 (142)
Q Consensus        27 ~~~~i~lkV~M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~aelis~~p~~  101 (142)
                      ...++.|.|+|+|.+|+.+|+++|.+++||.++.+|+.+++++|.+. +++..|..+|. ++||.+.++......
T Consensus        17 ~~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~-~~~~~i~~~i~-~~Gy~~~~~~~~~~~   89 (98)
T 2crl_A           17 TLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTT-LPSQEVQALLE-GTGRQAVLKGMGSGQ   89 (98)
T ss_dssp             CCEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEES-SCHHHHHHHHH-TTTSCEEEEESCCCC
T ss_pred             cceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEe-CCHHHHHHHHH-HhCCceEEccCCCCc
Confidence            45667899999999999999999999999999999999999999987 89999999999 899999998876644

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}

Probab=99.39  E-value=1.2e-12  Score=84.35  Aligned_cols=67  Identities=24%  Similarity=0.390  Sum_probs=62.0

Q ss_pred             CCceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEEEcCC
Q 032393           27 ETPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELISP   97 (142)
Q Consensus        27 ~~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~aelis~   97 (142)
                      .+.+++|.|. |+|.+|+.+|+++|.+ +||..+.+|+.+++++|.++  ++..|..+|+ .+||.+.++++
T Consensus         3 ~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~--~~~~i~~~i~-~~Gy~~~~~~~   70 (73)
T 3fry_A            3 SVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE--DVDKYIKAVE-AAGYQAKLRSS   70 (73)
T ss_dssp             CCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG--GHHHHHHHHH-HTTCEEEECCS
T ss_pred             ccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC--CHHHHHHHHH-HcCCceEecCc
Confidence            4567899996 9999999999999999 99999999999999999987  8999999999 89999998874

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A

Probab=99.29  E-value=9.4e-12  Score=77.46  Aligned_cols=62  Identities=32%  Similarity=0.635  Sum_probs=57.1

Q ss_pred             EEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEEEc
Q 032393           32 VLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELI   95 (142)
Q Consensus        32 ~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~aeli   95 (142)
                      .|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.+. +++..|...|. .+||.+..+
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~-~~~~~i~~~i~-~~Gy~~~~~   65 (66)
T 2roe_A            3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGT-ADPKALVQAVE-EEGYKAEVL   65 (66)
T ss_dssp             CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSC-CCHHHHHHHHH-TTTCEEEEC
T ss_pred             EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCC-CCHHHHHHHHH-HcCCCcEec
Confidence            58895 9999999999999999999999999999999999665 89999999999 899988765

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A

Probab=99.26  E-value=4.6e-11  Score=74.15  Aligned_cols=66  Identities=23%  Similarity=0.476  Sum_probs=57.2

Q ss_pred             ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc-CCCHHHHHHHHHhccCCcEEEc
Q 032393           29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK-TADPIKVCERLQKKSGRKVELI   95 (142)
Q Consensus        29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~-~vd~~~I~~~I~kk~G~~aeli   95 (142)
                      ..+.|.|. |+|.+|+..|+++|..++||.++.+|+.+++++|.++ .++...|...|. .+||.+.++
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~~~~   70 (71)
T 2xmw_A            3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVE-RAGYHARVL   70 (71)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHH-HHTCEEEEE
T ss_pred             cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHH-HcCCCceeC
Confidence            35679996 9999999999999999999999999999999999754 267888999999 899987654

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A

Probab=99.25  E-value=1.1e-11  Score=75.54  Aligned_cols=61  Identities=25%  Similarity=0.432  Sum_probs=56.1

Q ss_pred             eEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcE
Q 032393           30 EIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKV   92 (142)
Q Consensus        30 ~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~a   92 (142)
                      ++.|.|. |+|.+|+.+|+++|..++||.++.+|+.+++++|.+. .+...|...|. .+||.+
T Consensus         2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~-~~~~~i~~~i~-~~G~~~   63 (64)
T 2xmm_A            2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSA-LGEEQLRTAIA-SAGYEV   63 (64)
T ss_dssp             CEEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECS-SCHHHHHHHHH-HTTCCC
T ss_pred             eEEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEec-CCHHHHHHHHH-HcCCCC
Confidence            3578895 9999999999999999999999999999999999986 89999999999 899964

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A

Probab=99.25  E-value=6e-11  Score=74.98  Aligned_cols=67  Identities=31%  Similarity=0.433  Sum_probs=58.3

Q ss_pred             CceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEEEc
Q 032393           28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELI   95 (142)
Q Consensus        28 ~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~aeli   95 (142)
                      +.++.|.|. |+|.+|+..|+++|.+++||.++.+|+.+++++|.++......|...|. .+||.+...
T Consensus         2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~-~~Gy~~~~~   69 (73)
T 1mwy_A            2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQ-KAGYSLRDE   69 (73)
T ss_dssp             CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHH-HHTCEEEEC
T ss_pred             CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHH-HcCCccccc
Confidence            567789996 9999999999999999999999999999999999876224678889998 899987643

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A

Probab=99.24  E-value=5.5e-11  Score=74.16  Aligned_cols=66  Identities=21%  Similarity=0.378  Sum_probs=58.4

Q ss_pred             ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEc
Q 032393           29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELI   95 (142)
Q Consensus        29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aeli   95 (142)
                      +.+.|.|. |+|.+|+..|+++|..++||.++.+|+.+++++|.++  .++...|...|. .+||.+.+.
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~   71 (72)
T 1aw0_A            3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE-DMGFDATLS   71 (72)
T ss_dssp             EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCEEEEC
T ss_pred             eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHH-HCCCCcEeC
Confidence            45689995 9999999999999999999999999999999999764  257889999999 899987654

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A

Probab=99.24  E-value=3.5e-11  Score=75.04  Aligned_cols=66  Identities=23%  Similarity=0.372  Sum_probs=58.2

Q ss_pred             ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEc
Q 032393           29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELI   95 (142)
Q Consensus        29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aeli   95 (142)
                      ..+.|.|. |+|.+|+.+|+++|..++||.++.+|+.++.++|.++  .++...|...|. .+||.+.+.
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~   71 (72)
T 1osd_A            3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATA-DAGYPSSVK   71 (72)
T ss_dssp             EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHH-HTTCCCEEC
T ss_pred             eEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-hcCCCeEec
Confidence            45789995 9999999999999999999999999999999999753  368889999999 899987653

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}

Probab=99.24  E-value=5e-11  Score=74.32  Aligned_cols=64  Identities=19%  Similarity=0.416  Sum_probs=57.0

Q ss_pred             CceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcE
Q 032393           28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKV   92 (142)
Q Consensus        28 ~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~a   92 (142)
                      +.++.|.|. |+|.+|+..|+++|.+++||.++.+|+.+++++|.++  .++...|...|. .+||.+
T Consensus         4 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~   70 (71)
T 2l3m_A            4 MEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIE-DQGYDV   70 (71)
T ss_dssp             EEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHH-HTTCEE
T ss_pred             cEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCC
Confidence            456789996 9999999999999999999999999999999999743  368889999999 899975

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A

Probab=99.22  E-value=6.2e-11  Score=79.33  Aligned_cols=69  Identities=17%  Similarity=0.366  Sum_probs=60.3

