Citrus Sinensis ID: 032788

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130---
Protein Sequence
MSRETVEGLGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHHFIMQS
Secondary Structure (PSIPRED)
ccHHHHHHHccccccccccccccccHHHHHcccccccccccHHHHHHHHHHHHHccccccccHHHHHHHHcccccccccccccHHHHHHHHHHccccccccccHHHHHccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEccccEEEcccccccHcHccHHHHHccccccccHHHHHHHHHHHHHHHccccccccccHHEEEccccccccccccccHHHHHHHHHHHcccHcccccHHHHHcccHHHcccccccccccHHHHHccc
Coil and Loop (DISEMBL)
MSRETVEGLGNALRRKWHVSRWNSLTDQvvnsknggyglpadiwSVGCTVLEmltrcrpyfGVEWALFKIargelppipdsvsrDARDFILKCLqvnpndrptaaqlmehpfvkrplptswglptphhfimqs
Flexible Loop (DISEMBL)
msretveglgnalrrkwhvsrwNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKrplptswglptphhfimqs
Low Complexity Region (SEG)
MSRETVEGLGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHHFIMQS
Disordered region (IsUnstruct)
*********GNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQVN**************FV*******WG***********
Disordered Region (DISOPRED)
**RET****GNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF*********************
Disordered Region (DISEMBL)
**********NALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHHFIMQS
Disordered Region (DISPRO)
*SRETVEGLGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS*GLPT********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSRETVEGLGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHHFIMQS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	133	2.2.26 [Sep-21-2011]
Q39008	608	Mitogen-activated protein	yes	no	0.684	0.149	0.638	3e-28
Q9SZ67	1895	Probable WRKY transcripti	no	no	0.766	0.053	0.584	3e-27
Q9FZ36	651	Mitogen-activated protein	no	no	0.586	0.119	0.536	3e-18
O22040	666	Mitogen-activated protein	no	no	0.586	0.117	0.536	5e-18
Q54XJ4	1495	Probable serine/threonine	yes	no	0.593	0.052	0.444	8e-16
Q9Y6R4	1608	Mitogen-activated protein	yes	no	0.646	0.053	0.426	9e-16
O08648	1597	Mitogen-activated protein	yes	no	0.646	0.053	0.415	8e-15
Q56UN5	1328	Mitogen-activated protein	no	no	0.669	0.067	0.421	1e-14
A2AQW0	1331	Mitogen-activated protein	no	no	0.661	0.066	0.391	3e-14
Q8T2I8	1167	Serine/threonine-protein	no	no	0.616	0.070	0.393	4e-14

>sp|Q39008|M3K1_ARATH Mitogen-activated protein kinase kinase kinase 1 OS=Arabidopsis thaliana GN=MEKK1 PE=1 SV=2

 Score =  123 bits (309), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 60/94 (63%), Positives = 74/94 (78%), Gaps = 3/94 (3%)

Query: 28  QVVNSKNG-GYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSR 84
           +V+N K+  GYG PADIWS+GCTVLEM T   PY  +E   ALF+I RG LP +PD++S 
Sbjct: 499 EVINRKDSDGYGSPADIWSLGCTVLEMCTGQIPYSDLEPVQALFRIGRGTLPEVPDTLSL 558

Query: 85  DARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 118
           DAR FILKCL+VNP +RPTAA+L+ HPFV+RPLP
Sbjct: 559 DARLFILKCLKVNPEERPTAAELLNHPFVRRPLP 592

Involved in the innate immune MAP kinase signaling cascade (MEKK1, MKK4/MKK5 and MPK3/MPK6) downstream of bacterial flagellin receptor FLS2. May be involved in the cold and salinity stress-mediated MAP kinase signaling cascade (MEKK1, MEK1/MKK2 and MPK4/MPK6). Activates downstream MKK2, MKK4 and MKK5.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 2EC: 5

>sp|Q9SZ67|WRK19_ARATH Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1

 Score =  120 bits (300), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 62/106 (58%), Positives = 75/106 (70%), Gaps = 4/106 (3%)

Query: 17   WHVSRWNSLTDQVV-NSKN-GGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIAR 72
            W    WN +  +V+ N K+  GYG PADIWS+GCTVLEMLT   PY  +E   AL+ I  
Sbjct: 1777 WRTPYWNWMAPEVILNPKDYDGYGTPADIWSLGCTVLEMLTGQIPYSDLEIGTALYNIGT 1836

Query: 73   GELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 118
            G+LP IPD +S DARDFIL CL+VNP +RPTAA+L+ HPFV  PLP
Sbjct: 1837 GKLPKIPDILSLDARDFILTCLKVNPEERPTAAELLNHPFVNMPLP 1882

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. May act also as a disease resistance protein with a serine/threonine-protein kinase activity.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FZ36|M3K2_ARATH Mitogen-activated protein kinase kinase kinase 2 OS=Arabidopsis thaliana GN=ANP2 PE=2 SV=1

 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 44/82 (53%), Positives = 58/82 (70%), Gaps = 4/82 (4%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPY---FGVEWALFKIARGEL-PPIPDSVSRDARDFIL 91
           G+   ADIWSVGCTV+EM+T   P+   +    A+F I   +  PPIPD++S DA DF+L
Sbjct: 249 GHSFSADIWSVGCTVIEMVTGKAPWSQQYKEIAAIFHIGTTKSHPPIPDNISSDANDFLL 308

Query: 92  KCLQVNPNDRPTAAQLMEHPFV 113
           KCLQ  PN RPTA++L++HPFV
Sbjct: 309 KCLQQEPNLRPTASELLKHPFV 330

Involved in cortical microtubules organization and stabilization by regulating the phosphorylation state of microtubule-associated proteins such as MAP65-1.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|O22040|ANP1_ARATH Mitogen-activated protein kinase kinase kinase ANP1 OS=Arabidopsis thaliana GN=ANP1 PE=1 SV=2

 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 44/82 (53%), Positives = 55/82 (67%), Gaps = 4/82 (4%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRP----YFGVEWALFKIARGELPPIPDSVSRDARDFIL 91
           G+   ADIWSVGCTV+EM+T   P    Y  V    F       PPIPD++S DA+DF+L
Sbjct: 250 GHSFSADIWSVGCTVIEMVTGKAPWSQQYKEVAAIFFIGTTKSHPPIPDTLSSDAKDFLL 309

Query: 92  KCLQVNPNDRPTAAQLMEHPFV 113
           KCLQ  PN RPTA++L++HPFV
Sbjct: 310 KCLQEVPNLRPTASELLKHPFV 331

May be involved in an oxidative stress-mediated signaling cascade that phosphorylates downstream MAP kinases MPK3 and MPK6. May suppress auxin signaling that promotes cell cycle. Functionally redundant to ANP2 and ANP3 in the positive regulation of cytokinesis.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q54XJ4|Y8901_DICDI Probable serine/threonine-protein kinase DDB_G0278901 OS=Dictyostelium discoideum GN=DDB_G0278901 PE=3 SV=1

 Score = 82.4 bits (202), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 2/81 (2%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC 93
           G     D+WS+GCT++E+LT   PYFG+    AL+KI + + PPIP  +S   +DF+L C
Sbjct: 200 GISTACDVWSLGCTIIELLTGTPPYFGLAPAAALYKIVQEDHPPIPPGISAALKDFLLNC 259

Query: 94  LQVNPNDRPTAAQLMEHPFVK 114
            + + N R +A QL+ HP+VK
Sbjct: 260 FKKDENIRSSAKQLLHHPWVK 280

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9Y6R4|M3K4_HUMAN Mitogen-activated protein kinase kinase kinase 4 OS=Homo sapiens GN=MAP3K4 PE=1 SV=2

 Score = 82.0 bits (201), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 58/89 (65%), Gaps = 3/89 (3%)

Query: 29   VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELPPIPDSVSRD 85
            +  +K  G+G  ADIWS+GC V+EM+T  RP+   E     ++K+  G  PPIP+ +S +
Sbjct: 1514 ITRAKGEGHGRAADIWSLGCVVIEMVTGKRPWHEYEHNFQIMYKVGMGHKPPIPERLSPE 1573

Query: 86   ARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
             +DF+  CL+ +P  R TA+QL++H FVK
Sbjct: 1574 GKDFLSHCLESDPKMRWTASQLLDHSFVK 1602

Component of a protein kinase signal transduction cascade. Activates the CSBP2, P38 and JNK MAPK pathways, but not the ERK pathway. Specifically phosphorylates and activates MAP2K4 and MAP2K6.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|O08648|M3K4_MOUSE Mitogen-activated protein kinase kinase kinase 4 OS=Mus musculus GN=Map3k4 PE=1 SV=2

 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 57/89 (64%), Gaps = 3/89 (3%)

Query: 29   VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELPPIPDSVSRD 85
            +  +K  G+G  ADIWS+GC V+EM+T  RP+   E     ++K+  G  PPIP+ +S +
Sbjct: 1503 ITRAKGEGHGRAADIWSLGCVVIEMVTGKRPWHEYEHNFQIMYKVGMGHKPPIPERLSPE 1562

Query: 86   ARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
             + F+  CL+ +P  R TA+QL++H FVK
Sbjct: 1563 GKAFLSHCLESDPKIRWTASQLLDHAFVK 1591

Component of a protein kinase signal transduction cascade. Activates the CSBP2, P38 and JNK MAPK pathways, but not the ERK pathway. Specifically phosphorylates and activates MAP2K4 and MAP2K6.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q56UN5|M3K19_HUMAN Mitogen-activated protein kinase kinase kinase 19 OS=Homo sapiens GN=MAP3K19 PE=2 SV=1

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/95 (42%), Positives = 60/95 (63%), Gaps = 6/95 (6%)

Query: 25   LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIA--RGELPPIPD 80
            +  +V+N    GYG  +DIWS+GCTV EM T   P   ++   A+F I   RG +PP+PD
Sbjct: 1234 MAPEVINES--GYGRKSDIWSIGCTVFEMATGKPPLASMDRMAAMFYIGAHRGLMPPLPD 1291

Query: 81   SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
              S +A DF+  CL  + ++RP+A QL++H F++R
Sbjct: 1292 HFSENAADFVRMCLTRDQHERPSALQLLKHSFLER 1326

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|A2AQW0|M3K15_MOUSE Mitogen-activated protein kinase kinase kinase 15 OS=Mus musculus GN=Map3k15 PE=3 SV=1

 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 61/92 (66%), Gaps = 4/92 (4%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV---EWALFKIARGEL-PPIPDSVS 83
           ++++    GYG PADIWS+GCT++EM T   P+  +   + A+FK+   ++ P IP+++S
Sbjct: 823 EIIDQGPRGYGAPADIWSLGCTIIEMATSRPPFHELGEPQAAMFKVGMFKIHPEIPEALS 882

Query: 84  RDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
            +AR FIL C + +P  R TAA L++  F+++
Sbjct: 883 AEARAFILSCFEPDPQKRVTAADLLQEGFLRQ 914

May function in a signal transduction pathway that is activated by various cell stresses and leads to apoptosis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q8T2I8|SEPA_DICDI Serine/threonine-protein kinase sepA OS=Dictyostelium discoideum GN=sepA PE=2 SV=1

 Score = 76.6 bits (187), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/89 (39%), Positives = 59/89 (66%), Gaps = 7/89 (7%)

Query: 41  ADIWSVGCTVLEMLTRCRPYF--GVEWALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           +DIWSVGCTV+E+LT   PY+  G   ALF+I + + PP+P+ +S   +D++++C Q +P
Sbjct: 194 SDIWSVGCTVIELLTGSPPYYDLGQMPALFRIVQDDCPPLPEGISPPLKDWLMQCFQKDP 253

Query: 99  NDRPTAAQLMEHPFV-----KRPLPTSWG 122
           N R +A +L++H ++     K+P+    G
Sbjct: 254 NLRISAQKLLKHKWIQASIKKKPVENGAG 282

Serine/threonine-protein kinase involved in the spatial and temporal control system organizing cortical activities in mitotic and postmitotic cells.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	133
356509460	566	PREDICTED: mitogen-activated protein kin	0.751	0.176	0.686	8e-34
224082218	548	predicted protein [Populus trichocarpa]	0.751	0.182	0.696	9e-34
255545546	555	Mitogen-activated protein kinase kinase	0.759	0.181	0.669	5e-33
224066881	558	predicted protein [Populus trichocarpa]	0.751	0.179	0.676	6e-33
302141878	273	unnamed protein product [Vitis vinifera]	0.744	0.362	0.693	5e-32
225459451	567	PREDICTED: mitogen-activated protein kin	0.744	0.174	0.693	6e-32
356518515	555	PREDICTED: mitogen-activated protein kin	0.751	0.180	0.656	3e-31
359486016	559	PREDICTED: mitogen-activated protein kin	0.744	0.177	0.663	5e-31
356557517	440	PREDICTED: mitogen-activated protein kin	0.676	0.204	0.717	6e-31
298204644	719	unnamed protein product [Vitis vinifera]	0.744	0.137	0.663	8e-31

>gi|356509460|ref|XP_003523467.1| PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Glycine max]

 Score =  148 bits (373), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 70/102 (68%), Positives = 81/102 (79%), Gaps = 2/102 (1%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRD 85
           +VV  KN GYGLPAD+WS+GCTVLEMLT   PY  +E   ALF+I +GE PPIPDS+SRD
Sbjct: 459 EVVKGKNKGYGLPADMWSLGCTVLEMLTGQLPYRDLECMQALFRIGKGERPPIPDSLSRD 518

Query: 86  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPH 127
           A+DFIL+CLQVNPNDRPTAAQL+ H FV+RPL  S G   PH
Sbjct: 519 AQDFILQCLQVNPNDRPTAAQLLNHSFVQRPLSQSSGSSFPH 560

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082218|ref|XP_002306607.1| predicted protein [Populus trichocarpa] gi|222856056|gb|EEE93603.1| predicted protein [Populus trichocarpa]

 Score =  148 bits (373), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 71/102 (69%), Positives = 84/102 (82%), Gaps = 2/102 (1%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRD 85
           +VVN+KN GYGLPADIWS+GCTVLEMLTR  PY  +E   ALF+I RG  P +PDS+S D
Sbjct: 442 EVVNNKNQGYGLPADIWSLGCTVLEMLTRQIPYSELESMQALFRIGRGVPPLVPDSLSND 501

Query: 86  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPH 127
           ARDFIL+CLQVNPNDRPTAA L++HPF+KRPLPT  G  +P+
Sbjct: 502 ARDFILQCLQVNPNDRPTAAVLLDHPFMKRPLPTFSGSASPY 543

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545546|ref|XP_002513833.1| Mitogen-activated protein kinase kinase kinase, putative [Ricinus communis] gi|223546919|gb|EEF48416.1| Mitogen-activated protein kinase kinase kinase, putative [Ricinus communis]

 Score =  145 bits (366), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 69/103 (66%), Positives = 83/103 (80%), Gaps = 2/103 (1%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRD 85
           +VVN K  GYGLPADIWS+GCTVLEMLTR  PY  +E   ALF+I +G  PP+PDS+S D
Sbjct: 449 EVVNRKTHGYGLPADIWSLGCTVLEMLTRQVPYSHLECMQALFRIGKGVPPPVPDSLSND 508

Query: 86  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHH 128
           ARDFIL+CLQVNPN RPTAAQL+EH FV++PLP S G  +P++
Sbjct: 509 ARDFILQCLQVNPNGRPTAAQLLEHSFVRQPLPMSSGSASPYY 551

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066881|ref|XP_002302260.1| predicted protein [Populus trichocarpa] gi|222843986|gb|EEE81533.1| predicted protein [Populus trichocarpa]

 Score =  145 bits (365), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 69/102 (67%), Positives = 84/102 (82%), Gaps = 2/102 (1%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRD 85
           +VVN+KN GYGLPADIWS+GCTVLEMLTR  PY  +E   ALF+I RG  P +PDS+S D
Sbjct: 452 EVVNNKNQGYGLPADIWSLGCTVLEMLTRQIPYSELESMQALFRIGRGVPPLVPDSLSND 511

Query: 86  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPH 127
           AR+FIL+C+QVNPNDRPTAA L++HPFVK+ LPTS G  +P+
Sbjct: 512 AREFILQCIQVNPNDRPTAAVLLDHPFVKKLLPTSSGSASPY 553

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302141878|emb|CBI19081.3| unnamed protein product [Vitis vinifera]

 Score =  142 bits (358), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 70/101 (69%), Positives = 80/101 (79%), Gaps = 2/101 (1%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRD 85
           +VVN K  GYGL ADIWS+GCTVLEMLTR  PY  +E   ALF+I +GE PP+PDS+S D
Sbjct: 166 EVVNGKGQGYGLAADIWSLGCTVLEMLTREVPYSHLESMQALFRIGKGEPPPVPDSLSPD 225

Query: 86  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTP 126
           ARDFILKCLQV P+DRPTAAQL+ H FVKRP PTS G  +P
Sbjct: 226 ARDFILKCLQVIPDDRPTAAQLLNHQFVKRPPPTSSGSASP 266

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459451|ref|XP_002284356.1| PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Vitis vinifera]

 Score =  142 bits (357), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 70/101 (69%), Positives = 80/101 (79%), Gaps = 2/101 (1%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRD 85
           +VVN K  GYGL ADIWS+GCTVLEMLTR  PY  +E   ALF+I +GE PP+PDS+S D
Sbjct: 460 EVVNGKGQGYGLAADIWSLGCTVLEMLTREVPYSHLESMQALFRIGKGEPPPVPDSLSPD 519

Query: 86  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTP 126
           ARDFILKCLQV P+DRPTAAQL+ H FVKRP PTS G  +P
Sbjct: 520 ARDFILKCLQVIPDDRPTAAQLLNHQFVKRPPPTSSGSASP 560

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356518515|ref|XP_003527924.1| PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Glycine max]

 Score =  139 bits (351), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/102 (65%), Positives = 79/102 (77%), Gaps = 2/102 (1%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRD 85
           +VV  KN GYGLPADIWS+GCTVLEMLT   PY  +E   AL++I +GE P IPDS+SRD
Sbjct: 448 EVVKGKNKGYGLPADIWSLGCTVLEMLTGQLPYCDLESVRALYRIGKGERPRIPDSLSRD 507

Query: 86  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPH 127
           A+DFIL+CLQV+PNDR TAAQL+ H FV+RPL  S G   PH
Sbjct: 508 AQDFILQCLQVSPNDRATAAQLLNHSFVQRPLSQSSGSSFPH 549

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359486016|ref|XP_002264549.2| PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Vitis vinifera]

 Score =  139 bits (349), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 67/101 (66%), Positives = 81/101 (80%), Gaps = 2/101 (1%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRD 85
           +VVN KN GYGL ADIWS+GCTVLE+LTR  PY  +E   ALF+I +GE PP+ +S+S D
Sbjct: 452 EVVNRKNKGYGLAADIWSLGCTVLEILTRRPPYSHLEGMQALFRIGKGEPPPVSNSLSSD 511

Query: 86  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTP 126
           AR+FILKCLQVNP+DRPTA QL++HPFVKRPL T  G  +P
Sbjct: 512 ARNFILKCLQVNPSDRPTAGQLLDHPFVKRPLHTFSGPQSP 552

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557517|ref|XP_003547062.1| PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Glycine max]

 Score =  139 bits (349), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 66/92 (71%), Positives = 78/92 (84%), Gaps = 2/92 (2%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRD 85
           +VVN +N GYGL ADIWS+GCTVLEMLTR  PY  +E   ALF+I RG+ PP+P+S+S D
Sbjct: 333 EVVNLRNRGYGLAADIWSLGCTVLEMLTRQPPYSHLEGMQALFRIGRGQPPPVPESLSTD 392

Query: 86  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL 117
           ARDFILKCLQVNPN RPTAA+L++HPFVKRPL
Sbjct: 393 ARDFILKCLQVNPNKRPTAARLLDHPFVKRPL 424

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|298204644|emb|CBI23919.3| unnamed protein product [Vitis vinifera]

 Score =  138 bits (347), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 67/101 (66%), Positives = 81/101 (80%), Gaps = 2/101 (1%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRD 85
           +VVN KN GYGL ADIWS+GCTVLE+LTR  PY  +E   ALF+I +GE PP+ +S+S D
Sbjct: 612 EVVNRKNKGYGLAADIWSLGCTVLEILTRRPPYSHLEGMQALFRIGKGEPPPVSNSLSSD 671

Query: 86  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTP 126
           AR+FILKCLQVNP+DRPTA QL++HPFVKRPL T  G  +P
Sbjct: 672 ARNFILKCLQVNPSDRPTAGQLLDHPFVKRPLHTFSGPQSP 712

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	133
TAIR|locus:2133559	608	MEKK1 "MAPK/ERK kinase kinase	0.714	0.156	0.612	4.6e-27
TAIR|locus:2118116	1895	WRKY19 [Arabidopsis thaliana (	0.781	0.054	0.583	6.5e-27
TAIR|locus:2133539	773	MAPKKK9 "mitogen-activated pro	0.812	0.139	0.539	3e-26
TAIR|locus:2133529	560	MEKK3 "MAPK/ERK kinase kinase	0.669	0.158	0.576	2.2e-22
TAIR|locus:2026674	883	YDA "YODA" [Arabidopsis thalia	0.691	0.104	0.510	7.5e-19
TAIR|locus:2024832	609	MAP3KA "mitogen-activated prot	0.669	0.146	0.505	2.6e-17
TAIR|locus:2035989	666	NP1 "NPK1-related protein kina	0.586	0.117	0.536	1.4e-16
UNIPROTKB|E1BXN6	1565	MAP3K4 "Uncharacterized protei	0.646	0.054	0.449	2.8e-16
UNIPROTKB|F1SB84	297	LOC100518100 "Uncharacterized	0.646	0.289	0.415	2.9e-16
UNIPROTKB|I3LSD0	114	LOC100518100 "Uncharacterized	0.646	0.754	0.415	2.9e-16

TAIR|locus:2133559 MEKK1 "MAPK/ERK kinase kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 311 (114.5 bits), Expect = 4.6e-27, P = 4.6e-27
 Identities = 60/98 (61%), Positives = 76/98 (77%)

Query:    25 LTDQVVNSKNG-GYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDS 81
             +  +V+N K+  GYG PADIWS+GCTVLEM T   PY  +E   ALF+I RG LP +PD+
Sbjct:   496 MAPEVINRKDSDGYGSPADIWSLGCTVLEMCTGQIPYSDLEPVQALFRIGRGTLPEVPDT 555

Query:    82 VSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPT 119
             +S DAR FILKCL+VNP +RPTAA+L+ HPFV+RPLP+
Sbjct:   556 LSLDARLFILKCLKVNPEERPTAAELLNHPFVRRPLPS 593

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046686 "response to cadmium ion" evidence=IGI

GO:0006970 "response to osmotic stress" evidence=IGI;IEP

GO:0009651 "response to salt stress" evidence=IEP

GO:0004709 "MAP kinase kinase kinase activity" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009611 "response to wounding" evidence=RCA;IDA

GO:0003677 "DNA binding" evidence=IDA

GO:0019900 "kinase binding" evidence=IPI

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0000165 "MAPK cascade" evidence=IMP;RCA;IPI

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0009556 "microsporogenesis" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0052543 "callose deposition in cell wall" evidence=RCA

TAIR|locus:2118116 WRKY19 [Arabidopsis thaliana (taxid:3702)]

 Score = 318 (117.0 bits), Expect = 6.5e-27, P = 6.5e-27
 Identities = 63/108 (58%), Positives = 77/108 (71%)

Query:    17 WHVSRWNSLTDQVV-NSKN-GGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR 72
             W    WN +  +V+ N K+  GYG PADIWS+GCTVLEMLT   PY  +E   AL+ I  
Sbjct:  1777 WRTPYWNWMAPEVILNPKDYDGYGTPADIWSLGCTVLEMLTGQIPYSDLEIGTALYNIGT 1836

Query:    73 GELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 120
             G+LP IPD +S DARDFIL CL+VNP +RPTAA+L+ HPFV  PLP+S
Sbjct:  1837 GKLPKIPDILSLDARDFILTCLKVNPEERPTAAELLNHPFVNMPLPSS 1884

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0006952 "defense response" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0043531 "ADP binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009556 "microsporogenesis" evidence=RCA

GO:0052543 "callose deposition in cell wall" evidence=RCA

TAIR|locus:2133539 MAPKKK9 "mitogen-activated protein kinase kinase kinase 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 306 (112.8 bits), Expect = 3.0e-26, P = 3.0e-26
 Identities = 61/113 (53%), Positives = 80/113 (70%)

Query:    11 NALRRKWHVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WAL 67
             N ++ +     W  +  +V+N K N GY  PADIWS+GCTVLEM T   PY  +E   AL
Sbjct:   652 NDIKSRKETLFW--MAPEVINRKDNDGYRSPADIWSLGCTVLEMCTGQIPYSDLEPVEAL 709

Query:    68 FKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 120
             F+I RG LP +PD++S DAR FILKCL++NP +RPTA +L+ HPFV+RPLP+S
Sbjct:   710 FRIRRGTLPEVPDTLSLDARHFILKCLKLNPEERPTATELLNHPFVRRPLPSS 762

GO:0005737 "cytoplasm" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0031347 "regulation of defense response" evidence=IMP

TAIR|locus:2133529 MEKK3 "MAPK/ERK kinase kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 267 (99.0 bits), Expect = 2.2e-22, P = 2.2e-22
 Identities = 53/92 (57%), Positives = 67/92 (72%)

Query:    25 LTDQVVNSKNG-GYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDS 81
             +  +V+N K+  G G PADIWS+GCTVLEM T   PY  ++   A FKI RG LP +PD+
Sbjct:   466 MAPEVINRKDSDGNGSPADIWSLGCTVLEMCTGQIPYSDLKPIQAAFKIGRGTLPDVPDT 525

Query:    82 VSRDARDFILKCLQVNPNDRPTAAQLMEHPFV 113
             +S DAR FIL CL+VNP +RPTAA+L+ HPFV
Sbjct:   526 LSLDARHFILTCLKVNPEERPTAAELLHHPFV 557

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009556 "microsporogenesis" evidence=RCA

GO:0052543 "callose deposition in cell wall" evidence=RCA

TAIR|locus:2026674 YDA "YODA" [Arabidopsis thaliana (taxid:3702)]

 Score = 238 (88.8 bits), Expect = 7.5e-19, P = 7.5e-19
 Identities = 50/98 (51%), Positives = 65/98 (66%)

Query:    25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRP---YFGVEWALFKIARG-ELPPIPD 80
             +  +V+ + NG   L  DIWS+GCTVLEM T   P   Y GV  A+FKI    ELP IPD
Sbjct:   566 MAPEVIKNSNGS-NLAVDIWSLGCTVLEMATTKPPWSQYEGVP-AMFKIGNSKELPDIPD 623

Query:    81 SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 118
              +S + +DF+ KCLQ NP +RPTAAQL++H FV+  +P
Sbjct:   624 HLSEEGKDFVRKCLQRNPANRPTAAQLLDHAFVRNVMP 661

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010103 "stomatal complex morphogenesis" evidence=IMP

GO:0007155 "cell adhesion" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

GO:0010229 "inflorescence development" evidence=IMP

TAIR|locus:2024832 MAP3KA "mitogen-activated protein kinase kinase kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 221 (82.9 bits), Expect = 2.6e-17, P = 2.6e-17
 Identities = 47/93 (50%), Positives = 62/93 (66%)

Query:    25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARG-ELPPIPDS 81
             +  +VV S+NG Y    DIWS+GCT+LEM T   P+   E   A+FKI    + P IPD 
Sbjct:   380 MAPEVVMSQNG-YTHAVDIWSLGCTILEMATSKPPWSQFEGVAAIFKIGNSKDTPEIPDH 438

Query:    82 VSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
             +S DA++FI  CLQ NP  RPTA+QL+EHPF++
Sbjct:   439 LSNDAKNFIRLCLQRNPTVRPTASQLLEHPFLR 471

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006487 "protein N-linked glycosylation" evidence=RCA

TAIR|locus:2035989 NP1 "NPK1-related protein kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 215 (80.7 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 44/82 (53%), Positives = 59/82 (71%)

Query:    36 GYGLPADIWSVGCTVLEMLTRCRPY---FGVEWALFKIARGEL-PPIPDSVSRDARDFIL 91
             G+   ADIWSVGCTV+EM+T   P+   +    A+F I   +  PPIPD++S DA+DF+L
Sbjct:   250 GHSFSADIWSVGCTVIEMVTGKAPWSQQYKEVAAIFFIGTTKSHPPIPDTLSSDAKDFLL 309

Query:    92 KCLQVNPNDRPTAAQLMEHPFV 113
             KCLQ  PN RPTA++L++HPFV
Sbjct:   310 KCLQEVPNLRPTASELLKHPFV 331

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IDA

GO:0009908 "flower development" evidence=IGI

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0007155 "cell adhesion" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

GO:0004709 "MAP kinase kinase kinase activity" evidence=ISS

UNIPROTKB|E1BXN6 MAP3K4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 217 (81.4 bits), Expect = 2.8e-16, P = 2.8e-16
 Identities = 40/89 (44%), Positives = 59/89 (66%)

Query:    29 VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW---ALFKIARGELPPIPDSVSRD 85
             +  +K  G+G  ADIWS+GC V+EM+T  RP+   E     ++++  G  PPIPD VS +
Sbjct:  1471 ITRAKGEGHGRAADIWSLGCVVIEMVTGKRPWHEYEHNFQIMYRVGMGHKPPIPDKVSPE 1530

Query:    86 ARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
              +DF+  CL+ +P  R TA+QL++HPFVK
Sbjct:  1531 GKDFLCHCLESDPKMRWTASQLLDHPFVK 1559

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0001890 "placenta development" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0019100 "male germ-line sex determination" evidence=IEA

GO:0043507 "positive regulation of JUN kinase activity" evidence=IEA

GO:0060718 "chorionic trophoblast cell differentiation" evidence=IEA

UNIPROTKB|F1SB84 LOC100518100 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 37/89 (41%), Positives = 57/89 (64%)

Query:    29 VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW---ALFKIARGELPPIPDSVSRD 85
             +  +K  G+G  ADIWS+GC V+EM+T  RP+   E     ++K+  G  PPIP+ +S +
Sbjct:   203 ITRAKGEGHGRAADIWSLGCVVIEMVTGKRPWHEYEHNFQIMYKVGMGHKPPIPERLSPE 262

Query:    86 ARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
              +DF+  CL+  P  R TA+QL++H F+K
Sbjct:   263 GKDFLAHCLESEPRMRWTASQLLDHSFIK 291

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|I3LSD0 LOC100518100 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 37/89 (41%), Positives = 57/89 (64%)

Query:    29 VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW---ALFKIARGELPPIPDSVSRD 85
             +  +K  G+G  ADIWS+GC V+EM+T  RP+   E     ++K+  G  PPIP+ +S +
Sbjct:    20 ITRAKGEGHGRAADIWSLGCVVIEMVTGKRPWHEYEHNFQIMYKVGMGHKPPIPERLSPE 79

Query:    86 ARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
              +DF+  CL+  P  R TA+QL++H F+K
Sbjct:    80 GKDFLAHCLESEPRMRWTASQLLDHSFIK 108

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.V.5114.1	hypothetical protein (544 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_fgenesh4_pg.C_LG_II1481	hypothetical protein (372 aa)			•			•		•	0.821
	eugene3.00080074	mitogen-activated protein kinase kinase Group C (EC-2.7.12.2) (356 aa)			•			•		•	0.817
	estExt_fgenesh4_pm.C_LG_VI0403	hypothetical protein (355 aa)			•			•		•	0.817
	estExt_Genewise1_v1.C_1450125	hypothetical protein (357 aa)			•			•		•	0.817
	eugene3.00180195	hypothetical protein (364 aa)			•			•		•	0.817
	gw1.IV.2493.1	hypothetical protein (1122 aa)						•		•	0.800

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	133
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	3e-39
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-36
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	9e-28
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-27
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-27
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	4e-26
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-23
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	2e-23
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-22
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	2e-22
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	3e-22
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	6e-22
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	2e-20
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	3e-20
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	5e-20
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	7e-20
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	2e-19
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	6e-19
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	2e-18
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	6e-18
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	5e-17
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	6e-17
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	9e-17
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	8e-16
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	2e-15
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	3e-15
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	5e-15
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	7e-15
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	7e-15
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	9e-15
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	9e-15
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	1e-14
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	3e-14
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-13
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	2e-13
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	7e-13
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	8e-13
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	1e-12
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	1e-12
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	1e-12
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	2e-12
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	2e-12
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	2e-12
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	2e-12
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	3e-12
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	3e-12
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	3e-12
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	7e-12
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	7e-12
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-11
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-11
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	1e-11
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	1e-11
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	2e-11
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-11
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	2e-11
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-11
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-11
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	3e-11
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	3e-11
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	3e-11
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	3e-11
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	4e-11
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	4e-11
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	1e-10
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	2e-10
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	3e-10
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	3e-10
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	3e-10
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	5e-10
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	6e-10
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	8e-10
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	9e-10
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	9e-10
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	1e-09
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	1e-09
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	2e-09
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	2e-09
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	2e-09
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	4e-09
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	5e-09
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	5e-09
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	9e-09
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	1e-08
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	1e-08
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	1e-08
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	1e-08
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	1e-08
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	2e-08
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	3e-08
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	3e-08
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	4e-08
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	5e-08
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	7e-08
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	7e-08
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	7e-08
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	7e-08
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	1e-07
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-07
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	1e-07
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	2e-07
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	4e-07
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	1e-06
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	1e-06
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	2e-06
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	2e-06
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	2e-06
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	2e-06
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	2e-06
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	2e-06
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	2e-06
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	3e-06
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	4e-06
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	4e-06
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	4e-06
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	5e-06
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	5e-06
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	6e-06
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	1e-05
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	2e-05
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	2e-05
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	2e-05
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	3e-05
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	3e-05
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	3e-05
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	3e-05
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	3e-05
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	5e-05
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	5e-05
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	5e-05
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	6e-05
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	9e-05
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-04
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	1e-04
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	1e-04
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	2e-04
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	2e-04
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	2e-04
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	2e-04
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	2e-04
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	2e-04
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	2e-04
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	3e-04
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	3e-04
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	3e-04
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	3e-04
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	3e-04
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	4e-04
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	4e-04
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	4e-04
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	4e-04
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	5e-04
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	5e-04
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	6e-04
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	7e-04
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	7e-04
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	7e-04
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	8e-04
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	0.001
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	0.001
cd08227	327	cd08227, PK_STRAD_alpha, Pseudokinase domain of ST	0.001
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	0.001
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	0.001
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	0.001
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	0.001
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	0.002
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	0.002
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	0.003
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	0.003
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	0.003
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	0.003
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	0.004
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	0.004
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	0.004

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score =  131 bits (332), Expect = 3e-39
 Identities = 56/90 (62%), Positives = 69/90 (76%), Gaps = 6/90 (6%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPY---FGVEWALFKIAR-GELPPIPDSVS 83
           +V+  + GGYGL ADIWS+GCTVLEM T   P+    GV  A+FKI R  ELPPIPD +S
Sbjct: 171 EVIAQQ-GGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA-AVFKIGRSKELPPIPDHLS 228

Query: 84  RDARDFILKCLQVNPNDRPTAAQLMEHPFV 113
            +A+DFILKCLQ +P+ RPTAA+L+EHPFV
Sbjct: 229 DEAKDFILKCLQRDPSLRPTAAELLEHPFV 258

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  124 bits (313), Expect = 3e-36
 Identities = 40/85 (47%), Positives = 57/85 (67%), Gaps = 4/85 (4%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIAR-GELPPIPDSVSRDARD 88
           +   YG  ADIWS+GCTV+EM T   P+  +     AL+KI   GE P IP+ +S +A+D
Sbjct: 176 RGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKD 235

Query: 89  FILKCLQVNPNDRPTAAQLMEHPFV 113
           F+ KCL+ +P  RPTA +L++HPF+
Sbjct: 236 FLRKCLRRDPKKRPTADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score =  102 bits (256), Expect = 9e-28
 Identities = 41/88 (46%), Positives = 58/88 (65%), Gaps = 5/88 (5%)

Query: 31  NSKNGGYGLPADIWSVGCTVLEMLTRCRPY--FGVEWAL-FKIARGELPPIPDS--VSRD 85
             K  G+G  ADIWS+GC VLEM T  RP+     E+ + F +  G  PPIPDS  +S +
Sbjct: 177 GGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPE 236

