Citrus Sinensis ID: 032406


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-
MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPTTGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKVIYELYTDYVLKNPFYEMEMPIRCELFDINLSQAVQKDRVAMLGR
cccEEEEEEEEccccEEEccccccccccccccHHHHHHHHHHHHHHHHHccccccccccEEEEEccEEEEEEEcccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHcccccccccCCcHHHHHHHHHHHHHcccccccc
MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPTTGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKVIYELYTDYVLKNPFYEMEMPIRCELFDINLSQAVQKDRVAM***
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MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPTTGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKVIYELYTDYVLKNPFYEMEMPIRCELFDINLSQAVQKDRVAMLGR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Trafficking protein particle complex subunit 4 May play a role in vesicular transport from endoplasmic reticulum to Golgi.probableQ54UU1
Transport protein particle subunit trs23 TRAPP plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.probableO43041

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2J3T, chain D
Confidence level:very confident
Coverage over the Query: 32-136
View the alignment between query and template
View the model in PyMOL
Template: 3CUE, chain A
Confidence level:very confident
Coverage over the Query: 3-135
View the alignment between query and template
View the model in PyMOL