Q ss_pred             eEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhcc---CCcEEEcCCCC
Q 032393           30 EIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKS---GRKVELISPLP   99 (142)
Q Consensus        30 ~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~---G~~aelis~~p   99 (142)
                      ++.|.|. |+|.+|+.+|+++|..++||.++.+|+.+++++|.++  .+++..|..+|. .+   ||.+.++++..
T Consensus         4 ~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~-~~g~Ggy~~~~~~~~~   78 (90)
T 2g9o_A            4 TATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIE-AVSPGLYRVSITSEVE   78 (90)
T ss_dssp             EEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHH-TTSTTTCEEECCCCC-
T ss_pred             EEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHH-hccCCCeEEEEeCCCc
Confidence            4679996 9999999999999999999999999999999999753  367889999999 89   59998887653

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1

Probab=99.22  E-value=6.6e-11  Score=72.82  Aligned_cols=63  Identities=25%  Similarity=0.538  Sum_probs=56.6

Q ss_pred             EEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEc
Q 032393           32 VLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELI   95 (142)
Q Consensus        32 ~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aeli   95 (142)
                      .|.|. |+|.+|+..|+++|.+++||.++.+|+.+++++|.++  .++...|...|. .+||.+.++
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~   68 (68)
T 1cpz_A            3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAIN-ELGYQAEVI   68 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-TTSSCEEEC
T ss_pred             EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCcccC
Confidence            58895 9999999999999999999999999999999999754  368889999999 899988764

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A

Probab=99.21  E-value=9.9e-11  Score=73.99  Aligned_cols=66  Identities=15%  Similarity=0.365  Sum_probs=58.5

Q ss_pred             eEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEcC
Q 032393           30 EIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELIS   96 (142)
Q Consensus        30 ~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aelis   96 (142)
                      .+.|.|. |+|.+|+..|+++|..++||.++.+|+.+++++|.++  .++...|...|. .+||.+.+..
T Consensus         3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~   71 (75)
T 3cjk_B            3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID-DMGFDAVIHN   71 (75)
T ss_dssp             EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HTTCCEEEEE
T ss_pred             EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEeec
Confidence            4678995 9999999999999999999999999999999999754  357889999999 8999887653

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B

Probab=99.19  E-value=8.1e-11  Score=73.35  Aligned_cols=66  Identities=21%  Similarity=0.421  Sum_probs=58.9

Q ss_pred             eEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc-CCCHHHHHHHHHhccCCcEEEcC
Q 032393           30 EIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK-TADPIKVCERLQKKSGRKVELIS   96 (142)
Q Consensus        30 ~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~-~vd~~~I~~~I~kk~G~~aelis   96 (142)
                      ++.|.|. |+|.+|+..|+++|.+++||.++.+|+.++.++|.++ .++...|...|. .+||.+.++.
T Consensus         3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~~~~~   70 (72)
T 1fvq_A            3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIE-DCGFDCEILR   70 (72)
T ss_dssp             EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHH-HHTCCEEEEE
T ss_pred             EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHH-HCCCceEEcc
Confidence            5679995 9999999999999999999999999999999999753 368889999999 8999988764

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A

Probab=99.19  E-value=1.7e-10  Score=70.33  Aligned_cols=63  Identities=22%  Similarity=0.459  Sum_probs=55.7

Q ss_pred             ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcE
Q 032393           29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKV   92 (142)
Q Consensus        29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~a   92 (142)
                      ....|.|. |+|.+|+..|+++|..++||.++.+|+.+++++|.++  .++...|...|. .+||.+
T Consensus         2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~   67 (69)
T 2qif_A            2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIE-DQGYDV   67 (69)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HTTCEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCc
Confidence            34679996 9999999999999999999999999999999999753  367889999999 899964

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A

Probab=99.18  E-value=7.1e-11  Score=73.37  Aligned_cols=63  Identities=24%  Similarity=0.351  Sum_probs=56.2

Q ss_pred             EEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc-CCCHHHHHHHHHhccCCcEEEc
Q 032393           32 VLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK-TADPIKVCERLQKKSGRKVELI   95 (142)
Q Consensus        32 ~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~-~vd~~~I~~~I~kk~G~~aeli   95 (142)
                      .|.|. |+|.+|+.+|+++|..++||.++.+|+.+++++|.++ ..+...|...|. .+||.+.+.
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~Gy~~~~~   67 (69)
T 2kt2_A            3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVA-GLGYKATLA   67 (69)
T ss_dssp             CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHH-TTTSEEECC
T ss_pred             EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHH-HCCCceEeC
Confidence            58885 9999999999999999999999999999999999754 357889999999 899987654

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A

Probab=99.18  E-value=6.3e-11  Score=75.60  Aligned_cols=69  Identities=23%  Similarity=0.397  Sum_probs=60.6

Q ss_pred             CceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEcCC
Q 032393           28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELISP   97 (142)
Q Consensus        28 ~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aelis~   97 (142)
                      +.++.|.|. |+|.+|+..|+++|..++||.++.+|+.+++++|.++  .+++..|...|. .+||.+.++..
T Consensus         2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~   73 (77)
T 1y3j_A            2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIR-ELGFGATVIEN   73 (77)
T ss_dssp             CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHH-HHTSCEEEESC
T ss_pred             CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEECCc
Confidence            456789995 9999999999999999999999999999999999754  367889999999 89999887653

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A

Probab=99.18  E-value=8.7e-11  Score=76.86  Aligned_cols=70  Identities=13%  Similarity=0.258  Sum_probs=61.2

Q ss_pred             CceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEcCCC
Q 032393           28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELISPL   98 (142)
Q Consensus        28 ~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aelis~~   98 (142)
                      ...+.|.|. |+|.+|+.+|+++|..++||.++.+|+.+++++|.++  .++...|...|. .+||.+.++...
T Consensus         8 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~~   80 (84)
T 1q8l_A            8 EVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIE-AMGFPAFVKKQP   80 (84)
T ss_dssp             CEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHH-HTTCCEECSCCT
T ss_pred             ceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEecCCc
Confidence            346789995 9999999999999999999999999999999999764  368889999999 899998776643

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A

Probab=99.17  E-value=1.6e-10  Score=72.32  Aligned_cols=68  Identities=29%  Similarity=0.489  Sum_probs=59.6

Q ss_pred             CCceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEc
Q 032393           27 ETPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELI   95 (142)
Q Consensus        27 ~~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aeli   95 (142)
                      ++..+.|.|. |+|.+|+..|+++|..++||.++.+|+.++.++|.++  .++...|...|. .+||.+.++
T Consensus         4 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~   74 (76)
T 1opz_A            4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE-KLGYHVVIE   74 (76)
T ss_dssp             CCEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHTCEEECC
T ss_pred             cceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HCCCceecC
Confidence            4566789996 9999999999999999999999999999999999753  367889999999 899987654

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A

Probab=99.16  E-value=1.1e-10  Score=74.71  Aligned_cols=68  Identities=15%  Similarity=0.349  Sum_probs=60.1

Q ss_pred             CceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEcC
Q 032393           28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELIS   96 (142)
Q Consensus        28 ~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aelis   96 (142)
                      ...+.|.|. |+|.+|+.+|+++|..++||.++.+|+.+++++|.++  .++...|...|. .+||.+.+.+
T Consensus         7 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~   77 (79)
T 1kvi_A            7 VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID-DMGFDAVIHN   77 (79)
T ss_dssp             CEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHCCCEEECC
T ss_pred             cEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HCCCceEecC
Confidence            456789995 9999999999999999999999999999999999754  357889999999 8999987764

