Citrus Sinensis ID: 032482

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Protein Sequence
MVSFEMNDRKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISFGVGFFFVVIGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDRYRSRRVPV
Secondary Structure (PSIPRED)
ccEEEEccccEEEHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccccccHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEccHHHHHHHccHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccEcHHHccHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
mvsfemndrkkiglgltgfgiFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRqnykgtisfGVGFFFVVIGWPILGMILETYGFIVLFSGFWPTLSVFLQripilgwlfqqpfvrsffdryrsrrvpv
Flexible Loop (DISEMBL)
MVSFEMNDRKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISFGVGFFFVVIGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFvrsffdryrsrrvpv
Low Complexity Region (SEG)
MVSFEMNDRKKiglgltgfgifftflgiifffDKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISfgvgfffvvigWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDRYRSRRVPV
Disordered region (IsUnstruct)
**********KIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISFGVGFFFVVIGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDRY*******
Disordered Region (DISOPRED)
*******DRKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISFGVGFFFVVIGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDRYRSRRV**
Disordered Region (DISEMBL)
********RKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISFGVGFFFVVIGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDRYRSRRVPV
Disordered Region (DISPRO)
**SFEMNDRKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISFGVGFFFVVIGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDRYRSRRV**
Transmembrane Helix (TMHMM)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVSFEMNDRKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISFGVGFFFVVIGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDRYRSRRVPV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	140	2.2.26 [Sep-21-2011]
Q20263	141	Probable Golgi transport	yes	no	1.0	0.992	0.439	1e-24
Q9DCQ3	133	Vesicle transport protein	yes	no	0.85	0.894	0.5	2e-23
Q2NKV8	132	Vesicle transport protein	yes	no	0.85	0.901	0.5	3e-23
Q9CR60	138	Vesicle transport protein	no	no	0.914	0.927	0.531	1e-22
Q9Y3E0	138	Vesicle transport protein	yes	no	0.914	0.927	0.523	3e-22
Q2YDE3	138	Vesicle transport protein	no	no	0.914	0.927	0.523	3e-22
Q6ZVE7	132	Vesicle transport protein	no	no	0.85	0.901	0.491	8e-22
Q54CL4	138	Protein transport protein	yes	no	0.921	0.934	0.376	3e-16
Q03554	138	Protein transport protein	yes	no	0.757	0.768	0.386	1e-13
Q9USJ2	129	Protein transport protein	yes	no	0.807	0.875	0.362	2e-10

>sp|Q20263|GOT1_CAEEL Probable Golgi transport protein 1 OS=Caenorhabditis elegans GN=F41C3.4 PE=3 SV=2

 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 62/141 (43%), Positives = 90/141 (63%), Gaps = 1/141 (0%)

Query: 1   MVSFEMNDRKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQF 60
           M++FE++  K+IG+GLT FG FF FLG++ F D  LLA+GN+LFI G++  IG++ T+ F
Sbjct: 1   MMNFEVSTTKQIGVGLTTFGFFFIFLGVLMFLDSALLAIGNLLFIVGITFIIGVQRTLVF 60

Query: 61  FMKRQNYKGTISFGVGFFFVVIGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWL 120
           F + +  KG+I F  G   V+ G+P+ GMI E +GFIVLF GF P +   L+ IP +  +
Sbjct: 61  FFEFRKLKGSILFFGGILVVLFGYPLFGMIAECWGFIVLFGGFLPGIVNLLRSIPGISTI 120

Query: 121 FQQPFVRSFFDRYRSR-RVPV 140
              P +R   DR     + PV
Sbjct: 121 TYLPGIRQVLDRLAPESKYPV 141

May be involved in fusion of ER-derived transport vesicles with the Golgi complex.
Caenorhabditis elegans (taxid: 6239)

>sp|Q9DCQ3|GOT1A_MOUSE Vesicle transport protein GOT1A OS=Mus musculus GN=Golt1a PE=2 SV=1

 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/122 (50%), Positives = 81/122 (66%), Gaps = 3/122 (2%)

Query: 5   EMNDRKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQFFMKR 64
            + + +KIG+G+TGFG+FF   GI+ +FD  LLA GN+LF+ G+SL IGL+ T  FF +R
Sbjct: 3   SITEWQKIGVGITGFGVFFILFGILLYFDSVLLAFGNLLFLTGLSLIIGLRRTFAFFFQR 62

Query: 65  QNYKGTISFGVGFFFVVIGWPILGMILETYGFIVLFSGFWPTLSVFLQ---RIPILGWLF 121
              KGT  F  G   V++ WP+LGM+LE YGFI LF GF+P +  FL     IP L  LF
Sbjct: 63  HKLKGTSFFLGGVAIVLLRWPLLGMLLEAYGFISLFKGFFPVVFGFLGSAFNIPFLSTLF 122

Query: 122 QQ 123
           Q+
Sbjct: 123 QK 124

May be involved in fusion of ER-derived transport vesicles with the Golgi complex.

Mus musculus (taxid: 10090)

>sp|Q2NKV8|GOT1A_BOVIN Vesicle transport protein GOT1A OS=Bos taurus GN=GOLT1A PE=2 SV=1

 Score =  107 bits (266), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 61/122 (50%), Positives = 79/122 (64%), Gaps = 3/122 (2%)

Query: 5   EMNDRKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQFFMKR 64
            + + +KIG+G TGFGIFF   G++ +FD  LLA GN+LF+ G+SL IGL+ T  FF +R
Sbjct: 3   SITEWQKIGVGTTGFGIFFILFGMLLYFDSVLLAFGNLLFLTGLSLIIGLRRTFSFFFQR 62

Query: 65  QNYKGTISFGVGFFFVVIGWPILGMILETYGFIVLFSGFWPTLSVFL---QRIPILGWLF 121
             +KGT  F  G   V++ WP+LGM LETYGF  LF GF+P    FL     IP L  LF
Sbjct: 63  HKFKGTSFFLGGVVIVLLRWPLLGMCLETYGFFSLFRGFFPVAFGFLGSASNIPFLSALF 122

Query: 122 QQ 123
           Q+
Sbjct: 123 QR 124

May be involved in fusion of ER-derived transport vesicles with the Golgi complex.