Query: 86  ARDFILKCLQVNPNDRPTAAQLMEHPFV 113
            +DF+ +CL+ +P  RPTA++L++HPFV
Sbjct: 237 GKDFLDRCLESDPKKRPTASELLQHPFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  101 bits (255), Expect = 1e-27
 Identities = 35/75 (46%), Positives = 57/75 (76%), Gaps = 2/75 (2%)

Query: 41  ADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           +DIWS+GCTV+E+LT   PY+ +    ALF+I + + PP+P+ +S + +DF+++C Q +P
Sbjct: 180 SDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEGISPELKDFLMQCFQKDP 239

Query: 99  NDRPTAAQLMEHPFV 113
           N RPTA QL++HP++
Sbjct: 240 NLRPTAKQLLKHPWI 254

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  101 bits (254), Expect = 1e-27
 Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 5/86 (5%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIP---DSVSRDAR 87
              GYG   DIWS+G  + E+LT   P+ G      LFK      PP P     +S +A+
Sbjct: 169 LGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDISPEAK 228

Query: 88  DFILKCLQVNPNDRPTAAQLMEHPFV 113
           D I K L  +P  R TA + ++HPF 
Sbjct: 229 DLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 97.7 bits (244), Expect = 4e-26
 Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 4/84 (4%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYF--GVEWALFKIARGELPPIPDSV--SRDARD 88
               Y   ADIWS+G T +E+     PY       ALFKIA    P + +    S + +D
Sbjct: 170 NGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKD 229

Query: 89  FILKCLQVNPNDRPTAAQLMEHPF 112
           F+ KCLQ NP  RPTA QL++HPF
Sbjct: 230 FLKKCLQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 91.1 bits (227), Expect = 2e-23
 Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 6/84 (7%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFK-IARGELPPIPDS-VSRDARDFI 90
           Y   ADIWS+G T+LE      P+        + L + I  G  P +P    S + RDFI
Sbjct: 177 YSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFI 236

Query: 91  LKCLQVNPNDRPTAAQLMEHPFVK 114
             CLQ +P  RP+AA+L++HPF+K
Sbjct: 237 SACLQKDPKKRPSAAELLQHPFIK 260

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 91.1 bits (227), Expect = 2e-23
 Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 3/91 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV-SRDARDF 89
           K  GY   ADIWS+G T +E+     P   +     LF I +   P +  +  S+  +DF
Sbjct: 171 KQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDF 230

Query: 90  ILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 120
           +  CL  +P +RP+A +L++H F+K+   TS
Sbjct: 231 VSLCLNKDPKERPSAKELLKHKFIKKAKKTS 261

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 88.8 bits (221), Expect = 1e-22
 Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 8/92 (8%)

Query: 30  VNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG-----VEWALFKIARGELP---PIPDS 81
           V     GYG   D+WS+G  + E+LT   P+ G         + +I    L    P   S
Sbjct: 169 VLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSS 228

Query: 82  VSRDARDFILKCLQVNPNDRPTAAQLMEHPFV 113
            S +A+D I KCL  +P+ RPTA ++++HP+ 
Sbjct: 229 GSEEAKDLIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 88.7 bits (220), Expect = 2e-22
 Identities = 36/90 (40%), Positives = 62/90 (68%), Gaps = 4/90 (4%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV---EWALFKIARGEL-PPIPDSVS 83
           +V++    GYG PADIWS+GCT++EM T   P+  +   + A+FK+   ++ P IP+S+S
Sbjct: 179 EVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLS 238

Query: 84  RDARDFILKCLQVNPNDRPTAAQLMEHPFV 113
            +A++FIL+C + +P+ R +A  L++ PF+
Sbjct: 239 AEAKNFILRCFEPDPDKRASAHDLLQDPFL 268

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 87.9 bits (218), Expect = 3e-22
 Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 5/89 (5%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL-PPIPDSVSR 84
           +V++ +  GYG  AD+WSVGCTV+EMLT   P+   E   A+FKIA     P +P  VS 
Sbjct: 177 EVISGE--GYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSP 234

Query: 85  DARDFILKCLQVNPNDRPTAAQLMEHPFV 113
           DAR+F+ +    N   RP+A +L+ H FV
Sbjct: 235 DARNFLRRTFVENAKKRPSAEELLRHFFV 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 87.5 bits (217), Expect = 6e-22
 Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 7/92 (7%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKI-ARGELPPIPDSV-- 82
           +V++S + GY    DIWS+GC VLEM    RP+   E   A+FK+  +   PPIP  V  
Sbjct: 180 EVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSM 239

Query: 83  --SRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
             S  A DF+  C  +NP++RPTA +L++HPF
Sbjct: 240 NLSPVALDFLNACFTINPDNRPTARELLQHPF 271

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 83.7 bits (207), Expect = 2e-20
 Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 5/89 (5%)

Query: 32  SKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA-----LFKIARGELPPIPDSVSRDA 86
           ++N  Y + +D+WS+G ++LEM     PY    +A     L  I  G+ P +P   S DA
Sbjct: 179 NQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDA 238

Query: 87  RDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
           +DF+ KCL   PN RPT AQL+EHP++ +
Sbjct: 239 QDFVAKCLNKIPNRRPTYAQLLEHPWLVK 267

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 83.0 bits (205), Expect = 3e-20
 Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 2/83 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFI 90
           K   Y   ADIWS+GC V+EMLT   P+       A+FKI     P IP ++S +A DF+
Sbjct: 185 KQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIPSNISSEAIDFL 244

Query: 91  LKCLQVNPNDRPTAAQLMEHPFV 113
            K  +++ N RPTAA+L++HPF+
Sbjct: 245 EKTFEIDHNKRPTAAELLKHPFL 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 82.2 bits (204), Expect = 5e-20
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 2/83 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA--LFKIARGELPPIPDSVSRDARDFI 90
           +N  Y   +DIWS+GC + E+ T   P+ G        KI +G+ PPIP   S + R+ +
Sbjct: 176 QNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPSQYSSELRNLV 235

Query: 91  LKCLQVNPNDRPTAAQLMEHPFV 113
              LQ +P +RP+ AQ+++ PF+
Sbjct: 236 SSLLQKDPEERPSIAQILQSPFI 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 81.9 bits (203), Expect = 7e-20
 Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 6/96 (6%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV--EWALFKIARGELPPI--PDSVSR 84
           V+  K+  YG   DIWS+G   +EM     PY       ALF I    +PP+  P+  S 
Sbjct: 187 VIKRKD--YGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSP 244

Query: 85  DARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 120
           + +DF+ KCL  +P  RP+A +L++HPF+K+  P  
Sbjct: 245 EFKDFLNKCLVKDPEKRPSAEELLQHPFLKKACPKE 280

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 80.3 bits (198), Expect = 2e-19
 Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 6/81 (7%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWA-----LFKIARG-ELPPIPDSVSRDARDFI 90
           YG   D+WSVGC ++EM T   P+   + +     +FKIA     P IP+ +S   RD  
Sbjct: 185 YGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVT 244

Query: 91  LKCLQVNPNDRPTAAQLMEHP 111
           L+CL++ P DRP + +L++HP
Sbjct: 245 LRCLELQPEDRPPSRELLKHP 265

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 79.2 bits (195), Expect = 6e-19
 Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 6/90 (6%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIA--RGELPPIPDSVS 83
           +V+N    GYG  +DIWS+GCTV EM T   P   ++   A+F I   RG +P +PDS S
Sbjct: 178 EVINES--GYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFS 235

Query: 84  RDARDFILKCLQVNPNDRPTAAQLMEHPFV 113
             A DF+  CL  + ++RP+A QL+ H F+
Sbjct: 236 AAAIDFVTSCLTRDQHERPSALQLLRHDFL 265

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 77.6 bits (192), Expect = 2e-18
 Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 6/85 (7%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF--KIARGELPPIPDSVSRDARDFI 90
              GYG   D WS+G  + EMLT   P++  +      KI +  L   P+ +S +ARD I
Sbjct: 166 LGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLR-FPEFLSPEARDLI 224

Query: 91  LKCLQVNPNDRPT---AAQLMEHPF 112
              LQ +P  R     A ++  HPF
Sbjct: 225 SGLLQKDPTKRLGSGGAEEIKAHPF 249

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 76.7 bits (189), Expect = 6e-18
 Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 4/89 (4%)

Query: 31  NSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDA 86
             K+  Y   ADIWS+G T++E+     P+  +     L KI + E P +  P   S   
Sbjct: 179 TFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSF 238

Query: 87  RDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
            DF+  CL  +P+DRPTAA+L++HPFV  
Sbjct: 239 NDFLKSCLVKDPDDRPTAAELLKHPFVSD 267

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 74.3 bits (182), Expect = 5e-17
 Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 4/82 (4%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL-PPIPDSVSRDARDFILK 92
           GYG  AD+WS+GCTV+EMLT   P+   E   A+FKIA     P +P  +S  ARDF L 
Sbjct: 185 GYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDF-LG 243

Query: 93  CLQVNPNDRPTAAQLMEHPFVK 114
           C+ V    RP+A +L+ HPF +
Sbjct: 244 CIFVEARHRPSAEELLRHPFAQ 265

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 74.5 bits (183), Expect = 6e-17
 Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 3/87 (3%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPI-PDSVSRDARDFIL 91
           G Y    D+WS+G T +E+  R  P F +    AL+ IA+ + P +  +  S   R+F+ 
Sbjct: 189 GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVD 248

Query: 92  KCLQVNPNDRPTAAQLMEHPFVKRPLP 118
            CLQ  P DRP++ +L++H FV R  P
Sbjct: 249 SCLQKIPQDRPSSEELLKHRFVLRERP 275

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 73.5 bits (181), Expect = 9e-17
 Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 8/84 (9%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP----IPDSVSRDARDF 89
           GY   ADIWS+G T +EM     PY  +    A+F I     PP     P+  S +  DF
Sbjct: 175 GYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNK--PPPTLSDPEKWSPEFNDF 232

Query: 90  ILKCLQVNPNDRPTAAQLMEHPFV 113
           + KCL  +P +RP+A QL++HPF+
Sbjct: 233 VKKCLVKDPEERPSAIQLLQHPFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 70.8 bits (174), Expect = 8e-16
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 8/89 (8%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCRPY-------FGVEWALFKIARGELPPIPDSV-SRDA 86
             Y + +DIWS+G +++E+ T   PY        G+   L  I     P +P    S D 
Sbjct: 174 NDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDF 233

Query: 87  RDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
           +DF+  CL  +P +RP+  +L+EHPF+K+
Sbjct: 234 QDFVNLCLIKDPRERPSYKELLEHPFIKK 262

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 69.7 bits (170), Expect = 2e-15
 Identities = 42/92 (45%), Positives = 56/92 (60%), Gaps = 6/92 (6%)

Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPY--FGVEWALFKIARGELPP-IPDS 81
           ++ +V++ +  GYG  AD+WSV CTV+EMLT   P+  +    A+FKIA     P +PD 
Sbjct: 176 MSPEVISGE--GYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDG 233

Query: 82  VSRDARDFILKCLQVNPNDRPTAAQLMEHPFV 113
           VS   RDF LK + V    RPTA  L+ HPFV
Sbjct: 234 VSDACRDF-LKQIFVEEKRRPTAEFLLRHPFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 69.0 bits (169), Expect = 3e-15
 Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 2/83 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRDARDFI 90
           K   Y   +DIWS+GC + EM T   P+    ++   +K+ RG+ PPIP   S+D ++FI
Sbjct: 174 KGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIPPIYSQDLQNFI 233

Query: 91  LKCLQVNPNDRPTAAQLMEHPFV 113
              LQV P  RP   +++  P V
Sbjct: 234 RSMLQVKPKLRPNCDKILASPAV 256

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 68.9 bits (169), Expect = 5e-15
 Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 6/88 (6%)

Query: 31  NSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI----PDSVSR 84
             + GGY    DIW++G T +E+     P F +    ALF I++   PP      +  S 
Sbjct: 175 VERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSP 234

Query: 85  DARDFILKCLQVNPNDRPTAAQLMEHPF 112
              DFI KCL  +P  RPTA +L++HPF
Sbjct: 235 VFHDFIKKCLTKDPKKRPTATKLLQHPF 262

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 68.9 bits (168), Expect = 7e-15
 Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 4/87 (4%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDARD 88
           K+  Y   ADIWS+G T++EM     P+  +     L KIA+ E P +  P   S + RD
Sbjct: 188 KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRD 247

Query: 89  FILKCLQVNPNDRPTAAQLMEHPFVKR 115
           F+   L  +P  RP+AAQL+EHPFV  
Sbjct: 248 FLKTALDKHPETRPSAAQLLEHPFVSS 274

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 68.5 bits (167), Expect = 7e-15
 Identities = 41/81 (50%), Positives = 49/81 (60%), Gaps = 4/81 (4%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPY--FGVEWALFKIARGEL-PPIPDSVSRDARDFILK 92
           GYG  ADIWSVGCTV+EMLT   P+  F    A+FKIA     P +P  VS   RDF LK
Sbjct: 185 GYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDF-LK 243

Query: 93  CLQVNPNDRPTAAQLMEHPFV 113
            + V    RP+A +L+ H FV
Sbjct: 244 RIFVEAKLRPSADELLRHTFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 68.2 bits (167), Expect = 9e-15
 Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 8/85 (9%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWA-----LFKIARGELPPIP-DSVSRDARDF 89
           GY + +D+WS+G T++E+ T   PY    W      L ++     P +P +  S + +DF
Sbjct: 183 GYDVKSDVWSLGITMIELATGRFPY--DSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDF 240

Query: 90  ILKCLQVNPNDRPTAAQLMEHPFVK 114
           + KCL+ N  +RP   +L++HPF +
Sbjct: 241 VNKCLKKNYKERPNYPELLQHPFFE 265

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 68.7 bits (168), Expect = 9e-15
 Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 8/105 (7%)

Query: 34  NGGY-GLPADIWSVGCTVLEMLTRCRPYFGV----EWA--LFKIARGELPPIPDSVSRDA 86
           +G Y G   DIWS+G ++LE      P FGV    +WA  +  I   + P  P + SR+ 
Sbjct: 246 HGAYDGYAGDIWSLGVSILEFYLGRFP-FGVGRQGDWASLMCAICMSQPPEAPATASREF 304

Query: 87  RDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHHFIM 131
           R FI  CLQ  P  R +A QL++HPF+ R  P         H ++
Sbjct: 305 RHFISCCLQREPAKRWSAMQLLQHPFILRAQPGQGQGGPNLHQLL 349

Length = 353

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 67.9 bits (167), Expect = 1e-14
 Identities = 32/134 (23%), Positives = 47/134 (35%), Gaps = 47/134 (35%)

Query: 25  LTDQVV-----------NSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWAL------ 67
           LT+ VV           +S    Y    DIWSVGC   E+LTR +P F     +      
Sbjct: 163 LTEYVVTRWYRAPELLLSSSR--YTKAIDIWSVGCIFAELLTR-KPLFPGRDYIDQLNLI 219

Query: 68  ----------------------FKIARGELPPIP-----DSVSRDARDFILKCLQVNPND 100
                                 +  +  + P  P        S +A D + K L  +P  
Sbjct: 220 VEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKK 279

Query: 101 RPTAAQLMEHPFVK 114
           R TA + + HP++ 
Sbjct: 280 RITADEALAHPYLA 293

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 66.5 bits (163), Expect = 3e-14
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 2/79 (2%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWALF--KIARGELPPIPDSVSRDARDFILKCL 94
           Y   +DIWS+GC + E+     P+          KI  G+   IP   S +  + I   L
Sbjct: 187 YDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRIPYRYSSELNEVIKSML 246

Query: 95  QVNPNDRPTAAQLMEHPFV 113
            V+P+ RP+  +L++ P +
Sbjct: 247 NVDPDKRPSTEELLQLPLI 265

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 64.5 bits (158), Expect = 2e-13
 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 7/78 (8%)

Query: 41  ADIWSVGCTVLEMLTRCRPYF--GVEWALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           +D+W++GC + +MLT  +P F    E+  F+         P +   DA+D I K L ++P
Sbjct: 203 SDLWALGCIIYQMLT-GKPPFRGSNEYLTFQKILKLEYSFPPNFPPDAKDLIEKLLVLDP 261

Query: 99  NDRPTA----AQLMEHPF 112
            DR        +L  HPF
Sbjct: 262 QDRLGVNEGYDELKAHPF 279

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 64.3 bits (157), Expect = 2e-13
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 5/90 (5%)

Query: 31  NSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW---ALFKIARGELPPIP--DSVSRD 85
              N  Y + AD+WS+G +++E+ T   PY   +     L KI + E P +P  +  S D
Sbjct: 189 PDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPD 248

Query: 86  ARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
              F+  CL  +   RP   +L++HPF++R
Sbjct: 249 FCSFVDLCLTKDHRKRPKYRELLQHPFIRR 278

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 63.1 bits (154), Expect = 7e-13
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 4/77 (5%)

Query: 41  ADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDARDFILKCLQV 96
           +D+WS+G T +E+     P   +    ALFKI R   P +  P++ S+   DFI +CL  
Sbjct: 199 SDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIK 258

Query: 97  NPNDRPTAAQLMEHPFV 113
           N   RP   +L+EHPF+
Sbjct: 259 NYEQRPFMEELLEHPFI 275

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 62.7 bits (153), Expect = 8e-13
 Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 6/87 (6%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFG-VEWALF-KIARGELPPIPD-SVSRDARDFI 90
             G+    D WS+GC + E L    P+ G     +F  I  G++    D  VS +A D I
Sbjct: 175 GQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLI 234

Query: 91  LKCLQVNPNDRPTAA---QLMEHPFVK 114
            K L  +P  R  A    ++  HPF K
Sbjct: 235 SKLLVPDPEKRLGAKSIEEIKNHPFFK 261

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 62.8 bits (153), Expect = 1e-12
 Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 6/94 (6%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI---PDSVSRDARDFIL 91
           YG   DIWS+G  V+EM+    PYF      A+ +I R  LPP       VS   R F+ 
Sbjct: 192 YGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRI-RDNLPPKLKNLHKVSPRLRSFLD 250

Query: 92  KCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPT 125
           + L  +P  R TAA+L+ HPF+ +  P S  +P 
Sbjct: 251 RMLVRDPAQRATAAELLNHPFLAKAGPPSSIVPL 284

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 62.3 bits (151), Expect = 1e-12
 Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 4/86 (4%)

Query: 32  SKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDAR 87
           SK+  Y   AD+WS+G T++EM     P+  +     L KIA+ E P +  P   S + +
Sbjct: 180 SKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFK 239

Query: 88  DFILKCLQVNPNDRPTAAQLMEHPFV 113
           DF+ KCL+ N + R T  QL++HPFV
Sbjct: 240 DFLKKCLEKNVDARWTTTQLLQHPFV 265

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 62.8 bits (151), Expect = 1e-12
 Identities = 23/104 (22%), Positives = 42/104 (40%), Gaps = 14/104 (13%)

Query: 27  DQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG-----VEWALFKIARGELPP---- 77
           + ++          +DIWS+G T+ E+LT   P+ G           KI      P    
Sbjct: 178 EVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLAS 237

Query: 78  -----IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP 116
                 P+ +S+ A D + K L  +P +R +++  + H  +   
Sbjct: 238 PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHL 281

Length = 384

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 61.8 bits (150), Expect = 2e-12
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 2/79 (2%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWA--LFKIARGELPPIPDSVSRDARDFILKCL 94
           Y   +DIW++GC + E+ +  R +        + KI  G   PI D  S D R  IL  L
Sbjct: 178 YNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDRYSPDLRQLILSML 237

Query: 95  QVNPNDRPTAAQLMEHPFV 113
            ++P+ RP  +Q+M  P  
Sbjct: 238 NLDPSKRPQLSQIMAQPIC 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 61.6 bits (150), Expect = 2e-12
 Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 7/84 (8%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWA--LFKIARGELPPIPDSV-----SRDARD 88
           GY   ADIWS G T +E+ T   PY        L    + + P +         S+  R 
Sbjct: 183 GYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRK 242

Query: 89  FILKCLQVNPNDRPTAAQLMEHPF 112
            I  CLQ +P+ RPTA +L++H F
Sbjct: 243 MISLCLQKDPSKRPTAEELLKHKF 266

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 61.7 bits (150), Expect = 2e-12
 Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 10/96 (10%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA---LFKIARGEL---PPIPDS 81
           +V+   +GG+    D WS+G    E+LT   P F V+       +I+R  L   PP P +
Sbjct: 176 EVIRGGSGGHDKAVDWWSLGVLTFELLTGASP-FTVDGEQNSQSEISRRILKSKPPFPKT 234

Query: 82  VSRDARDFILKCLQVNPNDR---PTAAQLMEHPFVK 114
           +S +ARDFI K L+ +P  R     A ++  HPF +
Sbjct: 235 MSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQ 270

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 61.5 bits (149), Expect = 2e-12
 Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 2/83 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRDARDFI 90
           +N  Y    DIWS+GC + E+ T   P+ G  +   + KI +G   PI  + SRD R  I
Sbjct: 175 QNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPISPNFSRDLRSLI 234

Query: 91  LKCLQVNPNDRPTAAQLMEHPFV 113
            +  +V+P DRP+   +++ PF+
Sbjct: 235 SQLFKVSPRDRPSITSILKRPFL 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 61.3 bits (149), Expect = 3e-12
 Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF----KIARGELPPIP-DSVSRDARDFI 90
           GY   +DIWS+GC + EM     P++G +  L+    KI + + PP+P D  S + RD +
Sbjct: 182 GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLV 241

Query: 91  LKCLQVNPNDRPTAAQLME 109
            +C+  +P  RP  + +++
Sbjct: 242 SRCINPDPEKRPDISYVLQ 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 61.4 bits (149), Expect = 3e-12
 Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 4/78 (5%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGV--EWALF-KIARGELPPIPDSVSRDARDFILKC 93
           Y   +D+W++G  + E  T   P F    + AL  KI RG  PP+    S+     I +C
Sbjct: 178 YNEKSDVWALGVVLYECCTGKHP-FDANNQGALILKIIRGVFPPVSQMYSQQLAQLIDQC 236

Query: 94  LQVNPNDRPTAAQLMEHP 111
           L  +   RP   QL+ +P
Sbjct: 237 LTKDYRQRPDTFQLLRNP 254

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 61.6 bits (149), Expect = 3e-12
 Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 3/89 (3%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDA-RDFIL 91
           G Y    D+WS+G T +E+  R  P F +    AL+ IA+ E P +  +   D  R+F+ 
Sbjct: 199 GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVD 258

Query: 92  KCLQVNPNDRPTAAQLMEHPFVKRPLPTS 120
            CLQ  P DRPT+ +L++H FV R  P +
Sbjct: 259 SCLQKIPQDRPTSEELLKHMFVLRERPET 287

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 60.4 bits (146), Expect = 7e-12
 Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 3/87 (3%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDA-RDFIL 91
           G Y    D+WS+G T +E+  R  P F +    AL+ IA+ + P +  +   D+ R F+ 
Sbjct: 195 GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVD 254

Query: 92  KCLQVNPNDRPTAAQLMEHPFVKRPLP 118
            CLQ  P +RP +A+L+ H FV+R  P
Sbjct: 255 YCLQKIPQERPASAELLRHDFVRRDRP 281

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 60.2 bits (147), Expect = 7e-12
 Identities = 30/110 (27%), Positives = 42/110 (38%), Gaps = 38/110 (34%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWA------LFKIAR-------------GELP- 76
           Y    DIWSVGC   EM+T  +P F           LFKI +              +LP 
Sbjct: 176 YSTAVDIWSVGCIFAEMITG-KPLF---PGDSEIDQLFKIFQILGTPTEESWPGVTKLPD 231

Query: 77  ---------PIPDS-----VSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
                    P         +  +  D + K LQ NP  R +A + ++HP+
Sbjct: 232 YKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPY 281

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 59.9 bits (146), Expect = 1e-11
 Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)

Query: 42  DIWSVGCTVLEMLTRC-RPYFGVEWA--LFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           D+WS G  + E+ T   +PY G+     L  +  G   P P +   +  D +L+C   +P
Sbjct: 185 DVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLPQPPNCPPELYDLMLQCWAEDP 244

Query: 99  NDRPTAAQLME 109
            DRPT ++L+E
Sbjct: 245 EDRPTFSELVE 255

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 59.4 bits (145), Expect = 1e-11
 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 3/81 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWA--LFKIARGELPPIPDSVSRDARDF 89
           K+G +   +D+WS G  + E+ T    PY G+     L  +  G   P P++   +  + 
Sbjct: 177 KDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELLEDGYRLPRPENCPDELYEL 236

Query: 90  ILKCLQVNPNDRPTAAQLMEH 110
           +L+C   +P DRPT ++L+E 
Sbjct: 237 MLQCWAYDPEDRPTFSELVED 257

Length = 258

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 59.4 bits (144), Expect = 1e-11
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 2/78 (2%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWA--LFKIARGELPPIPDSVSRDARDFILKCL 94
           Y   +DIW++GC + E+LT  R +        + KI +G   P+    S +    +   L
Sbjct: 178 YNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVYSSELISLVHSLL 237

Query: 95  QVNPNDRPTAAQLMEHPF 112
           Q +P  RPTA ++++ P 
Sbjct: 238 QQDPEKRPTADEVLDQPL 255

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 59.4 bits (144), Expect = 1e-11
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 3/81 (3%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPD-SVSRDARDFILKC 93
           Y   ADIWS+G T+ EM T   PY  V+   A+  I + + P + D   S+  R+F+  C
Sbjct: 179 YDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFVAAC 238

Query: 94  LQVNPNDRPTAAQLMEHPFVK 114
           L   P +R +A +L++  ++K
Sbjct: 239 LDEEPKERLSAEELLKSKWIK 259

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 59.5 bits (144), Expect = 2e-11
 Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 6/97 (6%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVS 83
           +VV  K   YG   DIWS+G   +EM+    PY       AL+ IA    P +  P+ +S
Sbjct: 185 EVVTRKA--YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 242

Query: 84  RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 120
              RDF+ +CL+++   R +A +L++HPF+K   P S
Sbjct: 243 AIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKPLS 279

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 58.4 bits (142), Expect = 2e-11
 Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 30/82 (36%)

Query: 30  VNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDF 89
           V    G Y   +DIWS+G  + E+                               + +D 
Sbjct: 164 VLLGKGYYSEKSDIWSLGVILYEL------------------------------PELKDL 193

Query: 90  ILKCLQVNPNDRPTAAQLMEHP 111
           I K LQ +P  RP+A +++EH 
Sbjct: 194 IRKMLQKDPEKRPSAKEILEHL 215

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 59.1 bits (143), Expect = 2e-11
 Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 2/83 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRDARDFI 90
           +N  Y   +DIW++GC + EM T    +    ++  + KI RG  PP+    S D R+ +
Sbjct: 174 ENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSSHYSYDLRNLV 233

Query: 91  LKCLQVNPNDRPTAAQLMEHPFV 113
            +  + NP DRP+   ++E  F+
Sbjct: 234 SQLFKRNPRDRPSVNSILEKNFI 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 58.7 bits (143), Expect = 2e-11
 Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)

Query: 42  DIWSVGCTVLEMLTRC-RPYFGVEWA--LFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           D+WS G  + E+ T    PY G+  A  L  + +G   P P +   +    +L+C   +P
Sbjct: 186 DVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPKPPNCPPELYKLMLQCWAEDP 245

Query: 99  NDRPTAAQLME 109
            DRPT ++L+E
Sbjct: 246 EDRPTFSELVE 256

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 59.0 bits (143), Expect = 2e-11
 Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 13/95 (13%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPY-------FGVEWALFKIARGELPPIPD----- 80
           +   Y + +D+WS+G T+LE+     P+        G    L  I     P + D     
Sbjct: 176 QGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNG 235

Query: 81  -SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
              S + +DFI +CL+ +P  RPT   ++EHP++K
Sbjct: 236 IKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIK 270

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 59.0 bits (142), Expect = 3e-11
 Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 6/100 (6%)

Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PD 80
           +  +VV  K   YG   DIWS+G   +EM+    PY       AL+ IA    P +  P+
Sbjct: 182 MAPEVVTRK--AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPE 239

Query: 81  SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 120
            +S   RDF+ +CL+++   R +A +L++HPF+K   P S
Sbjct: 240 KLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPLS 279

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 58.3 bits (142), Expect = 3e-11
 Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 13/93 (13%)

Query: 21  RWN---SLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWALF--KIARGE 74
           RW    SL D +  SK+       D+WS G  + E+ T    PY G+        + +G 
Sbjct: 172 RWMAPESLKDGIFTSKS-------DVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGY 224

Query: 75  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQL 107
             P P+    +  + +L C Q++P DRPT ++L
Sbjct: 225 RLPKPEYCPDELYELMLSCWQLDPEDRPTFSEL 257

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 58.6 bits (141), Expect = 3e-11
 Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 6/100 (6%)

Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PD 80
           +  +VV  K   YG   DIWS+G   +EM+    PY       AL+ IA    P +  P+
Sbjct: 182 MAPEVVTRK--AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPE 239

Query: 81  SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 120
            +S   RDF+ +CL+++ + R +A +L++HPF+K   P S
Sbjct: 240 RLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLS 279

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 58.7 bits (143), Expect = 3e-11
 Identities = 36/114 (31%), Positives = 46/114 (40%), Gaps = 32/114 (28%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF----------------GV----EWALFK-----IA 71
           YG+  D+WSVGC   E+L R  P+                 G      W         + 
Sbjct: 180 YGVGVDMWSVGCIFAELLLR-VPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVE 238

Query: 72  RGELPPIP-----DSVSRDARDFILKCLQVNPNDRPTAAQLMEHP-FVKRPLPT 119
               PP P      + S DA D + + L +NPN R TA Q +EHP F   P PT
Sbjct: 239 FKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPT 292

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 58.5 bits (141), Expect = 4e-11
 Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 3/89 (3%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDA-RDFIL 91
           G Y    D+WS+G T +E+  R  P F +    AL+ IA+ E P +      +  R+F+ 
Sbjct: 189 GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVD 248

Query: 92  KCLQVNPNDRPTAAQLMEHPFVKRPLPTS 120
            CLQ  P DRPT+  L++H FV R  P +
Sbjct: 249 SCLQKIPQDRPTSEVLLKHRFVLRERPPT 277

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 58.2 bits (141), Expect = 4e-11
 Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 34/109 (31%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW---ALFKIAR--GELPP-------------- 77
           YG   DIW+VGC V EMLT   P F  +     L+ I +  G L P              
Sbjct: 178 YGRAVDIWAVGCLVTEMLTG-EPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAG 236

Query: 78  --IPD------------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
             +P+             +S    D   +CL+++P+DRP+++QL+ H F
Sbjct: 237 MRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEF 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 57.0 bits (137), Expect = 1e-10
 Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 2/85 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFI 90
           K   Y   ADIWS+G T +E+     P   +     LF I +   P +    S+  ++F+
Sbjct: 174 KQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFV 233

Query: 91  LKCLQVNPNDRPTAAQLMEHPFVKR 115
             CL  +P  RPTA +L++H F+ R
Sbjct: 234 EACLNKDPRFRPTAKELLKHKFITR 258

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 56.6 bits (137), Expect = 2e-10
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 37/115 (32%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF---KIARGELP---------------- 76
           GY   +DI+SVG T  E+     P+  +        K+ RG +P                
Sbjct: 186 GYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKV-RGTVPCLLDKSTYPLYEDSMS 244

Query: 77  ----PIPDSVSRDARD-------------FILKCLQVNPNDRPTAAQLMEHPFVK 114
                     +RD+ D             F+  CLQ +P  RP+A+QL+ H F K
Sbjct: 245 QSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFK 299

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 55.7 bits (134), Expect = 3e-10
 Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 2/83 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFI 90
           K+ GY   +DIWS+GC + EM      + G  +   + +I  G  P +P++ SR     +
Sbjct: 178 KHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNSIM 237

Query: 91  LKCLQVNPNDRPTAAQLMEHPFV 113
              L  +P+ RP+AA+++ +PF+
Sbjct: 238 QSMLNKDPSLRPSAAEILRNPFI 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 56.0 bits (136), Expect = 3e-10
 Identities = 28/107 (26%), Positives = 40/107 (37%), Gaps = 34/107 (31%)

Query: 42  DIWSVGCTVLEMLTRCRPYF-----------------------------GVEWALF-KIA 71
           D+WSVGC + EML   +P F                                  +   + 
Sbjct: 195 DMWSVGCILGEML-LGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLP 253

Query: 72  RGELPPIPD---SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
                P+ +     S DA D + K L  NPN R TA + +EHP+V +
Sbjct: 254 SRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ 300

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 55.8 bits (135), Expect = 3e-10
 Identities = 39/126 (30%), Positives = 52/126 (41%), Gaps = 35/126 (27%)

Query: 19  VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEW--ALFKI----- 70
           V+RW    + ++  K  GY  P DIWSVGC   E+L+R RP F G      LFKI     
Sbjct: 160 VTRWYRAPELLLGDK--GYSTPVDIWSVGCIFAELLSR-RPLFPGKSEIDQLFKIFRTLG 216

Query: 71  -------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRPTAAQ 106
                        AR      P            + S  A D + + L  +P+ R TA Q
Sbjct: 217 TPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQ 276

Query: 107 LMEHPF 112
            + HP+
Sbjct: 277 ALAHPY 282

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 55.2 bits (133), Expect = 5e-10
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 3/73 (4%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF--KIARGELPPIPDSV-SRDARDF 89
           KN  YG  AD+W+ GC + +M T   P++         KI      P+P+ + S D  D 
Sbjct: 186 KNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGMYSEDVTDV 245

Query: 90  ILKCLQVNPNDRP 102
           I  CL  +   RP
Sbjct: 246 ITSCLTPDAEARP 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 55.0 bits (133), Expect = 6e-10
 Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 37/128 (28%)

Query: 19  VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW---ALFKIAR--G 73
            +RW    + +V   N  YG P D+W++GC + E+L    P F  +     L+ I +  G
Sbjct: 163 ATRWYRAPELLVGDTN--YGKPVDVWAIGCIMAELLDG-EPLFPGDSDIDQLYLIQKCLG 219

Query: 74  ELPP----------------IPD-------------SVSRDARDFILKCLQVNPNDRPTA 104
            LPP                 P+              VS  A DF+  CL+++P +R T 
Sbjct: 220 PLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTC 279

Query: 105 AQLMEHPF 112
            +L++HP+
Sbjct: 280 DELLQHPY 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 54.6 bits (131), Expect = 8e-10
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 5/72 (6%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF----KIARGELPPIP-DSVSRDARDFI 90
           GY   +DIWS+GC + EM     P++G +  LF    KI + + PP+P +  S   R+ +
Sbjct: 182 GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELV 241

Query: 91  LKCLQVNPNDRP 102
             C+  +P+ RP
Sbjct: 242 SMCIYPDPDQRP 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 54.7 bits (131), Expect = 9e-10
 Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 6/100 (6%)

Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PD 80
           +  +VV  K   YG   DIWS+G   +EM+    PY       AL+ IA    P +  P+
Sbjct: 183 MAPEVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPE 240

Query: 81  SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 120
            +S   RDF+ +CL ++   R +A +L++H F+K   P S
Sbjct: 241 KLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLS 280

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 54.3 bits (131), Expect = 9e-10
 Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 34/109 (31%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFG---VEWALFKIAR--GELPP-------------- 77
           YG P D+W++GC   E+LT    + G   V+  L+ I +  G+L P              
Sbjct: 178 YGPPVDVWAIGCVFAELLTGQPLWPGKSDVD-QLYLIRKTLGDLIPRHQQIFSTNQFFKG 236

Query: 78  --IPD------------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
             IP+            ++S  A  F+  CLQ++P +R +  +L+EHP+
Sbjct: 237 LSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPY 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 54.5 bits (132), Expect = 1e-09
 Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 33/108 (30%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF--------------------------GVEWAL--- 67
           Y  P DIW++GC + E+ T  RP F                          G + A    
Sbjct: 176 YSSPVDIWALGCIMAELYT-LRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLG 234

Query: 68  FKIARGELPPIPD---SVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
           F+  +     +     + S +A D I   L+ +P  RPTA+Q ++HP+
Sbjct: 235 FRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPY 282

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 53.9 bits (129), Expect = 1e-09
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 5/72 (6%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF----KIARGELPPIP-DSVSRDARDFI 90
           GY   +DIWS+GC + EM     P++G +  L+    KI + + PP+P D  S + R  +
Sbjct: 182 GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLV 241