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}

Probab=99.15  E-value=1.3e-10  Score=71.49  Aligned_cols=65  Identities=25%  Similarity=0.462  Sum_probs=57.0

Q ss_pred             CceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEE
Q 032393           28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVE   93 (142)
Q Consensus        28 ~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~ae   93 (142)
                      +.++.|.|. |+|.+|+..|+++|..++||.++.+|+.+++++|.++  .++...|...|. .+||.+.
T Consensus         2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~   69 (71)
T 2ldi_A            2 LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIA-ALGYTLA   69 (71)
T ss_dssp             CEEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHH-TTTCEEE
T ss_pred             cEEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCcc
Confidence            445789996 9999999999999999999999999999999999754  357788999999 8999764

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}

Probab=99.15  E-value=6.3e-11  Score=79.20  Aligned_cols=64  Identities=23%  Similarity=0.393  Sum_probs=58.0

Q ss_pred             CCceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcE
Q 032393           27 ETPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKV   92 (142)
Q Consensus        27 ~~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~a   92 (142)
                      .+..+.|.|. |+|.+|+..|+++|..++||.++.+|+.+++++|.+. +++..|..+|. .+||.+
T Consensus        20 ~~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~-~~~~~i~~~i~-~~Gy~~   84 (85)
T 2k2p_A           20 QGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGV-SDAAHIAEIIT-AAGYTP   84 (85)
T ss_dssp             --CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESC-CCHHHHHHHHH-HTTCCC
T ss_pred             cccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEec-CCHHHHHHHHH-HcCCCC
Confidence            4567789995 9999999999999999999999999999999999987 89999999999 899964

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A

Probab=99.14  E-value=2e-10  Score=72.08  Aligned_cols=67  Identities=19%  Similarity=0.338  Sum_probs=58.1

Q ss_pred             ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEcC
Q 032393           29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELIS   96 (142)
Q Consensus        29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aelis   96 (142)
                      ..+.|.|. |+|.+|+..|+++|..++||.++.+|+.+++++|.++  .+++..|...|. .+||.+.+..
T Consensus         4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~~   73 (75)
T 1yjr_A            4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIE-SLGFEPSLVK   73 (75)
T ss_dssp             CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHH-HHHCEEEESS
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCceeec
Confidence            34679996 9999999999999999999999999999999999764  246678899998 8999887654

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}

Probab=99.14  E-value=1.2e-10  Score=71.19  Aligned_cols=62  Identities=26%  Similarity=0.413  Sum_probs=54.7

Q ss_pred             eEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc-CCCHHHHHHHHHhccCCcE
Q 032393           30 EIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK-TADPIKVCERLQKKSGRKV   92 (142)
Q Consensus        30 ~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~-~vd~~~I~~~I~kk~G~~a   92 (142)
                      ++.|.|. |+|.+|+..|+++|..++||.++.+|+.+++++|.++ ..+...|...|. .+||.+
T Consensus         2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~   65 (66)
T 1yg0_A            2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALL-DAGQEV   65 (66)
T ss_dssp             EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHH-HHTCCC
T ss_pred             eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHH-HcCCCc
Confidence            4578885 9999999999999999999999999999999999754 247888999998 899864

>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}

Probab=99.12  E-value=9.9e-11  Score=73.09  Aligned_cols=62  Identities=27%  Similarity=0.440  Sum_probs=54.7

Q ss_pred             eEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEEEc
Q 032393           30 EIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELI   95 (142)
Q Consensus        30 ~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~aeli   95 (142)
                      ++.|.|. |+|.+|+.+|+++|.++ ||.++.+|+.+++++|.++ .+ ..|...|. .+||.+..+
T Consensus         2 ~~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~-~~-~~i~~~i~-~~Gy~~~~~   64 (67)
T 2kyz_A            2 RYVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETE-NL-DSVLKKLE-EIDYPVESY   64 (67)
T ss_dssp             EEEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECS-CH-HHHHHHHH-TTTCCCCBC
T ss_pred             eEEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEEC-CH-HHHHHHHH-HcCCceeeE
Confidence            3578995 99999999999999999 9999999999999999887 45 88999998 899976543

>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A

Probab=99.12  E-value=2.7e-10  Score=72.48  Aligned_cols=68  Identities=25%  Similarity=0.428  Sum_probs=59.6

Q ss_pred             ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEcCC
Q 032393           29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELISP   97 (142)
Q Consensus        29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aelis~   97 (142)
                      ..+.|.|. |+|.+|+..|+++|..++||.++.+|+.++.++|.++  .++...|...|. .+||.+.++..
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~~~   73 (80)
T 1jww_A            3 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD-KLGYKLKLKGE   73 (80)
T ss_dssp             EEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHH-HHTSEEEECCS
T ss_pred             eEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCeEEecCc
Confidence            45679996 9999999999999999999999999999999999753  367888999998 89999877653

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}

Probab=99.11  E-value=4.5e-10  Score=75.28  Aligned_cols=72  Identities=14%  Similarity=0.237  Sum_probs=62.9

Q ss_pred             CCceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEcCCCC
Q 032393           27 ETPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELISPLP   99 (142)
Q Consensus        27 ~~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aelis~~p   99 (142)
                      .+..+.|.|. |+|.+|+..|+++|..++||.++.+|+..+.++|.++  .++...|...|. .+||.+.++..+.
T Consensus        14 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~~~   88 (95)
T 2kkh_A           14 KLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALN-EARLEANVRVNGE   88 (95)
T ss_dssp             CSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCCEEESCCCC
T ss_pred             ceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCceEEecCCC
Confidence            4667889995 9999999999999999999999999999999999754  257889999999 8999988776543

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=99.09  E-value=3.8e-10  Score=80.05  Aligned_cols=66  Identities=21%  Similarity=0.374  Sum_probs=59.3

Q ss_pred             ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEc
Q 032393           29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELI   95 (142)
Q Consensus        29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aeli   95 (142)
                      ..+.|.|. |+|.+|+++|+++|.+++||.++.+|+.+++++|.++  .+++..|..+|. .+||.+.++
T Consensus        80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~  148 (149)
T 2ew9_A           80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIE-EIGFHASLA  148 (149)
T ss_dssp             SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHH-HHTCEEECC
T ss_pred             ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHH-hCCCceEec
Confidence            46789995 9999999999999999999999999999999999864  368899999999 899987654

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=99.08  E-value=3.9e-10  Score=88.61  Aligned_cols=70  Identities=20%  Similarity=0.418  Sum_probs=63.9

Q ss_pred             ceEEEEEeccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEEEcCCCCC
Q 032393           29 PEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELISPLPK  100 (142)
Q Consensus        29 ~~i~lkV~M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~aelis~~p~  100 (142)
                      .++.|.|+|+|.+|+.+|+++|.+++||.++.+|+.+++++|.+. +++..|..+|+ ++||.+.++...+.
T Consensus         6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~-~~~~~I~~aI~-~~Gy~a~~~~~~~~   75 (222)
T 1qup_A            6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS-VAPSTIINTLR-NCGKDAIIRGAGKP   75 (222)
T ss_dssp             EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES-SCHHHHHHHHH-HTTCCCEEECCSCT
T ss_pred             eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEecc-CCHHHHHHHHH-HcCCccccccCCCc
Confidence            456788889999999999999999999999999999999999987 89999999999 89999988876553

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=99.06  E-value=4.6e-10  Score=80.08  Aligned_cols=69  Identities=25%  Similarity=0.414  Sum_probs=61.5