Bos taurus (taxid: 9913)

>sp|Q9CR60|GOT1B_MOUSE Vesicle transport protein GOT1B OS=Mus musculus GN=Golt1b PE=2 SV=1

 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/128 (53%), Positives = 93/128 (72%)

Query: 5   EMNDRKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQFFMKR 64
            + D +KIG+GLTGFG+FF F G+I FFDK LLA+GN+LF+AG++  IGL+ T +FF +R
Sbjct: 3   SLTDTQKIGMGLTGFGVFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQR 62

Query: 65  QNYKGTISFGVGFFFVVIGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQP 124
              K T  F  G F V+IGWP++GMI E YGF +LF GF+P +  F++R+P+LG L   P
Sbjct: 63  HKVKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLP 122

Query: 125 FVRSFFDR 132
            +RSF D+
Sbjct: 123 GIRSFVDK 130

May be involved in fusion of ER-derived transport vesicles with the Golgi complex.

Mus musculus (taxid: 10090)

>sp|Q9Y3E0|GOT1B_HUMAN Vesicle transport protein GOT1B OS=Homo sapiens GN=GOLT1B PE=1 SV=1

 Score =  103 bits (257), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/128 (52%), Positives = 93/128 (72%)

Query: 5   EMNDRKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQFFMKR 64
            + D +KIG+GLTGFG+FF F G+I FFDK LLA+GN+LF+AG++  IGL+ T +FF ++
Sbjct: 3   SLTDTQKIGMGLTGFGVFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQK 62

Query: 65  QNYKGTISFGVGFFFVVIGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQP 124
              K T  F  G F V+IGWP++GMI E YGF +LF GF+P +  F++R+P+LG L   P
Sbjct: 63  HKMKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLP 122

Query: 125 FVRSFFDR 132
            +RSF D+
Sbjct: 123 GIRSFVDK 130

May be involved in fusion of ER-derived transport vesicles with the Golgi complex.

Homo sapiens (taxid: 9606)

>sp|Q2YDE3|GOT1B_BOVIN Vesicle transport protein GOT1B OS=Bos taurus GN=GOLT1B PE=2 SV=1

 Score =  103 bits (257), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/128 (52%), Positives = 93/128 (72%)

Query: 5   EMNDRKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQFFMKR 64
            + D +KIG+GLTGFG+FF F G+I FFDK LLA+GN+LF+AG++  IGL+ T +FF ++
Sbjct: 3   SLTDTQKIGMGLTGFGVFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQK 62

Query: 65  QNYKGTISFGVGFFFVVIGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQP 124
              K T  F  G F V+IGWP++GMI E YGF +LF GF+P +  F++R+P+LG L   P
Sbjct: 63  HKMKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLP 122

Query: 125 FVRSFFDR 132
            +RSF D+
Sbjct: 123 GIRSFVDK 130

May be involved in fusion of ER-derived transport vesicles with the Golgi complex.

Bos taurus (taxid: 9913)

>sp|Q6ZVE7|GOT1A_HUMAN Vesicle transport protein GOT1A OS=Homo sapiens GN=GOLT1A PE=2 SV=1

 Score =  102 bits (253), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 60/122 (49%), Positives = 78/122 (63%), Gaps = 3/122 (2%)

Query: 5   EMNDRKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQFFMKR 64
            + + +KIG+G+TGFGIFF   G + +FD  LLA GN+LF+ G+SL IGL+ T  FF +R
Sbjct: 3   SITEWQKIGVGITGFGIFFILFGTLLYFDSVLLAFGNLLFLTGLSLIIGLRKTFWFFFQR 62

Query: 65  QNYKGTISFGVGFFFVVIGWPILGMILETYGFIVLFSGFWPTLSVFL---QRIPILGWLF 121
              KGT     G   V++ WP+LGM LETYGF  LF GF+P    FL     IP LG LF
Sbjct: 63  HKLKGTSFLLGGVVIVLLRWPLLGMFLETYGFFSLFKGFFPVAFGFLGNVCNIPFLGALF 122

Query: 122 QQ 123
           ++
Sbjct: 123 RR 124

May be involved in fusion of ER-derived transport vesicles with the Golgi complex.

Homo sapiens (taxid: 9606)

>sp|Q54CL4|GOT1_DICDI Protein transport protein got1 homolog OS=Dictyostelium discoideum GN=golt1 PE=3 SV=1

 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 81/130 (62%), Gaps = 1/130 (0%)

Query: 7   NDRKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQN 66
            D++KIG  L+  G+FF FLG++ F D+ LLA+GN+L ++G+ L +GL+ T +FF +++ 
Sbjct: 3   TDQQKIGAMLSAMGLFFGFLGVLLFLDRNLLALGNLLLVSGIVLILGLQKTTKFFAQKKK 62

Query: 67  YKGTISFGVGF-FFVVIGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPF 125
            KGTI F  G    +V  W  +GM++E +GF+ LF   +P +   L+++PI+G +   P 
Sbjct: 63  IKGTILFFFGIVVLLVTRWTFVGMVIEIFGFVNLFGDAFPIVISILRKLPIIGNILNHPL 122

Query: 126 VRSFFDRYRS 135
           V     +  S
Sbjct: 123 VNRLLQKADS 132

May be involved in fusion of ER-derived transport vesicles with the Golgi complex.

Dictyostelium discoideum (taxid: 44689)

>sp|Q03554|GOT1_YEAST Protein transport protein GOT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GOT1 PE=1 SV=1

 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/106 (38%), Positives = 62/106 (58%)

Query: 33  DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISFGVGFFFVVIGWPILGMILE 92
           D+ LLA+GNILF+ GV L IG + T  FF +    +G++ F VG F +++ W  LG I+E
Sbjct: 30  DRALLALGNILFLIGVFLIIGSQKTYIFFTRPNKRRGSLFFLVGAFLILLKWTFLGFIIE 89

Query: 93  TYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDRYRSRRV 138
           + G I LF  F+  +  FL+ +PI+G +   P +    D+    RV
Sbjct: 90  SLGIIGLFGDFFGVIVQFLRSMPIIGPILSHPAIAPIVDKLAGVRV 135

Nonessential protein required for the fusion of ER-derived transport vesicles with the Golgi complex. Can be replaced by SFT2.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q9USJ2|GOT1_SCHPO Protein transport protein got1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=got1 PE=3 SV=1

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 66/113 (58%)

Query: 6   MNDRKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQ 65
           ++D +KIG+G T  G  F  +GI  FFD  LL++GN+L + G  +  G   ++ FF+++ 
Sbjct: 3   LSDLQKIGVGTTALGFLFMIMGIFMFFDGPLLSLGNLLLVFGFFMIAGFSKSVSFFLRKD 62