Query: 91  LKCLQVNPNDRP 102
             C+  +P  RP
Sbjct: 242 NMCINPDPEKRP 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 53.5 bits (128), Expect = 2e-09
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFI 90
           K   Y   ADIWS+G T +E+     P+  +     LF I +   P +  + S+  ++F+
Sbjct: 174 KQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFV 233

Query: 91  LKCLQVNPNDRPTAAQLMEHPFVKR 115
             CL   P+ RPTA +L++H F+ R
Sbjct: 234 EACLNKEPSFRPTAKELLKHKFIVR 258

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 53.4 bits (128), Expect = 2e-09
 Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFIL 91
           N  Y   +D+W++GC V EM T    +   +    +++I  G+LPP+P   S +  + I 
Sbjct: 176 NKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELGELIA 235

Query: 92  KCLQVNPNDRPTAAQLMEHPFV 113
             L   P  RP+   ++  P++
Sbjct: 236 TMLSKRPEKRPSVKSILRQPYI 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 53.6 bits (129), Expect = 2e-09
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 7/84 (8%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFG-VEWALF-KIARGEL--PPIPDSVSRDARDFIL 91
           GYG P D W++G  + E L  C P+FG     LF ++   ++  P   +++  DA+D I 
Sbjct: 192 GYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLIS 251

Query: 92  KCLQVNPNDR---PTAAQLMEHPF 112
           + L+ NP +R     A ++ +H F
Sbjct: 252 RLLRQNPLERLGTGGAFEVKQHRF 275

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 52.7 bits (126), Expect = 4e-09
 Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 6/98 (6%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP-IPDS--VSRDARDFIL 91
           YG   DIWS+G  V+EM+    PYF      A+ +I R  LPP + DS  VS   R F+ 
Sbjct: 195 YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRI-RDNLPPRVKDSHKVSSVLRGFLD 253

Query: 92  KCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHHF 129
             L   P+ R TA +L++HPF+K   P S  +P    +
Sbjct: 254 LMLVREPSQRATAQELLQHPFLKLAGPPSCIVPLMRQY 291

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 52.3 bits (125), Expect = 5e-09
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 4/81 (4%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFG-VEWALFKIARGELPPIPDSVSRDA---RDFILK 92
           YG   DIWS+G  V+EM+    PYF        K  R   PP   +  + +   RDF+ +
Sbjct: 194 YGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLER 253

Query: 93  CLQVNPNDRPTAAQLMEHPFV 113
            L   P +R TA +L++HPF+
Sbjct: 254 MLTREPQERATAQELLDHPFL 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 52.3 bits (125), Expect = 5e-09
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 4/92 (4%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFG-VEWALFKIARGELPPIPDS---VSRDARDFILK 92
           YG   DIWS+G  V+EM+    PYF        K+ R  LPP   +   VS   + F+ +
Sbjct: 193 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDR 252

Query: 93  CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 124
            L  +P  R TAA+L++HPF+ +  P S  +P
Sbjct: 253 LLVRDPAQRATAAELLKHPFLAKAGPPSCIVP 284

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 51.6 bits (123), Expect = 9e-09
 Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 6/86 (6%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL--PPIPDSV--SRDA 86
           + GGY    DIW+VG T +E+     P F +    ALF + +     P + D +  S   
Sbjct: 182 RKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSF 241

Query: 87  RDFILKCLQVNPNDRPTAAQLMEHPF 112
             F+   L  NP  RPTA +L++HPF
Sbjct: 242 HHFVKMALTKNPKKRPTAEKLLQHPF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 51.8 bits (124), Expect = 1e-08
 Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 2/80 (2%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRDARDFILKCL 94
           Y   AD++S+G  + E+LT  RP+ G  +E  + K   G   P+P S+S + ++ +   L
Sbjct: 222 YSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPPSISPEMQEIVTALL 281

Query: 95  QVNPNDRPTAAQLMEHPFVK 114
             +P  RP++++L+  P  K
Sbjct: 282 SSDPKRRPSSSKLLNMPICK 301

Length = 496

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 51.6 bits (123), Expect = 1e-08
 Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 3/92 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFI 90
           +   Y   ADIWS+G T +E+     P   +     LF I +   P +    S+  ++FI
Sbjct: 174 QQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFI 233

Query: 91  LKCLQVNPNDRPTAAQLMEHPF-VKRPLPTSW 121
             CL  +P+ RPTA +L++H F VK    TS+
Sbjct: 234 DACLNKDPSFRPTAKELLKHKFIVKNAKKTSY 265

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 51.1 bits (122), Expect = 1e-08
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA--LFKIARGELPPIPDSVSRDARDFI 90
           +N  Y   +DIWS+GC + E+ T   P+    W   + K+ +G   P+P   S + R  I
Sbjct: 173 ENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPSHYSYELRSLI 232

Query: 91  LKCLQVNPNDRPTAAQLM 108
            +  + NP  RP+A  ++
Sbjct: 233 KQMFKRNPRSRPSATTIL 250

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 51.3 bits (123), Expect = 1e-08
 Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 23/114 (20%)

Query: 23  NSLTDQVVNS---------KNGGYGLPADIWSVGCTVLEMLTRCRPY------------- 60
           NS+ D  V +         + G Y + +D+WS+G +++E+     P+             
Sbjct: 156 NSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDP 215

Query: 61  FGVEWALFKIARGELPPIPDS-VSRDARDFILKCLQVNPNDRPTAAQLMEHPFV 113
            G+   L +I +   P +P S    D RDF+  CL  +P +RPT  QL   P  
Sbjct: 216 MGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPF 269

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 51.0 bits (122), Expect = 1e-08
 Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 10/87 (11%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPY--------FGVEWALFKIARGELPPI-PDS-VSRDA 86
           YG+ +D+WS+G + +E+     PY          +   L +    E PP+ P    S   
Sbjct: 170 YGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKF 229

Query: 87  RDFILKCLQVNPNDRPTAAQLMEHPFV 113
             FI +C++  P +RP    LM+HPF+
Sbjct: 230 VHFITQCMRKQPKERPAPENLMDHPFI 256

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 50.8 bits (121), Expect = 2e-08
 Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDARDFILK 92
           Y    D+WS+G T +E+     P F +     LFKI R   P +  P+   R    FI +
Sbjct: 210 YDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQ 269

Query: 93  CLQVNPNDRPTAAQLMEHPFVK 114
           CL  +   RP+   L+EHPF+K
Sbjct: 270 CLIKDFEARPSVTHLLEHPFIK 291

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 50.2 bits (121), Expect = 3e-08
 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 8/84 (9%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALF-KIARGELPPIPDSVSRDARDFILKC 93
           GYG   D W++G  + EML    P+F      ++ KI  G++   P   S DA+D I   
Sbjct: 174 GYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKV-RFPSFFSPDAKDLIRNL 232

Query: 94  LQVNP-----NDRPTAAQLMEHPF 112
           LQV+      N +     +  HP+
Sbjct: 233 LQVDLTKRLGNLKNGVNDIKNHPW 256

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 50.1 bits (119), Expect = 3e-08
 Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 3/80 (3%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV-SRDARDFILKC 93
           Y   +D+WS+G T +EM     P   +    ALF I R   P +     S+  + FI  C
Sbjct: 193 YDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESC 252

Query: 94  LQVNPNDRPTAAQLMEHPFV 113
           L  N + RPT  QLM+HPF+
Sbjct: 253 LVKNHSQRPTTEQLMKHPFI 272

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 49.6 bits (119), Expect = 4e-08
 Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 32/107 (29%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW---ALFKI----------------------- 70
           Y  P DIWS+GC   EM+ R RP F  +     LF+I                       
Sbjct: 177 YSTPVDIWSIGCIFAEMVNR-RPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKP 235

Query: 71  -----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
                AR +L  +  ++  D  D + K L  +P  R +A   ++HP+
Sbjct: 236 TFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPY 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 49.3 bits (117), Expect = 5e-08
 Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 6/86 (6%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL--PPIPDSV--SRDA 86
           KNGGY    DIW+VG T +E+     P F +    ALF +++     P + D    S   
Sbjct: 182 KNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTF 241

Query: 87  RDFILKCLQVNPNDRPTAAQLMEHPF 112
            +F+   L  NP  RPTA +L+ H F
Sbjct: 242 HNFVKISLTKNPKKRPTAERLLTHLF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 49.3 bits (118), Expect = 7e-08
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 13/90 (14%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEW-----ALFKIARGELPPI--PDS---VSRD 85
           GY + +D+WS+G T+ E+ T   PY   +W      L ++ +G+ PPI         S  
Sbjct: 186 GYDVRSDVWSLGITLYEVATGKFPY--PKWNSVFDQLTQVVKGD-PPILSNSEEREFSPS 242

Query: 86  ARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
             +FI  CL  + + RP   +L+EHPF+K 
Sbjct: 243 FVNFINLCLIKDESKRPKYKELLEHPFIKD 272

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 49.2 bits (118), Expect = 7e-08
 Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 36/127 (28%)

Query: 20  SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVE-----WALFKI--- 70
           +RW    + ++NSK  GY    DIWSVGC + EML+  RP F G +       +  +   
Sbjct: 172 TRWYRAPEIMLNSK--GYTKAIDIWSVGCILAEMLS-NRPLFPGKDYLHQLNLILGVLGT 228

Query: 71  -------------ARGEL------PPIPDS-----VSRDARDFILKCLQVNPNDRPTAAQ 106
                        AR  +      P +P +         A D + K L  NP+ R T  +
Sbjct: 229 PSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEE 288

Query: 107 LMEHPFV 113
            + HP++
Sbjct: 289 ALAHPYL 295

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 49.2 bits (118), Expect = 7e-08
 Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 30/105 (28%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF--------------------GVEW----ALFKIAR 72
           Y  P D+WSVGC   E+  R RP F                      EW    +L + + 
Sbjct: 183 YATPVDMWSVGCIFAELFRR-RPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSF 241

Query: 73  GELPPIP-----DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
               P         +  +  D + K L  NP+ R +A + ++HP+
Sbjct: 242 PSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPY 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 49.0 bits (117), Expect = 7e-08
 Identities = 31/118 (26%), Positives = 48/118 (40%), Gaps = 39/118 (33%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRP-----------YFGVE--------------------- 64
           Y + +DIWS+G +++EM     P            FG                       
Sbjct: 175 YTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSP 234

Query: 65  --WALFK----IARGELPPIPDSV-SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
              A+F+    I     P +P    S + +DF+ KCL+ NP +R    +L +HPF+KR
Sbjct: 235 RPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKR 292

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 48.9 bits (116), Expect = 1e-07
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 2/80 (2%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCL 94
           Y   AD+WS+G  + E+LT  RP+ G      + ++  G+  P P  VS   +  +   L
Sbjct: 248 YSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFPCPVSSGMKALLDPLL 307

Query: 95  QVNPNDRPTAAQLMEHPFVK 114
             NP  RPT  QL+   F+K
Sbjct: 308 SKNPALRPTTQQLLHTEFLK 327

Length = 478

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 48.1 bits (115), Expect = 1e-07
 Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 12/86 (13%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFG-----VEW--ALFKIARGELPPIPDSVSRDARD 88
           GY +  D WS+G T  E L   RPY G      +   A  + A       P + S +A D
Sbjct: 175 GYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETAD---VLYPATWSTEAID 231

Query: 89  FILKCLQVNPNDR--PTAAQLMEHPF 112
            I K L+ +P  R       L  HP+
Sbjct: 232 AINKLLERDPQKRLGDNLKDLKNHPY 257

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 48.4 bits (116), Expect = 1e-07
 Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 11/87 (12%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGE----LPPIPDSVSRDARD 88
            YGL  D WS+G  + EML    P++     E    KI   +     PP P  VS +A D
Sbjct: 206 PYGLECDWWSLGVILYEMLYGFPPFYSDTLQETY-NKIINWKESLRFPPDPP-VSPEAID 263

Query: 89  FILKCLQVNPNDRPTAA-QLMEHPFVK 114
            I + L  +P DR  +  ++  HPF K
Sbjct: 264 LICRLLC-DPEDRLGSFEEIKSHPFFK 289

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 47.9 bits (114), Expect = 2e-07
 Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 8/86 (9%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRDARDFILKC 93
           G+G   D WS+G  + +MLT   P+     +  + KI +G+L  +P  ++ +ARD + K 
Sbjct: 176 GHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLN-LPPYLTPEARDLLKKL 234

Query: 94  LQVNPNDR-----PTAAQLMEHPFVK 114
           L+ NP+ R       AA++  HPF +
Sbjct: 235 LKRNPSSRLGAGPGDAAEVQSHPFFR 260

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 47.3 bits (112), Expect = 4e-07
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 12/85 (14%)

Query: 37  YGLPADIWSVGCTVLEM------LTRCRPYFGVEWALFKIARGELPPI--PDSVSRDARD 88
           Y    D+WS+G T +E+      L    P      ALFKI R   P +  P+  S +  D
Sbjct: 206 YDARCDVWSLGITAIELGDGDPPLADLHPM----RALFKIPRNPPPTLHQPELWSNEFND 261

Query: 89  FILKCLQVNPNDRPTAAQLMEHPFV 113
           FI KCL  +   RPT + L++H F+
Sbjct: 262 FIRKCLTKDYEKRPTVSDLLQHVFI 286

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 45.8 bits (108), Expect = 1e-06
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 10/101 (9%)

Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF--GVEWALFKIARGEL---PPIP 79
           +   +V   +GG+    D WS+G  + E+LT   P+   G + +  +I+R  L   PP P
Sbjct: 173 MAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYP 232

Query: 80  DSVSRDARDFILKCLQVNPNDR----PTAAQ-LMEHPFVKR 115
             +S  A+D I + L  +P  R    P+ A  + +HPF ++
Sbjct: 233 QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQK 273

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 45.5 bits (108), Expect = 1e-06
 Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 4/72 (5%)

Query: 42  DIWSVGCTVLEMLTRCR-PYFGVEWA--LFKI-ARGELPPIPDSVSRDARDFILKCLQVN 97
           D+W  G T+ EM T    P+ G+  +  L KI   GE    P++  +D  + +L+C   N
Sbjct: 182 DVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHN 241

Query: 98  PNDRPTAAQLME 109
           P DRPT A L E
Sbjct: 242 PADRPTFAALRE 253

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 45.3 bits (107), Expect = 2e-06
 Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 6/85 (7%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRDARDFILKC 93
           GY    D WS+G  V EM     P++    +     IA G++    + +S + R F+   
Sbjct: 173 GYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGL 232

Query: 94  LQVNPNDR----PTAAQLMEHPFVK 114
           L  NP  R      A +L EHPF  
Sbjct: 233 LNRNPQHRLGAHRDAVELKEHPFFA 257

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 45.2 bits (107), Expect = 2e-06
 Identities = 29/107 (27%), Positives = 41/107 (38%), Gaps = 32/107 (29%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW---ALFKI----------------------- 70
           Y    DIWS+GC   EM+TR R  F  +     LF+I                       
Sbjct: 178 YSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKP 236

Query: 71  -----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
                AR +   +   +  D RD + + L  +PN R +A   + HPF
Sbjct: 237 SFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPF 283

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 45.2 bits (107), Expect = 2e-06
 Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 18/94 (19%)

Query: 24  SLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWA-----LFKIARGELPP 77
           SL D+V  SK       +D+W+ G T+ E+ TR + PY GVE       L    R + P 
Sbjct: 186 SLADRVYTSK-------SDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPE 238

Query: 78  -IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 110
              D +     D +  C + +P DRPT  +L E 
Sbjct: 239 DCLDEL----YDLMYSCWRADPKDRPTFTKLREV 268

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 24/113 (21%), Positives = 38/113 (33%), Gaps = 42/113 (37%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-------------------------GVE----WAL 67
           YG   D+WSVGC + E+    +P F                         GV     +  
Sbjct: 179 YGPEVDMWSVGCILAELFLG-KPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFEN 237

Query: 68  FKIARGELPPIPDSV--------SRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
            K  +    P    +           A D + K L ++P  R +A Q ++H +
Sbjct: 238 LKPKK----PYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEY 286

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 45.0 bits (107), Expect = 2e-06
 Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 32/110 (29%)

Query: 34  NGGYGLPADIWSVGCTVLEMLT------------------------------RCRPYFGV 63
           +G YG   DIW+VGC   E+L+                              + R    +
Sbjct: 173 DGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHM 232

Query: 64  EWAL-FKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
            +    K   G    +P+  S +  D + K L  +P++R TA Q + HP+
Sbjct: 233 NYNFPSKKGTGLRKLLPN-ASAEGLDLLKKLLAYDPDERITAKQALRHPY 281

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 45.0 bits (106), Expect = 2e-06
 Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 5/88 (5%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGV-EWALFKIARGELPPIPDSVSRDARDFILKCLQ 95
           Y    D WS G  + EML    P+ G  E  LF+  R + P  P  ++R+A+D ++K   
Sbjct: 173 YNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPRWLTREAKDILVKLFV 232

Query: 96  VNPNDR-PTAAQLMEHPFVKRPLPTSWG 122
             P  R      + +HPF +      W 
Sbjct: 233 REPERRLGVKGDIRQHPFFRE---IDWS 257

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 45.0 bits (106), Expect = 2e-06
 Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 3/80 (3%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV-SRDARDFILKC 93
           Y   +DIWS+G T +EM     P   +    ALF I R   P +     S+   DFI  C
Sbjct: 203 YDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGC 262

Query: 94  LQVNPNDRPTAAQLMEHPFV 113
           L  N   RP+  QL++HPF+
Sbjct: 263 LVKNYLSRPSTEQLLKHPFI 282

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 44.6 bits (105), Expect = 3e-06
 Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 11/97 (11%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF--GVEWALFKIARGEL---PPIPDSV 82
           +++  K GG+G   D WS+G  + E+LT   P+   G      +++R  L   PP P  +
Sbjct: 176 EIIRGK-GGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFI 234

Query: 83  SRDARDFILKCLQVNPNDR-----PTAAQLMEHPFVK 114
             +A+D + K L+ +P  R       A+++ EHPF K
Sbjct: 235 GPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFK 271

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 44.1 bits (105), Expect = 4e-06
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPI-----PDSVSRDARD 88
           N GY    D WS+G  + E+LT   P+   +    +I    L        P+ + + A+D
Sbjct: 166 NKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKD 225

Query: 89  FILKCLQVNPNDR 101
            I + L+ NP +R
Sbjct: 226 LIKQLLRRNPEER 238

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 44.2 bits (105), Expect = 4e-06
 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 7/86 (8%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELP-PIPDSVSRDARDFILK 92
           G+G   D W++G  + EML    P+ G   +     I + E+  P    VS  ARD I K
Sbjct: 208 GHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRK 267

Query: 93  CLQVNPNDR----PTAAQLMEHPFVK 114
            L  +P+ R      AA++ +HPF +
Sbjct: 268 LLVKDPSKRLGSKRGAAEIKQHPFFR 293

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 44.2 bits (105), Expect = 4e-06
 Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 34/114 (29%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI------------------------ 70
             Y    D+WSVGC   EML R R  F  +  + ++                        
Sbjct: 187 PEYTTAIDMWSVGCIFAEMLGR-RQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVR 245

Query: 71  ----ARGELPPIPDSV-----SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
                     P+P S      S +A D + + LQ +P +R T  Q ++HPF+ +
Sbjct: 246 KYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQ 299

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 43.8 bits (104), Expect = 5e-06
 Identities = 28/126 (22%), Positives = 45/126 (35%), Gaps = 35/126 (27%)

Query: 19  VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF----------------G 62
           V+RW    + ++  +   Y    DIW +GC   EM TR RP                  G
Sbjct: 188 VTRWYRPPELLLGERR--YTTAVDIWGIGCVFAEMFTR-RPILQGKSDIDQLHLIFKLCG 244

Query: 63  V----EWALF--------KIARGELPPIPD----SVSRDARDFILKCLQVNPNDRPTAAQ 106
                 W  +          +    P   +     +  +  D + K L ++P  R TA+ 
Sbjct: 245 TPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASD 304

Query: 107 LMEHPF 112
            +EHP+
Sbjct: 305 ALEHPY 310

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 43.6 bits (103), Expect = 5e-06
 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 8/81 (9%)

Query: 42  DIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGEL---PPIPDSVSRDARDFILKCLQV 96
           D WS+GC + E L    P+     +     I    +     + +  S +A D I + L +
Sbjct: 175 DWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCM 234

Query: 97  NPNDRPTA---AQLMEHPFVK 114
           +P  R  A    ++  HPF K
Sbjct: 235 DPAKRLGANGYQEIKSHPFFK 255

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 43.6 bits (103), Expect = 6e-06
 Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 5/89 (5%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGV-EWALFKIARGELPPIPDSVSRDARDFILKCLQ 95
           Y    D WS G  + EML    P+ G  E  LF     + P  P  +S++A+D + K  +
Sbjct: 173 YNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPRWISKEAKDCLSKLFE 232

Query: 96  VNPNDR-PTAAQLMEHPFVKRPLPTSWGL 123
            +P  R      + +HPF +      W  
Sbjct: 233 RDPTKRLGVDGDIRQHPFFR---GIDWER 258

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 3/69 (4%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGVEWA--LFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           D+WS G T+ E  +   +PY  ++ A  +  +  GE  P P+   ++    +L C +  P
Sbjct: 180 DVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEECPQEIYSIMLSCWKYRP 239

Query: 99  NDRPTAAQL 107
            DRPT ++L
Sbjct: 240 EDRPTFSEL 248

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 42.3 bits (99), Expect = 2e-05
 Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 3/72 (4%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWA--LFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  ++E++T  R PY G+     +  + RG   P P++   +  + ++
Sbjct: 178 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMM 237

Query: 92  KCLQVNPNDRPT 103
           +C +  P +RPT
Sbjct: 238 RCWKNRPEERPT 249

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 41.8 bits (98), Expect = 2e-05
 Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 17/86 (19%)

Query: 41  ADIWSVGCTVLEMLTRCRPY----------FGVEWALFKIA-------RGELPPIPDSVS 83
           +D+WS G T+ E+LT C              G +     +        RG   P P +  
Sbjct: 191 SDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCP 250

Query: 84  RDARDFILKCLQVNPNDRPTAAQLME 109
           ++    +  C +     RPT   L+ 
Sbjct: 251 QEVYILMKNCWETEAKFRPTFRSLIP 276

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 41.8 bits (98), Expect = 2e-05
 Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 34/126 (26%)

Query: 19  VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-----RCRPYF------------ 61
           V+RW    + ++N  +  Y    DIWSVGC + EMLT     + + Y             
Sbjct: 176 VTRWYRAPEVILNWMH--YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGV 233

Query: 62  -GVEW--------------ALFKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQ 106
            G E+              +L K  R +   +    S  A D + K L+++ + R TA +
Sbjct: 234 PGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATE 293

Query: 107 LMEHPF 112
            +EHP+
Sbjct: 294 ALEHPY 299

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 41.7 bits (98), Expect = 3e-05
 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 16/95 (16%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELP--------PIPDSVSR 84
           +   Y    D +++GCT+ EM+    P+   +    K+ + EL           PD  S 
Sbjct: 167 QGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKE---KVEKEELKRRTLEMAVEYPDKFSP 223

Query: 85  DARDFILKCLQVNPNDR-----PTAAQLMEHPFVK 114
           +A+D     LQ +P  R      +A ++ EHP  K
Sbjct: 224 EAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFK 258

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 41.9 bits (98), Expect = 3e-05
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 2/80 (2%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFG-VEWALFKIARGELPPIPDSVSRDARDFILKCLQ 95
           Y    D WS G  + EML    P+ G  E  LF+  R + P  P  ++++++D + K  +
Sbjct: 173 YTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLFE 232

Query: 96  VNPNDR-PTAAQLMEHPFVK 114
            +P  R      +  HPF K
Sbjct: 233 RDPTRRLGVVGNIRGHPFFK 252

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 41.5 bits (98), Expect = 3e-05
 Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 34/107 (31%)

Query: 41  ADIWSVGCTVLEMLTRCRPYF----------------GV--EWALFKI----ARG---EL 75
            DIWSVGC + E+LT  +  F                G   E  L KI    AR     L
Sbjct: 197 VDIWSVGCIMAELLTG-KTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSL 255

Query: 76  PPIPDS--------VSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
           P +P           +  A D + K L ++P+ R TAA+ + HP++ 
Sbjct: 256 PQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLA 302

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 41.6 bits (98), Expect = 3e-05
 Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 17/85 (20%)

Query: 42  DIWSVGCTVLEMLTRCRP----------YFGVEWALFKIAR-------GELPPIPDSVSR 84
           D+WS G T+ E+ T   P            G+      + R       GE  P P S   
Sbjct: 194 DVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPD 253

Query: 85  DARDFILKCLQVNPNDRPTAAQLME 109
           +  D +  C +  P DRP+ A L+ 
Sbjct: 254 EVYDLMKLCWEAEPQDRPSFADLIL 278

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 41.6 bits (98), Expect = 3e-05
 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 6/84 (7%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGV-EWALFKIARGELPPIPDSVSRDARDFILKCLQ 95
           YG   D W++G  + EML    P+ G  E  LF+    +    P  +S++A+  +   L 
Sbjct: 173 YGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPRWLSKEAKSILKSFLT 232

Query: 96  VNPNDR----PTAAQ-LMEHPFVK 114
            NP  R    PT  Q +  HPF +
Sbjct: 233 KNPEKRLGCLPTGEQDIKGHPFFR 256

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 40.8 bits (95), Expect = 5e-05
 Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 3/72 (4%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  + E++T+ R PY G+     L ++ RG   P P        + +L
Sbjct: 178 GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELML 237

Query: 92  KCLQVNPNDRPT 103
           +C + +P +RPT
Sbjct: 238 QCWKKDPEERPT 249

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 40.7 bits (96), Expect = 5e-05
 Identities = 28/108 (25%), Positives = 39/108 (36%), Gaps = 33/108 (30%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVE--------------------WALF-------K 69
           Y    D+W+VGC   E+L    P F  E                    W          K
Sbjct: 178 YDPGVDLWAVGCIFAELL-NGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNK 236

Query: 70  IARGELPPIP-----DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
           I   E  PIP        S +A D +   L  +P+ R +AA+ + HP+
Sbjct: 237 ITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPY 284

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 40.8 bits (95), Expect = 5e-05
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  + E+ T+ R PY G+     L ++ RG   P P        D + 
Sbjct: 178 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 237

Query: 92  KCLQVNPNDRPT 103
           +C +  P +RPT
Sbjct: 238 QCWRKEPEERPT 249

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 41.0 bits (96), Expect = 6e-05
 Identities = 31/109 (28%), Positives = 45/109 (41%), Gaps = 32/109 (29%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW---ALFKIARGELPP----------IPD--- 80
           Y  P DIWSVGC   EM+ + +P F  +     LFKI R    P          +PD   
Sbjct: 181 YSTPVDIWSVGCIFAEMVNQ-KPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKS 239

Query: 81  ---------------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
                          ++     D + K L+++P+ R TA   +EH + K
Sbjct: 240 AFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFK 288

Length = 294

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 40.1 bits (94), Expect = 9e-05
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 3/78 (3%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
           G +   +D+WS G  + EM T  + PY G+       +I  G   P P    ++    +L
Sbjct: 179 GTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPAKCPQEIYKIML 238

Query: 92  KCLQVNPNDRPTAAQLME 109
           +C    P DRP+   L E
Sbjct: 239 ECWAAEPEDRPSFKALRE 256

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 39.7 bits (93), Expect = 1e-04
 Identities = 30/125 (24%), Positives = 44/125 (35%), Gaps = 33/125 (26%)

Query: 19  VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIAR--- 72
           V+ W    D +  +K   Y    D+WS GC   E+    RP F    V+  L +I R   
Sbjct: 161 VTLWYRPPDVLFGAK--LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLG 218

Query: 73  ----------GELPPIPDSVSRDA---------------RDFILKCLQVNPNDRPTAAQL 107
                      +LP         A               RD +   L  NP  R +A + 
Sbjct: 219 TPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEA 278

Query: 108 MEHPF 112
           ++HP+
Sbjct: 279 LQHPY 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 39.6 bits (93), Expect = 1e-04
 Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 15/96 (15%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRC-RPYFGV--EWAL-FKIARG 73
           RW    SL D V  +K       +D+WS G  + EM T   +PY G+  E  L F I  G
Sbjct: 186 RWMAPESLKDGVFTTK-------SDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGG 238

Query: 74  ELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLME 109
            L   P++      + +  C Q NP  RPT  +++ 
Sbjct: 239 HLDL-PENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 39.6 bits (92), Expect = 1e-04
 Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 32/106 (30%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF----------------GV----EWAL-FKIARGEL 75
           Y  P D+WSVGC   EM  R +P F                G+    +W     + RG  
Sbjct: 184 YATPVDMWSVGCIFAEMFRR-KPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAF 242

Query: 76  PP---------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
            P         +P+     A   +L+ L  NP+ R +A + ++HPF
Sbjct: 243 SPRGPRPVQSVVPEIEESGA-QLLLEMLTFNPHKRISAFRALQHPF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 39.5 bits (92), Expect = 2e-04
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 3/72 (4%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVE--WALFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  + E++T  R PY G+     +  + RG   P PD+   +  + + 
Sbjct: 178 GTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPEELYELMR 237

Query: 92  KCLQVNPNDRPT 103
            C +  P +RPT
Sbjct: 238 LCWKEKPEERPT 249

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 39.7 bits (92), Expect = 2e-04
 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  + E++T+ R PY G+     L ++ RG   P P        + + 
Sbjct: 178 GRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHELMK 237

Query: 92  KCLQVNPNDRPT 103
            C + +P++RPT
Sbjct: 238 LCWKKDPDERPT 249

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 39.3 bits (92), Expect = 2e-04
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 3/72 (4%)

Query: 41  ADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKCLQVN 97
           +D+WS G TV E++T   +PY G+        + +GE  P P   + D    ++KC  ++
Sbjct: 192 SDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQPPICTIDVYMVLVKCWMID 251

Query: 98  PNDRPTAAQLME 109
              RPT  +L+ 
Sbjct: 252 AESRPTFKELIN 263

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 39.6 bits (92), Expect = 2e-04
 Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 32/106 (30%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF----------------GV----EW----ALFKIAR 72
           Y  P D+WSVGC   EM  R +P F                G+    +W    AL + A 
Sbjct: 186 YATPVDLWSVGCIFAEMFRR-KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAF 244

Query: 73  GELPP------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
                      + D +    +D +LKCL  NP  R +A   + HP+
Sbjct: 245 HSKSAQPIEKFVTD-IDELGKDLLLKCLTFNPAKRISAYSALSHPY 289

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 39.3 bits (92), Expect = 2e-04
 Identities = 32/111 (28%), Positives = 40/111 (36%), Gaps = 36/111 (32%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF----GVEWALFKIARGELPPIPDS---VSR----- 84
           Y    D+W VGC   EM T  RP F     VE  L KI R    P  ++   VS      
Sbjct: 181 YSTSLDMWGVGCIFYEMATG-RPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFK 239

Query: 85  -----------------------DARDFILKCLQVNPNDRPTAAQLMEHPF 112
                                     +  LK LQ  P  R +AA+ M+HP+
Sbjct: 240 PYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPY 290

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 39.3 bits (92), Expect = 2e-04
 Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 32/107 (29%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW---ALFKIAR----------GELPPIPD--- 80
           Y  P DIWS+G    EM T+ +P F  +     LF+I R            +  +PD   
Sbjct: 179 YSTPVDIWSIGTIFAEMATK-KPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKN 237

Query: 81  ---------------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
                          ++  D  D + K L  +P  R +A + + HP+
Sbjct: 238 TFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPY 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 39.2 bits (91), Expect = 2e-04
 Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 12/90 (13%)

Query: 24  SLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWA-LFKIAR--GELPPIP 79
           SL D+V  +K       +D+WS G T+ E+ TR + PY GVE + ++   R    L   P
Sbjct: 185 SLADRVYTTK-------SDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPP 237

Query: 80  DSVSRDARDFILKCLQVNPNDRPTAAQLME 109
           D +       +  C  +NP DRP+   L  
Sbjct: 238 DCLD-GLYSLMSSCWLLNPKDRPSFETLRC 266

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 38.8 bits (90), Expect = 3e-04
 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 6/82 (7%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYF--GVEWALFKIARGELPPIPDSVSRDARDFILKC 93
           GY    D W++G  + EMLT   P++   V     KI +  L   PD   RDA+D ++  
Sbjct: 169 GYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPL-RFPDGFDRDAKDLLIGL 227

Query: 94  LQVNPNDR---PTAAQLMEHPF 112
           L  +P  R     A ++  HPF
Sbjct: 228 LSRDPTRRLGYNGAQEIKNHPF 249

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 38.6 bits (90), Expect = 3e-04
 Identities = 27/106 (25%), Positives = 40/106 (37%), Gaps = 31/106 (29%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-------------------------GV----EWAL 67
           Y  P DIWSVGC   EM  + +P F                         GV    +W  
Sbjct: 189 YSTPVDIWSVGCIFAEMSRK-QPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHE 247

Query: 68  FKIARGE-LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
           F   + + L      +S +  D + K L+ +P  R +A   + HP+
Sbjct: 248 FPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPY 293

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 38.7 bits (90), Expect = 3e-04
 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 18/81 (22%)

Query: 42  DIWSVGCTVLEMLT-----RCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
           D WS+G  + E+LT      C P          I       IP+ VS +AR  + + LQ 
Sbjct: 164 DWWSLGAILFELLTGKTLVECHPS--------GINTHTTLNIPEWVSEEARSLLQQLLQF 215

Query: 97  NPNDRPTAA-----QLMEHPF 112
           NP +R  A       +  HPF
Sbjct: 216 NPTERLGAGVAGVEDIKSHPF 236

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 38.8 bits (90), Expect = 3e-04
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 3/72 (4%)

Query: 41  ADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKCLQVN 97
           +D+WS G TV E++T   +PY G+        + +GE  P P   + D    ++KC  ++
Sbjct: 192 SDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDVYMIMVKCWMID 251

Query: 98  PNDRPTAAQLME 109
              RP   +L++
Sbjct: 252 SECRPRFRELVD 263

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 38.8 bits (90), Expect = 3e-04
 Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 3/76 (3%)

Query: 35  GGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWALFK--IARGELPPIPDSVSRDARDFIL 91
           G Y   +D+WS G TV EM++    PY G+        + +GE    P   + D    ++
Sbjct: 186 GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQPQICTIDVYMVMV 245

Query: 92  KCLQVNPNDRPTAAQL 107
           KC  ++ N RPT  +L
Sbjct: 246 KCWMIDENVRPTFKEL 261

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 38.5 bits (90), Expect = 4e-04
 Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 15/99 (15%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG----------VEW-ALFKIARGELP 76
           +V+  K  GY    D WS+GC + E L    P+ G            W    +    + P
Sbjct: 168 EVLRGK--GYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDP 225

Query: 77  PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
               ++S +A D I K +        +   +  HPF K 
Sbjct: 226 RF--NLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKE 262

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 38.6 bits (90), Expect = 4e-04
 Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 33/111 (29%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIA-------------RGEL-------- 75
           Y    D+W+ GC   EMLT  +P F     L ++              R EL        
Sbjct: 196 YTKAIDMWAAGCIFAEMLTG-KPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFV 254

Query: 76  --------PPIPD---SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
                    P+ D    V+ +A DF+ + L  NP DR TA + + HP++  
Sbjct: 255 RNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC 305

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 38.4 bits (89), Expect = 4e-04
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)

Query: 37  YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
           Y   +D+WS G TV E++T   +PY G+  +     + +GE  P P   + D    ++KC
Sbjct: 188 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 247

Query: 94  LQVNPNDRPTAAQLM 108
             ++ + RP   +L+
Sbjct: 248 WMIDADSRPKFRELI 262

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 38.2 bits (89), Expect = 4e-04
 Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 4/75 (5%)

Query: 37  YGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELP-PIPDSVSRDARDFILK 92
           +   +D+WS G  + E+ T+   P++G+  E  L ++  G+L  P+P+         + +
Sbjct: 195 FSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTR 254

Query: 93  CLQVNPNDRPTAAQL 107
           C  VNP DRP+ ++L
Sbjct: 255 CWAVNPKDRPSFSEL 269

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 38.2 bits (89), Expect = 5e-04
 Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 6/85 (7%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGV-EWALFKIARGELPPIPDSVSRDARDFILKCLQ 95
           YG   D W+ G  + EML    P+ G  E  LF+         P S+S++A       L 
Sbjct: 178 YGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLLT 237