Q ss_pred             ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEcCCC
Q 032393           29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELISPL   98 (142)
Q Consensus        29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aelis~~   98 (142)
                      ..+.|.|. |+|.+|+++|+++|.+++||.++.+|+.+++++|.++  .+++..|..+|. .+||.+.+++..
T Consensus        74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~~  145 (151)
T 1p6t_A           74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD-KLGYKLKLKGEQ  145 (151)
T ss_dssp             EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCCEEESCSS
T ss_pred             cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCCeEEcCcc
Confidence            45789995 9999999999999999999999999999999999753  368999999999 899999887654

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=98.97  E-value=1.2e-09  Score=87.26  Aligned_cols=70  Identities=21%  Similarity=0.433  Sum_probs=63.5

Q ss_pred             CceEEEEEeccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEEEcCCCC
Q 032393           28 TPEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELISPLP   99 (142)
Q Consensus        28 ~~~i~lkV~M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~aelis~~p   99 (142)
                      ..++.|.|.|+|.+|+.+|+++|.+++||.++.+|+.+++++|.+. +++..|..+|. .+||.+.++...+
T Consensus         6 ~~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~-~~~~~I~~aIe-~~Gy~a~~~~~~~   75 (249)
T 1jk9_B            6 TYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS-VAPSTIINTLR-NCGKDAIIRGAGK   75 (249)
T ss_dssp             CEEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES-SCHHHHHHHHH-TTTCCCEEEEESS
T ss_pred             ceeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecC-CCHHHHHHHHH-HhCCCcccccCCc
Confidence            3456788889999999999999999999999999999999999987 89999999999 8999998877544

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=98.94  E-value=3.2e-09  Score=80.24  Aligned_cols=69  Identities=16%  Similarity=0.370  Sum_probs=59.8

Q ss_pred             ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEcCCC
Q 032393           29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELISPL   98 (142)
Q Consensus        29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aelis~~   98 (142)
                      .++.|.|. |+|.+|+.+|+++|.+++||.++.+|+..++++|.++  .+++..|...|. .+||.+.++...
T Consensus       122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~~  193 (202)
T 2rop_A          122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIE-DMGFEASVVSES  193 (202)
T ss_dssp             EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTSCEEEC---
T ss_pred             eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCceEEcCCC
Confidence            45789995 9999999999999999999999999999999999753  368899999999 899999887653

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=98.91  E-value=6.1e-09  Score=73.70  Aligned_cols=68  Identities=21%  Similarity=0.415  Sum_probs=60.0

Q ss_pred             CceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEcC
Q 032393           28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELIS   96 (142)
Q Consensus        28 ~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aelis   96 (142)
                      +.++.|.|. |+|.+|+..|+++|..++||.++.+|+.+++++|.++  ..++..|...|. .+||.+.++.
T Consensus         3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~~   73 (149)
T 2ew9_A            3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQ-DLGFEAAVME   73 (149)
T ss_dssp             CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCEEEECS
T ss_pred             cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHh-cCCCceEeec
Confidence            567889995 9999999999999999999999999999999999753  367888999999 8999887654

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A

Probab=98.86  E-value=4e-09  Score=66.20  Aligned_cols=57  Identities=33%  Similarity=0.598  Sum_probs=49.7

Q ss_pred             eEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcE
Q 032393           30 EIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKV   92 (142)
Q Consensus        30 ~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~a   92 (142)
                      ++.|.|. |+|.+|+..|+++|..++||.++.+|+..++++|.++ .+    ...|. .+||.+
T Consensus         4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~-~~----~~~i~-~~Gy~~   61 (71)
T 2aj0_A            4 KTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGE-AS----IQQVE-QAGAFE   61 (71)
T ss_dssp             EEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEES-CC----HHHHH-HHHTTT
T ss_pred             EEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEec-Cc----HHHHH-HhCCCc
Confidence            5679996 9999999999999999999999999999999999887 44    45667 788753

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=98.65  E-value=9.6e-08  Score=72.00  Aligned_cols=68  Identities=22%  Similarity=0.422  Sum_probs=56.4

Q ss_pred             CCceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhcc---CCcEEEc
Q 032393           27 ETPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKS---GRKVELI   95 (142)
Q Consensus        27 ~~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~---G~~aeli   95 (142)
                      .+.++.|.|. |+|.+|+.+|+++|..++||.++.+|+..++++|.++  .+++..|...|. .+   ||.+.+.
T Consensus        18 ~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~~~gg~~v~~~   91 (202)
T 2rop_A           18 HVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIE-ALPPGNFKVSLP   91 (202)
T ss_dssp             --CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHT-TSSSSCSEEEC-
T ss_pred             ccEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HhccCCeEEEec
Confidence            4567889996 9999999999999999999999999999999999754  367888999998 77   3665433

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=98.55  E-value=3e-07  Score=65.28  Aligned_cols=64  Identities=30%  Similarity=0.510  Sum_probs=55.3

Q ss_pred             CceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcE
Q 032393           28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKV   92 (142)
Q Consensus        28 ~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~a   92 (142)
                      .....|.|. |+|.+|+..|++.|..++||.++.+++..++++|.++  ..+...|...+. .+||.+
T Consensus         5 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~   71 (151)
T 1p6t_A            5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE-KLGYHV   71 (151)
T ss_dssp             CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHH-HHTCEE
T ss_pred             ceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHH-HcCCcc
Confidence            345679996 9999999999999999999999999999999998643  357888999998 899864

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.53  E-value=2.3e-07  Score=83.25  Aligned_cols=64  Identities=19%  Similarity=0.378  Sum_probs=58.0

Q ss_pred             ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEE
Q 032393           29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVE   93 (142)
Q Consensus        29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~ae   93 (142)
                      .++.|.|+ |+|.+|+.+|+++|.+++||.++.+|+.+++++|.++  .++++.|..+|. .+||.+.
T Consensus         2 m~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~-~~Gy~~~   68 (723)
T 3j09_A            2 MERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIE-DLGYGVV   68 (723)
T ss_dssp             CCEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHCCEES
T ss_pred             eeEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHH-hcCCccc
Confidence            35789996 9999999999999999999999999999999999754  368999999999 8999874

>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}

Probab=91.25  E-value=1.1  Score=30.67  Aligned_cols=67  Identities=15%  Similarity=0.326  Sum_probs=49.1

Q ss_pred             CceEEEEEe--ccchhHHHHHHHHhhCCCCccEEEEec-----CCC--EEEEeccCCCHHHHHHHHHhccCCcEEEcC
Q 032393           28 TPEIVLKVD--MHCEACARKVARALKGFEGVDDITADS-----KAS--KVVVKGKTADPIKVCERLQKKSGRKVELIS   96 (142)
Q Consensus        28 ~~~i~lkV~--M~C~~Ca~kIekaL~~i~GV~~V~vd~-----~~~--kVtV~g~~vd~~~I~~~I~kk~G~~aelis   96 (142)
                      ..+++|.|.  +|-+.-. .+-..|..++||..|++..     .+.  +++|.|+.++.+.|.++|. .+|-.++-+.
T Consensus         4 irRlVLDVlKP~h~P~iv-d~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE-~~Gg~IHSID   79 (96)
T 2x3d_A            4 IRRLVLDVLKPIRGTSIV-DLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLE-EEGCAIHSID   79 (96)
T ss_dssp             EEEEEEEEEEESSSSCHH-HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHH-HTTCEEEEEE
T ss_pred             eEEEEEEcccCCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEEeee
Confidence            456777773  5666655 6778899999988877654     444  3455687799999999999 8998776543