Query: 66  NYKGTISFGVGFFFVVIGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILG 118
              G+ISF  G    +  +PI+G  +E  GF  LF  F+P +  FL+ +P +G
Sbjct: 63  RMLGSISFFSGLLLTLFHFPIIGFFVECLGFFNLFKVFYPLIISFLRTVPYIG 115

Nonessential protein required for the fusion of ER-derived transport vesicles with the Golgi complex. Can be replaced by sft2.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	140
224093186	140	predicted protein [Populus trichocarpa]	1.0	1.0	0.892	1e-64
449468772	140	PREDICTED: vesicle transport protein GOT	1.0	1.0	0.871	2e-64
224133042	140	predicted protein [Populus trichocarpa]	1.0	1.0	0.878	6e-64
225427328	140	PREDICTED: vesicle transport protein GOT	1.0	1.0	0.871	6e-64
351721218	147	uncharacterized protein LOC100500127 [Gl	1.0	0.952	0.857	1e-63
297806069	140	hypothetical protein ARALYDRAFT_486933 [	1.0	1.0	0.857	3e-63
356521687	140	PREDICTED: vesicle transport protein GOT	1.0	1.0	0.85	3e-63
15229139	140	Got1/Sft2-like vescicle transport-like p	1.0	1.0	0.85	4e-63
351720678	140	uncharacterized protein LOC100527869 [Gl	1.0	1.0	0.842	9e-63
357493923	140	Vesicle transport protein GOT1B [Medicag	1.0	1.0	0.828	2e-62

>gi|224093186|ref|XP_002309824.1| predicted protein [Populus trichocarpa] gi|222852727|gb|EEE90274.1| predicted protein [Populus trichocarpa]

 Score =  250 bits (639), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 125/140 (89%), Positives = 135/140 (96%)

Query: 1   MVSFEMNDRKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQF 60
           MVSFEMNDRKKIGLGLTGFGIFF+FLGI+FFFDKGLLAMGNILFI+GVSLTIG KSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFISGVSLTIGPKSTMQF 60

Query: 61  FMKRQNYKGTISFGVGFFFVVIGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWL 120
           FMKRQN+KGTISFG GFFFVVIGWP++GMILE YGFIVLFSGFWPTL+VF+QRIPI GW+
Sbjct: 61  FMKRQNFKGTISFGAGFFFVVIGWPVIGMILEAYGFIVLFSGFWPTLAVFVQRIPIFGWV 120

Query: 121 FQQPFVRSFFDRYRSRRVPV 140
           FQQPFVRSFFDRYR +RVPV
Sbjct: 121 FQQPFVRSFFDRYRGKRVPV 140

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449468772|ref|XP_004152095.1| PREDICTED: vesicle transport protein GOT1B-like [Cucumis sativus] gi|449502276|ref|XP_004161596.1| PREDICTED: vesicle transport protein GOT1B-like [Cucumis sativus]

 Score =  249 bits (637), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 122/140 (87%), Positives = 136/140 (97%)

Query: 1   MVSFEMNDRKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQF 60
           MVSFEMNDRKKIGLGLTGFG+FF+FLGI+FFFDKGLLAMGNILF +GV+LTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 61  FMKRQNYKGTISFGVGFFFVVIGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWL 120
           FMKRQN+KGTISFG+GFFFV+IGWPI GMILE YGF+VLFSGFWPTL+VFLQ+IP+LGWL
Sbjct: 61  FMKRQNFKGTISFGLGFFFVIIGWPIFGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 121 FQQPFVRSFFDRYRSRRVPV 140
           FQQP+VRSFFD+YR RRVPV
Sbjct: 121 FQQPYVRSFFDKYRGRRVPV 140

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133042|ref|XP_002327947.1| predicted protein [Populus trichocarpa] gi|222837356|gb|EEE75735.1| predicted protein [Populus trichocarpa]

 Score =  248 bits (633), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 123/140 (87%), Positives = 135/140 (96%)

Query: 1   MVSFEMNDRKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQF 60
           MVSFE+NDRKKIGLGLTGFGIFF+FLGI+FFFDKG LAMGNILFI+GVSLTIG KSTMQF
Sbjct: 1   MVSFELNDRKKIGLGLTGFGIFFSFLGIVFFFDKGFLAMGNILFISGVSLTIGPKSTMQF 60

Query: 61  FMKRQNYKGTISFGVGFFFVVIGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWL 120
           FMKRQN+KGTISFG GFFFVVIGWP++GMILE YGFIVLFSGFWPTL+VF+Q+IPILGW+
Sbjct: 61  FMKRQNFKGTISFGAGFFFVVIGWPVIGMILEAYGFIVLFSGFWPTLAVFIQKIPILGWV 120

Query: 121 FQQPFVRSFFDRYRSRRVPV 140
           FQQPFVRSFFDRYR +RVPV
Sbjct: 121 FQQPFVRSFFDRYRGKRVPV 140

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427328|ref|XP_002282266.1| PREDICTED: vesicle transport protein GOT1A [Vitis vinifera] gi|297742166|emb|CBI33953.3| unnamed protein product [Vitis vinifera]

 Score =  248 bits (633), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 122/140 (87%), Positives = 135/140 (96%)

Query: 1   MVSFEMNDRKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQF 60
           MVSFEMNDRKKIGLGLT FG+FF+FLGI+F FDKGLLAMGNILFI+GV+LTIGLKST+QF
Sbjct: 1   MVSFEMNDRKKIGLGLTAFGVFFSFLGIVFLFDKGLLAMGNILFISGVTLTIGLKSTVQF 60

Query: 61  FMKRQNYKGTISFGVGFFFVVIGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWL 120
           FMKRQNYKGTISFGVGFFFV+IGWPILGM+LE YGFIVLFSGFWPTL+VFLQ+IP LGW+
Sbjct: 61  FMKRQNYKGTISFGVGFFFVIIGWPILGMMLEAYGFIVLFSGFWPTLAVFLQKIPFLGWV 120

Query: 121 FQQPFVRSFFDRYRSRRVPV 140
           FQQPFVRSFFD+YR +RVPV
Sbjct: 121 FQQPFVRSFFDKYRGKRVPV 140

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721218|ref|NP_001237202.1| uncharacterized protein LOC100500127 [Glycine max] gi|255629390|gb|ACU15040.1| unknown [Glycine max]