Query: 96  VNPNDR----PTAAQ-LMEHPFVKR 115
            +P  R    PT  + + EH F +R
Sbjct: 238 KHPAKRLGCGPTGERDIREHAFFRR 262

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 38.2 bits (89), Expect = 5e-04
 Identities = 28/94 (29%), Positives = 38/94 (40%), Gaps = 10/94 (10%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG---VEWALFKIA----RGELPPIPD 80
           Q +    G YG   D WS+G  + EML    P++    VE    KI       + PP   
Sbjct: 176 QAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE-TYGKIMNHKEHFQFPPDVT 234

Query: 81  SVSRDARDFILK--CLQVNPNDRPTAAQLMEHPF 112
            VS +A+D I +  C       R       +HPF
Sbjct: 235 DVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPF 268

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 37.8 bits (88), Expect = 6e-04
 Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 3/66 (4%)

Query: 41  ADIWSVGCTVLEMLTRCR-PYFGVEWA--LFKIARGELPPIPDSVSRDARDFILKCLQVN 97
           +D+WS G  + E++T  R PY G+  A  L ++ +G   P P    ++  D +L C + +
Sbjct: 185 SDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPPGCPKELYDIMLDCWKED 244

Query: 98  PNDRPT 103
           P+DRPT
Sbjct: 245 PDDRPT 250

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 37.8 bits (88), Expect = 7e-04
 Identities = 30/116 (25%), Positives = 45/116 (38%), Gaps = 38/116 (32%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIAR----------------GELP---- 76
           Y    D+WSVGC   E+LT  +P F  E  + ++ R                 +LP    
Sbjct: 211 YHFAVDMWSVGCIFAELLTG-KPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTE 269

Query: 77  -------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHP-FVKRPLP 118
                        P       DA D +   L++NP +R +A + ++H  F   PLP
Sbjct: 270 FTPRKPKDLKTIFPNASD---DAIDLLQSLLKLNPLERISAKEALKHEYFKSDPLP 322

Length = 335

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 37.8 bits (88), Expect = 7e-04
 Identities = 32/125 (25%), Positives = 48/125 (38%), Gaps = 34/125 (27%)

Query: 19  VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWA-----LFKIA- 71
           V+ W    D ++ S+   Y    DIWSVGC + EM+T  RP F G         +F+I  
Sbjct: 162 VTLWYRAPDVLLGSRT--YSTSIDIWSVGCIMAEMITG-RPLFPGTNNEDQLLKIFRIMG 218

Query: 72  ----------------RGELPPIPD--------SVSRDARDFILKCLQVNPNDRPTAAQL 107
                           +   P  P                D + + LQ+NP  R +A   
Sbjct: 219 TPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDA 278

Query: 108 MEHPF 112
           ++HP+
Sbjct: 279 LQHPW 283

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 37.7 bits (87), Expect = 7e-04
 Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 8/112 (7%)

Query: 7   EGLGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW- 65
           EG+ +A   K        L  +V+   +  YG   D W +G  + EM+    P++  +  
Sbjct: 144 EGITDAATMKTFCGTPEYLAPEVLEDND--YGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 201

Query: 66  ALFKIARGELPPIPDSVSRDARDFILKCLQVNPNDR-----PTAAQLMEHPF 112
            LF++   E    P ++S DA+  +   L  +PN R       A ++M H F
Sbjct: 202 KLFELILMEDIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSF 253

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 37.3 bits (87), Expect = 8e-04
 Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 9/88 (10%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGELPPIPDSV--SRDARDFI 90
           GY    D WS+G  + EML    P+      E     I   E    PD V  S +A+D I
Sbjct: 215 GYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLI 274

Query: 91  LKCLQVNPNDR---PTAAQLMEHPFVKR 115
            + L      R       ++  HPF K 
Sbjct: 275 KR-LCCEAERRLGNNGVNEIKSHPFFKG 301

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 37.3 bits (86), Expect = 0.001
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)

Query: 58  RPYFGVEWALFKIARGELPPIPDSV-SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
           RP   +   L  I     P +P+ V + D ++F+ KCL  NP +R     LM H F+KR
Sbjct: 248 RPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKR 306

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 37.3 bits (86), Expect = 0.001
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)

Query: 37  YGLPADIWSVGCTVLEMLTR-CRPYFGV---EWALFKIARGELPPIPDSVSRDARDFILK 92
           Y + +D+WS G  + E+ +    PY GV   E    ++  G     PD  + +    +L 
Sbjct: 258 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 317

Query: 93  CLQVNPNDRPTAAQLMEH 110
           C    P+ RPT ++L+EH
Sbjct: 318 CWHGEPSQRPTFSELVEH 335

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|173767 cd08227, PK_STRAD_alpha, Pseudokinase domain of STE20-related kinase adapter protein alpha

 Score = 37.2 bits (86), Expect = 0.001
 Identities = 15/39 (38%), Positives = 23/39 (58%)

Query: 77  PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
           P   + S     F+ +CLQ NP+ RP+A+ L+ H F K+
Sbjct: 274 PYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 312

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha, stabilized through ATP and MO25, may be needed to activate LKB1. A mutation which results in a truncation of a C-terminal part of the human STRAD-alpha pseudokinase domain and disrupts its association with LKB1, leads to PMSE (polyhydramnios, megalencephaly, symptomatic epilepsy) syndrome. Several splice variants of STRAD-alpha exist which exhibit different effects on the localization and activation of LKB1. Length = 327

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 37.0 bits (86), Expect = 0.001
 Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 36/127 (28%)

Query: 19  VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWA-----LFKI-- 70
           V+RW    + ++N     Y    D+WSVGC   E+L R +P F G ++      + ++  
Sbjct: 170 VTRWYRAPELLLNCSE--YTTAIDVWSVGCIFAELLGR-KPLFPGKDYVHQLKLITELLG 226

Query: 71  --------------ARG---ELPPIPD--------SVSRDARDFILKCLQVNPNDRPTAA 105
                         AR     LP  P           +  A D + K L  +P+ R T  
Sbjct: 227 SPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVE 286

Query: 106 QLMEHPF 112
           + + HP+
Sbjct: 287 EALAHPY 293

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 36.8 bits (86), Expect = 0.001
 Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 35/110 (31%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF----------------GV-------EWALFKIARG 73
           Y    D+WSVGC   E+LT+ +P F                G         ++    A+ 
Sbjct: 184 YSTAIDMWSVGCIFAELLTK-KPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKK 242

Query: 74  ELPPIPD-----------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
           +                 S+S +  D + + L  +P  R +A   ++HP+
Sbjct: 243 KTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPY 292

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 36.9 bits (85), Expect = 0.001
 Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 58  RPYFGVEWALFKIARGELPPIPDSV-SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
           RP   +   L  I     P +P  V   + +DF+ KCL  NP +R    QLM H F+KR
Sbjct: 246 RPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 304

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 36.8 bits (85), Expect = 0.001
 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 24  SLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGV---EWALFKIARGELPPIP 79
           S+ D+V  ++       +D+WS G  + E+ +    PY GV   E    ++  G     P
Sbjct: 246 SIFDKVYTTQ-------SDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAP 298

Query: 80  DSVSRDARDFILKCLQVNPNDRPTAAQLMEH 110
           +  + +    +L C   NP DRPT ++L+E 
Sbjct: 299 EYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 36.5 bits (84), Expect = 0.002
 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 14/89 (15%)

Query: 24  SLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVE----WALFKIARGELPPI 78
           SL D +  ++       +D+WS G  + E++T    PY G+     + L K   G     
Sbjct: 200 SLFDHIYTTQ-------SDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKT--GYRMER 250

Query: 79  PDSVSRDARDFILKCLQVNPNDRPTAAQL 107
           P++ S +  + +L C +  P+ RPT A +
Sbjct: 251 PENCSEEMYNLMLTCWKQEPDKRPTFADI 279

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 36.2 bits (84), Expect = 0.002
 Identities = 27/115 (23%), Positives = 41/115 (35%), Gaps = 34/115 (29%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYF----------------GV--EWALFKIAR--- 72
              Y    D+WSVGC + E+L R +P F                G   E  L +I     
Sbjct: 184 FQSYTKAIDVWSVGCILAELLGR-KPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKA 242

Query: 73  -------GELPPIPDS-----VSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
                    +P  P        +  A D + K L  +P  R +  + +EHP++  
Sbjct: 243 QNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAI 297

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 35.9 bits (83), Expect = 0.003
 Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 35/109 (32%)

Query: 40  PA-DIWSVGCTVLEMLTRCRPYF---GVEWALFKIARGELPPIPDSVSR----DARDFI- 90
           PA DIWS+GC   E+LT  +P F    V   L  I      P P+++SR     AR ++ 
Sbjct: 187 PAIDIWSIGCIFAEVLTG-KPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLS 245

Query: 91  ---------------------LKCLQ----VNPNDRPTAAQLMEHPFVK 114
                                L+ L+     +P DRPTA + +  P+ K
Sbjct: 246 SMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFK 294

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 36.0 bits (83), Expect = 0.003
 Identities = 23/95 (24%), Positives = 36/95 (37%), Gaps = 16/95 (16%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGEL--------PPIPDSVSR 84
           KN  Y    D W +GC + EM+    P+   +    K+ R E+            +  S 
Sbjct: 174 KNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKE---KVKREEVERRVKEDQEEYSEKFSE 230

Query: 85  DARDFILKCLQVNPNDR-----PTAAQLMEHPFVK 114
            AR    + L  +P  R       A ++  HPF +
Sbjct: 231 AARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFR 265

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 35.9 bits (83), Expect = 0.003
 Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 6/82 (7%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW-ALFKIARGELPPIPDSVSRDARDFILKCLQ 95
           YG   D W +G  + EM+    P++  +   LF++   E    P ++S +A+  +   L+
Sbjct: 172 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLAGLLK 231

Query: 96  VNPNDR-----PTAAQLMEHPF 112
            +P  R       A ++MEH F
Sbjct: 232 KDPKQRLGGGPEDAKEIMEHRF 253

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 35.9 bits (83), Expect = 0.003
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)

Query: 37  YGLPADIWSVGCTVLEMLTRC-RPYFGVE-WALFKIAR-GELPPIPDSVSRDARDFILKC 93
           Y   +D+WS G  + E+ T    PY G+    LFK+ + G     P + +++    +  C
Sbjct: 211 YTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYRMEKPQNCTQELYHLMRDC 270

Query: 94  LQVNPNDRPTAAQLME 109
               P+ RPT  QL+E
Sbjct: 271 WHEVPSQRPTFKQLVE 286

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 35.3 bits (81), Expect = 0.004
 Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 14/105 (13%)

Query: 7   EGLGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEW 65
           +G  + L  KW      SL D V       Y   +D+W+ G T+ E++TR + PY GVE 
Sbjct: 171 QGCASKLPVKWLA--LESLADNV-------YTTHSDVWAFGVTMWEIMTRGQTPYAGVEN 221

Query: 66  AL---FKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQL 107
           +    + I    L   PD +  D  + + +C    P  RP+   L
Sbjct: 222 SEIYNYLIKGNRLKQPPDCLE-DVYELMCQCWSPEPKCRPSFQHL 265

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 35.6 bits (82), Expect = 0.004
 Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 3/74 (4%)

Query: 37  YGLPADIWSVGCTVLEMLTR-CRPYFGV--EWALFKIARGELPPIPDSVSRDARDFILKC 93
           Y   +D+W+ G  + E+ +   +PY+G+  E  ++ +  G +   PD+   +  + +  C
Sbjct: 209 YTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCPDNCPLELYNLMRLC 268

Query: 94  LQVNPNDRPTAAQL 107
               P+DRP+ A +
Sbjct: 269 WSKLPSDRPSFASI 282

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 35.4 bits (81), Expect = 0.004
 Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 3/72 (4%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWA--LFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  + E++T  + PY G+  +  +  + RG   P  ++   +  D + 
Sbjct: 179 GSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCPDELYDIMK 238

Query: 92  KCLQVNPNDRPT 103
            C +    +RPT
Sbjct: 239 TCWKEKAEERPT 250

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	133
KOG0578	550	consensus p21-activated serine/threonine protein k	99.89
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.89
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.89
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.88
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.88
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.87
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.86
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.84
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.83
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.82
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.82
KOG0198	313	consensus MEKK and related serine/threonine protei	99.82
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.82
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.81
KOG0610	459	consensus Putative serine/threonine protein kinase	99.81
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.81
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.81
KOG0605	550	consensus NDR and related serine/threonine kinases	99.81
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.8
PTZ00284	467	protein kinase; Provisional	99.8
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.79
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.78
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.78
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.78
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.78
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.77
PTZ00036	440	glycogen synthase kinase; Provisional	99.77
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.77
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.76
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.76
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.76
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.76
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.76
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.76
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.76
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.76
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.76
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.76
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.76
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.75
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.75
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.75
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.75
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.75
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.75
PTZ00283	496	serine/threonine protein kinase; Provisional	99.75
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.75
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.75
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.75
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.75
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.75
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.75
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.75
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.75
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.74
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.74
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.74
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.74
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.74
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.74
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.74
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.74
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.74
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.73
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.73
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.73
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.73
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.73
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.73
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.73
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.73
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.73
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.73
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.73
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.73
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.73
PTZ00267	478	NIMA-related protein kinase; Provisional	99.73
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.73
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.72
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.72
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.72
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.72
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.72
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.72
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.72
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.72
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.72
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.72
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.72
KOG0589	426	consensus Serine/threonine protein kinase [General	99.71
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.71
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.71
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.71
PHA02988	283	hypothetical protein; Provisional	99.71
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.71
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.71
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.71
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.71
KOG0584	632	consensus Serine/threonine protein kinase [General	99.7
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.7
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.7
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.7
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.7
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.7
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.7
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.7
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.7
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.7
PHA03207	392	serine/threonine kinase US3; Provisional	99.7
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.7
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.7
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.69
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.69
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.69
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.69
PHA03212	391	serine/threonine kinase US3; Provisional	99.69
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.69
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.69
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.69
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.69
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.69
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.69
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.69
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.69
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.69
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.68
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.68
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.68
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.68
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.68
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.68
PLN00181	793	protein SPA1-RELATED; Provisional	99.68
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.68
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.68
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.68
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.68
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.68
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.67
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.67
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.67
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.67
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.67
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.67
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.67
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.67
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.67
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.67
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.67
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.67
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.67
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.67
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.67
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.67
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.67
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.67
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.67
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.67
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.67
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.67
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.66
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.66
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.66
PHA03209	357	serine/threonine kinase US3; Provisional	99.66
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.66
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.66
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.66
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.66
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.66
PHA03211	461	serine/threonine kinase US3; Provisional	99.66
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.66
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.66
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.66
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.66
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.66
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.66
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.66
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.66
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.66
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.65
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.65
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.65
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.65
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.65
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.65
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.65
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.65
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.65
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.65
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.65
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.65
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.65
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.65
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.65
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.65
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.65
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.64
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.64
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.64
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.64
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.64
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.64
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.64
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.64
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.64
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.64
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.64
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.64
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.63
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.63
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.63
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.63
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.63
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.63
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.63
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.63
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.63
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.63
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.63
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.63
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.63
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.63
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.63
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.63
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.62
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.62
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.62
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.62
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.62
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.62
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.62
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.62
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.62
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.62
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.62
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.62
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.62
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.62
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.62
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.62
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.61
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.61
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.61
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.61
PHA03210	501	serine/threonine kinase US3; Provisional	99.61
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.61
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.61
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.61
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.61
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.61
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.61
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.61
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.61
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.61
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.61
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.6
PLN00009	294	cyclin-dependent kinase A; Provisional	99.6
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.6
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.6
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.6
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.6
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.6
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.59
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.59
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.59
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.59
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.59
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.59
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.59
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.59
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.59
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.59
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.59
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.58
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.58
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.58
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.58
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.58
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.58
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.58
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.58
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.58
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.58
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.58
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.58
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.58
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.57
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.57
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.57
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.57
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.57
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.57
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.57
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.57
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.57
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.57
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.57
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.57
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.57
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.56
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.56
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.56
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.56
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.56
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.56
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.56
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.56
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.56
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.56
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.56
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.56
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.56
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.56
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.55
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.55
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.55
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.55
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.55
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.55
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.55
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.55
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.55
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.54
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.54
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.54
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.54
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.54
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.54
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.54
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.54
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.53
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.53
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.53
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.53
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.53
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.53
PHA02882	294	putative serine/threonine kinase; Provisional	99.53
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.53
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.52
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.52
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.52
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.52
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.52
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.52
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.52
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.52
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.51
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.51
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.51
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.51
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.51
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.5
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.5
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.5
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.5
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.5
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.49
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.49
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.49
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.49
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.49
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.49
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.49
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.48
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.47
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.47
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.46
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.46
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.46
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.45
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.44
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.44
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.44
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.43
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.43
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.42
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.42
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.42
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.42
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.41
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.4
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.38
KOG0586	596	consensus Serine/threonine protein kinase [General	99.38
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.38
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.36
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.36
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.34
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.32
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.28
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.24
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.21
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.2
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.19
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.18
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.17
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.17
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.13
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.09
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.08
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.05
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	98.91
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.82
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	98.81
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.73
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	98.71
KOG3653	534	consensus Transforming growth factor beta/activin	98.6
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	98.41
KOG2052	513	consensus Activin A type IB receptor, serine/threo	98.4
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.26
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.25
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	98.16
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.09
COG0515	384	SPS1 Serine/threonine protein kinase [General func	97.89
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	97.73
KOG1152	772	consensus Signal transduction serine/threonine kin	97.71
KOG0590	601	consensus Checkpoint kinase and related serine/thr	97.68
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	97.55
KOG1266	458	consensus Protein kinase [Signal transduction mech	97.01
KOG2137	700	consensus Protein kinase [Signal transduction mech	96.89
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	96.06
COG4248	637	Uncharacterized protein with protein kinase and he	93.59
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	93.31
KOG1093	725	consensus Predicted protein kinase (contains TBC a	87.99
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	82.76

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=2.1e-23  Score=146.73  Aligned_cols=100  Identities=35%  Similarity=0.635  Sum_probs=86.1

Q ss_pred             hhhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCC--CCCCCHHHHHH
Q 032788           14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDARDF   89 (133)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~   89 (133)
                      ..++++||++|||||++..  ..|+.++||||||++.+||..|.+||...+  ..++.+..+..+.+  +..++..+++|
T Consensus       425 KR~TmVGTPYWMAPEVvtr--k~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdF  502 (550)
T KOG0578|consen  425 KRSTMVGTPYWMAPEVVTR--KPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDF  502 (550)
T ss_pred             ccccccCCCCccchhhhhh--cccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHH
Confidence            4567899999999999987  459999999999999999999999998654  55666655544443  67889999999


Q ss_pred             HHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           90 ILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        90 ~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      +.+||..|+.+|+++.++|+|||+..
T Consensus       503 L~~cL~~dv~~RasA~eLL~HpFl~~  528 (550)
T KOG0578|consen  503 LDRCLVVDVEQRASAKELLEHPFLKM  528 (550)
T ss_pred             HHHHhhcchhcCCCHHHHhcChhhhh
Confidence            99999999999999999999999954

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.89  E-value=2.2e-23  Score=140.50  Aligned_cols=108  Identities=28%  Similarity=0.518  Sum_probs=93.4

Q ss_pred             hhhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCh-----H--HHHHHHHhCCCCCCCCC-CCHH
Q 032788           14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-----E--WALFKIARGELPPIPDS-VSRD   85 (133)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~-----~--~~~~~~~~~~~~~~~~~-~~~~   85 (133)
                      .+++++||..|||||++.+  ..|+.++||||+|++++|+..|+.|+...     .  +-+..+..+..+.+|.. ++++
T Consensus       233 ~a~tfvGT~~YMsPERi~g--~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~e  310 (364)
T KOG0581|consen  233 IANTFVGTSAYMSPERISG--ESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPE  310 (364)
T ss_pred             hcccccccccccChhhhcC--CcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHH
Confidence            5688999999999999998  45999999999999999999999998763     1  34556666677778886 9999


Q ss_pred             HHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCCCCCCC
Q 032788           86 ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGL  123 (133)
Q Consensus        86 ~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~~~~~~  123 (133)
                      +.+|+..|++.||.+|++++|+++|||+++......++
T Consensus       311 f~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~~~vd~  348 (364)
T KOG0581|consen  311 FRSFVSCCLRKDPSERPSAKQLLQHPFIKKFEDPNVDM  348 (364)
T ss_pred             HHHHHHHHhcCCcccCCCHHHHhcCHHHhhcccccccH
Confidence            99999999999999999999999999999876655553

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.89  E-value=5.9e-23  Score=145.51  Aligned_cols=106  Identities=30%  Similarity=0.542  Sum_probs=89.4

Q ss_pred             hhhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHH
Q 032788           14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFIL   91 (133)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (133)
                      +..+.||||.|.|||++..  .+++..+||||+||++|.|+.|++||....  +.+.+++...+ ..|..++.+..+++.
T Consensus       174 rk~TlCGTPNYIAPEVl~k--~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y-~~P~~ls~~A~dLI~  250 (592)
T KOG0575|consen  174 RKKTLCGTPNYIAPEVLNK--SGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEY-SMPSHLSAEAKDLIR  250 (592)
T ss_pred             ccceecCCCcccChhHhcc--CCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCc-ccccccCHHHHHHHH
Confidence            3456799999999999997  458999999999999999999999998765  45555554443 668899999999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCC-CCCCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFV-KRPLPTSWG  122 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~-~~~~~~~~~  122 (133)
                      .+|..+|.+||++++++.|+|| ++..+...+
T Consensus       251 ~lL~~~P~~Rpsl~~vL~h~Ff~~g~~p~~lp  282 (592)
T KOG0575|consen  251 KLLRPNPSERPSLDEVLDHPFFKSGFTPARLP  282 (592)
T ss_pred             HHhcCCcccCCCHHHHhcCHhhhCCCcCCCCC
Confidence            9999999999999999999999 445554433

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.88  E-value=1e-22  Score=145.88  Aligned_cols=100  Identities=27%  Similarity=0.547  Sum_probs=88.0

Q ss_pred             hhhccccccccccccccccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHH
Q 032788           14 RRKWHVSRWNSLTDQVVNSKNGGY-GLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFI   90 (133)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~-~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (133)
                      ...+.||+++|.|||++.+.  .| +.++||||||+++|.|++|..||.+.+  .-+.+++.|.+ ..|..++.++.+++
T Consensus       167 lLeTSCGSPHYA~PEIV~G~--pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f-~MPs~Is~eaQdLL  243 (786)
T KOG0588|consen  167 LLETSCGSPHYAAPEIVSGR--PYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVF-EMPSNISSEAQDLL  243 (786)
T ss_pred             cccccCCCcccCCchhhcCC--CCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcc-cCCCcCCHHHHHHH
Confidence            45678999999999999983  46 679999999999999999999999776  34556666665 66889999999999


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      .+|+..||..|++.+||++|||+.+.
T Consensus       244 r~ml~VDp~~RiT~~eI~kHP~l~g~  269 (786)
T KOG0588|consen  244 RRMLDVDPSTRITTEEILKHPFLSGY  269 (786)
T ss_pred             HHHhccCccccccHHHHhhCchhhcC
Confidence            99999999999999999999999864

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.88  E-value=1.5e-23  Score=143.99  Aligned_cols=100  Identities=34%  Similarity=0.582  Sum_probs=88.0

Q ss_pred             hhhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHH
Q 032788           14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFIL   91 (133)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (133)
                      ..++++||+.|||||++..  ..|+.++||||||++.+||.+|.+|+....  ..+..+.+...+.+....++.+++|+.
T Consensus       167 rr~tfvGTPfwMAPEVI~~--~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~~~~S~~~kEFV~  244 (467)
T KOG0201|consen  167 RRKTFVGTPFWMAPEVIKQ--SGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLDGDFSPPFKEFVE  244 (467)
T ss_pred             ccccccccccccchhhhcc--ccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccccccCHHHHHHHH
Confidence            4478999999999999996  569999999999999999999999998765  345555666666677788999999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      .|+..+|..||++.++++|+|.+.
T Consensus       245 ~CL~k~P~~RpsA~~LLKh~FIk~  268 (467)
T KOG0201|consen  245 ACLDKNPEFRPSAKELLKHKFIKR  268 (467)
T ss_pred             HHhhcCcccCcCHHHHhhhHHHHh
Confidence            999999999999999999999976

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.87  E-value=1.4e-23  Score=143.32  Aligned_cols=103  Identities=29%  Similarity=0.426  Sum_probs=83.2

Q ss_pred             hhccccccccccccccccCCCC-CCchhHHHHHHHHHHHHHhCCCCCCChH--H-HHHHHHhCCC---CCCCCCCCHHHH
Q 032788           15 RKWHVSRWNSLTDQVVNSKNGG-YGLPADIWSVGCTVLEMLTRCRPYFGVE--W-ALFKIARGEL---PPIPDSVSRDAR   87 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~-~~~~~diws~g~~~~~l~~~~~p~~~~~--~-~~~~~~~~~~---~~~~~~~~~~~~   87 (133)
                      -++.|||+.|.|||++...... +..++|+||+||++|-+++|.+||.+..  . ....+.++.+   +..+..++.+..
T Consensus       335 m~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~  414 (475)
T KOG0615|consen  335 MKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEAL  414 (475)
T ss_pred             hhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHH
Confidence            3567999999999999864222 3458999999999999999999998653  2 3334444544   344677899999


Q ss_pred             HHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           88 DFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        88 ~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      +++..||..||.+|+++.++|+||||+...
T Consensus       415 dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  415 DLINWMLVVDPENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             HHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence            999999999999999999999999998544

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.86  E-value=2.2e-21  Score=125.70  Aligned_cols=97  Identities=28%  Similarity=0.505  Sum_probs=83.1

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCC-hHHHH-HHHHhCCC---CCCCCCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG-VEWAL-FKIARGEL---PPIPDSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~-~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~   91 (133)
                      .++|||.||+||++..  .+|+..+|+|++|+++|-++.|.+||.+ ....+ ..++.+..   ++.+..++.+.+++++
T Consensus       171 G~~GtP~fmaPEvvrk--dpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~Lvr  248 (355)
T KOG0033|consen  171 GFAGTPGYLSPEVLKK--DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIR  248 (355)
T ss_pred             cccCCCcccCHHHhhc--CCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHH
Confidence            3599999999999998  6799999999999999999999999988 44444 44444433   3356788999999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      +|+..||.+|+|+.|+|+|||...
T Consensus       249 rML~~dP~kRIta~EAL~HpWi~~  272 (355)
T KOG0033|consen  249 RMLTVNPKKRITADEALKHPWICN  272 (355)
T ss_pred             HHhccChhhhccHHHHhCCchhcc
Confidence            999999999999999999999975

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.84  E-value=1.1e-20  Score=132.86  Aligned_cols=109  Identities=28%  Similarity=0.513  Sum_probs=90.8

Q ss_pred             hhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH--HHHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      +.+++||..|.+||++..+  ..+..+|+|++||++|+|+.|.+||.+.++  .+++++.-. ...+...+..+.+++.+
T Consensus       244 ~~SFVGTAeYVSPElL~~~--~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~-y~fp~~fp~~a~dLv~K  320 (604)
T KOG0592|consen  244 RSSFVGTAEYVSPELLNDS--PAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALD-YEFPEGFPEDARDLIKK  320 (604)
T ss_pred             ccceeeeecccCHHHhcCC--CCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhc-ccCCCCCCHHHHHHHHH
Confidence            4679999999999999984  478899999999999999999999998873  445555443 46788899999999999


Q ss_pred             HcccCCCCCCCHHHHhhCCCCCCC-CCCCCCCCcc
Q 032788           93 CLQVNPNDRPTAAQLMEHPFVKRP-LPTSWGLPTP  126 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~~~~~-~~~~~~~~~~  126 (133)
                      +|..||.+|++++||.+||||.+. ....|+..+|
T Consensus       321 LLv~dp~~Rlt~~qIk~HpFF~~Vdw~nlw~~~PP  355 (604)
T KOG0592|consen  321 LLVRDPSDRLTSQQIKAHPFFEGVDWENLWQQTPP  355 (604)
T ss_pred             HHccCccccccHHHHhhCcccccCChhhhhhcCCC
Confidence            999999999999999999999863 2235555444

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.83  E-value=1.4e-20  Score=127.01  Aligned_cols=100  Identities=30%  Similarity=0.514  Sum_probs=86.4

Q ss_pred             hhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ..++|||+.|||||++..  .+|+..+|.||+|+++|+|++|.+||.+.+  .....+..+.....+..++.+.++++.+
T Consensus       182 t~tfcGT~eYmAPEil~~--~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~ls~~ardll~~  259 (357)
T KOG0598|consen  182 TRTFCGTPEYMAPEILLG--KGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGYLSEEARDLLKK  259 (357)
T ss_pred             cccccCCccccChHHHhc--CCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCccCCHHHHHHHHH
Confidence            346899999999999998  459999999999999999999999998765  4455666565556667799999999999


Q ss_pred             HcccCCCCCC----CHHHHhhCCCCCCC
Q 032788           93 CLQVNPNDRP----TAAQLMEHPFVKRP  116 (133)
Q Consensus        93 ~l~~~p~~R~----s~~~~l~~~~~~~~  116 (133)
                      ++..||++|.    +++++..||||...
T Consensus       260 LL~rdp~~RLg~~~d~~~ik~HpfF~~i  287 (357)
T KOG0598|consen  260 LLKRDPRQRLGGPGDAEEIKRHPFFKGI  287 (357)
T ss_pred             HhccCHHHhcCCCCChHHhhcCcccccC
Confidence            9999999994    78999999999864

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=2.4e-20  Score=133.97  Aligned_cols=102  Identities=24%  Similarity=0.372  Sum_probs=89.6

Q ss_pred             hhhhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-HHHHHHHhCCCCCCCCCCCHHHHHHHH
Q 032788           13 LRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDSVSRDARDFIL   91 (133)
Q Consensus        13 ~~~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (133)
                      ....++|||+.|+|||++.+  ..|+..+|.|++||++|+|+.|..||.+.+ +.+...+......+|..++.+..++++
T Consensus       523 ~~TsTfCGTpey~aPEil~e--~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~ls~ea~~il~  600 (694)
T KOG0694|consen  523 DRTSTFCGTPEFLAPEVLTE--QSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSKEAIAIMR  600 (694)
T ss_pred             CccccccCChhhcChhhhcc--CcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCcccHHHHHHHH
Confidence            36778999999999999999  459999999999999999999999999776 455555556667889999999999999


Q ss_pred             HHcccCCCCCCC-----HHHHhhCCCCCCC
Q 032788           92 KCLQVNPNDRPT-----AAQLMEHPFVKRP  116 (133)
Q Consensus        92 ~~l~~~p~~R~s-----~~~~l~~~~~~~~  116 (133)
                      +++..+|++|.-     +++|.+||||+..
T Consensus       601 ~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i  630 (694)
T KOG0694|consen  601 RLLRKNPEKRLGSGERDAEDIKKHPFFRSI  630 (694)
T ss_pred             HHhccCcccccCCCCCCchhhhhCCccccC
Confidence            999999999963     6889999999864

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=8.6e-20  Score=126.96  Aligned_cols=100  Identities=29%  Similarity=0.455  Sum_probs=83.4

Q ss_pred             hhccccccccccccccccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCChH-HHHHHHHhCCCCCCCCCC-CHHHHHHHH
Q 032788           15 RKWHVSRWNSLTDQVVNSKNGGY-GLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDSV-SRDARDFIL   91 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~-~~~~diws~g~~~~~l~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~   91 (133)
                      .++.|||+.|+|||++.+. ..| +.++|+||+|+++|.|+.|..||...+ ..+...+.......|..+ +.++..++.
T Consensus       178 l~t~cGsp~Y~aPEvl~~~-~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~S~~~~~Li~  256 (370)
T KOG0583|consen  178 LKTFCGSPAYAAPEVLSGK-GTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLLSPEARSLIE  256 (370)
T ss_pred             ccCCCCCcccCCHHHhCCC-CCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcCCHHHHHHHH
Confidence            4567999999999999983 216 579999999999999999999998765 333322333334667777 999999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      +|+..+|..|+++.+++.|+||+.
T Consensus       257 ~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  257 KMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             HHcCCCcccCCCHHHHhhChhhcc
Confidence            999999999999999999999997

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.82  E-value=5.6e-21  Score=129.28  Aligned_cols=101  Identities=40%  Similarity=0.637  Sum_probs=82.6

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCh-H---HHHHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-E---WALFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      .+.||+.|||||++... .....++||||+||++.||++|..||... .   ..+........+..|..++.+..+|+..
T Consensus       180 ~~~Gtp~~maPEvi~~g-~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~  258 (313)
T KOG0198|consen  180 SVQGTPNYMAPEVIRNG-EVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAKDFLRK  258 (313)
T ss_pred             cccCCccccCchhhcCC-CcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHHHHHHH
Confidence            46999999999999851 12235999999999999999999999762 2   3333333444567888999999999999


Q ss_pred             HcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           93 CLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      |+..+|..|||+++++.|||......
T Consensus       259 C~~~~p~~Rpta~eLL~hpf~~~~~~  284 (313)
T KOG0198|consen  259 CFKRDPEKRPTAEELLEHPFLKQNSI  284 (313)
T ss_pred             HhhcCcccCcCHHHHhhChhhhcccc
Confidence            99999999999999999999976443

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.82  E-value=3e-20  Score=122.19  Aligned_cols=101  Identities=26%  Similarity=0.468  Sum_probs=85.2

Q ss_pred             hcccccccccccccccc----CCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH--HHHHHHhCCCC---CCCCCCCHHH
Q 032788           16 KWHVSRWNSLTDQVVNS----KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELP---PIPDSVSRDA   86 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~----~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~--~~~~~~~~~~~---~~~~~~~~~~   86 (133)
                      ...||||+|+|||.+..    ...+|+..+|.|++|+++|.++.|.+||.+.+.  .+..++++.+.   +-+...+...
T Consensus       180 relCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~  259 (411)
T KOG0599|consen  180 RELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATV  259 (411)
T ss_pred             HHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccH
Confidence            45699999999999873    234689999999999999999999999998873  45666777653   3356778899


Q ss_pred             HHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           87 RDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        87 ~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      ++++.+|+..||++|.|++|+|+||||...
T Consensus       260 KdLIsrlLqVdp~~Ritake~LaHpff~q~  289 (411)
T KOG0599|consen  260 KDLISRLLQVDPTKRITAKEALAHPFFIQI  289 (411)
T ss_pred             HHHHHHHHeeCchhcccHHHHhcChHHHHH
Confidence            999999999999999999999999999543

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.81  E-value=7.7e-20  Score=131.65  Aligned_cols=102  Identities=39%  Similarity=0.642  Sum_probs=86.1

Q ss_pred             hhhcccccccccccccccc---CCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC--CCCCCCHHH
Q 032788           14 RRKWHVSRWNSLTDQVVNS---KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP--IPDSVSRDA   86 (133)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~---~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~--~~~~~~~~~   86 (133)
                      ..++++|||+|||||++-.   ++..|+.++||||+|+.+.+|..+.+|-...+  ..+.++.+...+.  .|...+..+
T Consensus       186 kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F  265 (1187)
T KOG0579|consen  186 KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSF  265 (1187)
T ss_pred             hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHH
Confidence            5678999999999999863   34679999999999999999999999988766  5556665544433  366778899


Q ss_pred             HHHHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           87 RDFILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        87 ~~~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      .+|+.+||..||..||++.++++|||+..
T Consensus       266 ~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~  294 (1187)
T KOG0579|consen  266 SDFLKRCLVKNPRNRPPAAQLLKHPFVQN  294 (1187)
T ss_pred             HHHHHHHHhcCCccCCCHHHHhhCccccc
Confidence            99999999999999999999999999974

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.81  E-value=9.6e-20  Score=124.77  Aligned_cols=103  Identities=31%  Similarity=0.465  Sum_probs=84.5

Q ss_pred             hhhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCC--CCCHHHHHH
Q 032788           14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPD--SVSRDARDF   89 (133)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~   89 (133)
                      +.++++||-.|+|||++.+  .+.+.++|.|.+|+++|||+.|..||++.+  +-+..+. ......|.  .++..++++
T Consensus       291 RSnSFVGThEYlAPEvI~G--~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv-~~~l~Fp~~~~vs~~akDL  367 (459)
T KOG0610|consen  291 RSNSFVGTHEYLAPEVIRG--EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIV-GQPLKFPEEPEVSSAAKDL  367 (459)
T ss_pred             cccccccccccccceeeec--CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHh-cCCCcCCCCCcchhHHHHH
Confidence            5567899999999999999  458999999999999999999999999876  3333332 33333332  567889999