>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1

Probab=88.55  E-value=0.8  Score=31.46  Aligned_cols=67  Identities=16%  Similarity=0.295  Sum_probs=47.3

Q ss_pred             CceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEec-----CCCEE--EEeccCCCHHHHHHHHHhccCCcEEEcC
Q 032393           28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADS-----KASKV--VVKGKTADPIKVCERLQKKSGRKVELIS   96 (142)
Q Consensus        28 ~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~-----~~~kV--tV~g~~vd~~~I~~~I~kk~G~~aelis   96 (142)
                      ..+++|.|. -|-+.-. .+-..|..++||..|++..     .+..+  +|.|+.++.+.|..+|. .+|-.++-+.
T Consensus         6 irRlVLDVlKPh~p~i~-d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE-~~Gg~IHSID   80 (97)
T 2raq_A            6 LIRIVLDILKPHEPIIP-EYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIE-SYGGSIHSVD   80 (97)
T ss_dssp             EEEEEEEEECCSCSCHH-HHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHH-HTTCEEEEEE
T ss_pred             ceEEEEEecCCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEEeee
Confidence            456777774 4544443 5667788889987776544     44444  45687799999999999 8998776543

>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1

Probab=87.77  E-value=0.83  Score=31.52  Aligned_cols=66  Identities=20%  Similarity=0.243  Sum_probs=47.1

Q ss_pred             CceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEec-----CCC--EEEEeccCCCHHHHHHHHHhccCCcEEEc
Q 032393           28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADS-----KAS--KVVVKGKTADPIKVCERLQKKSGRKVELI   95 (142)
Q Consensus        28 ~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~-----~~~--kVtV~g~~vd~~~I~~~I~kk~G~~aeli   95 (142)
                      ..+++|.|. -|-+.-. .+-..|..++||..|++..     .+.  +++|.|+.+|.+.|.++|. .+|-.++-+
T Consensus         6 iRRlVLDVlKPh~P~iv-dlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE-~~GgvIHSI   79 (100)
T 3bpd_A            6 LRRLVLDVLKPHEPKTI-VFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIE-DMGGVIHSV   79 (100)
T ss_dssp             EEEEEEEEEEESCSCHH-HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHH-TTTCEEEEE
T ss_pred             ceEEEEEecCCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEEee
Confidence            456777774 4444443 6778899999988876654     444  3445687799999999999 899776644

>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*

Probab=80.07  E-value=1.7  Score=29.24  Aligned_cols=35  Identities=17%  Similarity=0.477  Sum_probs=26.9

Q ss_pred             eEEEEEeccchhHH------HHHHHHhhCCCCccEEEEecC
Q 032393           30 EIVLKVDMHCEACA------RKVARALKGFEGVDDITADSK   64 (142)
Q Consensus        30 ~i~lkV~M~C~~Ca------~kIekaL~~i~GV~~V~vd~~   64 (142)
                      .+.+.+.+++++|.      ..|+.+|..++||.+|.+++.
T Consensus        42 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~   82 (103)
T 3cq1_A           42 RAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVT   82 (103)
T ss_dssp             EEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEEC
T ss_pred             EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEe
Confidence            45566667777774      578999999999999988753

>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0

Probab=80.04  E-value=1.5  Score=29.88  Aligned_cols=36  Identities=19%  Similarity=0.363  Sum_probs=26.9

Q ss_pred             eEEEEEeccchhH------HHHHHHHh-hCCCCccEEEEecCC
Q 032393           30 EIVLKVDMHCEAC------ARKVARAL-KGFEGVDDITADSKA   65 (142)
Q Consensus        30 ~i~lkV~M~C~~C------a~kIekaL-~~i~GV~~V~vd~~~   65 (142)
                      .+.+.+.+++++|      ...|+.+| ..++||.+|.|++..
T Consensus        45 ~V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~~   87 (108)
T 3lno_A           45 NAVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVVW   87 (108)
T ss_dssp             CEEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEECC
T ss_pred             eEEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEEe
Confidence            4566666666666      55788889 899999988877643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	142
d1qupa2	72	d.58.17.1 (A:2-73) Copper chaperone for superoxide	5e-11
d1fe0a_	66	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	3e-09
d1kvja_	79	d.58.17.1 (A:) Menkes copper-transporting ATPase {	4e-07
d2ggpb1	72	d.58.17.1 (B:1-72) Copper transporter domain ccc2a	4e-07
d2aw0a_	72	d.58.17.1 (A:) Menkes copper-transporting ATPase {	5e-07
d1p6ta1	72	d.58.17.1 (A:1-72) Potential copper-translocating	1e-06
d1osda_	72	d.58.17.1 (A:) Mercuric ion binding protein MerP {	2e-06
d1mwza_	73	d.58.17.1 (A:) Metal ion-transporting ATPase ZntA,	5e-06
d1cc8a_	72	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	6e-06
d1sb6a_	64	d.58.17.1 (A:) Copper chaperone {Synechocystis sp.	3e-05
d1cpza_	68	d.58.17.1 (A:) Copper chaperone {Enterococcus hira	5e-05
d1p6ta2	79	d.58.17.1 (A:73-151) Potential copper-translocatin	9e-05
d2qifa1	69	d.58.17.1 (A:1-69) Copper chaperone {Bacillus subt	1e-04
d1q8la_	84	d.58.17.1 (A:) Menkes copper-transporting ATPase {	0.003

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.9 bits (127), Expect = 5e-11
 Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 27 ETPEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQK 86
          +T E    + MHCE C   +   LK   G++ +  D +   + V+  +  P  +   L +
Sbjct: 4  DTYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVES-SVAPSTIINTL-R 61

Query: 87 KSGRKVEL 94
            G+   +
Sbjct: 62 NCGKDAII 69

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Length = 66

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

 Score = 48.3 bits (115), Expect = 3e-09
 Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 29 PEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKS 88
          P+    VDM C  CA  V+R L    G      D    KV ++        +   L KK+
Sbjct: 1  PKHEFSVDMTCGGCAEAVSRVLNKLGG-VKYDIDLPNKKVCIES-EHSMDTLLATL-KKT 57

Query: 89 GRKVELI 95
          G+ V  +
Sbjct: 58 GKTVSYL 64

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (101), Expect = 4e-07
 Identities = 12/71 (16%), Positives = 25/71 (35%), Gaps = 4/71 (5%)

Query: 30 EIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVK--GKTADPIKVCERLQK 86
           + + V+ M C +C   + + +    GV  I    +     +    K   P  + E +  
Sbjct: 9  SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAI-D 67

Query: 87 KSGRKVELISP 97
            G    + +P
Sbjct: 68 DMGFDAVIHNP 78

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.8 bits (101), Expect = 4e-07
 Identities = 13/68 (19%), Positives = 25/68 (36%), Gaps = 1/68 (1%)

Query: 30 EIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKS 88
          E++L V  M C AC   +   L+  +GV         ++  V           + + +  
Sbjct: 3  EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDC 62

Query: 89 GRKVELIS 96
          G   E++ 
Sbjct: 63 GFDCEILR 70

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (100), Expect = 5e-07
 Identities = 13/62 (20%), Positives = 23/62 (37%), Gaps = 3/62 (4%)

Query: 28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVK--GKTADPIKVCERL 84
          T E V+ +D M C +C + +   +    GV  I      S   V+       P  +   +
Sbjct: 2  TQETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAI 61