 Score =  247 bits (631), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 120/140 (85%), Positives = 135/140 (96%)

Query: 1   MVSFEMNDRKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQF 60
           MVSFEMNDRKKIGLGLTGFGIFF+FLG+IFFFDKGLLAMGN+LF++GVSLTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGLIFFFDKGLLAMGNVLFVSGVSLTIGLKSTMQF 60

Query: 61  FMKRQNYKGTISFGVGFFFVVIGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWL 120
           FMKR N+KGTISFG+GFF +++GWPILGMI+E+YGFIVLFSGFWPTL+VFLQ+IP+LGWL
Sbjct: 61  FMKRSNFKGTISFGIGFFILILGWPILGMIVESYGFIVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 121 FQQPFVRSFFDRYRSRRVPV 140
           FQQPFVRS  DRYR RRVPV
Sbjct: 121 FQQPFVRSLLDRYRGRRVPV 140

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297806069|ref|XP_002870918.1| hypothetical protein ARALYDRAFT_486933 [Arabidopsis lyrata subsp. lyrata] gi|297316755|gb|EFH47177.1| hypothetical protein ARALYDRAFT_486933 [Arabidopsis lyrata subsp. lyrata]

 Score =  246 bits (627), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 120/140 (85%), Positives = 134/140 (95%)

Query: 1   MVSFEMNDRKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQF 60
           M+SFEMNDRKKIGLGLTGFG+FF+FLGI+F FDKGLLAMGNILFI+GVSLTIG KSTMQF
Sbjct: 1   MMSFEMNDRKKIGLGLTGFGVFFSFLGIVFVFDKGLLAMGNILFISGVSLTIGFKSTMQF 60

Query: 61  FMKRQNYKGTISFGVGFFFVVIGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWL 120
           FMKRQNYKGTISFGVGFFFV+IGWPILGM+LETYGF VLFSGFWPTL+VF Q+IPILGW+
Sbjct: 61  FMKRQNYKGTISFGVGFFFVIIGWPILGMMLETYGFFVLFSGFWPTLAVFAQKIPILGWI 120

Query: 121 FQQPFVRSFFDRYRSRRVPV 140
            QQP++RSFFD+YR +RVPV
Sbjct: 121 IQQPYIRSFFDKYRGKRVPV 140

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521687|ref|XP_003529484.1| PREDICTED: vesicle transport protein GOT1A-like [Glycine max]

 Score =  246 bits (627), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 119/140 (85%), Positives = 135/140 (96%)

Query: 1   MVSFEMNDRKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQF 60
           MVSFEMNDRKKIGLGLTGFGIFF+FLG+IFFFDKGLLAMGNILF++GVSLTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGLIFFFDKGLLAMGNILFVSGVSLTIGLKSTMQF 60

Query: 61  FMKRQNYKGTISFGVGFFFVVIGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWL 120
           FMKR N+KGTISFG+GFF +++GWPILGMI+E+YGFI+LFSGFWPTL+VFLQ+IP+LGWL
Sbjct: 61  FMKRSNFKGTISFGIGFFILILGWPILGMIVESYGFIILFSGFWPTLAVFLQKIPVLGWL 120

Query: 121 FQQPFVRSFFDRYRSRRVPV 140
           FQQP+VRS  DRYR RRVPV
Sbjct: 121 FQQPYVRSLLDRYRGRRVPV 140

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15229139|ref|NP_190511.1| Got1/Sft2-like vescicle transport-like protein [Arabidopsis thaliana] gi|15240976|ref|NP_195763.1| Got1/Sft2-like vescicle transport protein [Arabidopsis thaliana] gi|334187355|ref|NP_001190200.1| Got1/Sft2-like vescicle transport protein [Arabidopsis thaliana] gi|6561943|emb|CAB62447.1| putative protein [Arabidopsis thaliana] gi|7320721|emb|CAB81926.1| putative protein [Arabidopsis thaliana] gi|15028037|gb|AAK76549.1| unknown protein [Arabidopsis thaliana] gi|17065530|gb|AAL32919.1| Unknown protein [Arabidopsis thaliana] gi|20258895|gb|AAM14141.1| unknown protein [Arabidopsis thaliana] gi|21537222|gb|AAM61563.1| unknown [Arabidopsis thaliana] gi|30102848|gb|AAP21342.1| At3g49420 [Arabidopsis thaliana] gi|332002959|gb|AED90342.1| Got1/Sft2-like vescicle transport protein [Arabidopsis thaliana] gi|332002960|gb|AED90343.1| Got1/Sft2-like vescicle transport protein [Arabidopsis thaliana] gi|332645019|gb|AEE78540.1| Got1/Sft2-like vescicle transport-like protein [Arabidopsis thaliana]

 Score =  245 bits (626), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 119/140 (85%), Positives = 134/140 (95%)

Query: 1   MVSFEMNDRKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQF 60
           M+SFEMNDRKKIGLGLTGFG+FF+FLGI+F FDKGLLAMGNILFI+GVSLTIG KSTMQF
Sbjct: 1   MMSFEMNDRKKIGLGLTGFGVFFSFLGIVFVFDKGLLAMGNILFISGVSLTIGFKSTMQF 60

Query: 61  FMKRQNYKGTISFGVGFFFVVIGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWL 120
           FMKRQNYKGTISFGVGFFFV+IGWPILGM+LETYGF VLFSGFWPTL+VF Q+IP+LGW+
Sbjct: 61  FMKRQNYKGTISFGVGFFFVIIGWPILGMMLETYGFFVLFSGFWPTLAVFAQKIPVLGWI 120

Query: 121 FQQPFVRSFFDRYRSRRVPV 140
            QQP++RSFFD+YR +RVPV
Sbjct: 121 IQQPYIRSFFDKYRGKRVPV 140

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351720678|ref|NP_001238720.1| uncharacterized protein LOC100527869 [Glycine max] gi|255633428|gb|ACU17072.1| unknown [Glycine max]

 Score =  244 bits (623), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 118/140 (84%), Positives = 135/140 (96%)

Query: 1   MVSFEMNDRKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQF 60
           MVSFEMNDRKKIGLGLTGFGIFF+FLGIIFFFDKGLLAMGN+LF++GVS+TIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIIFFFDKGLLAMGNVLFVSGVSITIGLKSTMQF 60