Q ss_pred             HHHHcccCCCCCCC----HHHHhhCCCCCCCCCC
Q 032788           90 ILKCLQVNPNDRPT----AAQLMEHPFVKRPLPT  119 (133)
Q Consensus        90 ~~~~l~~~p~~R~s----~~~~l~~~~~~~~~~~  119 (133)
                      |+++|..||++|.-    ++||.+||||++..+.
T Consensus       368 Ir~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWa  401 (459)
T KOG0610|consen  368 IRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWA  401 (459)
T ss_pred             HHHHhccChhhhhccccchHHhhcCccccCCChh
Confidence            99999999999987    8999999999975543

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.81  E-value=3.7e-20  Score=127.87  Aligned_cols=101  Identities=29%  Similarity=0.496  Sum_probs=82.1

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCC---------CCCCCH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI---------PDSVSR   84 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~---------~~~~~~   84 (133)
                      ++++||++|||||++..+..+|+.|+||||+|+...|+.+|..||....  ..+....++..+..         ....++
T Consensus       188 ~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~k  267 (516)
T KOG0582|consen  188 NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSK  267 (516)
T ss_pred             ccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcH
Confidence            7889999999999976656779999999999999999999999998765  33333333333211         123567


Q ss_pred             HHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           85 DARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        85 ~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      .++.++..|+..||++||++++++.|+||++.
T Consensus       268 sf~e~i~~CL~kDP~kRptAskLlkh~FFk~~  299 (516)
T KOG0582|consen  268 SFREMIALCLVKDPSKRPTASKLLKHAFFKKA  299 (516)
T ss_pred             HHHHHHHHHhhcCcccCCCHHHHhccHHHhhc
Confidence            89999999999999999999999999999864

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.81  E-value=3.5e-20  Score=132.28  Aligned_cols=115  Identities=32%  Similarity=0.556  Sum_probs=95.9

Q ss_pred             hhhchhhhhh---hhcccccccccccccccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCC
Q 032788            5 TVEGLGNALR---RKWHVSRWNSLTDQVVNS-KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI   78 (133)
Q Consensus         5 ~~~~~~~~~~---~~~~~gt~~~~aPE~~~~-~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~   78 (133)
                      .+.+||.+..   .++|+|||+|||||++.. ..+.|+.++||||+|+...++..+++|++..+  ..++++..+..+.+
T Consensus       166 KLaDFGSAsi~~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtL  245 (948)
T KOG0577|consen  166 KLADFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTL  245 (948)
T ss_pred             eeccccchhhcCchhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCC
Confidence            3456666553   578999999999999983 12569999999999999999999999998877  67888877766555


Q ss_pred             C-CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCCC
Q 032788           79 P-DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPT  119 (133)
Q Consensus        79 ~-~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~~  119 (133)
                      + ...+..+..|+..|+..-|.+|||.++++.|+|+....+.
T Consensus       246 qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp~  287 (948)
T KOG0577|consen  246 QSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERPP  287 (948)
T ss_pred             CCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCCc
Confidence            4 4578899999999999999999999999999999776554

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.81  E-value=1.8e-19  Score=126.56  Aligned_cols=101  Identities=30%  Similarity=0.432  Sum_probs=80.5

Q ss_pred             hhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHH---HhCCCCCCCCCCCHHHHHH
Q 032788           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKI---ARGELPPIPDSVSRDARDF   89 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~   89 (133)
                      ..+++|||-|+|||++.++  +|+..+|.||+||++||++.|.+||.+..  ..+.++   ......+.....+.+.+++
T Consensus       345 a~StVGTPDYiAPEVll~k--gY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DL  422 (550)
T KOG0605|consen  345 AYSTVGTPDYIAPEVLLGK--GYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDL  422 (550)
T ss_pred             hhcccCCccccchHHHhcC--CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHH
Confidence            3457999999999999994  49999999999999999999999998764  333333   2222223334567999999


Q ss_pred             HHHHcccCCCCCC---CHHHHhhCCCCCCCCC
Q 032788           90 ILKCLQVNPNDRP---TAAQLMEHPFVKRPLP  118 (133)
Q Consensus        90 ~~~~l~~~p~~R~---s~~~~l~~~~~~~~~~  118 (133)
                      |.+|+. ||.+|.   .++||.+||||++.-+
T Consensus       423 I~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W  453 (550)
T KOG0605|consen  423 ITRLLC-DPENRLGSKGAEEIKKHPFFKGVDW  453 (550)
T ss_pred             HHHHhc-CHHHhcCcccHHHHhcCCccccCCc
Confidence            999998 999996   5899999999987544

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.80  E-value=9.2e-20  Score=129.43  Aligned_cols=99  Identities=23%  Similarity=0.381  Sum_probs=85.5

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ..-|||.|||||.+.+  ..|+..+|+||+||++||+..|.+||.... ..+.+.+.......|...+..+..|++.++.
T Consensus       159 sikGtPlYmAPElv~e--~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~~~S~~f~nfl~gLL~  236 (808)
T KOG0597|consen  159 SIKGTPLYMAPELVEE--QPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPSTASSSFVNFLQGLLI  236 (808)
T ss_pred             eccCcccccCHHHHcC--CCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcccccHHHHHHHHHHhh
Confidence            3489999999999998  569999999999999999999999997765 3444445555556677899999999999999


Q ss_pred             cCCCCCCCHHHHhhCCCCCCCC
Q 032788           96 VNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      .||.+|.+..+++.|||.++.+
T Consensus       237 kdP~~RltW~~Ll~HpF~k~~~  258 (808)
T KOG0597|consen  237 KDPAQRLTWTDLLGHPFWKGKI  258 (808)
T ss_pred             cChhhcccHHHHhcChHHhhhh
Confidence            9999999999999999998643

>PTZ00284 protein kinase; Provisional

Probab=99.80  E-value=1.4e-19  Score=129.58  Aligned_cols=103  Identities=25%  Similarity=0.321  Sum_probs=76.0

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC--C---------------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL--P---------------   76 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~--~---------------   76 (133)
                      ...+||+.|+|||++.+  ..|+.++||||+||++|+|++|+.||.+.+  ..+..+.....  +               
T Consensus       303 ~~~~gt~~Y~APE~~~~--~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~  380 (467)
T PTZ00284        303 TAIVSTRHYRSPEVVLG--LGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLL  380 (467)
T ss_pred             ccccCCccccCcHHhhc--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHH
Confidence            34689999999999987  458999999999999999999999997643  11111111000  0               


Q ss_pred             -----C-CC------------------CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCCCC
Q 032788           77 -----P-IP------------------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS  120 (133)
Q Consensus        77 -----~-~~------------------~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~~~  120 (133)
                           . .+                  ......+.+|+.+||..||.+|++++|+++||||.+..+..
T Consensus       381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~~~  448 (467)
T PTZ00284        381 YNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYPEC  448 (467)
T ss_pred             hhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccccCCcc
Confidence                 0 00                  00124567999999999999999999999999999865533

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.79  E-value=1.7e-19  Score=127.43  Aligned_cols=100  Identities=22%  Similarity=0.411  Sum_probs=75.5

Q ss_pred             hccccccccccccccccC---------CCCCCchhHHHHHHHHHHHHHhCCCCCCChHHHHHHHHhCCCC----CCCCCC
Q 032788           16 KWHVSRWNSLTDQVVNSK---------NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELP----PIPDSV   82 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~---------~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~----~~~~~~   82 (133)
                      .+-+||..||+||.+...         +-+.+.++|||||||++|+|..|++||....-.+.++..-..+    ++|..-
T Consensus       519 dsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~  598 (677)
T KOG0596|consen  519 DSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIP  598 (677)
T ss_pred             ccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCC
Confidence            345999999999988631         1124678999999999999999999998766333332221111    233333


Q ss_pred             C-HHHHHHHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           83 S-RDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        83 ~-~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      . .++.+++..||..||.+|+++.++|+|||+..
T Consensus       599 ~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  599 ENDELIDVMKCCLARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             CchHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence            3 34899999999999999999999999999987

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.78  E-value=2.5e-18  Score=119.23  Aligned_cols=102  Identities=31%  Similarity=0.510  Sum_probs=78.4

Q ss_pred             ccccccccccccccccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHHHHHHhCCCCCCCCCCCHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSK---NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WALFKIARGELPPIPDSVSRDARD   88 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~---~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~   88 (133)
                      ...||..|++||++...   ....+.++|+||+|+++|++++|+.||....     .....+........+...+.++.+
T Consensus       227 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  306 (353)
T PLN00034        227 SSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRH  306 (353)
T ss_pred             ccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHH
Confidence            45899999999998531   1123568999999999999999999996422     112222233334456678899999


Q ss_pred             HHHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           89 FILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        89 ~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      ++.+||..||.+|+++.|+++|+|+.+...
T Consensus       307 li~~~l~~~P~~Rpt~~ell~hp~~~~~~~  336 (353)
T PLN00034        307 FISCCLQREPAKRWSAMQLLQHPFILRAQP  336 (353)
T ss_pred             HHHHHccCChhhCcCHHHHhcCcccccCCc
Confidence            999999999999999999999999987643

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.78  E-value=2.7e-19  Score=112.77  Aligned_cols=95  Identities=25%  Similarity=0.255  Sum_probs=72.0

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhCCCCCC------CCCCCH--HH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELPPI------PDSVSR--DA   86 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~~~~~~------~~~~~~--~~   86 (133)
                      ..||+.|+|||++..  ..++.++||||+|+++|++++|..||....   ..+..+........      +.....  .+
T Consensus        64 ~~g~~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (176)
T smart00750       64 SRVDPYFMAPEVIQG--QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSF  141 (176)
T ss_pred             CCCcccccChHHhcC--CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhH
Confidence            478999999999987  458999999999999999999999986543   22222222222111      112222  68


Q ss_pred             HHHHHHHcccCCCCCCCHHHHhhCCCCC
Q 032788           87 RDFILKCLQVNPNDRPTAAQLMEHPFVK  114 (133)
Q Consensus        87 ~~~~~~~l~~~p~~R~s~~~~l~~~~~~  114 (133)
                      .+++.+||..+|.+||++.++++|+|..
T Consensus       142 ~~~i~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      142 ADFMRVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHHHHHHHhcccccccCHHHHHHHHHHH
Confidence            9999999999999999999999998764

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.78  E-value=3.1e-19  Score=122.42  Aligned_cols=97  Identities=25%  Similarity=0.464  Sum_probs=81.1

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ..+||+.|+|||++..  ..++.++|+||+|+++|++++|..||...+ ..............+..++..+.+++.+||.
T Consensus       154 ~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~  231 (323)
T cd05571         154 TFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLAGLLK  231 (323)
T ss_pred             ceecCccccChhhhcC--CCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHcc
Confidence            4589999999999987  458999999999999999999999997654 3333333333445677889999999999999


Q ss_pred             cCCCCCC-----CHHHHhhCCCCCC
Q 032788           96 VNPNDRP-----TAAQLMEHPFVKR  115 (133)
Q Consensus        96 ~~p~~R~-----s~~~~l~~~~~~~  115 (133)
                      .||.+|+     ++.++++|+||..
T Consensus       232 ~dP~~R~~~~~~~~~~ll~h~~f~~  256 (323)
T cd05571         232 KDPKQRLGGGPEDAKEIMEHRFFAS  256 (323)
T ss_pred             CCHHHcCCCCCCCHHHHHcCCCcCC
Confidence            9999999     8999999999975

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.78  E-value=9.8e-20  Score=129.57  Aligned_cols=93  Identities=23%  Similarity=0.378  Sum_probs=77.2

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHHHH---HHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF---KIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      .|+||-.|||||++..  ...+.|+||||+|||+|||++|..||...+....   .-.+..-.+.|..+++.+.-++..|
T Consensus       270 SFaGTVaWMAPEvIrn--ePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqc  347 (904)
T KOG4721|consen  270 SFAGTVAWMAPEVIRN--EPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQC  347 (904)
T ss_pred             hhhhhHhhhCHHHhhc--CCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHHHHHHHH
Confidence            3699999999999998  4489999999999999999999999998763211   1111222355788999999999999


Q ss_pred             cccCCCCCCCHHHHhhCC
Q 032788           94 LQVNPNDRPTAAQLMEHP  111 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~~  111 (133)
                      |.-.|.+||++.+++.|-
T Consensus       348 w~sKpRNRPSFrqil~Hl  365 (904)
T KOG4721|consen  348 WNSKPRNRPSFRQILLHL  365 (904)
T ss_pred             HhcCCCCCccHHHHHHHH
Confidence            999999999999999983

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.77  E-value=1.2e-18  Score=117.52  Aligned_cols=102  Identities=27%  Similarity=0.380  Sum_probs=79.0

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh---------------------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR---------------------   72 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~---------------------   72 (133)
                      +..+-|.+|.|||.+... ..|+...||||+||++.|+++|++-|.+.+  .++..+..                     
T Consensus       185 TeYVaTRWYRAPElll~~-~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~y  263 (359)
T KOG0660|consen  185 TEYVATRWYRAPELLLNS-SEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPY  263 (359)
T ss_pred             hcceeeeeecCHHHHhcc-ccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHH
Confidence            566889999999999763 569999999999999999999999987643  22222211                     


Q ss_pred             --CC--CCCCC-----CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           73 --GE--LPPIP-----DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        73 --~~--~~~~~-----~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                        ..  .+..+     ........+++++||..||.+|+|++|+++|||+....-
T Consensus       264 i~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hd  318 (359)
T KOG0660|consen  264 IKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHD  318 (359)
T ss_pred             HHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcC
Confidence              11  11111     245678999999999999999999999999999987543

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.77  E-value=2.1e-18  Score=122.81  Aligned_cols=100  Identities=22%  Similarity=0.351  Sum_probs=76.3

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC-------------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL-------------------   75 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~-------------------   75 (133)
                      ..+||+.|+|||++.+. ..++.++|+||+||++|+|++|.+||.+..  ..+..+.....                   
T Consensus       229 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~  307 (440)
T PTZ00036        229 SYICSRFYRAPELMLGA-TNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKF  307 (440)
T ss_pred             cCCCCcCccCHHHhcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccC
Confidence            45789999999998753 358999999999999999999999997643  22222211000                   


Q ss_pred             C---------CCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           76 P---------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        76 ~---------~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      +         ..+...+.++.+++.+||..+|.+|+++.|+++||||....
T Consensus       308 ~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~  358 (440)
T PTZ00036        308 PDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR  358 (440)
T ss_pred             CccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence            0         01234567899999999999999999999999999997643

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.77  E-value=2.9e-18  Score=116.52  Aligned_cols=107  Identities=26%  Similarity=0.376  Sum_probs=78.3

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHh--CCCC---------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIAR--GELP---------------   76 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~--~~~~---------------   76 (133)
                      ..+|++.|+|||++... ..++.++|+||+|+++|++++|..||.+..   ..+..+..  +...               
T Consensus       162 ~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (303)
T cd07869         162 NEVVTLWYRPPDVLLGS-TEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKP  240 (303)
T ss_pred             CCcccCCCCChHHHcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcccccc
Confidence            35788999999998653 347889999999999999999999997643   12211111  0000               


Q ss_pred             C-----CC---------CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCCCCCCCC
Q 032788           77 P-----IP---------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP  124 (133)
Q Consensus        77 ~-----~~---------~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~~~~~~~  124 (133)
                      .     .+         ......+.+++.+|+..||.+|+|++++++||||....+..|.++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~~~~~~~~  302 (303)
T cd07869         241 ERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLPPRLWELT  302 (303)
T ss_pred             ccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCChhhhhcc
Confidence            0     00         012356889999999999999999999999999998776666543

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=2.5e-18  Score=116.34  Aligned_cols=96  Identities=27%  Similarity=0.364  Sum_probs=79.1

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..+||+.|+|||.+..  ..++.++|+||+|+++|++++|..||.+..  .....+..+ ....+...+..+.+++.+||
T Consensus       157 ~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~li~~~l  233 (291)
T cd05612         157 TLCGTPEYLAPEVIQS--KGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG-KLEFPRHLDLYAKDLIKKLL  233 (291)
T ss_pred             cccCChhhcCHHHHcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-CcCCCccCCHHHHHHHHHHc
Confidence            3579999999999987  448899999999999999999999997754  223333333 33556677889999999999


Q ss_pred             ccCCCCCCC-----HHHHhhCCCCCC
Q 032788           95 QVNPNDRPT-----AAQLMEHPFVKR  115 (133)
Q Consensus        95 ~~~p~~R~s-----~~~~l~~~~~~~  115 (133)
                      ..||.+|++     +++++.|+||..
T Consensus       234 ~~dp~~R~~~~~~~~~~~l~h~~~~~  259 (291)
T cd05612         234 VVDRTRRLGNMKNGADDVKNHRWFKS  259 (291)
T ss_pred             CCCHHHccCCccCCHHHHhcCccccC
Confidence            999999995     999999999975

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.76  E-value=2e-18  Score=118.11  Aligned_cols=99  Identities=23%  Similarity=0.450  Sum_probs=80.2

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ...+||+.|+|||++.+  ..++.++|+||+|+++|++++|..||.... ...........+..+...+.++.+++..||
T Consensus       154 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  231 (316)
T cd05620         154 STFCGTPDYIAPEILQG--LKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLF  231 (316)
T ss_pred             eccCCCcCccCHHHHcC--CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHc
Confidence            34689999999999987  458999999999999999999999997654 222222233344556678899999999999


Q ss_pred             ccCCCCCCCH-HHHhhCCCCCCC
Q 032788           95 QVNPNDRPTA-AQLMEHPFVKRP  116 (133)
Q Consensus        95 ~~~p~~R~s~-~~~l~~~~~~~~  116 (133)
                      ..||.+|+++ ++++.|+||...
T Consensus       232 ~~dP~~R~~~~~~~~~h~~f~~~  254 (316)
T cd05620         232 ERDPTRRLGVVGNIRGHPFFKTI  254 (316)
T ss_pred             cCCHHHcCCChHHHHcCCCcCCC
Confidence            9999999997 578899999763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=2.7e-19  Score=129.86  Aligned_cols=103  Identities=34%  Similarity=0.693  Sum_probs=85.6

Q ss_pred             hhhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-HHHHHHHhCC---CCCCCCCCCHHHHHH
Q 032788           14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGE---LPPIPDSVSRDARDF   89 (133)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~   89 (133)
                      ...++-||.-|||||++-...++|+.++||||+||.+.||.+|++||.... .+....+-+.   -++.|..++.+.++|
T Consensus       732 ~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~F  811 (1226)
T KOG4279|consen  732 CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNF  811 (1226)
T ss_pred             cccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHH
Confidence            345679999999999998766789999999999999999999999997654 2222222233   356778889999999


Q ss_pred             HHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           90 ILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        90 ~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      +.+|+..+|.+||++.++++.||+...
T Consensus       812 ilrcFepd~~~R~sA~~LL~DpFlq~~  838 (1226)
T KOG4279|consen  812 ILRCFEPDPCDRPSAKDLLQDPFLQHN  838 (1226)
T ss_pred             HHHHcCCCcccCccHHHhccCcccccC
Confidence            999999999999999999999999643

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.76  E-value=2.3e-18  Score=117.86  Aligned_cols=97  Identities=23%  Similarity=0.419  Sum_probs=80.1

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ..+|+..|+|||.+.+  ..++.++|+||+|+++|++++|..||.+.. ..............+..++..+.+++.+||.
T Consensus       155 ~~~g~~~y~aPE~~~~--~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~  232 (318)
T cd05570         155 TFCGTPDYIAPEILSY--QPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPRWLSKEAKSILKSFLT  232 (318)
T ss_pred             ceecCccccCHHHhcC--CCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcc
Confidence            3579999999999987  458999999999999999999999997654 2222222233345566788999999999999


Q ss_pred             cCCCCCCCH-----HHHhhCCCCCC
Q 032788           96 VNPNDRPTA-----AQLMEHPFVKR  115 (133)
Q Consensus        96 ~~p~~R~s~-----~~~l~~~~~~~  115 (133)
                      .||.+|+++     .+++.|+|+..
T Consensus       233 ~dP~~R~s~~~~~~~~ll~~~~~~~  257 (318)
T cd05570         233 KNPEKRLGCLPTGEQDIKGHPFFRE  257 (318)
T ss_pred             CCHHHcCCCCCCCHHHHhcCCCcCC
Confidence            999999999     99999999976

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.76  E-value=3.8e-18  Score=118.19  Aligned_cols=92  Identities=21%  Similarity=0.430  Sum_probs=78.6

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HH-HHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WA-LFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..||+.|||||++.+....|+.|+||||+|+++||+++|+.||.+..  .. ......+..+..+..++..+..++.+||
T Consensus       204 ~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW  283 (362)
T KOG0192|consen  204 VAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCW  283 (362)
T ss_pred             CCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhC
Confidence            69999999999999422469999999999999999999999998765  22 2344467777778889999999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032788           95 QVNPNDRPTAAQLME  109 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~  109 (133)
                      ..||..||++.+++.
T Consensus       284 ~~dp~~RP~f~ei~~  298 (362)
T KOG0192|consen  284 LVDPSRRPSFLEIVS  298 (362)
T ss_pred             CCCCCcCCCHHHHHH
Confidence            999999999988765

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.76  E-value=2.1e-18  Score=113.77  Aligned_cols=87  Identities=32%  Similarity=0.684  Sum_probs=75.3

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCC-CCCCHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIP-DSVSRDARDFILK   92 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   92 (133)
                      .+.+|||+||+||++..  .+|+.++||||+||++|||-.-..||.+.+  .-..++.++..++.| ...+..+..++..
T Consensus       186 ~S~VGTPyYMSPE~i~~--~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~  263 (375)
T KOG0591|consen  186 HSLVGTPYYMSPERIHE--SGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDEHYSTDLRELINM  263 (375)
T ss_pred             HhhcCCCcccCHHHHhc--CCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHH
Confidence            34699999999999998  559999999999999999988899998876  344567777777777 5678899999999


Q ss_pred             HcccCCCCCCCH
Q 032788           93 CLQVNPNDRPTA  104 (133)
Q Consensus        93 ~l~~~p~~R~s~  104 (133)
                      |+..|++.||+.
T Consensus       264 ci~vd~~~RP~t  275 (375)
T KOG0591|consen  264 CIAVDPEQRPDT  275 (375)
T ss_pred             HccCCcccCCCc
Confidence            999999999983

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.76  E-value=1.6e-18  Score=116.89  Aligned_cols=98  Identities=23%  Similarity=0.405  Sum_probs=78.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHHHHHHhCCCCCCCCCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WALFKIARGELPPIPDSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (133)
                      ...||..|+|||++..  ..++.++|+||+|+++|++++|..||.+..     ..............+...+..+.+++.
T Consensus       160 ~~~g~~~y~aPE~~~~--~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~  237 (285)
T cd05631         160 GRVGTVGYMAPEVINN--EKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICR  237 (285)
T ss_pred             CCCCCCCccCHhhhcC--CCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHH
Confidence            4578999999999987  458999999999999999999999997643     122222222233455678899999999


Q ss_pred             HHcccCCCCCCC-----HHHHhhCCCCCCC
Q 032788           92 KCLQVNPNDRPT-----AAQLMEHPFVKRP  116 (133)
Q Consensus        92 ~~l~~~p~~R~s-----~~~~l~~~~~~~~  116 (133)
                      +||..||.+|++     ++++++||||...
T Consensus       238 ~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~  267 (285)
T cd05631         238 MLLTKNPKERLGCRGNGAAGVKQHPIFKNI  267 (285)
T ss_pred             HHhhcCHHHhcCCCCCCHHHHhcCHhhcCC
Confidence            999999999986     8999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.76  E-value=1.4e-18  Score=119.55  Aligned_cols=96  Identities=24%  Similarity=0.393  Sum_probs=79.3

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-H-HHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-W-ALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..+||+.|+|||++..  ..++.++|+||+|+++|++++|..||.+.. . ....+.. .....+...+..+.+++.+||
T Consensus       174 ~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~-~~~~~p~~~~~~~~~li~~~L  250 (329)
T PTZ00263        174 TLCGTPEYLAPEVIQS--KGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILA-GRLKFPNWFDGRARDLVKGLL  250 (329)
T ss_pred             eecCChhhcCHHHHcC--CCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhc-CCcCCCCCCCHHHHHHHHHHh
Confidence            3589999999999987  447899999999999999999999997654 2 2233333 334556678899999999999


Q ss_pred             ccCCCCCCC-----HHHHhhCCCCCC
Q 032788           95 QVNPNDRPT-----AAQLMEHPFVKR  115 (133)
Q Consensus        95 ~~~p~~R~s-----~~~~l~~~~~~~  115 (133)
                      ..||.+|++     +++++.||||.+
T Consensus       251 ~~dP~~R~~~~~~~~~~ll~hp~f~~  276 (329)
T PTZ00263        251 QTDHTKRLGTLKGGVADVKNHPYFHG  276 (329)
T ss_pred             hcCHHHcCCCCCCCHHHHhcCCccCC
Confidence            999999986     799999999975

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=1.6e-18  Score=118.30  Aligned_cols=97  Identities=28%  Similarity=0.468  Sum_probs=79.8

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..+||+.|+|||.+..  ..++.++|+||+|+++|++++|..||.+..  .....+. ......+...+..+.+++.+||
T Consensus       152 ~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L  228 (312)
T cd05585         152 TFCGTPEYLAPELLLG--HGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKIL-QEPLRFPDGFDRDAKDLLIGLL  228 (312)
T ss_pred             cccCCcccCCHHHHcC--CCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHH-cCCCCCCCcCCHHHHHHHHHHc
Confidence            4589999999999987  458999999999999999999999997654  2223332 3334556778899999999999


Q ss_pred             ccCCCCCC---CHHHHhhCCCCCCC
Q 032788           95 QVNPNDRP---TAAQLMEHPFVKRP  116 (133)
Q Consensus        95 ~~~p~~R~---s~~~~l~~~~~~~~  116 (133)
                      ..||.+|+   ++.+++.||||...
T Consensus       229 ~~dp~~R~~~~~~~e~l~hp~~~~~  253 (312)
T cd05585         229 SRDPTRRLGYNGAQEIKNHPFFSQL  253 (312)
T ss_pred             CCCHHHcCCCCCHHHHHcCCCcCCC
Confidence            99999997   57899999999863

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.76  E-value=2.5e-18  Score=117.83  Aligned_cols=97  Identities=24%  Similarity=0.386  Sum_probs=79.7

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ..+||+.|+|||++..  ..++.++|+||+|+++|++++|..||.+.+ ..............+...+..+.+++.+|+.
T Consensus       155 ~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~  232 (320)
T cd05590         155 TFCGTPDYIAPEILQE--MLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLSQDAVDILKAFMT  232 (320)
T ss_pred             ccccCccccCHHHHcC--CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcc
Confidence            4579999999999987  458899999999999999999999997654 2222222333334566788999999999999


Q ss_pred             cCCCCCCCH------HHHhhCCCCCC
Q 032788           96 VNPNDRPTA------AQLMEHPFVKR  115 (133)
Q Consensus        96 ~~p~~R~s~------~~~l~~~~~~~  115 (133)
                      .||.+|+++      ++++.||||..
T Consensus       233 ~dP~~R~~~~~~~~~~~~~~h~~f~~  258 (320)
T cd05590         233 KNPTMRLGSLTLGGEEAILRHPFFKE  258 (320)
T ss_pred             cCHHHCCCCCCCCCHHHHHcCCCcCC
Confidence            999999998      89999999975

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.76  E-value=4.2e-18  Score=116.83  Aligned_cols=97  Identities=24%  Similarity=0.372  Sum_probs=80.3

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...+|++.|+|||.+.+  ..++.++|+||+|+++|++++|..||.+..  .....+... ....+..++..+.+++.+|
T Consensus       159 ~~~~g~~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~li~~~  235 (324)
T cd05589         159 STFCGTPEFLAPEVLTE--TSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVND-EVRYPRFLSREAISIMRRL  235 (324)
T ss_pred             cccccCccccCHhHhcC--CCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHH
Confidence            34689999999999987  458899999999999999999999998754  233333333 3345677889999999999


Q ss_pred             cccCCCCCC-----CHHHHhhCCCCCC
Q 032788           94 LQVNPNDRP-----TAAQLMEHPFVKR  115 (133)
Q Consensus        94 l~~~p~~R~-----s~~~~l~~~~~~~  115 (133)
                      |..||.+|+     +++++++|+||+.
T Consensus       236 L~~dP~~R~~~~~~~~~~l~~~~~f~~  262 (324)
T cd05589         236 LRRNPERRLGSGEKDAEDVKKQPFFRD  262 (324)
T ss_pred             hhcCHhHcCCCCCCCHHHHhhCCCcCC
Confidence            999999998     6999999999975

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.75  E-value=3.9e-18  Score=115.02  Aligned_cols=95  Identities=31%  Similarity=0.468  Sum_probs=73.3

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC-----------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP-----------------   77 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~-----------------   77 (133)
                      ...|++.|+|||.+..  ..++.++|+||+|+++|++++|..||.+..  ..+..+......+                 
T Consensus       168 ~~~~~~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  245 (290)
T cd07862         168 SVVVTLWYRAPEVLLQ--SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFH  245 (290)
T ss_pred             cccccccccChHHHhC--CCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhcc
Confidence            4578999999999976  458889999999999999999999997643  2222222111000                 


Q ss_pred             ---------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           78 ---------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        78 ---------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                               ....++..+.+++.+|+..||.+||++.++++||||
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         246 SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             CCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence                     012356778899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.75  E-value=2.3e-18  Score=118.36  Aligned_cols=97  Identities=26%  Similarity=0.455  Sum_probs=80.3

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ..+||+.|+|||.+..  ..++.++|+||+|+++|++++|..||...+ ..............+..++.++.+++.+||.
T Consensus       154 ~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~  231 (328)
T cd05593         154 TFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRTLSADAKSLLSGLLI  231 (328)
T ss_pred             cccCCcCccChhhhcC--CCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCCCCCCHHHHHHHHHHcC
Confidence            4589999999999987  458999999999999999999999997654 2232233333345677889999999999999


Q ss_pred             cCCCCCC-----CHHHHhhCCCCCC
Q 032788           96 VNPNDRP-----TAAQLMEHPFVKR  115 (133)
Q Consensus        96 ~~p~~R~-----s~~~~l~~~~~~~  115 (133)
                      .||.+|+     +++++++|+||..
T Consensus       232 ~dP~~R~~~~~~~~~~il~h~~~~~  256 (328)
T cd05593         232 KDPNKRLGGGPDDAKEIMRHSFFTG  256 (328)
T ss_pred             CCHHHcCCCCCCCHHHHhcCCCcCC
Confidence            9999997     8999999999975

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.75  E-value=4.6e-18  Score=116.65  Aligned_cols=97  Identities=25%  Similarity=0.454  Sum_probs=79.8

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ..+||+.|+|||.+..  ..++.++|+||+|+++|++++|..||...+ ..............+..++..+.+++.+||.
T Consensus       154 ~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~  231 (323)
T cd05595         154 TFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLK  231 (323)
T ss_pred             cccCCcCcCCcccccC--CCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcc
Confidence            3579999999999987  458999999999999999999999997654 2222222233335567789999999999999


Q ss_pred             cCCCCCC-----CHHHHhhCCCCCC
Q 032788           96 VNPNDRP-----TAAQLMEHPFVKR  115 (133)
Q Consensus        96 ~~p~~R~-----s~~~~l~~~~~~~  115 (133)
                      .||.+|+     ++.++++|+||.+
T Consensus       232 ~dP~~R~~~~~~~~~~~l~h~~~~~  256 (323)
T cd05595         232 KDPKQRLGGGPSDAKEVMEHRFFLS  256 (323)
T ss_pred             CCHHHhCCCCCCCHHHHHcCCCcCC
Confidence            9999998     8999999999976

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.75  E-value=7e-18  Score=113.64  Aligned_cols=95  Identities=26%  Similarity=0.369  Sum_probs=72.1

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCC--------------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGE--------------------   74 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~--------------------   74 (133)
                      ...|+..|+|||++.+  ..++.++|+||+|+++|++++|..||.+..  .....+....                    
T Consensus       160 ~~~~~~~y~aPE~~~~--~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (287)
T cd07848         160 EYVATRWYRSPELLLG--APYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGL  237 (287)
T ss_pred             ccccccccCCcHHHcC--CCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhccc
Confidence            3578999999999987  448899999999999999999999997543  1111111100                    


Q ss_pred             -CCC----------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           75 -LPP----------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        75 -~~~----------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                       .+.          .....+..+.+++.+|+..||.+|++++++++||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         238 RFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             ccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence             000          011356779999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.75  E-value=1.1e-17  Score=110.92  Aligned_cols=95  Identities=23%  Similarity=0.568  Sum_probs=78.7

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ...|++.|+|||....  ..++.++|+||+|++++++++|..||...+  .....+..+..+..+...+..+.+++.+|+
T Consensus       161 ~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  238 (257)
T cd08223         161 TLIGTPYYMSPELFSN--KPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELGELIATML  238 (257)
T ss_pred             cccCCcCccChhHhcC--CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHh
Confidence            3478889999999877  447889999999999999999999987644  233344445444556678899999999999


Q ss_pred             ccCCCCCCCHHHHhhCCCC
Q 032788           95 QVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~~~~  113 (133)
                      ..+|.+||++.++++||||
T Consensus       239 ~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         239 SKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             ccCcccCCCHHHHhcCCCC
Confidence            9999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.75  E-value=1e-17  Score=115.27  Aligned_cols=101  Identities=26%  Similarity=0.433  Sum_probs=76.4

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-HHHHHH-------------------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKI-------------------------   70 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-~~~~~~-------------------------   70 (133)
                      ...|+..|+|||.+.+  ..++.++|+||+|+++|++++|+.||...+ ..+...                         
T Consensus       161 ~~~g~~~y~aPE~~~~--~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (331)
T cd06649         161 SFVGTRSYMSPERLQG--THYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGR  238 (331)
T ss_pred             cCCCCcCcCCHhHhcC--CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccc
Confidence            4579999999999987  458999999999999999999999986432 111111                         


Q ss_pred             ----------------------HhCCCCCC-CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCCC
Q 032788           71 ----------------------ARGELPPI-PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPT  119 (133)
Q Consensus        71 ----------------------~~~~~~~~-~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~~  119 (133)
                                            .....+.. ....+.++.+++.+||..||.+||+++++++|+|++.....
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~~~  310 (331)
T cd06649         239 PVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSEVE  310 (331)
T ss_pred             cccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcccc
Confidence                                  11111111 12356789999999999999999999999999999865443

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.75  E-value=4.7e-18  Score=122.57  Aligned_cols=99  Identities=24%  Similarity=0.433  Sum_probs=83.5

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...+||+.|+|||.+..  ..++.++|+||+|+++|++++|..||.+..  ........+.....+...+..+.+++..|
T Consensus       203 ~~~~Gt~~Y~aPE~~~~--~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  280 (496)
T PTZ00283        203 RTFCGTPYYVAPEIWRR--KPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPPSISPEMQEIVTAL  280 (496)
T ss_pred             ccccCCcceeCHHHhCC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHH
Confidence            34689999999999987  458999999999999999999999997654  33444455555566778899999999999


Q ss_pred             cccCCCCCCCHHHHhhCCCCCCC
Q 032788           94 LQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      |..+|.+||++.+++.|||+...
T Consensus       281 L~~dP~~RPs~~ell~~p~~~~~  303 (496)
T PTZ00283        281 LSSDPKRRPSSSKLLNMPICKLF  303 (496)
T ss_pred             cccChhhCcCHHHHHhCHHHHHh
Confidence            99999999999999999987643

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.75  E-value=4.3e-18  Score=116.49  Aligned_cols=98  Identities=23%  Similarity=0.467  Sum_probs=80.1

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ...+||+.|+|||.+.+  ..++.++|+||+|+++|++++|..||.+.+ ...........+..+...+..+.+++.+||
T Consensus       154 ~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ll~~~l  231 (316)
T cd05592         154 STFCGTPDYIAPEILKG--QKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPRWISKEAKDCLSKLF  231 (316)
T ss_pred             ccccCCccccCHHHHcC--CCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHc
Confidence            34589999999999987  458899999999999999999999997654 222222333445567778899999999999