Query: 85 QK 86
          + 
Sbjct: 62 ED 63

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 41.7 bits (98), Expect = 1e-06
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 3/63 (4%)

Query: 27 ETPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVK--GKTADPIKVCER 83
          E  EI ++V  M C ACA ++ + LK   GV D   +     V V           + E+
Sbjct: 4  EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEK 63

Query: 84 LQK 86
          ++K
Sbjct: 64 IEK 66

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

 Score = 40.9 bits (96), Expect = 2e-06
 Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 3/62 (4%)

Query: 28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVK--GKTADPIKVCERL 84
          T  + L V  M C AC   V +A+   EGV  +    +  + VV          K+ +  
Sbjct: 2  TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKAT 61

Query: 85 QK 86
            
Sbjct: 62 AD 63

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 73

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

 Score = 39.8 bits (93), Expect = 5e-06
 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 31 IVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQK 86
             KV  M C ACARKV  A++   GV+ +       K+VV        +V   LQK
Sbjct: 5  YSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQK 61

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.8 bits (93), Expect = 6e-06
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 27 ETPEIVLKVDMHCEACARKVARALKGFE-GVDDITADSKASKVVVKGKTADPIKVCERLQ 85
          E       V M C  C+  V + L   E  V  I    +   V V   T     + E++ 
Sbjct: 2  EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYT-TLPYDFILEKI- 59

Query: 86 KKSGRKV 92
          KK+G++V
Sbjct: 60 KKTGKEV 66

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Length = 64

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

 Score = 37.6 bits (87), Expect = 3e-05
 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 3/64 (4%)

Query: 31 IVLKV-DMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSG 89
          I L V  + CEACA  V +A++  +    +  D  + KV +        ++   +   +G
Sbjct: 3  IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSA-LGEEQLRTAI-ASAG 60

Query: 90 RKVE 93
           +VE
Sbjct: 61 HEVE 64

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Length = 68

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

 Score = 37.1 bits (86), Expect = 5e-05
 Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 4/66 (6%)

Query: 33 LKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVK--GKTADPIKVCERLQKKSG 89
            V  M C  C  ++  A+    GV  +    K  K VVK         ++C+ +  + G
Sbjct: 4  FSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAI-NELG 62

Query: 90 RKVELI 95
           + E+I
Sbjct: 63 YQAEVI 68

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 36.8 bits (85), Expect = 9e-05
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 4/72 (5%)

Query: 28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVK--GKTADPIKVCERL 84
          T +    ++ M C ACA ++ + L   EGV +   +     V V+   K A    + E +
Sbjct: 1  TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAV 60

Query: 85 QKKSGRKVELIS 96
            K G K++L  
Sbjct: 61 -DKLGYKLKLKG 71

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Length = 69

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

 Score = 35.9 bits (83), Expect = 1e-04
 Identities = 12/60 (20%), Positives = 27/60 (45%), Gaps = 3/60 (5%)

Query: 30 EIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVK--GKTADPIKVCERLQK 86
          +  L+V+ M C+ C + V  ++   +GV  +  + +A KV V           + + ++ 
Sbjct: 3  QKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIED 62

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 84

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.6 bits (74), Expect = 0.003
 Identities = 8/45 (17%), Positives = 17/45 (37%), Gaps = 1/45 (2%)

Query: 25 EEETPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKV 68
          +     + +KV+ M C +C   +   +   +GV  I       + 
Sbjct: 5  QAGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEA 49

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	142
d1fe0a_	66	ATX1 metallochaperone protein (ATOX1) {Human (Homo	99.7
d1qupa2	72	Copper chaperone for superoxide dismutase, N-termi	99.68
d1cc8a_	72	ATX1 metallochaperone protein (ATOX1) {Baker's yea	99.67
d2ggpb1	72	Copper transporter domain ccc2a {Baker's yeast (Sa	99.56
d1cpza_	68	Copper chaperone {Enterococcus hirae [TaxId: 1354]	99.55
d1osda_	72	Mercuric ion binding protein MerP {Ralstonia metal	99.54
d1sb6a_	64	Copper chaperone {Synechocystis sp. pcc 6803, Scat	99.54
d2qifa1	69	Copper chaperone {Bacillus subtilis, CopZ [TaxId:	99.53
d2aw0a_	72	Menkes copper-transporting ATPase {Human (Homo sap	99.53
d1kvja_	79	Menkes copper-transporting ATPase {Human (Homo sap	99.53
d1p6ta2	79	Potential copper-translocating P-type ATPase CopA	99.48
d1mwza_	73	Metal ion-transporting ATPase ZntA, N-terminal dom	99.48
d1q8la_	84	Menkes copper-transporting ATPase {Human (Homo sap	99.47
d1p6ta1	72	Potential copper-translocating P-type ATPase CopA	99.45
d3bpda1	91	Uncharacterized protein AF1549 {Archaeoglobus fulg	92.1
d2raqa1	93	Uncharacterized protein MTH889 {Methanobacterium t	89.67
d1uwda_	102	Hypothetical protein TM0487 {Thermotoga maritima [	82.04

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

Probab=99.70  E-value=2.2e-17  Score=106.28  Aligned_cols=64  Identities=28%  Similarity=0.490  Sum_probs=61.1

Q ss_pred             eEEEEEeccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEEEcC
Q 032393           30 EIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELIS   96 (142)
Q Consensus        30 ~i~lkV~M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~aelis   96 (142)
                      +++|+|+|||.+|+++|+++|.+++|+ ++.+|+.+++++|.|+ ++++.|+.+|+ ++||.+.+++
T Consensus         2 k~ef~V~M~C~~C~~~I~~aL~~~~gv-~v~v~~~~~~v~V~~~-~~~~~i~~~I~-~~Gy~a~lig   65 (66)
T d1fe0a_           2 KHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESE-HSMDTLLATLK-KTGKTVSYLG   65 (66)
T ss_dssp             EEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEES-SCHHHHHHHHH-TTTSCEEEEE
T ss_pred             CEEEEEccCchHHHHHHHHHHhcCCCc-EEEEEcCCCEEEEEee-CCHHHHHHHHH-HhCCeEEEee
Confidence            578999999999999999999999998 6999999999999998 99999999999 8999999985

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.68  E-value=6.7e-17  Score=105.47  Aligned_cols=67  Identities=22%  Similarity=0.476  Sum_probs=63.2

Q ss_pred             CceEEEEEeccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEEEcC
Q 032393           28 TPEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELIS   96 (142)
Q Consensus        28 ~~~i~lkV~M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~aelis   96 (142)
                      ...++|.|+|+|.+|+++|+++|.+++||.++.+|+.+++++|.|. ++++.|+++|+ ++||+|.+.+
T Consensus         5 ~~~~~f~V~M~C~~C~~~Iek~l~~~~gV~~v~vdl~~~~v~V~~~-~~~~~i~~~I~-~~G~~A~l~g   71 (72)
T d1qupa2           5 TYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS-VAPSTIINTLR-NCGKDAIIRG   71 (72)
T ss_dssp             CEEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES-SCHHHHHHHHH-HTTCCCEEEC
T ss_pred             cEEEEEEEccCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEee-CCHHHHHHHHH-HhCCCEEEec
Confidence            3467899999999999999999999999999999999999999998 99999999999 8999998865

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.67  E-value=1.3e-16  Score=104.17  Aligned_cols=65  Identities=23%  Similarity=0.343  Sum_probs=61.3