Query: 61  FMKRQNYKGTISFGVGFFFVVIGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWL 120
           FMKR N+KGTISFGVGFF +++GWPI+GMI+E YGF+VLFSGFWPTL+VFLQ+IP+LGWL
Sbjct: 61  FMKRSNFKGTISFGVGFFILIMGWPIVGMIVEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 121 FQQPFVRSFFDRYRSRRVPV 140
           FQQPFVRS FDRYR +R+PV
Sbjct: 121 FQQPFVRSLFDRYRGKRMPV 140

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357493923|ref|XP_003617250.1| Vesicle transport protein GOT1B [Medicago truncatula] gi|217070978|gb|ACJ83849.1| unknown [Medicago truncatula] gi|355518585|gb|AET00209.1| Vesicle transport protein GOT1B [Medicago truncatula] gi|388508756|gb|AFK42444.1| unknown [Medicago truncatula]

 Score =  243 bits (619), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 116/140 (82%), Positives = 134/140 (95%)

Query: 1   MVSFEMNDRKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQF 60
           M+SFEMNDRKKIGLGLTGFGIFF+FLGI+FFFDKGLLAMGN+LF++GVSLTIGLKSTMQF
Sbjct: 1   MLSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNVLFVSGVSLTIGLKSTMQF 60

Query: 61  FMKRQNYKGTISFGVGFFFVVIGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWL 120
           FMKR N+KGTISFG+GF  +++GWPILGMI+E YGFIVLFSGFWPTL+VFLQ+IP+LGW+
Sbjct: 61  FMKRSNFKGTISFGIGFLILILGWPILGMIIEAYGFIVLFSGFWPTLAVFLQKIPVLGWV 120

Query: 121 FQQPFVRSFFDRYRSRRVPV 140
            QQPF+RSFFDRYR +RVPV
Sbjct: 121 IQQPFIRSFFDRYRGKRVPV 140

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	140
TAIR|locus:2114638	140	AT3G49420 "AT3G49420" [Arabido	1.0	1.0	0.657	6.2e-46
TAIR|locus:2179167	140	AT5G01430 "AT5G01430" [Arabido	1.0	1.0	0.657	6.2e-46
TAIR|locus:2097745	140	AT3G03180 "AT3G03180" [Arabido	1.0	1.0	0.585	1.2e-40
FB|FBgn0052576	140	CG32576 [Drosophila melanogast	0.714	0.714	0.48	1.1e-21
MGI|MGI:1914214	138	Golt1b "golgi transport 1 homo	0.714	0.724	0.45	8e-21
UNIPROTKB|Q2YDE3	138	GOLT1B "Vesicle transport prot	0.714	0.724	0.44	1.7e-20
UNIPROTKB|E2QTG1	138	GOLT1B "Uncharacterized protei	0.714	0.724	0.44	1.7e-20
UNIPROTKB|Q9Y3E0	138	GOLT1B "Vesicle transport prot	0.714	0.724	0.44	1.7e-20
UNIPROTKB|F1SR02	138	GOLT1B "Uncharacterized protei	0.714	0.724	0.44	1.7e-20
RGD|1310691	138	Golt1b "golgi transport 1B" [R	0.714	0.724	0.44	1.7e-20

TAIR|locus:2114638 AT3G49420 "AT3G49420" [Arabidopsis thaliana (taxid:3702)]

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 92/140 (65%), Positives = 103/140 (73%)

Query:     1 MVSFEMNDRKKXXXXXXXXXXXXXXXXXXXXXDKGLLAMGNILFIAGVSLTIGLKSTMQF 60
             M+SFEMNDRKK                     DKGLLAMGNILFI+GVSLTIG KSTMQF
Sbjct:     1 MMSFEMNDRKKIGLGLTGFGVFFSFLGIVFVFDKGLLAMGNILFISGVSLTIGFKSTMQF 60

Query:    61 FMKRQNYKGTISXXXXXXXXXXXWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWL 120
             FMKRQNYKGTIS           WPILGM+LETYGF VLFSGFWPTL+VF Q+IP+LGW+
Sbjct:    61 FMKRQNYKGTISFGVGFFFVIIGWPILGMMLETYGFFVLFSGFWPTLAVFAQKIPVLGWI 120

Query:   121 FQQPFVRSFFDRYRSRRVPV 140
              QQP++RSFFD+YR +RVPV
Sbjct:   121 IQQPYIRSFFDKYRGKRVPV 140

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0016192 "vesicle-mediated transport" evidence=IEA;ISS

TAIR|locus:2179167 AT5G01430 "AT5G01430" [Arabidopsis thaliana (taxid:3702)]

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 92/140 (65%), Positives = 103/140 (73%)

Query:     1 MVSFEMNDRKKXXXXXXXXXXXXXXXXXXXXXDKGLLAMGNILFIAGVSLTIGLKSTMQF 60
             M+SFEMNDRKK                     DKGLLAMGNILFI+GVSLTIG KSTMQF
Sbjct:     1 MMSFEMNDRKKIGLGLTGFGVFFSFLGIVFVFDKGLLAMGNILFISGVSLTIGFKSTMQF 60

Query:    61 FMKRQNYKGTISXXXXXXXXXXXWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWL 120
             FMKRQNYKGTIS           WPILGM+LETYGF VLFSGFWPTL+VF Q+IP+LGW+
Sbjct:    61 FMKRQNYKGTISFGVGFFFVIIGWPILGMMLETYGFFVLFSGFWPTLAVFAQKIPVLGWI 120

Query:   121 FQQPFVRSFFDRYRSRRVPV 140
              QQP++RSFFD+YR +RVPV
Sbjct:   121 IQQPYIRSFFDKYRGKRVPV 140

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0016192 "vesicle-mediated transport" evidence=IEA;ISS

TAIR|locus:2097745 AT3G03180 "AT3G03180" [Arabidopsis thaliana (taxid:3702)]

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 82/140 (58%), Positives = 96/140 (68%)

Query:     1 MVSFEMNDRKKXXXXXXXXXXXXXXXXXXXXXDKGLLAMGNILFIAGVSLTIGLKSTMQF 60
             M S EMND KK                     DKGL+AMGNILF+AGV+LTIG+   +QF
Sbjct:     1 MASLEMNDLKKIGLGLTGFGVFFTFLGVIFVFDKGLIAMGNILFLAGVTLTIGINPAIQF 60