Q ss_pred             ccCCCCCCCH-HHHhhCCCCCC
Q 032788           95 QVNPNDRPTA-AQLMEHPFVKR  115 (133)
Q Consensus        95 ~~~p~~R~s~-~~~l~~~~~~~  115 (133)
                      ..+|.+|+++ ++++.|+||..
T Consensus       232 ~~~P~~R~~~~~~l~~h~~~~~  253 (316)
T cd05592         232 ERDPTKRLGVDGDIRQHPFFRG  253 (316)
T ss_pred             cCCHHHcCCChHHHHcCcccCC
Confidence            9999999986 47889999975

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.75  E-value=1.9e-18  Score=114.34  Aligned_cols=96  Identities=28%  Similarity=0.486  Sum_probs=82.4

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      +.||||.|+|||++..  .+|+..+|.|++|+++|||+.|.+||...+  ....++.++.. ..|...+..+.+++..++
T Consensus       200 TlCGTPeYLAPEii~s--k~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v-~fP~~fs~~~kdLl~~LL  276 (355)
T KOG0616|consen  200 TLCGTPEYLAPEIIQS--KGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKV-KFPSYFSSDAKDLLKKLL  276 (355)
T ss_pred             EecCCccccChHHhhc--CCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcc-cCCcccCHHHHHHHHHHH
Confidence            3599999999999998  459999999999999999999999998776  34455555543 678889999999999999


Q ss_pred             ccCCCCCC-----CHHHHhhCCCCCC
Q 032788           95 QVNPNDRP-----TAAQLMEHPFVKR  115 (133)
Q Consensus        95 ~~~p~~R~-----s~~~~l~~~~~~~  115 (133)
                      ..|-++|.     -.+++..|+||+.
T Consensus       277 ~vD~t~R~gnlknG~~dIk~H~wF~~  302 (355)
T KOG0616|consen  277 QVDLTKRFGNLKNGVEDIKNHPWFKG  302 (355)
T ss_pred             hhhhHhhhcCcCCCccccccCccccc
Confidence            99999993     4678999999985

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.75  E-value=1.9e-18  Score=121.11  Aligned_cols=85  Identities=27%  Similarity=0.506  Sum_probs=76.8

Q ss_pred             cccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccCC
Q 032788           22 WNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQVNP   98 (133)
Q Consensus        22 ~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p   98 (133)
                      ..|.|||.++.  ..++.++||||+|+++||+++ |..|+.+..  +.+..+.++...+.|..++..+.++|..||+.+|
T Consensus       368 IkWtAPEa~~~--~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P  445 (468)
T KOG0197|consen  368 IKWTAPEALNY--GKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEGCPDEVYELMKSCWHEDP  445 (468)
T ss_pred             ceecCHHHHhh--CCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCc
Confidence            57999999999  459999999999999999987 888887654  7788889999999999999999999999999999


Q ss_pred             CCCCCHHHHh
Q 032788           99 NDRPTAAQLM  108 (133)
Q Consensus        99 ~~R~s~~~~l  108 (133)
                      ++|||++.+.
T Consensus       446 ~~RPtF~~L~  455 (468)
T KOG0197|consen  446 EDRPTFETLR  455 (468)
T ss_pred             ccCCCHHHHH
Confidence            9999998664

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.75  E-value=8.1e-18  Score=117.37  Aligned_cols=100  Identities=31%  Similarity=0.537  Sum_probs=84.3

Q ss_pred             hhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC---CCCCCCCCHHHHHH
Q 032788           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL---PPIPDSVSRDARDF   89 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~   89 (133)
                      ....|||+.|+|||++..  ..|+..+|+||+|+++|.|+.|..||.+..  .....+..+..   ...+..++..+.++
T Consensus       195 ~~~~~Gtp~y~APEvl~~--~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~  272 (382)
T KOG0032|consen  195 LHTIVGTPEYVAPEVLGG--RPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDF  272 (382)
T ss_pred             EeeecCCccccCchhhcC--CCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHH
Confidence            345699999999999997  459999999999999999999999998865  33444444432   33456778999999


Q ss_pred             HHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           90 ILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        90 ~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      +..++..||..|.++.++++|||+...
T Consensus       273 i~~ll~~dp~~R~ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  273 IRKLLEFDPRKRLTAAQALQHPWIKSI  299 (382)
T ss_pred             HHHhcccCcccCCCHHHHhcCccccCC
Confidence            999999999999999999999999875

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.75  E-value=2.7e-18  Score=121.27  Aligned_cols=99  Identities=18%  Similarity=0.370  Sum_probs=86.3

Q ss_pred             hhhccccccccccccccccCCCCCC-chhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHH
Q 032788           14 RRKWHVSRWNSLTDQVVNSKNGGYG-LPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFI   90 (133)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~~-~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (133)
                      ..+++||+..|-|||++.+  +.|+ .++||||+||++|.+..|..||...+  +-+..+....+ ..|..+++++.++|
T Consensus       174 kL~TsCGSLAYSAPEILLG--DsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKY-tvPshvS~eCrdLI  250 (864)
T KOG4717|consen  174 KLTTSCGSLAYSAPEILLG--DSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKY-TVPSHVSKECRDLI  250 (864)
T ss_pred             hhhcccchhhccCchhhhc--CccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccc-cCchhhhHHHHHHH
Confidence            4678899999999999998  4474 58999999999999999999998765  55666654443 66888999999999


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      ..|+..||.+|.+.++|..++|++.
T Consensus       251 ~sMLvRdPkkRAslEeI~s~~Wlq~  275 (864)
T KOG4717|consen  251 QSMLVRDPKKRASLEEIVSTSWLQA  275 (864)
T ss_pred             HHHHhcCchhhccHHHHhccccccC
Confidence            9999999999999999999999975

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.75  E-value=7.8e-19  Score=116.59  Aligned_cols=110  Identities=24%  Similarity=0.416  Sum_probs=88.6

Q ss_pred             hhhchhhhhhhh------ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH------HHHHHHHh
Q 032788            5 TVEGLGNALRRK------WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE------WALFKIAR   72 (133)
Q Consensus         5 ~~~~~~~~~~~~------~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~------~~~~~~~~   72 (133)
                      .+.+||.++..+      +-|-|++|.|||++..+  +|+..+|+||+||++|.++.|.+||-...      ....++..
T Consensus       204 KLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~e--KydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~  281 (400)
T KOG0604|consen  204 KLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPE--KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRT  281 (400)
T ss_pred             EecccccccccCCCccccCCcccccccCHHHhCch--hcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhc
Confidence            455666666543      44999999999999884  49999999999999999999999995432      33445555


Q ss_pred             CCCC---CCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           73 GELP---PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        73 ~~~~---~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      +.+.   +-+.+++...+++++.+|..+|++|.++++++.|||....
T Consensus       282 gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~  328 (400)
T KOG0604|consen  282 GQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQY  328 (400)
T ss_pred             cCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccc
Confidence            5542   2246788999999999999999999999999999999765

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.75  E-value=5.5e-18  Score=116.00  Aligned_cols=98  Identities=24%  Similarity=0.455  Sum_probs=79.0

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ..+||..|+|||++..  ..++.++|+||+|+++|++++|..||.+.+ ...........+..+...+..+.+++.+||.
T Consensus       155 ~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~  232 (316)
T cd05619         155 TFCGTPDYIAPEILLG--QKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPRWLTREAKDILVKLFV  232 (316)
T ss_pred             eecCCccccCHHHHcC--CCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHhc
Confidence            4578999999999987  458999999999999999999999997654 2222222223334556688899999999999


Q ss_pred             cCCCCCCCHH-HHhhCCCCCCC
Q 032788           96 VNPNDRPTAA-QLMEHPFVKRP  116 (133)
Q Consensus        96 ~~p~~R~s~~-~~l~~~~~~~~  116 (133)
                      .+|.+|+++. ++++||||...
T Consensus       233 ~~P~~R~~~~~~l~~h~~~~~~  254 (316)
T cd05619         233 REPERRLGVKGDIRQHPFFREI  254 (316)
T ss_pred             cCHhhcCCChHHHHcCcccCCC
Confidence            9999999996 89999999763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.75  E-value=1.2e-17  Score=116.01  Aligned_cols=101  Identities=24%  Similarity=0.392  Sum_probs=74.8

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH--HHHHHH----------------------h
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIA----------------------R   72 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~--~~~~~~----------------------~   72 (133)
                      ...||..|+|||.+.+  ..++.++|+||+|+++|++++|..||.+.+.  .+....                      .
T Consensus       181 ~~~~t~~y~aPE~~~~--~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (359)
T cd07876         181 PYVVTRYYRAPEVILG--MGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVE  258 (359)
T ss_pred             CCcccCCCCCchhccC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHh
Confidence            3578999999999987  4588999999999999999999999975431  110000                      0


Q ss_pred             CC--CC-----------------CCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCCC
Q 032788           73 GE--LP-----------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPT  119 (133)
Q Consensus        73 ~~--~~-----------------~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~~  119 (133)
                      ..  ..                 ......+..+.+++.+||..||.+|+++.|+++|||+..+...
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~  324 (359)
T cd07876         259 NRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDP  324 (359)
T ss_pred             hCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhhcCc
Confidence            00  00                 0011234678999999999999999999999999999865443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.74  E-value=8.9e-18  Score=116.84  Aligned_cols=99  Identities=24%  Similarity=0.332  Sum_probs=73.8

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC-------------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL-------------------   75 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~-------------------   75 (133)
                      ...||..|+|||.+.+  ..++.++|+||+|+++|++++|..||.+.+  .....+.....                   
T Consensus       184 ~~~~t~~y~aPE~~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (364)
T cd07875         184 PYVVTRYYRAPEVILG--MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE  261 (364)
T ss_pred             CCcccCCcCCHHHHhC--CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHh
Confidence            4578999999999987  458999999999999999999999997543  11111111000                   


Q ss_pred             --CC--------------------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           76 --PP--------------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        76 --~~--------------------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                        +.                    ........+.+++.+|+..||.+|+|++++++|||+..+.
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~~  325 (364)
T cd07875         262 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY  325 (364)
T ss_pred             hCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccccc
Confidence              00                    0111245688999999999999999999999999997643

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.74  E-value=5.3e-18  Score=116.59  Aligned_cols=101  Identities=25%  Similarity=0.290  Sum_probs=73.6

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHH-----------------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIA-----------------------   71 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~-----------------------   71 (133)
                      ..+||..|+|||++......++.++|+||+|+++|++++|+.||.+..  ..+..+.                       
T Consensus       165 ~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  244 (338)
T cd07859         165 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYL  244 (338)
T ss_pred             CCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHH
Confidence            357999999999986422347889999999999999999999986532  1110000                       


Q ss_pred             hCCCCCC-------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           72 RGELPPI-------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        72 ~~~~~~~-------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      .......       ....+..+.+++.+||..+|.+||+++++++||||....
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~  297 (338)
T cd07859         245 SSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLA  297 (338)
T ss_pred             HhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcC
Confidence            0000000       123566788999999999999999999999999997643

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.74  E-value=2.1e-18  Score=116.07  Aligned_cols=101  Identities=25%  Similarity=0.435  Sum_probs=88.8

Q ss_pred             hhhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-HHHHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ..+++||||.|+|||++..  ..|+..+|.|.+|+++|||+.|+.||...+ ..+..++.......|..++++...++..
T Consensus       324 t~kTFCGTPEYLAPEVleD--nDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr~ls~eAktLLsG  401 (516)
T KOG0690|consen  324 TTKTFCGTPEYLAPEVLED--NDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPRTLSPEAKTLLSG  401 (516)
T ss_pred             eeccccCChhhcCchhhcc--ccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCccCCHHHHHHHHH
Confidence            3467899999999999998  459999999999999999999999998765 5666666666678899999999999999


Q ss_pred             HcccCCCCCC-----CHHHHhhCCCCCCC
Q 032788           93 CLQVNPNDRP-----TAAQLMEHPFVKRP  116 (133)
Q Consensus        93 ~l~~~p~~R~-----s~~~~l~~~~~~~~  116 (133)
                      ++..||.+|.     ++.++.+|+||...
T Consensus       402 LL~kdP~kRLGgGpdDakEi~~h~FF~~v  430 (516)
T KOG0690|consen  402 LLKKDPKKRLGGGPDDAKEIMRHRFFASV  430 (516)
T ss_pred             HhhcChHhhcCCCchhHHHHHhhhhhccC
Confidence            9999999995     68899999999864

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=1.6e-17  Score=110.42  Aligned_cols=95  Identities=38%  Similarity=0.615  Sum_probs=77.1

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HH-HHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WA-LFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...|+..|+|||.+..  ..++.++|+||+|+++|++++|+.||....  .. ............+...+..+.+++..|
T Consensus       166 ~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  243 (263)
T cd06625         166 SVTGTPYWMSPEVISG--EGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRT  243 (263)
T ss_pred             CCCcCccccCcceecc--CCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHHHHH
Confidence            3467889999999987  348899999999999999999999986643  11 222222333455667889999999999


Q ss_pred             cccCCCCCCCHHHHhhCCCC
Q 032788           94 LQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~~~~  113 (133)
                      |..+|.+||+++++++|+||
T Consensus       244 l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         244 FVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             hhcCcccCCCHHHHhhCCCC
Confidence            99999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.74  E-value=6.6e-18  Score=115.85  Aligned_cols=96  Identities=28%  Similarity=0.507  Sum_probs=79.8

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..+||+.|+|||.+..  ..++.++|+||+|+++|++++|..||...+  .....+..+ ....+..++..+.+++.+|+
T Consensus       159 ~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l  235 (323)
T cd05584         159 TFCGTIEYMAPEILMR--SGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKG-KLNLPPYLTPEARDLLKKLL  235 (323)
T ss_pred             ccCCCccccChhhccC--CCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHc
Confidence            3579999999999987  447889999999999999999999997754  233333333 33556778899999999999


Q ss_pred             ccCCCCCC-----CHHHHhhCCCCCC
Q 032788           95 QVNPNDRP-----TAAQLMEHPFVKR  115 (133)
Q Consensus        95 ~~~p~~R~-----s~~~~l~~~~~~~  115 (133)
                      ..+|.+|+     ++++++.|+||..
T Consensus       236 ~~~p~~R~~~~~~~~~~l~~h~~~~~  261 (323)
T cd05584         236 KRNPSSRLGAGPGDAAEVQSHPFFRH  261 (323)
T ss_pred             ccCHhHcCCCCCCCHHHHhcCCCcCC
Confidence            99999999     8999999999975

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.74  E-value=4.8e-18  Score=116.81  Aligned_cols=98  Identities=28%  Similarity=0.493  Sum_probs=78.8

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHHHHHHhCCCCCCCCCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WALFKIARGELPPIPDSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (133)
                      ..+||+.|+|||.+.+. ..++.++|+||+|+++|++++|..||....     ..+........+..+...+..+.+++.
T Consensus       165 ~~~gt~~y~aPE~~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  243 (332)
T cd05614         165 SFCGTIEYMAPEIIRGK-GGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFIGPEAQDLLH  243 (332)
T ss_pred             cccCCccccCHHHhcCC-CCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Confidence            45899999999999753 336889999999999999999999996421     222222333444566778899999999


Q ss_pred             HHcccCCCCCC-----CHHHHhhCCCCCC
Q 032788           92 KCLQVNPNDRP-----TAAQLMEHPFVKR  115 (133)
Q Consensus        92 ~~l~~~p~~R~-----s~~~~l~~~~~~~  115 (133)
                      +||..||.+|+     +++++++|+||+.
T Consensus       244 ~~l~~dp~~R~~~~~~~~~~~l~h~~~~~  272 (332)
T cd05614         244 KLLRKDPKKRLGAGPQGASEIKEHPFFKG  272 (332)
T ss_pred             HHcCCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence            99999999999     8899999999975

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.74  E-value=8.3e-18  Score=108.41  Aligned_cols=100  Identities=26%  Similarity=0.413  Sum_probs=85.2

Q ss_pred             hhhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-HHHHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ...+.|||.-|.+||++++  ..++..+|+|++|++.|+++.|.+||.... ....+-+.......|..++.++.+++.+
T Consensus       178 kR~tlcgt~dyl~pEmv~~--~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p~~is~~a~dlI~~  255 (281)
T KOG0580|consen  178 KRKTLCGTLDYLPPEMVEG--RGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFPSTISGGAADLISR  255 (281)
T ss_pred             CceeeecccccCCHhhcCC--CCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCCcccChhHHHHHHH
Confidence            4467899999999999998  558999999999999999999999998754 3333333344446678999999999999


Q ss_pred             HcccCCCCCCCHHHHhhCCCCCC
Q 032788           93 CLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      |+..+|.+|....|++.|||...
T Consensus       256 ll~~~p~~r~~l~~v~~hpwI~a  278 (281)
T KOG0580|consen  256 LLVKNPIERLALTEVMDHPWIVA  278 (281)
T ss_pred             HhccCccccccHHHHhhhHHHHh
Confidence            99999999999999999999864

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.74  E-value=9.4e-18  Score=115.09  Aligned_cols=96  Identities=23%  Similarity=0.370  Sum_probs=79.4

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..+||+.|+|||++.+  ..++.++|+||+|+++|++++|..||.+..  .....+. ......+...+..+.+++.+|+
T Consensus       160 ~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~li~~~l  236 (324)
T cd05587         160 TFCGTPDYIAPEIIAY--QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIM-EHNVSYPKSLSKEAVSICKGLL  236 (324)
T ss_pred             eecCCccccChhhhcC--CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCHHHHHHHHHHh
Confidence            4579999999999987  448899999999999999999999997654  2233333 3334556778899999999999


Q ss_pred             ccCCCCCCCH-----HHHhhCCCCCC
Q 032788           95 QVNPNDRPTA-----AQLMEHPFVKR  115 (133)
Q Consensus        95 ~~~p~~R~s~-----~~~l~~~~~~~  115 (133)
                      ..+|.+|++.     +++++||||..
T Consensus       237 ~~~P~~R~~~~~~~~~~~~~hp~~~~  262 (324)
T cd05587         237 TKHPAKRLGCGPTGERDIREHAFFRR  262 (324)
T ss_pred             hcCHHHcCCCCCCCHHHHhcCCCcCC
Confidence            9999999976     89999999975

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.74  E-value=6.2e-18  Score=115.88  Aligned_cols=96  Identities=21%  Similarity=0.331  Sum_probs=79.3

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..+||+.|+|||.+..  ..++.++|+||+|+++|++++|..||....  .....+. ......+..++.++.+++.+|+
T Consensus       155 ~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~-~~~~~~p~~~~~~~~~ll~~~L  231 (321)
T cd05591         155 TFCGTPDYIAPEILQE--LEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESIL-HDDVLYPVWLSKEAVSILKAFM  231 (321)
T ss_pred             ccccCccccCHHHHcC--CCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCHHHHHHHHHHh
Confidence            4579999999999987  458899999999999999999999997764  2233333 2233456668899999999999


Q ss_pred             ccCCCCCC-------CHHHHhhCCCCCC
Q 032788           95 QVNPNDRP-------TAAQLMEHPFVKR  115 (133)
Q Consensus        95 ~~~p~~R~-------s~~~~l~~~~~~~  115 (133)
                      ..+|.+|+       ++++++.||||..
T Consensus       232 ~~dp~~R~~~~~~~~~~~~~~~hp~~~~  259 (321)
T cd05591         232 TKNPNKRLGCVASQGGEDAIKQHPFFKE  259 (321)
T ss_pred             ccCHHHcCCCCCCCCCHHHHhcCCccCC
Confidence            99999999       8999999999975

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.73  E-value=6.4e-18  Score=116.80  Aligned_cols=96  Identities=23%  Similarity=0.411  Sum_probs=79.5

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH--HHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..+||+.|+|||++..  ..++.++|+||+|+++|++++|..||.+...  ....+..+ ....+...+..+.+++.+|+
T Consensus       187 ~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~li~~~l  263 (340)
T PTZ00426        187 TLCGTPEYIAPEILLN--VGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEG-IIYFPKFLDNNCKHLMKKLL  263 (340)
T ss_pred             eecCChhhcCHHHHhC--CCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcC-CCCCCCCCCHHHHHHHHHHc
Confidence            4589999999999987  4478999999999999999999999987652  23333333 33456678889999999999


Q ss_pred             ccCCCCCC-----CHHHHhhCCCCCC
Q 032788           95 QVNPNDRP-----TAAQLMEHPFVKR  115 (133)
Q Consensus        95 ~~~p~~R~-----s~~~~l~~~~~~~  115 (133)
                      ..+|.+|+     +++++++||||..
T Consensus       264 ~~dp~~R~~~~~~~~~~~~~hp~f~~  289 (340)
T PTZ00426        264 SHDLTKRYGNLKKGAQNVKEHPWFGN  289 (340)
T ss_pred             ccCHHHcCCCCCCCHHHHHcCCCcCC
Confidence            99999995     8999999999985

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=1.9e-17  Score=110.83  Aligned_cols=98  Identities=31%  Similarity=0.595  Sum_probs=78.7

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCC-CCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDS-VSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   93 (133)
                      ...|+..|++||.+..  ..++.++|+|++|+++|++++|..||...+  .....+.....+..... .+..+.+++.+|
T Consensus       157 ~~~~~~~y~~PE~~~~--~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  234 (274)
T cd06609         157 TFVGTPFWMAPEVIKQ--SGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDFVSLC  234 (274)
T ss_pred             cccCCccccChhhhcc--CCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCcccccCHHHHHHHHHH
Confidence            4578888999999987  348999999999999999999999997644  22333333333333333 678899999999


Q ss_pred             cccCCCCCCCHHHHhhCCCCCCC
Q 032788           94 LQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      |..+|.+||++++++.|+|+.+.
T Consensus       235 l~~~p~~Rpt~~~il~~~~~~~~  257 (274)
T cd06609         235 LNKDPKERPSAKELLKHKFIKKA  257 (274)
T ss_pred             hhCChhhCcCHHHHhhChhhcCC
Confidence            99999999999999999999764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.73  E-value=1.2e-17  Score=114.04  Aligned_cols=96  Identities=23%  Similarity=0.283  Sum_probs=69.7

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----------HHHHHHHhCCC----------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----------WALFKIARGEL----------   75 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----------~~~~~~~~~~~----------   75 (133)
                      ..+||+.|+|||++.+. ..++.++|+||+|+++|++++|..||....           ..+..+.....          
T Consensus       174 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (317)
T cd07868         174 PVVVTFWYRAPELLLGA-RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDI  252 (317)
T ss_pred             CccccccccCCHHHcCC-CCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHH
Confidence            45889999999998763 347899999999999999999999985321           11111100000          


Q ss_pred             ---CC------------------------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           76 ---PP------------------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        76 ---~~------------------------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                         +.                        ........+.+++.+|+..||.+|+|++|+++||||
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         253 KKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             hhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence               00                        001123467899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.73  E-value=1.2e-17  Score=112.43  Aligned_cols=98  Identities=18%  Similarity=0.291  Sum_probs=77.3

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHHHHHHhCCCCCCCCCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WALFKIARGELPPIPDSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (133)
                      ...||+.|+|||.+..  ..++.++|+||+|+++|++++|..||....     ..............+...+..+.+++.
T Consensus       156 ~~~g~~~y~aPE~~~~--~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  233 (280)
T cd05608         156 GYAGTPGFMAPELLQG--EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCE  233 (280)
T ss_pred             ccCCCcCccCHHHhcC--CCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHH
Confidence            3578999999999987  458899999999999999999999997542     111111112222345567889999999


Q ss_pred             HHcccCCCCCC-----CHHHHhhCCCCCCC
Q 032788           92 KCLQVNPNDRP-----TAAQLMEHPFVKRP  116 (133)
Q Consensus        92 ~~l~~~p~~R~-----s~~~~l~~~~~~~~  116 (133)
                      .||..||.+|+     +++++++||||+..
T Consensus       234 ~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~  263 (280)
T cd05608         234 ALLAKDPEKRLGFRDGNCDGLRTHPLFRDL  263 (280)
T ss_pred             HHhcCCHHHhcCCCCCCHHHHhcChhhhcC
Confidence            99999999999     78999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.73  E-value=1.1e-17  Score=115.04  Aligned_cols=97  Identities=24%  Similarity=0.420  Sum_probs=78.7

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH----------HHHHHHHhCCCCCCCCCCCHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----------WALFKIARGELPPIPDSVSRDA   86 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~----------~~~~~~~~~~~~~~~~~~~~~~   86 (133)
                      ..+||..|+|||++..  ..++.++|+||+|+++|++++|..||....          ..............+..++..+
T Consensus       155 ~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  232 (329)
T cd05588         155 TFCGTPNYIAPEILRG--EDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKA  232 (329)
T ss_pred             cccCCccccCHHHHcC--CCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHH
Confidence            4689999999999987  458899999999999999999999995211          1222233333445677788999


Q ss_pred             HHHHHHHcccCCCCCCC------HHHHhhCCCCCC
Q 032788           87 RDFILKCLQVNPNDRPT------AAQLMEHPFVKR  115 (133)
Q Consensus        87 ~~~~~~~l~~~p~~R~s------~~~~l~~~~~~~  115 (133)
                      .+++.+|+..||.+|++      ++++++||||..
T Consensus       233 ~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~  267 (329)
T cd05588         233 SSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN  267 (329)
T ss_pred             HHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence            99999999999999987      789999999975

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.73  E-value=2.4e-17  Score=109.13  Aligned_cols=95  Identities=25%  Similarity=0.451  Sum_probs=78.8

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ...|++.|++||+...  ..++.++|+||+|+++|++++|..||....  .....+..+..+..+...+..+.+++.+||
T Consensus       160 ~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  237 (256)
T cd08529         160 TIVGTPYYLSPELCED--KPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCL  237 (256)
T ss_pred             ccccCccccCHHHhcC--CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHc
Confidence            3478889999999987  447889999999999999999999997654  333444445555555577889999999999


Q ss_pred             ccCCCCCCCHHHHhhCCCC
Q 032788           95 QVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~~~~  113 (133)
                      ..+|++||++.++++|+|+
T Consensus       238 ~~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         238 TKDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             cCCcccCcCHHHHhhCCCC
Confidence            9999999999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.73  E-value=2.1e-17  Score=110.38  Aligned_cols=97  Identities=31%  Similarity=0.523  Sum_probs=74.0

Q ss_pred             ccccccccccccccccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCChHH--HHHHHHhC-CCCCCCCCCCHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSK---NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARG-ELPPIPDSVSRDARDFI   90 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~---~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~   90 (133)
                      ...|+..|++||++...   ...++.++|+||+|+++|++++|..||.....  ........ .........+..+.+++
T Consensus       170 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  249 (272)
T cd06637         170 TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFI  249 (272)
T ss_pred             cccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHH
Confidence            45788999999998631   13478899999999999999999999865432  11211111 11122345678999999


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                      .+||..+|.+||++.+++.||||
T Consensus       250 ~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         250 ESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             HHHcCCChhhCCCHHHHhhCCCC
Confidence            99999999999999999999997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.73  E-value=3.2e-17  Score=109.29  Aligned_cols=94  Identities=40%  Similarity=0.698  Sum_probs=78.4

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ..|+..|++||.+..  ..++.++|+|++|+++|++++|..||....  ...........+..+...+..+.+++.+||.
T Consensus       172 ~~~~~~y~~pe~~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  249 (267)
T cd06628         172 LQGSVFWMAPEVVKQ--TSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIPSNISSEAIDFLEKTFE  249 (267)
T ss_pred             cCCCcCccChhHhcc--CCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCCCcCCcccCHHHHHHHHHHcc
Confidence            467889999999876  447889999999999999999999997654  2333333444555667788999999999999


Q ss_pred             cCCCCCCCHHHHhhCCCC
Q 032788           96 VNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~~~~  113 (133)
                      .+|.+||++.++++|+||
T Consensus       250 ~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         250 IDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             CCchhCcCHHHHhhCCCC
Confidence            999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.73  E-value=2.3e-17  Score=114.42  Aligned_cols=99  Identities=25%  Similarity=0.350  Sum_probs=73.8

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCC--------------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGE--------------------   74 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~--------------------   74 (133)
                      ...||..|+|||.+.+  ..++.++|+||+|+++|++++|..||.+.+  ..........                    
T Consensus       177 ~~~~t~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (355)
T cd07874         177 PYVVTRYYRAPEVILG--MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE  254 (355)
T ss_pred             CccccCCccCHHHHcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHh
Confidence            4578999999999987  458999999999999999999999997543  1111100000                    


Q ss_pred             -CC--------------------CCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           75 -LP--------------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        75 -~~--------------------~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                       .+                    ..+......+.+++.+|+..||.+|||++|+++|||+....
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~  318 (355)
T cd07874         255 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVWY  318 (355)
T ss_pred             cCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhccc
Confidence             00                    00112345678999999999999999999999999998654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.73  E-value=2.5e-17  Score=112.23  Aligned_cols=110  Identities=22%  Similarity=0.329  Sum_probs=82.2

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC---------------------C
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG---------------------E   74 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~---------------------~   74 (133)
                      ..++..|+|||.+... ..++.++|+||+|+++|++++|..||.+..  .....+...                     .
T Consensus       164 ~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (309)
T cd07872         164 EVVTLWYRPPDVLLGS-SEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYN  242 (309)
T ss_pred             ccccccccCCHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhh
Confidence            4678899999998753 347889999999999999999999996543  111111100                     0


Q ss_pred             CCC--------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCCCCCCCCcccc
Q 032788           75 LPP--------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHH  128 (133)
Q Consensus        75 ~~~--------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~~~~~~~~~~~  128 (133)
                      .+.        ....++.++.+++.+|+..||.+|+++++++.|+||+........+|.+.+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~~~~~~~~~~  304 (309)
T cd07872         243 FPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLGTRIHSLPESIS  304 (309)
T ss_pred             cCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcccccccCCccee
Confidence            000        012356788999999999999999999999999999987777777776554

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.73  E-value=1.6e-18  Score=118.91  Aligned_cols=97  Identities=24%  Similarity=0.452  Sum_probs=80.8

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ..+||+.|+|||++..  ..++.++|+||+|+++|++++|..||.+.. ..............+...+..+.+++.+||.
T Consensus       155 ~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~  232 (325)
T cd05594         155 TFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLSGLLK  232 (325)
T ss_pred             cccCCcccCCHHHHcc--CCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhh
Confidence            4579999999999987  458999999999999999999999997654 3333333333445677789999999999999


Q ss_pred             cCCCCCC-----CHHHHhhCCCCCC
Q 032788           96 VNPNDRP-----TAAQLMEHPFVKR  115 (133)
Q Consensus        96 ~~p~~R~-----s~~~~l~~~~~~~  115 (133)
                      .||.+|+     ++.++++|+||.+
T Consensus       233 ~dP~~R~~~~~~~~~~il~h~~~~~  257 (325)
T cd05594         233 KDPKQRLGGGPDDAKEIMQHKFFAG  257 (325)
T ss_pred             cCHHHhCCCCCCCHHHHhcCCCcCC
Confidence            9999997     8999999999985

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.73  E-value=1.5e-17  Score=109.58  Aligned_cols=105  Identities=30%  Similarity=0.511  Sum_probs=86.6

Q ss_pred             hhhhccccccccccccccccC-CCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhCCCCCCC--CCCCHHH
Q 032788           13 LRRKWHVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELPPIP--DSVSRDA   86 (133)
Q Consensus        13 ~~~~~~~gt~~~~aPE~~~~~-~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~~~~~~~--~~~~~~~   86 (133)
                      +..+...|-+.|||||++-.. ...|+..+|+||+|+.++|+.+|..||.+++   +.+.++.+...+.++  ...++.+
T Consensus       246 kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F  325 (391)
T KOG0983|consen  246 KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDF  325 (391)
T ss_pred             cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHH
Confidence            344556888999999999753 3569999999999999999999999999876   556666655444444  3478999


Q ss_pred             HHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           87 RDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        87 ~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      .+|+..||..|+++||.-.++++|+|...+-
T Consensus       326 ~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye  356 (391)
T KOG0983|consen  326 QSFVKDCLTKDHRKRPKYNKLLEHPFIKRYE  356 (391)
T ss_pred             HHHHHHHhhcCcccCcchHHHhcCcceeecc
Confidence            9999999999999999999999999987643

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.73  E-value=1.1e-17  Score=114.71  Aligned_cols=96  Identities=21%  Similarity=0.349  Sum_probs=79.3

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..+||+.|+|||++..  ..++.++|+||+|+++|++++|..||.+..  .....+.. .....+...+.++.+++.+|+
T Consensus       160 ~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~-~~~~~p~~~s~~~~~li~~~l  236 (323)
T cd05616         160 TFCGTPDYIAPEIIAY--QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME-HNVAYPKSMSKEAVAICKGLM  236 (323)
T ss_pred             cCCCChhhcCHHHhcC--CCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHh-CCCCCCCcCCHHHHHHHHHHc
Confidence            4689999999999987  458999999999999999999999998754  22333333 333556778899999999999


Q ss_pred             ccCCCCCCC-----HHHHhhCCCCCC
Q 032788           95 QVNPNDRPT-----AAQLMEHPFVKR  115 (133)
Q Consensus        95 ~~~p~~R~s-----~~~~l~~~~~~~  115 (133)
                      ..+|.+|++     .+++++|+||+.
T Consensus       237 ~~~p~~R~~~~~~~~~~i~~h~~~~~  262 (323)
T cd05616         237 TKHPGKRLGCGPEGERDIKEHAFFRY  262 (323)
T ss_pred             ccCHHhcCCCCCCCHHHHhcCCCcCC
Confidence            999999997     489999999974

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.73  E-value=1.4e-17  Score=119.66  Aligned_cols=97  Identities=29%  Similarity=0.450  Sum_probs=81.3

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...+||+.|+|||.+..  ..++.++|+||+|+++|++++|..||.+..  .....+..+.....+..++..+.+++.+|
T Consensus       229 ~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~  306 (478)
T PTZ00267        229 SSFCGTPYYLAPELWER--KRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFPCPVSSGMKALLDPL  306 (478)
T ss_pred             cccCCCccccCHhHhCC--CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCccCCHHHHHHHHHH
Confidence            34579999999999987  458999999999999999999999997654  33444444555555667889999999999


Q ss_pred             cccCCCCCCCHHHHhhCCCCC
Q 032788           94 LQVNPNDRPTAAQLMEHPFVK  114 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~~~~~  114 (133)
                      |..+|.+||++++++.|+|++
T Consensus       307 L~~dP~~Rps~~~~l~~~~~~  327 (478)
T PTZ00267        307 LSKNPALRPTTQQLLHTEFLK  327 (478)
T ss_pred             hccChhhCcCHHHHHhCHHHH
Confidence            999999999999999998874

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=2.5e-17  Score=112.43  Aligned_cols=104  Identities=29%  Similarity=0.422  Sum_probs=80.4

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCC--CCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPD--SVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~   92 (133)
                      ...|+..|++||++..  ..++.++|+||+|+++|++++|..||.+..  ..+..+.... ...+.  ..+..+.+++.+
T Consensus       191 ~~~g~~~y~aPE~~~~--~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~  267 (316)
T cd05574         191 SFVGTEEYIAPEVISG--DGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKE-VTFPGSPPVSSSARDLIRK  267 (316)
T ss_pred             CCcCccCCcCHHHHcC--CCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCC-ccCCCccccCHHHHHHHHH
Confidence            4578999999999987  447899999999999999999999997654  2233222221 12222  368899999999


Q ss_pred             HcccCCCCCCC----HHHHhhCCCCCCCCCCCCCC
Q 032788           93 CLQVNPNDRPT----AAQLMEHPFVKRPLPTSWGL  123 (133)
Q Consensus        93 ~l~~~p~~R~s----~~~~l~~~~~~~~~~~~~~~  123 (133)
                      |+..+|.+|++    +++++.|+||.........+
T Consensus       268 ~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~~~~~~  302 (316)
T cd05574         268 LLVKDPSKRLGSKRGAAEIKQHPFFRGVNWALIRH  302 (316)
T ss_pred             HccCCHhHCCCchhhHHHHHcCchhhcCChhhccc
Confidence            99999999999    99999999998754444443

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.72  E-value=2.4e-17  Score=109.23  Aligned_cols=94  Identities=28%  Similarity=0.558  Sum_probs=79.0