Q ss_pred             CCceEEEEEeccchhHHHHHHHHhhCC-CCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEE
Q 032393           27 ETPEIVLKVDMHCEACARKVARALKGF-EGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVE   93 (142)
Q Consensus        27 ~~~~i~lkV~M~C~~Ca~kIekaL~~i-~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~ae   93 (142)
                      .+.++.|+|+|||.+|+++|+++|.++ +||.++.+|+.+++++|.|+ ++++.|+.+|+ ++||.+.
T Consensus         2 ~~kt~~f~V~MtC~~C~~~Ie~~L~~l~~gV~~v~v~~~~~~v~V~~~-~~~~~i~~~i~-~~G~~~~   67 (72)
T d1cc8a_           2 EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTT-LPYDFILEKIK-KTGKEVR   67 (72)
T ss_dssp             CCEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEES-SCHHHHHHHHH-TTSSCEE
T ss_pred             CcEEEEEEECcCcHHHHHHHHHHHHcCcCceEEEEEECCCCEEEEeec-CCHHHHHHHHH-HHCCccC
Confidence            367889999999999999999999999 59999999999999999998 99999999999 8999886

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.56  E-value=3.2e-15  Score=96.98  Aligned_cols=67  Identities=21%  Similarity=0.411  Sum_probs=61.4

Q ss_pred             ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc-CCCHHHHHHHHHhccCCcEEEcC
Q 032393           29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK-TADPIKVCERLQKKSGRKVELIS   96 (142)
Q Consensus        29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~-~vd~~~I~~~I~kk~G~~aelis   96 (142)
                      .+++|.|+ |+|.+|+.+|+++|.+++||.++.+|+.+++++|.++ .++++.|..+|. .+||.+.++.
T Consensus         2 k~v~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~~~~~~i~~~i~-~~Gy~a~~~~   70 (72)
T d2ggpb1           2 REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIE-DCGFDCEILR   70 (72)
T ss_dssp             EEEEEECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSSCCHHHHHHHHH-HTTCCCEEEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCHHHHHHHHH-HhCCCeEEcc
Confidence            36889996 9999999999999999999999999999999999854 489999999999 8999998875

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

Probab=99.55  E-value=1.1e-14  Score=93.54  Aligned_cols=63  Identities=25%  Similarity=0.538  Sum_probs=58.3

Q ss_pred             EEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEc
Q 032393           32 VLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELI   95 (142)
Q Consensus        32 ~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aeli   95 (142)
                      .|.|+ |+|.+|+.+|+++|.+++||.++.+|+.+++++|.++  .+++..|..+|. .+||.+.++
T Consensus         3 el~V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~~~~~~i~~~i~-~~Gy~a~vi   68 (68)
T d1cpza_           3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAIN-ELGYQAEVI   68 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-TTSSCEEEC
T ss_pred             EEEECCeEcHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHH-hhCCCcEEC
Confidence            58995 9999999999999999999999999999999999853  479999999999 899999875

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

Probab=99.54  E-value=8.5e-15  Score=94.96  Aligned_cols=67  Identities=24%  Similarity=0.379  Sum_probs=61.1

Q ss_pred             CceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEc
Q 032393           28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELI   95 (142)
Q Consensus        28 ~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aeli   95 (142)
                      .++++|.|+ |+|.+|+.+|+++|++++||.++.+|+.+++++|+++  .++++.|.++|. .+||.+.+.
T Consensus         2 tqt~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~a~v~   71 (72)
T d1osda_           2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATA-DAGYPSSVK   71 (72)
T ss_dssp             EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHH-HTTCCCEEC
T ss_pred             CeEEEEEECCcccHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHH-hcCCCeEeC
Confidence            457899996 9999999999999999999999999999999999753  478999999999 899999864

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

Probab=99.54  E-value=2.2e-15  Score=95.79  Aligned_cols=62  Identities=26%  Similarity=0.457  Sum_probs=58.5

Q ss_pred             eEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEE
Q 032393           30 EIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVE   93 (142)
Q Consensus        30 ~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~ae   93 (142)
                      +++|.|+ |+|.+|+.+|+++|.+++||.++.+|+.+++++|.++ ++++.|..+|. .+||.++
T Consensus         2 t~~l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~~-~~~~~i~~~i~-~~GY~ve   64 (64)
T d1sb6a_           2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSA-LGEEQLRTAIA-SAGHEVE   64 (64)
T ss_dssp             EEEEECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEESS-SCHHHHHHHHH-HHCCCCC
T ss_pred             eEEEEECCccchhHHHHHHHHHhcCCCeeEEEccCCCCEEEEccC-CCHHHHHHHHH-HcCCCCC
Confidence            5789995 9999999999999999999999999999999999998 99999999999 8999863

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

Probab=99.53  E-value=2.3e-14  Score=92.05  Aligned_cols=64  Identities=22%  Similarity=0.449  Sum_probs=58.7

Q ss_pred             CceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcE
Q 032393           28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKV   92 (142)
Q Consensus        28 ~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~a   92 (142)
                      +.+++|.|+ |+|.+|+.+|+++|++++||.++.+|+.+++++|.++  .++.+.|...|. .+||.+
T Consensus         1 M~~~tl~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~-~~Gy~~   67 (69)
T d2qifa1           1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIE-DQGYDV   67 (69)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HTTCEE
T ss_pred             CcEEEEEECCccCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHH-HhCCcc
Confidence            457889996 9999999999999999999999999999999999864  479999999999 899976

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=2.2e-14  Score=92.78  Aligned_cols=66  Identities=21%  Similarity=0.378  Sum_probs=60.3

Q ss_pred             ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEc
Q 032393           29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELI   95 (142)
Q Consensus        29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aeli   95 (142)
                      +.++|+|+ |+|.+|+++|+++|.+++||.++.+|+.+++++|.++  .+++..|..+|. .+||.+.+.
T Consensus         3 ~~~~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~-~~Gy~a~l~   71 (72)
T d2aw0a_           3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE-DMGFDATLS   71 (72)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTSEEEEC
T ss_pred             EEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHH-hhCCCcEeC
Confidence            46789996 9999999999999999999999999999999999753  479999999999 899999764

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=2.8e-14  Score=93.97  Aligned_cols=70  Identities=16%  Similarity=0.372  Sum_probs=64.1

Q ss_pred             CCceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEcCC
Q 032393           27 ETPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELISP   97 (142)
Q Consensus        27 ~~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aelis~   97 (142)
                      .+.++.|.|+ |+|.+|+++|+++|+.++||.++.+|+.+++++|.++  .+++..|..+|+ .+||.+.+.++
T Consensus         6 ~~~~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~-~~GY~~~~~~~   78 (79)
T d1kvja_           6 GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID-DMGFDAVIHNP   78 (79)
T ss_dssp             TCEEEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCEEEECSC
T ss_pred             CceEEEEEECCeecHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHH-hcCCCcEeCCC
Confidence            4677899996 9999999999999999999999999999999999853  479999999999 89999998775

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.48  E-value=5.9e-14  Score=92.37  Aligned_cols=70  Identities=24%  Similarity=0.405  Sum_probs=62.8

Q ss_pred             ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEcCCCC
Q 032393           29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELISPLP   99 (142)
Q Consensus        29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aelis~~p   99 (142)
                      .++.|.|+ |+|.+|+.+|+++|..++||.++.+|+.+++++|+++  .+++..|..+|. .+||.+.+++...
T Consensus         2 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~~~   74 (79)
T d1p6ta2           2 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD-KLGYKLKLKGEQD   74 (79)
T ss_dssp             EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCCEEESCSSS
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEEeCCCEEEEEECCCCCCHHHHHHHHH-HHCCceEECCccc
Confidence            46789996 9999999999999999999999999999999999853  479999999999 8999999876543