Query:    61 FMKRQNYKGTISXXXXXXXXXXXWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWL 120
             F KRQN+KGTIS           WPI G++LE+YGF+VLFSGFWPTL+VFLQRIP+LGWL
Sbjct:    61 FTKRQNFKGTISFGLGFLLVVFGWPIFGLLLESYGFLVLFSGFWPTLAVFLQRIPLLGWL 120

Query:   121 FQQPFVRSFFDRYRSRRVPV 140
              QQP++RS  DRYR RRVPV
Sbjct:   121 LQQPYIRSLLDRYRGRRVPV 140

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0016192 "vesicle-mediated transport" evidence=IEA;ISS

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA

FB|FBgn0052576 CG32576 [Drosophila melanogaster (taxid:7227)]

 Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 48/100 (48%), Positives = 66/100 (66%)

Query:    33 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXXWPILGMILE 92
             DKGLLA+GNILFI+G++  IG++ TM+FF +R   KGT +           +PI GMI+E
Sbjct:    31 DKGLLAIGNILFISGLACVIGVERTMRFFFQRHKVKGTTAFLGGIVIVLLGFPIFGMIIE 90

Query:    93 TYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDR 132
             +YGF  LFSGF+P    FL R+P+LG LF  PF++    +
Sbjct:    91 SYGFFALFSGFFPVAINFLGRVPVLGSLFNLPFIQKIVQK 130

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0016192 "vesicle-mediated transport" evidence=IEA

MGI|MGI:1914214 Golt1b "golgi transport 1 homolog B (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 45/100 (45%), Positives = 64/100 (64%)

Query:    33 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXXWPILGMILE 92
             DK LLA+GN+LF+AG++  IGL+ T +FF +R   K T             WP++GMI E
Sbjct:    31 DKALLAIGNVLFVAGLAFVIGLERTFRFFFQRHKVKATGFFLGGVFVVLIGWPLIGMIFE 90

Query:    93 TYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDR 132
              YGF +LF GF+P +  F++R+P+LG L   P +RSF D+
Sbjct:    91 IYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLPGIRSFVDK 130

GO:0004871 "signal transducer activity" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0007165 "signal transduction" evidence=ISO

GO:0015031 "protein transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=ISO

UNIPROTKB|Q2YDE3 GOLT1B "Vesicle transport protein GOT1B" [Bos taurus (taxid:9913)]

 Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 44/100 (44%), Positives = 64/100 (64%)

Query:    33 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXXWPILGMILE 92
             DK LLA+GN+LF+AG++  IGL+ T +FF ++   K T             WP++GMI E
Sbjct:    31 DKALLAIGNVLFVAGLAFVIGLERTFRFFFQKHKMKATGFFLGGVFVVLIGWPLIGMIFE 90

Query:    93 TYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDR 132
              YGF +LF GF+P +  F++R+P+LG L   P +RSF D+
Sbjct:    91 IYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLPGIRSFVDK 130

GO:0000139 "Golgi membrane" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

UNIPROTKB|E2QTG1 GOLT1B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 44/100 (44%), Positives = 64/100 (64%)

Query:    33 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXXWPILGMILE 92
             DK LLA+GN+LF+AG++  IGL+ T +FF ++   K T             WP++GMI E
Sbjct:    31 DKALLAIGNVLFVAGLAFVIGLERTFRFFFQKHKMKATGFFLGGVFVVLIGWPLIGMIFE 90

Query:    93 TYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDR 132
              YGF +LF GF+P +  F++R+P+LG L   P +RSF D+
Sbjct:    91 IYGFFLLFRGFFPVVIGFIRRVPVLGSLLNLPGIRSFVDK 130

GO:0016192 "vesicle-mediated transport" evidence=IEA

UNIPROTKB|Q9Y3E0 GOLT1B "Vesicle transport protein GOT1B" [Homo sapiens (taxid:9606)]

 Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 44/100 (44%), Positives = 64/100 (64%)

Query:    33 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXXWPILGMILE 92
             DK LLA+GN+LF+AG++  IGL+ T +FF ++   K T             WP++GMI E
Sbjct:    31 DKALLAIGNVLFVAGLAFVIGLERTFRFFFQKHKMKATGFFLGGVFVVLIGWPLIGMIFE 90

Query:    93 TYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDR 132
              YGF +LF GF+P +  F++R+P+LG L   P +RSF D+
Sbjct:    91 IYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLPGIRSFVDK 130

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IMP

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0007165 "signal transduction" evidence=IMP

UNIPROTKB|F1SR02 GOLT1B "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 44/100 (44%), Positives = 64/100 (64%)

Query:    33 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXXWPILGMILE 92
             DK LLA+GN+LF+AG++  IGL+ T +FF ++   K T             WP++GMI E
Sbjct:    31 DKALLAIGNVLFVAGLAFVIGLERTFRFFFQKHKMKATGFFLGGVFVVLIGWPLIGMIFE 90

Query:    93 TYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDR 132
              YGF +LF GF+P +  F++R+P+LG L   P +RSF D+
Sbjct:    91 IYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLPGIRSFVDK 130

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

RGD|1310691 Golt1b "golgi transport 1B" [Rattus norvegicus (taxid:10116)]

 Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 44/100 (44%), Positives = 64/100 (64%)

Query:    33 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXXWPILGMILE 92
             DK LLA+GN+LF+AG++  IGL+ T +FF ++   K T             WP++GMI E
Sbjct:    31 DKALLAIGNVLFVAGLAFVIGLERTFRFFFQKHKVKATGFFLGGVFVVLIGWPLIGMIFE 90

Query:    93 TYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDR 132
              YGF +LF GF+P +  F++R+P+LG L   P +RSF D+
Sbjct:    91 IYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLPGIRSFVDK 130

GO:0004871 "signal transducer activity" evidence=IEA;ISO

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO

GO:0007165 "signal transduction" evidence=ISO

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9USJ2	GOT1_SCHPO	No assigned EC number	0.3628	0.8071	0.8759	yes	no
Q2NKV8	GOT1A_BOVIN	No assigned EC number	0.5	0.85	0.9015	yes	no
Q54CL4	GOT1_DICDI	No assigned EC number	0.3769	0.9214	0.9347	yes	no
Q20263	GOT1_CAEEL	No assigned EC number	0.4397	1.0	0.9929	yes	no
Q9Y3E0	GOT1B_HUMAN	No assigned EC number	0.5234	0.9142	0.9275	yes	no
Q9DCQ3	GOT1A_MOUSE	No assigned EC number	0.5	0.85	0.8947	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	140
COG5120	129	COG5120, GOT1, Membrane protein involved in Golgi	1e-17
pfam04178	116	pfam04178, Got1, Got1/Sft2-like family	2e-13