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ..|++.|++||....  ..++.++|+||+|++++++++|..||...+  .....+..+..+..+...+..+.+++.+||.
T Consensus       161 ~~~~~~~~~pe~~~~--~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  238 (256)
T cd08218         161 CIGTPYYLSPEICEN--RPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSSHYSYDLRNLVSQLFK  238 (256)
T ss_pred             ccCCccccCHHHhCC--CCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhh
Confidence            467888999999876  447889999999999999999999986543  3344445555555677788999999999999


Q ss_pred             cCCCCCCCHHHHhhCCCC
Q 032788           96 VNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~~~~  113 (133)
                      .+|.+||++.++++|+||
T Consensus       239 ~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         239 RNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             CChhhCcCHHHHhhCcCC
Confidence            999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.72  E-value=3.8e-17  Score=110.39  Aligned_cols=96  Identities=24%  Similarity=0.315  Sum_probs=72.2

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC-------------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL-------------------   75 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~-------------------   75 (133)
                      ...|++.|+|||.+.+. ..++.++|+||+|+++|++++|..||.+..  ..+..+.....                   
T Consensus       162 ~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (288)
T cd07871         162 NEVVTLWYRPPDVLLGS-TEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSY  240 (288)
T ss_pred             CceecccccChHHhcCC-cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhcc
Confidence            34788999999998753 347899999999999999999999997643  22211111000                   


Q ss_pred             --CC--------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           76 --PP--------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        76 --~~--------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                        +.        .....+.+..+++.+|+..||.+|+|++|+++||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         241 LFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             ccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence              00        012356788999999999999999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.72  E-value=5.1e-17  Score=107.82  Aligned_cols=95  Identities=26%  Similarity=0.489  Sum_probs=79.3

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ...|+..|++||++..  ..++.++|+|++|+++|++++|..||....  .....+..+.....+...+..+.+++..|+
T Consensus       169 ~~~~~~~~~~pE~~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l  246 (265)
T cd08217         169 TYVGTPYYMSPEQLNH--MSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRIPYRYSSELNEVIKSML  246 (265)
T ss_pred             ccccCCCccChhhhcC--CCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHc
Confidence            4578899999999987  447889999999999999999999987653  233444445555566678899999999999


Q ss_pred             ccCCCCCCCHHHHhhCCCC
Q 032788           95 QVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~~~~  113 (133)
                      ..+|.+||+++++++|||+
T Consensus       247 ~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         247 NVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             cCCcccCCCHHHHhhCCCC
Confidence            9999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.72  E-value=4e-17  Score=108.05  Aligned_cols=94  Identities=29%  Similarity=0.566  Sum_probs=77.4

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ..|+..|++||.+..  ..++.++|+||+|+++|++++|..||...+  ..............+...+..+.+++..||.
T Consensus       161 ~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  238 (256)
T cd08220         161 VVGTPCYISPELCEG--KPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDRYSPDLRQLILSMLN  238 (256)
T ss_pred             cccCCcccCchhccC--CCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHcc
Confidence            467889999999987  347889999999999999999999987654  2233333444445566688899999999999


Q ss_pred             cCCCCCCCHHHHhhCCCC
Q 032788           96 VNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~~~~  113 (133)
                      .+|.+||+++++++|||+
T Consensus       239 ~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         239 LDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             CChhhCCCHHHHhhCCCC
Confidence            999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.72  E-value=1.6e-17  Score=113.31  Aligned_cols=96  Identities=21%  Similarity=0.264  Sum_probs=69.3

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----------HHHHHHHhCCC----------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----------WALFKIARGEL----------   75 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----------~~~~~~~~~~~----------   75 (133)
                      ...||..|+|||++.+. ..++.++|+||+|+++|++++|..||....           .....+.....          
T Consensus       174 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (317)
T cd07867         174 PVVVTFWYRAPELLLGA-RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDI  252 (317)
T ss_pred             cceecccccCcHHhcCC-CccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhh
Confidence            45788999999998753 347899999999999999999999986421           01111100000          


Q ss_pred             ---C------------------------CCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           76 ---P------------------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        76 ---~------------------------~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                         +                        .........+.+++.+|+..||.+|+|++|+++||||
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         253 RKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             hhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence               0                        0011224567889999999999999999999999997

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.72  E-value=1.5e-17  Score=114.40  Aligned_cols=97  Identities=26%  Similarity=0.446  Sum_probs=78.4

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCh----------HHHHHHHHhCCCCCCCCCCCHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV----------EWALFKIARGELPPIPDSVSRDA   86 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~----------~~~~~~~~~~~~~~~~~~~~~~~   86 (133)
                      ..+||..|+|||++..  ..++.++|+||+|+++|++++|..||...          ...............|...+..+
T Consensus       155 ~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~  232 (329)
T cd05618         155 TFCGTPNYIAPEILRG--EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKA  232 (329)
T ss_pred             cccCCccccCHHHHcC--CCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHHH
Confidence            4689999999999987  45889999999999999999999998421          11222223334445677888999


Q ss_pred             HHHHHHHcccCCCCCCC------HHHHhhCCCCCC
Q 032788           87 RDFILKCLQVNPNDRPT------AAQLMEHPFVKR  115 (133)
Q Consensus        87 ~~~~~~~l~~~p~~R~s------~~~~l~~~~~~~  115 (133)
                      .+++.+||..||.+|++      ++++++||||..
T Consensus       233 ~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~  267 (329)
T cd05618         233 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN  267 (329)
T ss_pred             HHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence            99999999999999998      579999999975

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.72  E-value=2.1e-17  Score=111.51  Aligned_cols=97  Identities=22%  Similarity=0.391  Sum_probs=78.2

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH-----HHHHHHhCCCCCCCCCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-----ALFKIARGELPPIPDSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (133)
                      ..+|+..|++||.+..  ..++.++|+||+|+++|++++|..||.+...     .............+...+..+.+++.
T Consensus       160 ~~~~~~~y~aPE~~~~--~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  237 (285)
T cd05605         160 GRVGTVGYMAPEVVKN--ERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICR  237 (285)
T ss_pred             cccCCCCccCcHHhcC--CCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHH
Confidence            3578999999999987  4588999999999999999999999976431     12222222233445568889999999


Q ss_pred             HHcccCCCCCC-----CHHHHhhCCCCCC
Q 032788           92 KCLQVNPNDRP-----TAAQLMEHPFVKR  115 (133)
Q Consensus        92 ~~l~~~p~~R~-----s~~~~l~~~~~~~  115 (133)
                      +||..||.+|+     ++++++.|+||.+
T Consensus       238 ~~l~~~P~~R~~~~~~~~~~l~~~~~~~~  266 (285)
T cd05605         238 QLLTKDPGFRLGCRGEGAEEVKAHPFFRT  266 (285)
T ss_pred             HHccCCHHHhcCCCCCCHHHHhcCcCccC
Confidence            99999999999     8999999999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.72  E-value=3.1e-17  Score=109.45  Aligned_cols=95  Identities=38%  Similarity=0.720  Sum_probs=74.1

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHH-HHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALF-KIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..|+..|+|||.+..  ..++.++|+||+|+++|++++|..||....  .... .......+..+......+..++ .||
T Consensus       169 ~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~  245 (266)
T cd06651         169 VTGTPYWMSPEVISG--EGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDFL-GCI  245 (266)
T ss_pred             CCccccccCHHHhCC--CCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCchhcCHHHHHHH-HHh
Confidence            468889999999987  447899999999999999999999997654  2222 2222223444556778888888 578


Q ss_pred             ccCCCCCCCHHHHhhCCCCCC
Q 032788           95 QVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      ..+|.+||++++++.||||+.
T Consensus       246 ~~~p~~Rp~~~eil~hp~~~~  266 (266)
T cd06651         246 FVEARHRPSAEELLRHPFAQL  266 (266)
T ss_pred             cCChhhCcCHHHHhcCccccC
Confidence            889999999999999999863

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.72  E-value=4.5e-17  Score=108.71  Aligned_cols=96  Identities=35%  Similarity=0.714  Sum_probs=75.5

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH---HH-HHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW---AL-FKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ..|+..|++||.+......++.++|+||+|+++|++++|..||.....   .. ........+..+.....++.+++.+|
T Consensus       169 ~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  248 (268)
T cd06624         169 FTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRC  248 (268)
T ss_pred             CCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHH
Confidence            357889999999865323478899999999999999999999875431   11 11112233445667888999999999


Q ss_pred             cccCCCCCCCHHHHhhCCCC
Q 032788           94 LQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~~~~  113 (133)
                      |..+|.+||++++++.|||+
T Consensus       249 l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         249 FEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             cCCCchhCCCHHHHHhCCCC
Confidence            99999999999999999996

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.72  E-value=9.7e-19  Score=116.66  Aligned_cols=103  Identities=34%  Similarity=0.545  Sum_probs=82.7

Q ss_pred             hhhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCC--CCCCCCCHHHHHH
Q 032788           14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELP--PIPDSVSRDARDF   89 (133)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~   89 (133)
                      ..++++||+.|||||++..  -+|+.++||||+|+...||..|++||....  ..+..+-....+  ..|...+.++.+|
T Consensus       185 KRNTVIGTPFWMAPEVI~E--IGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DF  262 (502)
T KOG0574|consen  185 KRNTVIGTPFWMAPEVIEE--IGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDF  262 (502)
T ss_pred             hhCccccCcccccHHHHHH--hccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHH
Confidence            3577899999999999998  459999999999999999999999998765  233333222221  1234567889999


Q ss_pred             HHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           90 ILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        90 ~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      ++.|+..+|.+|.++-++++|+|.+...+
T Consensus       263 i~~CLiK~PE~R~TA~~L~~H~FiknA~g  291 (502)
T KOG0574|consen  263 IRSCLIKKPEERKTALRLCEHTFIKNAPG  291 (502)
T ss_pred             HHHHhcCCHHHHHHHHHHhhhhhhcCCCc
Confidence            99999999999999999999999986543

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.72  E-value=8.6e-17  Score=110.67  Aligned_cols=112  Identities=25%  Similarity=0.334  Sum_probs=83.8

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh---CCCCC---------------
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR---GELPP---------------   77 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~---~~~~~---------------   77 (133)
                      ..++..|++||.+.+. ..++.++|+||+|+++|++++|..||.+.+  ..+..+..   .....               
T Consensus       193 ~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  271 (335)
T PTZ00024        193 KVVTLWYRAPELLMGA-EKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFT  271 (335)
T ss_pred             cccccCCCCChhcccC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccC
Confidence            3567889999998753 346889999999999999999999987643  11211111   00000               


Q ss_pred             ---------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCCCCCCCCcccccc
Q 032788           78 ---------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHHFI  130 (133)
Q Consensus        78 ---------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~~~~~~~~~~~~~  130 (133)
                               .....+..+.+++.+|+..+|.+|+++++++.|+||+......-+.|.|..++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~~~~~~~~~~~~~  333 (335)
T PTZ00024        272 PRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPLPCDPSQLPFNFL  333 (335)
T ss_pred             cCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCCCCCCcccCChhhh
Confidence                     01234677889999999999999999999999999999888777777777664

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.71  E-value=1.6e-17  Score=115.77  Aligned_cols=99  Identities=28%  Similarity=0.490  Sum_probs=86.9

Q ss_pred             hhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ..+.+||+.|++||.+.+  ..|+.|+||||+||++||+.+-+++|.+.+  .-..++......+.+...+.++..++..
T Consensus       163 a~tvvGTp~YmcPEil~d--~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~~ys~el~~lv~~  240 (426)
T KOG0589|consen  163 ASTVVGTPYYMCPEILSD--IPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPSMYSSELRSLVKS  240 (426)
T ss_pred             hheecCCCcccCHHHhCC--CCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCccccHHHHHHHHH
Confidence            345799999999999998  569999999999999999999999998876  3345566666678888999999999999


Q ss_pred             HcccCCCCCCCHHHHhhCCCCCC
Q 032788           93 CLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      |+..+|..||++.+++.+|.+..
T Consensus       241 ~l~~~P~~RPsa~~LL~~P~l~~  263 (426)
T KOG0589|consen  241 MLRKNPEHRPSALELLRRPHLLR  263 (426)
T ss_pred             HhhcCCccCCCHHHHhhChhhhh
Confidence            99999999999999999987764

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.71  E-value=3.2e-17  Score=110.17  Aligned_cols=97  Identities=32%  Similarity=0.525  Sum_probs=73.6

Q ss_pred             ccccccccccccccccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCC-CCCCCCCHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSK---NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELP-PIPDSVSRDARDFI   90 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~---~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~   90 (133)
                      ...|+..|+|||.+...   ...++.++|+||+|+++|++++|..||....  ............ ......+..+.+++
T Consensus       180 ~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  259 (282)
T cd06636         180 TFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFI  259 (282)
T ss_pred             cccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCCCCcccccCHHHHHHH
Confidence            35788899999988621   1347789999999999999999999986543  222222222111 12234678999999


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                      .+||..+|.+||++.++++||||
T Consensus       260 ~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         260 EGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             HHHhCCChhhCcCHHHHhcCCCC
Confidence            99999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.71  E-value=3.7e-17  Score=110.10  Aligned_cols=95  Identities=27%  Similarity=0.402  Sum_probs=71.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC------------------C
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL------------------P   76 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~------------------~   76 (133)
                      ...||..|+|||++..  ..++.++|+||+|+++|++++|.++|.+..  ..+..+.....                  .
T Consensus       166 ~~~~~~~y~aPE~~~~--~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (288)
T cd07863         166 PVVVTLWYRAPEVLLQ--STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFS  243 (288)
T ss_pred             CccccccccCchHhhC--CCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccC
Confidence            3478889999999976  458999999999999999999999886543  22222211000                  0


Q ss_pred             --------CCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           77 --------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        77 --------~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                              ......+..+.+++.+|+..||.+|+++.+++.||||
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         244 PRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             CCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                    0012356678899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.71  E-value=6.2e-17  Score=107.72  Aligned_cols=97  Identities=31%  Similarity=0.575  Sum_probs=77.6

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-------HHHHHHHhCCCCCCCCC-CCHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-------WALFKIARGELPPIPDS-VSRDARDF   89 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~~~~   89 (133)
                      ..|+..|++||.+..  ..++.++|+||+|+++|++++|..||....       ...........+..+.. .+..+.++
T Consensus       159 ~~~~~~y~~PE~~~~--~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  236 (265)
T cd06605         159 FVGTSSYMAPERIQG--NDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDF  236 (265)
T ss_pred             ccCChhccCHHHHcC--CCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHH
Confidence            678889999999977  458899999999999999999999986541       22233333333333333 77889999


Q ss_pred             HHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           90 ILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        90 ~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      +..||..+|.+||++.+++.||||...
T Consensus       237 i~~~l~~~p~~Rpt~~~ll~~~~~~~~  263 (265)
T cd06605         237 VNLCLIKDPRERPSYKELLEHPFIKKY  263 (265)
T ss_pred             HHHHcCCCchhCcCHHHHhhCchhhcc
Confidence            999999999999999999999999764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>PHA02988 hypothetical protein; Provisional

Probab=99.71  E-value=5.4e-17  Score=109.55  Aligned_cols=92  Identities=16%  Similarity=0.267  Sum_probs=73.4

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHH-HhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKI-ARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..|+..|+|||.+.+....++.++|+||+|+++|++++|..||.+..  .....+ ........+...+..+.+++.+||
T Consensus       180 ~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl  259 (283)
T PHA02988        180 NVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACT  259 (283)
T ss_pred             ccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHh
Confidence            47888999999987522348999999999999999999999998654  222222 233344555568899999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032788           95 QVNPNDRPTAAQLME  109 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~  109 (133)
                      ..||.+||++++++.
T Consensus       260 ~~dp~~Rps~~ell~  274 (283)
T PHA02988        260 SHDSIKRPNIKEILY  274 (283)
T ss_pred             cCCcccCcCHHHHHH
Confidence            999999999999875

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.71  E-value=7.7e-17  Score=107.38  Aligned_cols=95  Identities=40%  Similarity=0.714  Sum_probs=76.7

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH--HHHHHHh--CCCCCCCCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIAR--GELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ...|+..|++||.+..  ..++.++|+|++|+++|++++|..||...+.  .......  ...+..+...+..+.+++++
T Consensus       167 ~~~~~~~~~~pe~~~~--~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  244 (265)
T cd06631         167 SMHGTPYWMAPEVINE--SGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTS  244 (265)
T ss_pred             ccCCCccccChhhhcC--CCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHH
Confidence            3568889999999987  4478899999999999999999999976441  1111111  23344566788999999999


Q ss_pred             HcccCCCCCCCHHHHhhCCCC
Q 032788           93 CLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~~  113 (133)
                      ||..+|.+||++++++.||||
T Consensus       245 ~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         245 CLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             HhcCCcccCCCHHHHhcCCCC
Confidence            999999999999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.71  E-value=7.3e-17  Score=109.29  Aligned_cols=103  Identities=33%  Similarity=0.487  Sum_probs=79.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCC--CCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~   92 (133)
                      ...|+..|+|||.+..  ..++.++|+||+|+++|++++|..||....  .....+........  ....+..+.+++..
T Consensus       177 ~~~~~~~y~aPE~~~~--~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  254 (292)
T cd06658         177 SLVGTPYWMAPEVISR--LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDL  254 (292)
T ss_pred             eeecCccccCHHHHcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHH
Confidence            3468889999999976  447889999999999999999999987643  22222222222222  23467789999999


Q ss_pred             HcccCCCCCCCHHHHhhCCCCCCCCCCCC
Q 032788           93 CLQVNPNDRPTAAQLMEHPFVKRPLPTSW  121 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~~~~~~~~~~  121 (133)
                      |+..+|.+||+++++++|+||....+++.
T Consensus       255 ~l~~~P~~Rpt~~~il~~~~~~~~~~~~~  283 (292)
T cd06658         255 MLVREPSQRATAQELLQHPFLKLAGPPSC  283 (292)
T ss_pred             HccCChhHCcCHHHHhhChhhhccCCccc
Confidence            99999999999999999999987766554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.71  E-value=1.8e-17  Score=113.68  Aligned_cols=96  Identities=21%  Similarity=0.303  Sum_probs=78.0

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..+||+.|+|||.+..  ..++.++|+||+|+++|++++|..||...+  .....+.. .....+...+..+.+++.+|+
T Consensus       155 ~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~li~~~l  231 (323)
T cd05575         155 TFCGTPEYLAPEVLRK--QPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILN-KPLRLKPNISVSARHLLEGLL  231 (323)
T ss_pred             cccCChhhcChhhhcC--CCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHc-CCCCCCCCCCHHHHHHHHHHh
Confidence            4579999999999987  458899999999999999999999997654  22233332 233445567899999999999


Q ss_pred             ccCCCCCCCH----HHHhhCCCCCC
Q 032788           95 QVNPNDRPTA----AQLMEHPFVKR  115 (133)
Q Consensus        95 ~~~p~~R~s~----~~~l~~~~~~~  115 (133)
                      ..||.+|+++    ++++.|+||..
T Consensus       232 ~~~p~~R~~~~~~~~~il~~~~~~~  256 (323)
T cd05575         232 QKDRTKRLGAKDDFLEIKNHVFFSS  256 (323)
T ss_pred             hcCHHhCCCCCCCHHHHHcCCCcCC
Confidence            9999999986    69999999975

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.71  E-value=4.2e-17  Score=112.10  Aligned_cols=98  Identities=21%  Similarity=0.376  Sum_probs=79.2

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCh--------HHHHHHHHhCCCCCCCCCCCHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV--------EWALFKIARGELPPIPDSVSRDARD   88 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~   88 (133)
                      ..+||+.|+|||.+..  ..++.++|+||+|+++|++++|..||...        ...............+...+..+.+
T Consensus       155 ~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  232 (327)
T cd05617         155 TFCGTPNYIAPEILRG--EEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASH  232 (327)
T ss_pred             cccCCcccCCHHHHCC--CCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            4689999999999987  45899999999999999999999999531        1223333333444567778899999


Q ss_pred             HHHHHcccCCCCCCC------HHHHhhCCCCCCC
Q 032788           89 FILKCLQVNPNDRPT------AAQLMEHPFVKRP  116 (133)
Q Consensus        89 ~~~~~l~~~p~~R~s------~~~~l~~~~~~~~  116 (133)
                      ++.+|+..||.+|++      +++++.|+||...
T Consensus       233 li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~  266 (327)
T cd05617         233 VLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI  266 (327)
T ss_pred             HHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence            999999999999987      5799999999763

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.70  E-value=2e-17  Score=118.17  Aligned_cols=99  Identities=24%  Similarity=0.419  Sum_probs=83.6

Q ss_pred             hhhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhCCCCCC-CCCCCHHHHHH
Q 032788           14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELPPI-PDSVSRDARDF   89 (133)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~   89 (133)
                      +.++.+|||.|||||++..   .|+..+||||+|+++.||.++..||..+.   .+..++.+|.-+.. .....+++++|
T Consensus       200 ~aksvIGTPEFMAPEmYEE---~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~f  276 (632)
T KOG0584|consen  200 HAKSVIGTPEFMAPEMYEE---NYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREF  276 (632)
T ss_pred             ccceeccCccccChHHHhh---hcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHH
Confidence            4456799999999999985   39999999999999999999999998775   45566777755433 23346799999


Q ss_pred             HHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           90 ILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        90 ~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      |.+|+.. ...|+++.|+|+|+||...
T Consensus       277 IekCl~~-~~~R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  277 IEKCLAT-KSERLSAKELLKDPFFDED  302 (632)
T ss_pred             HHHHhcC-chhccCHHHHhhChhhccc
Confidence            9999998 8999999999999999875

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.70  E-value=1.1e-16  Score=106.01  Aligned_cols=94  Identities=32%  Similarity=0.627  Sum_probs=75.7

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ..|++.|+|||....  ..++.++|+||+|++++++++|..||....  ..................+..+.+++.+|+.
T Consensus       162 ~~~~~~~~ape~~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  239 (257)
T cd08225         162 CVGTPYYLSPEICQN--RPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPISPNFSRDLRSLISQLFK  239 (257)
T ss_pred             cCCCccccCHHHHcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHhc
Confidence            368889999999876  347899999999999999999999987654  2222233333333445677899999999999


Q ss_pred             cCCCCCCCHHHHhhCCCC
Q 032788           96 VNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~~~~  113 (133)
                      .+|.+||+++++++|+||
T Consensus       240 ~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         240 VSPRDRPSITSILKRPFL  257 (257)
T ss_pred             cChhhCcCHHHHhhCCCC
Confidence            999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.70  E-value=7.9e-17  Score=111.00  Aligned_cols=100  Identities=29%  Similarity=0.473  Sum_probs=75.1

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-HHHHH--------------------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFK--------------------------   69 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-~~~~~--------------------------   69 (133)
                      ...|+..|+|||.+.+  ..++.++|+||+|+++|++++|..||.... .....                          
T Consensus       161 ~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (333)
T cd06650         161 SFVGTRSYMSPERLQG--THYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPL  238 (333)
T ss_pred             cCCCCccccCHHHhcC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchh
Confidence            4578999999999987  458899999999999999999999986432 11110                          


Q ss_pred             -------------------HHhCCCCCCC-CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           70 -------------------IARGELPPIP-DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        70 -------------------~~~~~~~~~~-~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                                         +.....+..+ ...+.++.+++.+||..||.+||++++++.|+|++....
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~~  307 (333)
T cd06650         239 SSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSEA  307 (333)
T ss_pred             hhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCcc
Confidence                               0011111111 135678899999999999999999999999999976543

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.70  E-value=9.9e-17  Score=108.21  Aligned_cols=99  Identities=33%  Similarity=0.535  Sum_probs=77.9

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCC--CCCCCHHHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDARDFILKC   93 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~   93 (133)
                      ..|+..|++||....  ..++.++|+||+|+++|++++|..||...+  .....+.....+..  +...+..+.+++.+|
T Consensus       175 ~~~~~~y~aPE~~~~--~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  252 (285)
T cd06648         175 LVGTPYWMAPEVISR--LPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRM  252 (285)
T ss_pred             ccCCccccCHHHhcC--CCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHH
Confidence            468899999999876  448899999999999999999999986644  22233332222111  233678999999999


Q ss_pred             cccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           94 LQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      |..+|.+||+++++++|+|+.+...
T Consensus       253 l~~~p~~Rpt~~~il~~~~~~~~~~  277 (285)
T cd06648         253 LVRDPAQRATAAELLNHPFLAKAGP  277 (285)
T ss_pred             cccChhhCcCHHHHccCcccccCCC
Confidence            9999999999999999999987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.70  E-value=2.8e-17  Score=110.92  Aligned_cols=97  Identities=24%  Similarity=0.421  Sum_probs=77.4

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHHHHHHhCCCCCCCCCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WALFKIARGELPPIPDSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (133)
                      ...|+..|+|||.+..  ..++.++|+||+|+++|++++|..||....     ..............+...+..+.+++.
T Consensus       160 ~~~g~~~y~aPE~~~~--~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  237 (285)
T cd05630         160 GRVGTVGYMAPEVVKN--ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCK  237 (285)
T ss_pred             CCCCCccccChHHHcC--CCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHH
Confidence            3478999999999987  448899999999999999999999997542     112222122222345567889999999


Q ss_pred             HHcccCCCCCCC-----HHHHhhCCCCCC
Q 032788           92 KCLQVNPNDRPT-----AAQLMEHPFVKR  115 (133)
Q Consensus        92 ~~l~~~p~~R~s-----~~~~l~~~~~~~  115 (133)
                      .||..||.+|++     +++++.|+||..
T Consensus       238 ~~l~~~p~~R~s~~~~~~~~~~~h~~~~~  266 (285)
T cd05630         238 MLLCKDPKERLGCQGGGAREVKEHPLFKQ  266 (285)
T ss_pred             HHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence            999999999999     899999999976

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.70  E-value=6.2e-17  Score=107.67  Aligned_cols=95  Identities=33%  Similarity=0.558  Sum_probs=74.1

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCC-----CCCCHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIP-----DSVSRDARDFI   90 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~   90 (133)
                      .+|+..|++||.+... ..++.++|+|++|+++|++++|..||....  ...............     ...+..+.+++
T Consensus       166 ~~~~~~y~~Pe~~~~~-~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  244 (267)
T cd06610         166 FVGTPCWMAPEVMEQV-HGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMI  244 (267)
T ss_pred             ccCChhhcChHHHccc-cCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHH
Confidence            4688899999998763 257889999999999999999999997654  222222222222222     24568899999


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                      .+||..+|.+||+++++++||||
T Consensus       245 ~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         245 SLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             HHHcCCChhhCcCHHHHhhCCCC
Confidence            99999999999999999999997

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.70  E-value=2.9e-17  Score=117.48  Aligned_cols=95  Identities=25%  Similarity=0.369  Sum_probs=78.1

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHccc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV   96 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   96 (133)
                      +-|-|..|.|||+...  ..|+..+|+||+|+++|+|++|..||............-..++....++...+++++.||..
T Consensus       472 tp~~t~~y~APEvl~~--~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s~~vS~~AKdLl~~LL~~  549 (612)
T KOG0603|consen  472 TPALTLQYVAPEVLAI--QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFSECVSDEAKDLLQQLLQV  549 (612)
T ss_pred             ccchhhcccChhhhcc--CCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccccccCHHHHHHHHHhccC
Confidence            4588899999999986  56999999999999999999999999765422211111122233478999999999999999


Q ss_pred             CCCCCCCHHHHhhCCCC
Q 032788           97 NPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        97 ~p~~R~s~~~~l~~~~~  113 (133)
                      ||.+|+++.++..|+|+
T Consensus       550 dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  550 DPALRLGADEIGAHPWF  566 (612)
T ss_pred             ChhhCcChhhhccCcch
Confidence            99999999999999999

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.70  E-value=4.4e-17  Score=114.82  Aligned_cols=100  Identities=21%  Similarity=0.332  Sum_probs=83.5

Q ss_pred             hhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH--HHHHHHhCCC-CCCCCCCCHHHHHHHH
Q 032788           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGEL-PPIPDSVSRDARDFIL   91 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~   91 (133)
                      .-++|||+.|.|||++..  .+.+..+|.|++|+++||+++|.+||.+.+.  ....+.++.. ...|..+++...+++.
T Consensus       576 TwTFcGTpEYVAPEIILn--KGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik  653 (732)
T KOG0614|consen  576 TWTFCGTPEYVAPEIILN--KGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDLIK  653 (732)
T ss_pred             eeeecCCcccccchhhhc--cCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHHHH
Confidence            456799999999999998  4589999999999999999999999999872  2333434432 3567888999999999


Q ss_pred             HHcccCCCCCCC-----HHHHhhCCCCCCC
Q 032788           92 KCLQVNPNDRPT-----AAQLMEHPFVKRP  116 (133)
Q Consensus        92 ~~l~~~p~~R~s-----~~~~l~~~~~~~~  116 (133)
                      ++...+|.+|.-     +.++..|.||.+-
T Consensus       654 ~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gf  683 (732)
T KOG0614|consen  654 KLCRDNPTERLGYQKGGINDIKKHRWFEGF  683 (732)
T ss_pred             HHHhcCcHhhhccccCChHHHHhhhhhhcC
Confidence            999999999964     8899999999863

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.70  E-value=6.9e-17  Score=110.93  Aligned_cols=97  Identities=32%  Similarity=0.557  Sum_probs=71.4

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH--HHHHHHhCCCC--------------------
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELP--------------------   76 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~--~~~~~~~~~~~--------------------   76 (133)
                      .++..|+|||++......++.++|+||+|+++|++++|..||.....  .......+..+                    
T Consensus       169 ~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (327)
T cd08227         169 VKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRS  248 (327)
T ss_pred             cceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCccc
Confidence            56777999999975323488999999999999999999999975331  11111110000                    


Q ss_pred             -------------------------CCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           77 -------------------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        77 -------------------------~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                                               ......+..+.+++.+||..||.+||+++++++||||+.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~  312 (327)
T cd08227         249 GANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ  312 (327)
T ss_pred             CCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence                                     001123567889999999999999999999999999975

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.70  E-value=8e-17  Score=110.54  Aligned_cols=96  Identities=22%  Similarity=0.368  Sum_probs=78.7

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..+||+.|+|||++..  ..++.++|+||+|+++|++++|..||.+..  .....+.. .....+...+..+.+++.+|+
T Consensus       160 ~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~-~~~~~p~~~~~~~~~li~~~l  236 (323)
T cd05615         160 TFCGTPDYIAPEIIAY--QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME-HNVSYPKSLSKEAVSICKGLM  236 (323)
T ss_pred             CccCCccccCHHHHcC--CCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh-CCCCCCccCCHHHHHHHHHHc
Confidence            4579999999999987  458899999999999999999999997754  22333332 333556678899999999999


Q ss_pred             ccCCCCCCC-----HHHHhhCCCCCC
Q 032788           95 QVNPNDRPT-----AAQLMEHPFVKR  115 (133)
Q Consensus        95 ~~~p~~R~s-----~~~~l~~~~~~~  115 (133)
                      ..+|.+|++     .+++++|+||..
T Consensus       237 ~~~p~~R~~~~~~~~~~i~~h~~f~~  262 (323)
T cd05615         237 TKHPSKRLGCGPEGERDIREHAFFRR  262 (323)
T ss_pred             ccCHhhCCCCCCCCHHHHhcCcccCC
Confidence            999999997     578999999986

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.70  E-value=9e-17  Score=112.95  Aligned_cols=103  Identities=24%  Similarity=0.368  Sum_probs=76.2

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHHHHHHhCC-----------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WALFKIARGE-----------------   74 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~~~~~~~~-----------------   74 (133)
                      ...||+.|+|||++..  ..++.++|+||+||++|++++|..||.+..     ..+..+....                 
T Consensus       246 ~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~  323 (392)
T PHA03207        246 GWSGTLETNSPELLAL--DPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCK  323 (392)
T ss_pred             ccccccCccCHhHhcC--CCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHH
Confidence            4579999999999987  458999999999999999999999986532     1111111100                 


Q ss_pred             ---------CCC--CC-----CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCCCCC
Q 032788           75 ---------LPP--IP-----DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSW  121 (133)
Q Consensus        75 ---------~~~--~~-----~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~~~~  121 (133)
                               .+.  .+     ......+.+++.+|+..||++|+++.+++.||||.+..+..+
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~~~~  386 (392)
T PHA03207        324 HFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPINLL  386 (392)
T ss_pred             HHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccchhhh
Confidence                     000  00     123557788999999999999999999999999987555443

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.70  E-value=1.2e-16  Score=108.40  Aligned_cols=98  Identities=33%  Similarity=0.557  Sum_probs=77.5

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC--CCCCCCCCHHHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL--PPIPDSVSRDARDFILKC   93 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~   93 (133)
                      ..|+..|++||.+..  ..++.++|+||+|+++|++++|..||....  .....+.....  ...+..++..+.+++.+|
T Consensus       175 ~~~~~~y~aPE~~~~--~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  252 (296)
T cd06655         175 MVGTPYWMAPEVVTR--KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRC  252 (296)
T ss_pred             cCCCccccCcchhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHH
Confidence            478889999999886  447899999999999999999999997654  22222222211  123456788899999999


Q ss_pred             cccCCCCCCCHHHHhhCCCCCCCC
Q 032788           94 LQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      |..+|.+|+++++++.|+|+....
T Consensus       253 l~~dp~~Rpt~~~il~~~~~~~~~  276 (296)
T cd06655         253 LEMDVEKRGSAKELLQHPFLKLAK  276 (296)
T ss_pred             hhcChhhCCCHHHHhhChHhhhcc
Confidence            999999999999999999997543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=3.2e-17  Score=112.81  Aligned_cols=99  Identities=23%  Similarity=0.375  Sum_probs=77.3

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCC-CCCCC------CCCCHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGE-LPPIP------DSVSRDA   86 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~-~~~~~------~~~~~~~   86 (133)
                      ...+||+.|+|||.+..  ..++.++|+||+|+++|++++|..||.+..  .....+.... ....+      ..++..+
T Consensus       156 ~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~  233 (333)
T cd05600         156 NSVVGSPDYMAPEVLRG--KGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEA  233 (333)
T ss_pred             CCcccCccccChhHhcC--CCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHH
Confidence            34689999999999987  458999999999999999999999997654  2222222111 11111      2457899


Q ss_pred             HHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           87 RDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        87 ~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      .+++.+|+..+|.+|++++++++|+||...
T Consensus       234 ~~li~~~l~~~~~rr~s~~~ll~h~~~~~~  263 (333)
T cd05600         234 WDLITKLINDPSRRFGSLEDIKNHPFFKEV  263 (333)
T ss_pred             HHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence            999999999999999999999999999864

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.69  E-value=4.2e-17  Score=119.72  Aligned_cols=86  Identities=22%  Similarity=0.524  Sum_probs=77.9

Q ss_pred             ccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccC
Q 032788           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQVN   97 (133)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   97 (133)
                      ...||+||.+.+  ++|+.++||||+||++||+++ |+.|+.+..  +.+..++.+...+.|..++.++.++|..||+.+
T Consensus       668 PIRWMppEsIly--~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~  745 (774)
T KOG1026|consen  668 PIRWMPPESILY--GKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQLLSCPENCPTEVYSLMLECWNEN  745 (774)
T ss_pred             eeecCCHHHhhc--CcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcC
Confidence            357999999999  569999999999999999977 889987653  788888888888999999999999999999999


Q ss_pred             CCCCCCHHHHh
Q 032788           98 PNDRPTAAQLM  108 (133)
Q Consensus        98 p~~R~s~~~~l  108 (133)
                      |.+||++.||-
T Consensus       746 P~~RPsF~eI~  756 (774)
T KOG1026|consen  746 PKRRPSFKEIH  756 (774)
T ss_pred             cccCCCHHHHH
Confidence            99999999873

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.69  E-value=7.7e-17  Score=108.61  Aligned_cols=100  Identities=27%  Similarity=0.491  Sum_probs=76.4

Q ss_pred             cccccccccccccccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCChHH---HHHHHHhCCCCCCC----CCCCHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKN-GGYGLPADIWSVGCTVLEMLTRCRPYFGVEW---ALFKIARGELPPIP----DSVSRDARDF   89 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~-~~~~~~~diws~g~~~~~l~~~~~p~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~   89 (133)
                      ..|+..|++||.+.... ..++.++|+||+|+++|++++|+.||.....   ..........+..+    ...+..+.++
T Consensus       167 ~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  246 (288)
T cd06616         167 DAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNF  246 (288)
T ss_pred             ccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHH
Confidence            46888999999987631 2478899999999999999999999976542   22222222222221    2367889999