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.48  E-value=5.8e-14  Score=91.14  Aligned_cols=66  Identities=32%  Similarity=0.454  Sum_probs=59.5

Q ss_pred             CceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEEE
Q 032393           28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVEL   94 (142)
Q Consensus        28 ~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~ael   94 (142)
                      .++++|.|+ |+|.+|+.+|+++|.+++||.++.||+.+++++|.++..+.+.|..+|. .+||.+..
T Consensus         2 g~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~i~~~i~-~~GY~v~~   68 (73)
T d1mwza_           2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQ-KAGYSLRD   68 (73)
T ss_dssp             CCCEEEECTTCCSHHHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHH-HHTCCCCB
T ss_pred             CCEEEEEECCcCCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCHHHHHHHHH-HcCCcccC
Confidence            467899996 9999999999999999999999999999999999876456789999999 89997653

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=6.3e-14  Score=93.47  Aligned_cols=70  Identities=13%  Similarity=0.265  Sum_probs=62.8

Q ss_pred             CCceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEcCC
Q 032393           27 ETPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELISP   97 (142)
Q Consensus        27 ~~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aelis~   97 (142)
                      ....+.|.|+ |+|.+|+++|+++|.+++||.++.+|+.+++++|.++  .+++..|..+|. .+||.+.+.+.
T Consensus         7 ~~~~v~l~V~GMtC~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~~~~~~~i~~~I~-~~Gy~a~~~~~   79 (84)
T d1q8la_           7 GEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIE-AMGFPAFVKKQ   79 (84)
T ss_dssp             SCEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHH-HTTCCEECSCC
T ss_pred             CCEEEEEEECCeEcHHHHHHHHHHHhcCCCceEEEEECCCCEEceeecccccCHHHHHHHHH-HhCCccEEcCC
Confidence            3456789996 9999999999999999999999999999999999854  478999999999 89999987763

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.45  E-value=1.3e-13  Score=89.05  Aligned_cols=65  Identities=31%  Similarity=0.521  Sum_probs=58.8

Q ss_pred             CCceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcE
Q 032393           27 ETPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKV   92 (142)
Q Consensus        27 ~~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~a   92 (142)
                      ...+++|.|+ |+|.+|+.+|+++|.+++||.++.+|+.+++++|+++  .++...|.++|+ .+||.+
T Consensus         4 ~~~~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~~~~~~i~~~i~-~~Gy~v   71 (72)
T d1p6ta1           4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE-KLGYHV   71 (72)
T ss_dssp             CCEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHH-HHTCEE
T ss_pred             CceEEEEEECCeecHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHH-HhCCcc
Confidence            3457899996 9999999999999999999999999999999999743  478999999999 899975

>d3bpda1 d.58.61.1 (A:1-91) Uncharacterized protein AF1549 {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: MTH889-like
family: MTH889-like
domain: Uncharacterized protein AF1549
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.10  E-value=0.26  Score=31.89  Aligned_cols=67  Identities=18%  Similarity=0.224  Sum_probs=48.9

Q ss_pred             CCceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEec-----CCCE--EEEeccCCCHHHHHHHHHhccCCcEEEc
Q 032393           27 ETPEIVLKVD-MHCEACARKVARALKGFEGVDDITADS-----KASK--VVVKGKTADPIKVCERLQKKSGRKVELI   95 (142)
Q Consensus        27 ~~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~-----~~~k--VtV~g~~vd~~~I~~~I~kk~G~~aeli   95 (142)
                      ...+++|.|. -|-+.-. .+-..|+.++||..|.+..     .+..  ++|.|..+|...|..+|. .+|-.++-+
T Consensus         3 ~irRlVLDVlKPh~p~~~-~~A~~l~~~~gV~~VnitV~EiD~~t~~i~ItiEG~~idyd~i~~~IE-~~Gg~IHSI   77 (91)
T d3bpda1           3 GLRRLVLDVLKPHEPKTI-VFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIE-DMGGVIHSV   77 (91)
T ss_dssp             SEEEEEEEEEEESCSCHH-HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHH-TTTCEEEEE
T ss_pred             ceeEEEEEeecCCCCCHH-HHHHHHhccCCcceEEEEEEEecccceEEEEEEEecCCCHHHHHHHHH-HcCCeEEEE
Confidence            4567888884 5555444 4888899999988776544     4443  345686699999999999 899877654

>d2raqa1 d.58.61.1 (A:3-95) Uncharacterized protein MTH889 {Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: MTH889-like
family: MTH889-like
domain: Uncharacterized protein MTH889
species: Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=89.67  E-value=0.64  Score=30.08  Aligned_cols=66  Identities=17%  Similarity=0.291  Sum_probs=48.0

Q ss_pred             CceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEec-----CCCEE--EEeccCCCHHHHHHHHHhccCCcEEEc
Q 032393           28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADS-----KASKV--VVKGKTADPIKVCERLQKKSGRKVELI   95 (142)
Q Consensus        28 ~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~-----~~~kV--tV~g~~vd~~~I~~~I~kk~G~~aeli   95 (142)
                      ..+++|.|. -|-+ -.-.+-..|+.++||..|.+..     .+..+  +|.|..+|...|..+|. .+|-.++-+
T Consensus         4 iRRlVLDVlKPh~P-~i~e~A~~l~~~~gV~~VnitV~EiD~et~~i~itiEG~~idyd~i~~~IE-~~Gg~IHSI   77 (93)
T d2raqa1           4 LIRIVLDILKPHEP-IIPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIE-SYGGSIHSV   77 (93)
T ss_dssp             EEEEEEEEECCSCS-CHHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHH-HTTCEEEEE
T ss_pred             eEEEEEEeecCCCC-CHHHHHHHHhccCCcceEEEEEEEecccceEEEEEEEecCCCHHHHHHHHH-HcCCeEEEE
Confidence            356778884 4555 4557778899999987776543     44444  45687799999999999 899877654

>d1uwda_ d.52.8.2 (A:) Hypothetical protein TM0487 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: Fe-S cluster assembly (FSCA) domain-like
family: PaaD-like
domain: Hypothetical protein TM0487
species: Thermotoga maritima [TaxId: 2336]

Probab=82.04  E-value=0.67  Score=30.04  Aligned_cols=36  Identities=19%  Similarity=0.416  Sum_probs=25.4

Q ss_pred             eEEEEEeccchhH------HHHHHHHhhCCCCccEEEEecCC
Q 032393           30 EIVLKVDMHCEAC------ARKVARALKGFEGVDDITADSKA   65 (142)
Q Consensus        30 ~i~lkV~M~C~~C------a~kIekaL~~i~GV~~V~vd~~~   65 (142)
                      .+.+.+.+++.+|      ...|+.+|.+++||.+|.|++.-
T Consensus        42 ~V~v~~~lt~~~Cp~~~~i~~~i~~al~~~~gV~~v~V~i~~   83 (102)
T d1uwda_          42 NVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELTF   83 (102)
T ss_dssp             EEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEECC
T ss_pred             ceEEEEecCCCCCchHHHHHHHHHHHHHcCCCCceEEEEEEe
Confidence            3445554454444      45788899999999999987743