>gnl|CDD|227450 COG5120, GOT1, Membrane protein involved in Golgi transport [Intracellular trafficking and secretion]

 Score = 73.3 bits (180), Expect = 1e-17
 Identities = 40/113 (35%), Positives = 70/113 (61%)

Query: 6   MNDRKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQ 65
           + + +K G+ +T  G  F  +GI  FFD+ LL +GN+L I G+ L  G + +M FF++ +
Sbjct: 3   LMNLQKSGVVVTSIGFLFFLVGIFLFFDRALLILGNLLMIIGIFLIAGSRKSMFFFLRPE 62

Query: 66  NYKGTISFGVGFFFVVIGWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILG 118
             +G++ F +G   ++  +P+ G +LET G  +LF  F PT+  FL+ +P++G
Sbjct: 63  KIQGSVIFAMGVLLLLYRFPMFGFLLETLGLFLLFRDFIPTIRTFLRTLPLIG 115

Length = 129

>gnl|CDD|217941 pfam04178, Got1, Got1/Sft2-like family

 Score = 62.1 bits (152), Expect = 2e-13
 Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 5/95 (5%)

Query: 11  KIGLGLTGFGIFFTFLGIIFFF-DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKG 69
           KIG+   G G FF FL ++  F    LL +GNILF+      IG K  ++F   ++    
Sbjct: 1   KIGVLFFGLGFFFLFLPVLLLFPFALLLTLGNILFLGSTGFLIGPKKQLKFMFSKERLPA 60

Query: 70  TISFGVGFFFVVIGWPILGMILETYGFIVLFSGFW 104
           TI F V     +       +IL++YG  +LFS F 
Sbjct: 61  TIVFFVSLVLTL----YFALILKSYGLTLLFSIFQ 91

Traffic through the yeast Golgi complex depends on a member of the syntaxin family of SNARE proteins, Sed5, present in early Golgi cisternae. Got1 is thought to facilitate Sed5-dependent fusion events. This is a family of sequences derived from eukaryotic proteins. They are similar to a region of a SNARE-like protein required for traffic through the Golgi complex, SFT2 protein. This is a conserved protein with four putative transmembrane helices, thought to be involved in vesicular transport in later Golgi compartments. Length = 116

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	140
KOG1743	137	consensus Ferric reductase-like proteins [Inorgani	100.0
COG5120	129	GOT1 Membrane protein involved in Golgi transport	100.0
PF04178	118	Got1: Got1/Sft2-like family ; InterPro: IPR007305	99.71
KOG2887	175	consensus Membrane protein involved in ER to Golgi	96.23

>KOG1743 consensus Ferric reductase-like proteins [Inorganic ion transport and metabolism]

Probab=100.00  E-value=2.5e-54  Score=330.23  Aligned_cols=137  Identities=65%  Similarity=1.211  Sum_probs=135.8

Q ss_pred             eeccccceeeeehhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhHhhcchhhhhhhhhccccceeeehhhhhHHHHhhc
Q 032482            4 FEMNDRKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISFGVGFFFVVIG   83 (140)
Q Consensus         4 ~~~~d~qkiGvgl~~~G~~f~~lGv~lffDr~lLalGNilfl~Gl~l~iG~~kt~~FF~~~~K~kGt~~F~~Gi~lvl~~   83 (140)
                      ||+||.||||+++|++|++|+++|++++|||+|||+||+||++|++++||.|||+.||+||||+|||+.|+.|++++++|
T Consensus         1 ~~l~d~kkiGvg~TgfG~ff~l~Gii~ffD~aLLa~GNlLfi~GvsliiG~~~t~~FF~r~~k~kGti~F~~G~l~vl~~   80 (137)
T KOG1743|consen    1 MELNDLKKIGVGLTGFGVFFFLFGIILFFDKALLAMGNLLFIIGVSLIIGFRKTMQFFFRRQKMKGTISFLGGVLLVLFG   80 (137)
T ss_pred             CccchhhHhCeEEechhHHHHHHHHHHHHhhHHHHhcchHHHHhHHHhhcchhhhhhheehhhcceeeehhhhHHHHHHh
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhccchHHHHHhhhhCCccccccccchHHHHHHHhcCCCCCC
Q 032482           84 WPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDRYRSRRVPV  140 (140)
Q Consensus        84 ~~~iG~iiE~~G~~~LFg~F~P~i~~fl~~~P~ig~il~~P~i~~~~~~l~~~~lPv  140 (140)
                      ||++||++|+||+++||++|+|++++|+|++|++|||+|+|++++.+||+++.|.||
T Consensus        81 wPi~Gm~lE~~Gff~LF~gF~P~i~~flrs~p~lG~i~~~p~i~~~~drl~~~~~pV  137 (137)
T KOG1743|consen   81 WPIFGMILETYGFFVLFRGFFPVIVVFLRSIPVLGWILNLPGIRSFLDRLAGPRVPV  137 (137)
T ss_pred             hHHHHHHHHHHHHHHHHhhhhHHHHHHHHcCccccccccCccHHHHHHHhcCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999887

>COG5120 GOT1 Membrane protein involved in Golgi transport [Intracellular trafficking and secretion]

Probab=100.00  E-value=3.5e-41  Score=254.28  Aligned_cols=128  Identities=36%  Similarity=0.825  Sum_probs=124.9

Q ss_pred             eeccccceeeeehhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhHhhcchhhhhhhhhccccceeeehhhhhHHHHhhc
Q 032482            4 FEMNDRKKIGLGLTGFGIFFTFLGIIFFFDKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISFGVGFFFVVIG   83 (140)
Q Consensus         4 ~~~~d~qkiGvgl~~~G~~f~~lGv~lffDr~lLalGNilfl~Gl~l~iG~~kt~~FF~~~~K~kGt~~F~~Gi~lvl~~   83 (140)
                      ||++|.||+|++.|+.|..|+..|+.+||||+++++||+++++|+.+++|.||+..||.||+|++||+.|+.|.+++++|
T Consensus         1 mwl~~lqk~GV~~t~~Gflffl~Gif~ffDraLl~lGNlL~iiG~fliags~ks~~fflRp~k~~Gsv~F~~G~ll~l~~   80 (129)
T COG5120           1 MWLMNLQKSGVVVTSIGFLFFLVGIFLFFDRALLILGNLLMIIGIFLIAGSRKSMFFFLRPEKIQGSVIFAMGVLLLLYR   80 (129)
T ss_pred             CchhhhhHcCeEEeehhHHHHHHHHHHHhhhHHHHhcCHHHHHHHHHHhcccceEEEEEchhHhhhhHHHHHHHHHHHHH
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhccchHHHHHhhhhCCccccccccchHHHHHHHhcCCC-CCC
Q 032482           84 WPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDRYRSRR-VPV  140 (140)
Q Consensus        84 ~~~iG~iiE~~G~~~LFg~F~P~i~~fl~~~P~ig~il~~P~i~~~~~~l~~~~-lPv  140 (140)
                      ||++|+++|+.|+++||+||+|++.+|||++|++|     |+|    ||+.+++ .||
T Consensus        81 fp~~GF~~E~LG~f~Lf~df~p~i~~fLRt~p~ig-----p~i----drl~g~~~~Pv  129 (129)
T COG5120          81 FPMFGFLLETLGLFLLFRDFIPTIRTFLRTLPLIG-----PYI----DRLLGRLMRPV  129 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-----hhH----HhhhceecCCC
Confidence            99999999999999999999999999999999999     776    8888877 786

>PF04178 Got1: Got1/Sft2-like family ; InterPro: IPR007305 Traffic through the yeast Golgi complex depends on a member of the syntaxin family of SNARE proteins, Sed5, present in early Golgi cisternae

Probab=99.71  E-value=3.3e-17  Score=121.75  Aligned_cols=111  Identities=34%  Similarity=0.662  Sum_probs=102.5

Q ss_pred             eeeeehhhHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHhHhhcchhhhhhhhhccccceeeehhhhhHHHHhhchhhH
Q 032482           11 KIGLGLTGFGIFFTFLGIIFFFDK---GLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISFGVGFFFVVIGWPIL   87 (140)
Q Consensus        11 kiGvgl~~~G~~f~~lGv~lffDr---~lLalGNilfl~Gl~l~iG~~kt~~FF~~~~K~kGt~~F~~Gi~lvl~~~~~i   87 (140)
                      |+|+.++..|.++.++|++++.||   .+.++||+++++|..+++||+|..+++.+|+|+++|++|+.++.++++    .
T Consensus         1 ~~G~~~~~l~~~~~~~~~~~~~~~kFa~l~tlGnil~l~s~~fL~Gp~~q~k~m~~~~R~~~t~~y~~~l~~tl~----~   76 (118)
T PF04178_consen    1 KIGIICFFLSLIFFFLGVLLFFPRKFAILYTLGNILFLASTFFLIGPKKQFKFMFSPKRLIATIIYFISLILTLY----F   76 (118)
T ss_pred             CeehHHHHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHH----H
Confidence            789999999999999999999999   999999999999999999999999999999999999999999999998    9


Q ss_pred             HHHHHHHHHHHhhccch-HHHHHhhhhC-CccccccccchHHHHH
Q 032482           88 GMILETYGFIVLFSGFW-PTLSVFLQRI-PILGWLFQQPFVRSFF  130 (140)
Q Consensus        88 G~iiE~~G~~~LFg~F~-P~i~~fl~~~-P~ig~il~~P~i~~~~  130 (140)
                      |+..|.|++.++|+.+. |..+.++.+. |. |+    |.++++.
T Consensus        77 ~~~~~~~~l~llf~~~q~~al~wy~~s~iP~-g~----~~~~~~~  116 (118)
T PF04178_consen   77 AFILKSYGLTLLFSIFQFPALIWYLLSYIPF-GR----PGLKKFF  116 (118)
T ss_pred             HHHHhhHHHHHHHHHHHHHHHHHHHHHhCCC-hH----HHHHHHh
Confidence            99999999999999988 8888888774 95 53    6666654

Got1 is thought to facilitate Sed5-dependent fusion events []. This is a family of sequences derived from eukaryotic proteins. They are similar to a region of a SNARE-like protein required for traffic through the Golgi complex, SFT2 protein (P38166 from SWISSPROT) []. This is a conserved protein with four putative transmembrane helices, thought to be involved in vesicular transport in later Golgi compartments []. ; GO: 0016192 vesicle-mediated transport

>KOG2887 consensus Membrane protein involved in ER to Golgi transport [Intracellular trafficking, secretion, and vesicular transport]

Probab=96.23  E-value=0.014  Score=47.22  Aligned_cols=91  Identities=19%  Similarity=0.292  Sum_probs=71.8

Q ss_pred             ehhhHHHHHHHHHHHHHhhhh--------HHHHHHHHHHHHhHhhcchhhhhhhhhccccceeeehhhhhHHHHhhc---
Q 032482           15 GLTGFGIFFTFLGIIFFFDKG--------LLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISFGVGFFFVVIG---   83 (140)
Q Consensus        15 gl~~~G~~f~~lGv~lffDr~--------lLalGNilfl~Gl~l~iG~~kt~~FF~~~~K~kGt~~F~~Gi~lvl~~---   83 (140)
                      .+.+.|+++.+++-++|.--.        +.++||++++.+-..++||++=++--+.|+|+-.|+.|+.-.++-++-   
T Consensus        51 ~cl~~gv~c~~l~~~lf~v~~~~~~kFal~~TlGnll~i~sf~fLmGP~~ql~~m~~p~Rl~~T~~~l~~~~~Tly~al~  130 (175)
T KOG2887|consen   51 ICLAGGVLCFLLAMVLFPVLVVSPRKFALLYTLGNLLAIGSFAFLMGPVSQLKHMFSPERLPATLSYLATMVLTLYVALW  130 (175)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccccceeehhHHHHHHHHHHHHHHHHhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH
Confidence            456788999999999988655        679999999999999999999999999999999999999888775531   


Q ss_pred             -----hhhHHHHHHHHHHHHhhccchH
Q 032482           84 -----WPILGMILETYGFIVLFSGFWP  105 (140)
Q Consensus        84 -----~~~iG~iiE~~G~~~LFg~F~P  105 (140)
                           -+++=-++|...+.+-==+++|
T Consensus       131 ~ks~iLtllf~ilq~laliwYslSyiP  157 (175)
T KOG2887|consen  131 LKSKILTLLFCILQVLALIWYSLSYIP  157 (175)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence                 2555566676666555433333

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00