Q ss_pred             HHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           90 ILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        90 ~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      +.+||..+|.+||+++++++|+||+...
T Consensus       247 i~~~l~~~p~~Rpt~~~i~~~~~~~~~~  274 (288)
T cd06616         247 INLCLIKDESKRPKYKELLEHPFIKDYE  274 (288)
T ss_pred             HHHHccCChhhCcCHHHHhcChhhhchh
Confidence            9999999999999999999999997643

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=9.3e-18  Score=115.34  Aligned_cols=99  Identities=28%  Similarity=0.456  Sum_probs=77.6

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...+||..|+|||.+... ..++.++|+||+|+++|+|++|..||.+..  .....+..+.........+..+.+++.+|
T Consensus       154 ~~~~gt~~y~aPE~~~~~-~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~  232 (330)
T cd05586         154 NTFCGTTEYLAPEVLLDE-KGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGL  232 (330)
T ss_pred             cCccCCccccCHHHHcCC-CCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHH
Confidence            346899999999998753 347889999999999999999999997654  22333333322222234688999999999


Q ss_pred             cccCCCCCC----CHHHHhhCCCCCC
Q 032788           94 LQVNPNDRP----TAAQLMEHPFVKR  115 (133)
Q Consensus        94 l~~~p~~R~----s~~~~l~~~~~~~  115 (133)
                      |..||.+|+    +++++++|+||..
T Consensus       233 L~~~P~~R~~~~~~~~~ll~h~~~~~  258 (330)
T cd05586         233 LNRNPQHRLGAHRDAVELKEHPFFAD  258 (330)
T ss_pred             cCCCHHHCCCCCCCHHHHhcCccccC
Confidence            999999998    7899999999975

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.69  E-value=1.1e-16  Score=111.64  Aligned_cols=97  Identities=24%  Similarity=0.416  Sum_probs=73.6

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh-----------------------
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR-----------------------   72 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~-----------------------   72 (133)
                      ..++..|+|||.+.+. ..++.++|+||+|+++|++++|+.||.+.+  ..+..+..                       
T Consensus       164 ~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~  242 (372)
T cd07853         164 EVVTQYYRAPEILMGS-RHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILR  242 (372)
T ss_pred             CCcCCCcCCHHHHcCC-CCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHh
Confidence            4678899999998763 347889999999999999999999997543  11111110                       


Q ss_pred             -CCCC-------CCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           73 -GELP-------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        73 -~~~~-------~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                       ...+       ......+..+.+++.+|+..||.+|++++++++||||..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  293 (372)
T cd07853         243 GPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDE  293 (372)
T ss_pred             CCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCC
Confidence             0000       112234678899999999999999999999999999976

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.69  E-value=1.4e-16  Score=112.05  Aligned_cols=98  Identities=23%  Similarity=0.350  Sum_probs=71.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---------HHHHHHHh--C------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---------WALFKIAR--G------------   73 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---------~~~~~~~~--~------------   73 (133)
                      ..+||+.|+|||++..  ..++.++|+||+|+++|++++|..|+....         ..+..+..  +            
T Consensus       242 ~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~  319 (391)
T PHA03212        242 GWAGTIATNAPELLAR--DPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQA  319 (391)
T ss_pred             cccCccCCCChhhhcC--CCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhH
Confidence            4589999999999987  458999999999999999999987764311         11111110  0            


Q ss_pred             ------------CC---CCCC-----CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           74 ------------EL---PPIP-----DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        74 ------------~~---~~~~-----~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                                  ..   ...+     ...+.++.+++.+||..||.+||+++|+++|+||...
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~  382 (391)
T PHA03212        320 NLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDI  382 (391)
T ss_pred             HHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccC
Confidence                        00   0000     1234578899999999999999999999999999763

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.69  E-value=1.2e-16  Score=107.64  Aligned_cols=98  Identities=22%  Similarity=0.360  Sum_probs=78.3

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH----HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ..|+..|++||.+... ..++.++|+||+|+++|++++|..||....    ..............+...+..+.+++.+|
T Consensus       155 ~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  233 (279)
T cd05633         155 SVGTHGYMAPEVLQKG-TAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGL  233 (279)
T ss_pred             cCCCcCccCHHHhcCC-CCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHH
Confidence            4789999999998642 347889999999999999999999996432    22232322333455667889999999999


Q ss_pred             cccCCCCCC-----CHHHHhhCCCCCCC
Q 032788           94 LQVNPNDRP-----TAAQLMEHPFVKRP  116 (133)
Q Consensus        94 l~~~p~~R~-----s~~~~l~~~~~~~~  116 (133)
                      +..||.+|+     +++++++||||+..
T Consensus       234 l~~~p~~R~~~~~~~~~~~~~h~~~~~~  261 (279)
T cd05633         234 LQRDVSKRLGCLGRGAQEVKEHVFFKGI  261 (279)
T ss_pred             hcCCHHHhcCCCCCCHHHHHhCccccCC
Confidence            999999999     69999999999874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.69  E-value=6.9e-17  Score=106.92  Aligned_cols=94  Identities=34%  Similarity=0.590  Sum_probs=72.5

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHH--HHHHHhCCC--CCCCCCCCHHHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA--LFKIARGEL--PPIPDSVSRDARDFILKC   93 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~   93 (133)
                      ..|+..|++||.+.+  ..++.++|+|++|+++|++++|..||......  .........  ...+...+..+.+++.+|
T Consensus       159 ~~~~~~y~~PE~~~~--~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  236 (256)
T cd06612         159 VIGTPFWMAPEVIQE--IGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKC  236 (256)
T ss_pred             ccCCccccCHHHHhc--CCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHH
Confidence            457889999999877  35889999999999999999999998764421  111111111  112334567899999999


Q ss_pred             cccCCCCCCCHHHHhhCCCC
Q 032788           94 LQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~~~~  113 (133)
                      |..+|.+||+++++++|+||
T Consensus       237 l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         237 LVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             HhcChhhCcCHHHHhcCCCC
Confidence            99999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.69  E-value=1.5e-16  Score=107.44  Aligned_cols=98  Identities=32%  Similarity=0.557  Sum_probs=74.6

Q ss_pred             ccccccccccccccccCC---CCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC--CCCCCCHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKN---GGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP--IPDSVSRDARDF   89 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~---~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~   89 (133)
                      ...|+..|++||.+....   ..++.++|+||+|+++|++++|+.||....  .....+.......  .+......+.++
T Consensus       187 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  266 (291)
T cd06639         187 TSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHF  266 (291)
T ss_pred             CccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHH
Confidence            346788999999986421   125789999999999999999999987654  2333333232222  133456789999


Q ss_pred             HHHHcccCCCCCCCHHHHhhCCCCC
Q 032788           90 ILKCLQVNPNDRPTAAQLMEHPFVK  114 (133)
Q Consensus        90 ~~~~l~~~p~~R~s~~~~l~~~~~~  114 (133)
                      +.+||..+|++||+++++++||||+
T Consensus       267 i~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         267 ISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             HHHHhhcChhhCcCHHHHhcCcccC
Confidence            9999999999999999999999984

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.69  E-value=1.3e-16  Score=110.21  Aligned_cols=100  Identities=24%  Similarity=0.322  Sum_probs=73.6

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCC--------------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGE--------------------   74 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~--------------------   74 (133)
                      ..+||..|+|||++... ..++.++|+||+|+++|++++|..||.+.+  ..+..+....                    
T Consensus       174 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (343)
T cd07878         174 GYVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYI  252 (343)
T ss_pred             CccccccccCchHhcCC-ccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHh
Confidence            45789999999998752 347889999999999999999999986533  1111111100                    


Q ss_pred             --CCCC--------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           75 --LPPI--------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        75 --~~~~--------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                        .+..        .......+.+++.+|+..||.+|++++++++||||....
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~  305 (343)
T cd07878         253 QSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYH  305 (343)
T ss_pred             hccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccC
Confidence              0000        112345678999999999999999999999999997643

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.69  E-value=8e-17  Score=119.78  Aligned_cols=98  Identities=20%  Similarity=0.342  Sum_probs=78.0

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC--CCCCCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL--PPIPDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~   92 (133)
                      ..+||+.|+|||++.+  ..++.++||||+||++|++++|..||.+..  ..+..+.....  +.....+...+.+++..
T Consensus       539 ~~vGT~~Y~APE~l~~--~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~  616 (669)
T cd05610         539 RILGTPDYLAPELLLG--KPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEI  616 (669)
T ss_pred             ceeeCccccCHHHcCC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHH
Confidence            4589999999999987  458999999999999999999999997654  22333322211  12223567788999999


Q ss_pred             HcccCCCCCCCHHHHhhCCCCCCC
Q 032788           93 CLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      ||..||.+|+++.++++|+||...
T Consensus       617 lL~~dP~~R~ta~e~l~h~~~~~~  640 (669)
T cd05610         617 LLTMDPTKRAGLKELKQHPLFHGV  640 (669)
T ss_pred             HcccChhHCcCHHHHHhCHhhcCC
Confidence            999999999999999999999764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.69  E-value=2.3e-16  Score=106.24  Aligned_cols=103  Identities=34%  Similarity=0.571  Sum_probs=80.5

Q ss_pred             ccccccccccccccccCC----CCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHHHHHHhCCCCCCCCCCCHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKN----GGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WALFKIARGELPPIPDSVSRDAR   87 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~----~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~   87 (133)
                      ...|+..|++||.+....    ..++.++|+|++|+++|++++|..||....     .....+..+.....+...+..+.
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (286)
T cd06622         160 TNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQ  239 (286)
T ss_pred             cCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHH
Confidence            346788899999986421    135789999999999999999999986532     12233334444555667889999


Q ss_pred             HHHHHHcccCCCCCCCHHHHhhCCCCCCCCCC
Q 032788           88 DFILKCLQVNPNDRPTAAQLMEHPFVKRPLPT  119 (133)
Q Consensus        88 ~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~~  119 (133)
                      +++.+||..+|.+||++++++.|+|+......
T Consensus       240 ~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~  271 (286)
T cd06622         240 DFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA  271 (286)
T ss_pred             HHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence            99999999999999999999999999776544

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.69  E-value=1.9e-16  Score=110.43  Aligned_cols=101  Identities=30%  Similarity=0.514  Sum_probs=76.6

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh--CC-----------------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR--GE-----------------   74 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~--~~-----------------   74 (133)
                      +..+.|.+|+|||+++.. ..|+.++|+|++||+++|+..-++.|-+.+  +++.++-.  |.                 
T Consensus       167 TeYVSTRWYRAPEvLLrs-~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mn  245 (538)
T KOG0661|consen  167 TEYVSTRWYRAPEVLLRS-GYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMN  245 (538)
T ss_pred             chhhhcccccchHHhhhc-cccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhc
Confidence            345899999999999864 568999999999999999988777776654  23322211  10                 


Q ss_pred             --CCCC--------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           75 --LPPI--------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        75 --~~~~--------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                        .+..        -...+.++.+++.+|+.+||.+||+++|+++||||+-..
T Consensus       246 f~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~  298 (538)
T KOG0661|consen  246 FRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGR  298 (538)
T ss_pred             cCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccc
Confidence              0110        112567899999999999999999999999999997543

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.69  E-value=4.7e-17  Score=113.96  Aligned_cols=97  Identities=28%  Similarity=0.378  Sum_probs=74.0

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh-CCCCCCC--CCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR-GELPPIP--DSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~-~~~~~~~--~~~~~~~~~~~~   91 (133)
                      +.+||+.|+|||++..  ..++.++|+||+||++|++++|..||....  .....+.. ......+  ...+.++.+++.
T Consensus       207 ~~~gt~~Y~aPE~~~~--~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~  284 (381)
T cd05626         207 SLVGTPNYIAPEVLLR--KGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLIT  284 (381)
T ss_pred             cccCCccccCHHHHcC--CCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHH
Confidence            4689999999999987  458999999999999999999999997654  22222222 1112222  356889999999


Q ss_pred             HHc--ccCCCCCCCHHHHhhCCCCCC
Q 032788           92 KCL--QVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        92 ~~l--~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      +++  ..++..|+++++++.||||..
T Consensus       285 ~ll~~~~~~~~R~~~~~~l~hp~f~~  310 (381)
T cd05626         285 KLCCSAEERLGRNGADDIKAHPFFSE  310 (381)
T ss_pred             HHccCcccccCCCCHHHHhcCcccCC
Confidence            854  455566999999999999975

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.69  E-value=1.8e-16  Score=104.69  Aligned_cols=94  Identities=33%  Similarity=0.658  Sum_probs=78.9

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ..|++.|++||....  ..++.++|+|++|++++++++|..||....  ..............+...+..+.+++..||.
T Consensus       163 ~~~~~~y~~pe~~~~--~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  240 (258)
T cd08215         163 VVGTPYYLSPELCQN--KPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPSQYSSELRNLVSSLLQ  240 (258)
T ss_pred             eeeeecccChhHhcc--CCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcC
Confidence            478889999999876  347889999999999999999999987653  3333444455556667788999999999999


Q ss_pred             cCCCCCCCHHHHhhCCCC
Q 032788           96 VNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~~~~  113 (133)
                      .+|++||+++++++||||
T Consensus       241 ~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         241 KDPEERPSIAQILQSPFI  258 (258)
T ss_pred             CChhhCcCHHHHhcCCCC
Confidence            999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.68  E-value=3.3e-16  Score=106.69  Aligned_cols=100  Identities=21%  Similarity=0.244  Sum_probs=73.3

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCC------------------CC
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELP------------------PI   78 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~------------------~~   78 (133)
                      .++..|+|||.+... ..++.++|+||+|+++|++++|..||.+..  ..+..+......                  ..
T Consensus       169 ~~~~~y~aPE~~~~~-~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (309)
T cd07845         169 VVTLWYRAPELLLGC-TTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTL  247 (309)
T ss_pred             cccccccChhhhcCC-CCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccc
Confidence            456789999998652 347889999999999999999999987543  222222111000                  00


Q ss_pred             C-----------CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCCC
Q 032788           79 P-----------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPT  119 (133)
Q Consensus        79 ~-----------~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~~  119 (133)
                      +           ...+..+.+++.+|+..||.+|+++++++.|+||.+....
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~  299 (309)
T cd07845         248 PKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLP  299 (309)
T ss_pred             cCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCC
Confidence            0           1146778899999999999999999999999999865443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.68  E-value=3e-16  Score=106.53  Aligned_cols=103  Identities=23%  Similarity=0.313  Sum_probs=75.5

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC---------------------C
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG---------------------E   74 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~---------------------~   74 (133)
                      ..++..|++||.+... ..++.++|+||+|+++|++++|..||....  .....+...                     .
T Consensus       164 ~~~~~~y~~PE~~~~~-~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (301)
T cd07873         164 EVVTLWYRPPDILLGS-TDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYN  242 (301)
T ss_pred             cceeecccCcHHHhCC-CCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccc
Confidence            4678899999998753 347889999999999999999999997543  111111100                     0


Q ss_pred             CCC--------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCCCCC
Q 032788           75 LPP--------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSW  121 (133)
Q Consensus        75 ~~~--------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~~~~  121 (133)
                      .+.        ....++..+.+++.+|+..||.+|++++++++|+||...-...+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~~~~  297 (301)
T cd07873         243 YPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGERIH  297 (301)
T ss_pred             cCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccchhh
Confidence            000        01235678899999999999999999999999999986554433

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.68  E-value=1.5e-17  Score=113.81  Aligned_cols=96  Identities=26%  Similarity=0.416  Sum_probs=78.7

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..+|++.|++||.+..  ..++.++|+||+|+++|++++|..||....  .....+. ......+...+..+.+++..||
T Consensus       157 ~~~g~~~y~aPE~~~~--~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~-~~~~~~p~~~~~~~~~li~~~l  233 (318)
T cd05582         157 SFCGTVEYMAPEVVNR--RGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMIL-KAKLGMPQFLSPEAQSLLRALF  233 (318)
T ss_pred             cccCChhhcCHHHHcC--CCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCHHHHHHHHHHh
Confidence            4579999999999987  447889999999999999999999997654  2233332 2233456678899999999999


Q ss_pred             ccCCCCCCC-----HHHHhhCCCCCC
Q 032788           95 QVNPNDRPT-----AAQLMEHPFVKR  115 (133)
Q Consensus        95 ~~~p~~R~s-----~~~~l~~~~~~~  115 (133)
                      ..||.+|++     +++++.|+||..
T Consensus       234 ~~~P~~R~~a~~~~~~~~~~~~~~~~  259 (318)
T cd05582         234 KRNPANRLGAGPDGVEEIKRHPFFST  259 (318)
T ss_pred             hcCHhHcCCCCCCCHHHHhCCCCcCC
Confidence            999999999     788999999975

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.68  E-value=2.4e-16  Score=104.78  Aligned_cols=94  Identities=27%  Similarity=0.594  Sum_probs=76.5

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ..|+..|++||....  ..++.++|+|++|+++|+++++..||....  ........+..+..+...+..+.+++.+||.
T Consensus       165 ~~~~~~~~~pe~~~~--~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  242 (260)
T cd08222         165 FTGTPYYMSPEALKH--QGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNSIMQSMLN  242 (260)
T ss_pred             CCCCcCccCHHHHcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCCcchhcHHHHHHHHHHhc
Confidence            467888999999876  447889999999999999999999986543  2223333444445566778899999999999


Q ss_pred             cCCCCCCCHHHHhhCCCC
Q 032788           96 VNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~~~~  113 (133)
                      .+|++||+++++++|||+
T Consensus       243 ~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         243 KDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             CChhhCcCHHHHhhCCCC
Confidence            999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=4.5e-17  Score=112.59  Aligned_cols=97  Identities=31%  Similarity=0.468  Sum_probs=76.5

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC-CCCCCC--CCCCHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG-ELPPIP--DSVSRDARDFI   90 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~-~~~~~~--~~~~~~~~~~~   90 (133)
                      ....||+.|+|||++..  ..++.++|+||+||++|+|++|..||....  .....+... .....+  ...+..+.+++
T Consensus       188 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li  265 (350)
T cd05573         188 NSTVGTPDYIAPEVLRG--TPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLI  265 (350)
T ss_pred             cccccCccccCHHHHcC--CCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHH
Confidence            34579999999999987  458999999999999999999999997654  222222220 111222  23589999999


Q ss_pred             HHHcccCCCCCCC-HHHHhhCCCCCC
Q 032788           91 LKCLQVNPNDRPT-AAQLMEHPFVKR  115 (133)
Q Consensus        91 ~~~l~~~p~~R~s-~~~~l~~~~~~~  115 (133)
                      .+|+. +|.+|++ ++++++|||+.+
T Consensus       266 ~~ll~-dp~~R~~s~~~ll~hp~~~~  290 (350)
T cd05573         266 CRLLC-DPEDRLGSFEEIKSHPFFKG  290 (350)
T ss_pred             HHHcc-ChhhcCCCHHHHhcCCCcCC
Confidence            99997 9999999 999999999976

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.68  E-value=1.8e-16  Score=106.56  Aligned_cols=101  Identities=34%  Similarity=0.510  Sum_probs=76.9

Q ss_pred             hcccccccccccccccc---CCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC--CCCCCCCCHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNS---KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL--PPIPDSVSRDARD   88 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~---~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~   88 (133)
                      ....|+..|++||.+..   ....++.++|+||+|+++|++++|..||....  ...........  ...+...+..+.+
T Consensus       161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (282)
T cd06643         161 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKD  240 (282)
T ss_pred             ccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHH
Confidence            34578899999999842   11346789999999999999999999987654  22222222221  1234557789999


Q ss_pred             HHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           89 FILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        89 ~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      ++..||..+|.+||+++++++|+|+...
T Consensus       241 li~~~l~~~p~~Rp~~~~il~~~~~~~~  268 (282)
T cd06643         241 FLKKCLEKNVDARWTTTQLLQHPFVTVN  268 (282)
T ss_pred             HHHHHccCChhhCcCHHHHhcCCCEecc
Confidence            9999999999999999999999999764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.68  E-value=8.1e-17  Score=121.75  Aligned_cols=97  Identities=16%  Similarity=0.245  Sum_probs=72.8

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccC
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQVN   97 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   97 (133)
                      .+||+.|+|||++.+  ..|+.++||||+||++|||+++..|+.........+.....+............++..||..+
T Consensus       175 ~~gt~~Y~APE~~~~--~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~  252 (793)
T PLN00181        175 AMEMSWYTSPEEDNG--SSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHRVLPPQILLNWPKEASFCLWLLHPE  252 (793)
T ss_pred             cCCCcceEChhhhcc--CCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHhhcChhhhhcCHHHHHHHHHhCCCC
Confidence            478999999999987  458999999999999999999888775433222222222222211223455678889999999


Q ss_pred             CCCCCCHHHHhhCCCCCCC
Q 032788           98 PNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        98 p~~R~s~~~~l~~~~~~~~  116 (133)
                      |.+||++.++++|||+...
T Consensus       253 P~~Rps~~eil~h~~~~~~  271 (793)
T PLN00181        253 PSCRPSMSELLQSEFINEP  271 (793)
T ss_pred             hhhCcChHHHhhchhhhhh
Confidence            9999999999999999753

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.68  E-value=1.4e-16  Score=107.09  Aligned_cols=98  Identities=18%  Similarity=0.337  Sum_probs=75.0

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHH-HHHHhCCCCCCCCCCCHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WAL-FKIARGELPPIPDSVSRDARDFI   90 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~   90 (133)
                      ...|+..|+|||.+..  ..++.++|+||+|+++|++++|..||....     ... ...............+..+.+++
T Consensus       153 ~~~~~~~y~aPE~~~~--~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  230 (277)
T cd05607         153 QRAGTNGYMAPEILKE--EPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDIC  230 (277)
T ss_pred             ccCCCCCccCHHHHcc--CCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHH
Confidence            3578899999999987  348999999999999999999999986532     111 11111111112235788999999


Q ss_pred             HHHcccCCCCCCCH----HHHhhCCCCCCC
Q 032788           91 LKCLQVNPNDRPTA----AQLMEHPFVKRP  116 (133)
Q Consensus        91 ~~~l~~~p~~R~s~----~~~l~~~~~~~~  116 (133)
                      ..||..||.+|+++    ++++.|+||+..
T Consensus       231 ~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~  260 (277)
T cd05607         231 RLFLAKKPEDRLGSREKNDDPRKHEFFKTI  260 (277)
T ss_pred             HHHhccCHhhCCCCccchhhhhcChhhcCC
Confidence            99999999999998    678899999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.68  E-value=1.5e-16  Score=120.85  Aligned_cols=99  Identities=18%  Similarity=0.323  Sum_probs=77.2

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HH-HHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WA-LFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ..+||+.|+|||++......++.++|||||||++|+|++|..||....  .. +..+..... ......+..+.+|+..|
T Consensus       200 s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~-lpi~~~S~eL~dLI~~~  278 (1021)
T PTZ00266        200 SCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPD-LPIKGKSKELNILIKNL  278 (1021)
T ss_pred             ccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCC-CCcCCCCHHHHHHHHHH
Confidence            347999999999987533457889999999999999999999997544  22 222222221 11234678999999999


Q ss_pred             cccCCCCCCCHHHHhhCCCCCCC
Q 032788           94 LQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      |..+|.+||++.|++.|+|+...
T Consensus       279 L~~dPeeRPSa~QlL~h~~ik~i  301 (1021)
T PTZ00266        279 LNLSAKERPSALQCLGYQIIKNV  301 (1021)
T ss_pred             hcCChhHCcCHHHHhccHHHhhc
Confidence            99999999999999999999754

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.68  E-value=4.2e-18  Score=115.74  Aligned_cols=102  Identities=27%  Similarity=0.461  Sum_probs=76.0

Q ss_pred             hhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHH--hCCCCC-------------
Q 032788           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIA--RGELPP-------------   77 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~--~~~~~~-------------   77 (133)
                      +.+.+.|..|.|||++.+  -+|+..+|+||.||+++|+.+|...|.+-+  +.+..+.  .+..+.             
T Consensus       266 hs~iVsTRHYRAPEViLg--LGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~  343 (415)
T KOG0671|consen  266 HSTIVSTRHYRAPEVILG--LGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFR  343 (415)
T ss_pred             cceeeeccccCCchheec--cCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhh
Confidence            456799999999999999  569999999999999999999988886532  3222111  111100             


Q ss_pred             ----------------------CC--------CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           78 ----------------------IP--------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        78 ----------------------~~--------~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                                            .|        .-.-..+.+++++|+..||.+|+|+.|++.||||....+
T Consensus       344 ~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~~  414 (415)
T KOG0671|consen  344 RGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARLTP  414 (415)
T ss_pred             cccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcCCC
Confidence                                  00        001135789999999999999999999999999987543

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.68  E-value=1.4e-16  Score=106.91  Aligned_cols=97  Identities=30%  Similarity=0.552  Sum_probs=77.1

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ..|+..|++||.+..  ..++.++|+||+|+++|++++|..|+....  .....+.....+......+..+.+++.+||.
T Consensus       161 ~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  238 (277)
T cd06642         161 FVGTPFWMAPEVIKQ--SAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFVEACLN  238 (277)
T ss_pred             ccCcccccCHHHhCc--CCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCCCCCcccCHHHHHHHHHHcc
Confidence            468889999999987  457899999999999999999999986543  2222222333333445677889999999999


Q ss_pred             cCCCCCCCHHHHhhCCCCCCC
Q 032788           96 VNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      .+|.+||++.++++|+|+...
T Consensus       239 ~~p~~Rp~~~~il~~~~~~~~  259 (277)
T cd06642         239 KDPRFRPTAKELLKHKFITRY  259 (277)
T ss_pred             CCcccCcCHHHHHHhHHHHHH
Confidence            999999999999999998754

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=2.3e-16  Score=105.23  Aligned_cols=97  Identities=32%  Similarity=0.605  Sum_probs=73.4

Q ss_pred             ccccccccccccccccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCC--CCCCCHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSK---NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDARDF   89 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~---~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~   89 (133)
                      ...|+..|+|||.+...   ...++.++|+|++|+++|++++|..||....  .....+........  +...+..+.++
T Consensus       172 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  251 (275)
T cd06608         172 TFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDF  251 (275)
T ss_pred             CccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHH
Confidence            45788899999987531   1346788999999999999999999997543  23333333322221  22356789999


Q ss_pred             HHHHcccCCCCCCCHHHHhhCCCC
Q 032788           90 ILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        90 ~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                      +.+||..||++||+++++++|||+
T Consensus       252 i~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         252 ISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             HHHHhhcChhhCcCHHHHhcCCCC
Confidence            999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.67  E-value=2.7e-16  Score=105.71  Aligned_cols=95  Identities=28%  Similarity=0.442  Sum_probs=70.8

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH--HHHHHHhC----------------------
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARG----------------------   73 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~--~~~~~~~~----------------------   73 (133)
                      ..++..|+|||.+... ..++.++|+||+|+++|++++|..||.+...  ........                      
T Consensus       161 ~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (285)
T cd07861         161 EVVTLWYRAPEVLLGS-PRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTF  239 (285)
T ss_pred             CcccccccChHHhcCC-CCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhc
Confidence            3668889999988653 3468899999999999999999999975431  11110000                      


Q ss_pred             ------CCCCCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           74 ------ELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        74 ------~~~~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                            .........+.++.+++.+||..||.+||++++++.|+||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         240 PKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             cccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence                  0000122467788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.67  E-value=1.9e-16  Score=106.34  Aligned_cols=97  Identities=30%  Similarity=0.541  Sum_probs=76.8

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ..++..|++||.+..  ..++.++|+||+|+++|++++|..||....  .....+.....+..+...+..+.+++.+||.
T Consensus       161 ~~~~~~y~apE~~~~--~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  238 (277)
T cd06640         161 FVGTPFWMAPEVIQQ--SAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFIDACLN  238 (277)
T ss_pred             ccCcccccCHhHhcc--CCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCCCCCchhhhHHHHHHHHHHcc
Confidence            467888999999876  347899999999999999999999987543  2222222233334445567889999999999


Q ss_pred             cCCCCCCCHHHHhhCCCCCCC
Q 032788           96 VNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      .+|.+||+++++++|+|+...
T Consensus       239 ~~p~~Rp~~~~il~~~~~~~~  259 (277)
T cd06640         239 KDPSFRPTAKELLKHKFIVKN  259 (277)
T ss_pred             cCcccCcCHHHHHhChHhhhc
Confidence            999999999999999999654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.67  E-value=1.2e-17  Score=127.11  Aligned_cols=100  Identities=38%  Similarity=0.662  Sum_probs=86.8

Q ss_pred             hhccccccccccccccccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhCCCCCCCCCCCHHHHHHH
Q 032788           15 RKWHVSRWNSLTDQVVNSKN-GGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELPPIPDSVSRDARDFI   90 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~-~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (133)
                      .+...||+-|||||++.+.. .+...+.||||+|||+.||.+|+.||...+   ...+++.-+-.++.|..++.+.++|+
T Consensus      1395 l~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFl 1474 (1509)
T KOG4645|consen 1395 LQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFL 1474 (1509)
T ss_pred             HHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhhhHhHHHHH
Confidence            34679999999999998632 346789999999999999999999997655   34567777777888999999999999


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFVK  114 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~~  114 (133)
                      .+|+..||..|.++.|+++|.|-+
T Consensus      1475 e~Cl~~dP~~Rw~~~qlle~~f~~ 1498 (1509)
T KOG4645|consen 1475 EHCLEQDPKMRWTASQLLEHAFGK 1498 (1509)
T ss_pred             HHHHhcCchhhhHHHHHHHhhccc
Confidence            999999999999999999998765

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.67  E-value=4.8e-16  Score=105.07  Aligned_cols=100  Identities=38%  Similarity=0.582  Sum_probs=76.0

Q ss_pred             cccccccccccccccc---CCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCC--CCCCCCCHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNS---KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELP--PIPDSVSRDARDF   89 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~---~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~   89 (133)
                      ...++..|++||.+..   ....++.++|+||+|+++|++++|..||....  ...........+  ..+...+..+.++
T Consensus       169 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  248 (292)
T cd06644         169 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDF  248 (292)
T ss_pred             eecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHH
Confidence            3467889999999853   11346789999999999999999999986643  222222222221  2234567889999


Q ss_pred             HHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           90 ILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        90 ~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      +.+||..+|++||+++++++|||+...
T Consensus       249 i~~~l~~~p~~Rp~~~~il~~~~~~~~  275 (292)
T cd06644         249 LKTALDKHPETRPSAAQLLEHPFVSSV  275 (292)
T ss_pred             HHHHhcCCcccCcCHHHHhcCcccccc
Confidence            999999999999999999999999754

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.67  E-value=3.7e-16  Score=104.58  Aligned_cols=94  Identities=29%  Similarity=0.457  Sum_probs=74.4

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH------HHHHHHhCCCCCCCCCCCHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW------ALFKIARGELPPIPDSVSRDARDFIL   91 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (133)
                      ..|+..|+|||.+..  ..++.++|+||+|+++|++++|..||.....      .+.... ......+...+..+.+++.
T Consensus       166 ~~~~~~y~aPE~~~~--~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~  242 (267)
T PHA03390        166 YDGTLDYFSPEKIKG--HNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKKLPFIKNVSKNANDFVQ  242 (267)
T ss_pred             CCCCCcccChhhhcC--CCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cccCCcccccCHHHHHHHH
Confidence            468889999999987  4588999999999999999999999974321      111111 2222334467899999999


Q ss_pred             HHcccCCCCCCC-HHHHhhCCCCC
Q 032788           92 KCLQVNPNDRPT-AAQLMEHPFVK  114 (133)
Q Consensus        92 ~~l~~~p~~R~s-~~~~l~~~~~~  114 (133)
                      .||..+|.+|++ ++++++|+||.
T Consensus       243 ~~l~~~p~~R~~~~~~~l~h~~~~  266 (267)
T PHA03390        243 SMLKYNINYRLTNYNEIIKHPFLK  266 (267)
T ss_pred             HHhccChhhCCchHHHHhcCCccc
Confidence            999999999996 69999999986

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.67  E-value=3.6e-16  Score=104.86  Aligned_cols=96  Identities=28%  Similarity=0.438  Sum_probs=70.5

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh--CC---------------CCC
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR--GE---------------LPP   77 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~--~~---------------~~~   77 (133)
                      ...++..|++||.+... ..++.++|+||+|+++|++++|..||.+.+  ........  +.               ...
T Consensus       157 ~~~~~~~y~aPE~~~~~-~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (282)
T cd07831         157 EYISTRWYRAPECLLTD-GYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYN  235 (282)
T ss_pred             CCCCCcccCChhHhhcC-CCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccccccc
Confidence            34678899999987542 346889999999999999999999996543  11111110  00               000


Q ss_pred             C-----------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           78 I-----------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        78 ~-----------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                      .           ....+..+.+++.+||..+|.+||+++++++||||
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         236 FPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             CcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence            0           12356889999999999999999999999999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.67  E-value=4.8e-16  Score=104.52  Aligned_cols=95  Identities=31%  Similarity=0.498  Sum_probs=70.0

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCC-C-------------------
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGE-L-------------------   75 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~-~-------------------   75 (133)
                      ..++..|++||.+.+. ..++.++|+|++|+++|++++|+.||.+..  .......... .                   
T Consensus       160 ~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd07860         160 EVVTLWYRAPEILLGC-KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSF  238 (284)
T ss_pred             ccccccccCCeEEecC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhc
Confidence            3567889999988753 335788999999999999999999986543  1111111100 0                   


Q ss_pred             C--------CCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           76 P--------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        76 ~--------~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                      .        .....++..+.+++.+|+..||.+||+++++++||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         239 PKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             ccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence            0        0012356788899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.67  E-value=6.1e-17  Score=112.59  Aligned_cols=97  Identities=26%  Similarity=0.367  Sum_probs=75.1

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC-CCCCCC--CCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG-ELPPIP--DSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~-~~~~~~--~~~~~~~~~~~~   91 (133)
                      ..+||+.|+|||++..  ..++.++|+||+||++|++++|..||.+..  .....+... .....+  ..++..+.+++.
T Consensus       198 ~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  275 (364)
T cd05599         198 STVGTPDYIAPEVFLQ--TGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIK  275 (364)
T ss_pred             ccccCccccCHHHHcC--CCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHH
Confidence            3579999999999987  458999999999999999999999997654  222222221 111222  246789999999


Q ss_pred             HHcccCCCCCCC---HHHHhhCCCCCCC
Q 032788           92 KCLQVNPNDRPT---AAQLMEHPFVKRP  116 (133)
Q Consensus        92 ~~l~~~p~~R~s---~~~~l~~~~~~~~  116 (133)
                      +|+. +|.+|++   ++++++||||+..
T Consensus       276 ~ll~-~p~~R~~~~~~~~ll~h~~~~~~  302 (364)
T cd05599         276 RLCC-EAERRLGNNGVNEIKSHPFFKGV  302 (364)
T ss_pred             HHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence            9986 8999987   9999999999753

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.67  E-value=2.3e-16  Score=106.95  Aligned_cols=100  Identities=33%  Similarity=0.568  Sum_probs=77.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCC--CCCCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELP--PIPDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~   92 (133)
                      ...|++.|++||.+..  ..++.++|+|++|+++|++++|..||....  ...........+  ..+......+.+++.+
T Consensus       175 ~~~~~~~y~aPE~~~~--~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  252 (296)
T cd06654         175 TMVGTPYWMAPEVVTR--KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNR  252 (296)
T ss_pred             cccCCccccCHHHHcC--CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHH
Confidence            3478889999999887  447889999999999999999999997654  222222211111  2244577889999999


Q ss_pred             HcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           93 CLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      ||..+|.+||+++++++|+|+....+
T Consensus       253 ~l~~~p~~Rpt~~eil~~~~~~~~~~  278 (296)
T cd06654         253 CLDMDVEKRGSAKELLQHQFLKIAKP  278 (296)
T ss_pred             HCcCCcccCcCHHHHhhChhhhccCC
Confidence            99999999999999999999976544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.67  E-value=2.9e-16  Score=105.50  Aligned_cols=91  Identities=20%  Similarity=0.445  Sum_probs=74.6

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..++..|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+.++.....+..++.++.+++.+||
T Consensus       186 ~~~~~~y~aPE~~~~--~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~  263 (283)
T cd05048         186 SLLPVRWMPPEAILY--GKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLLPCPEDCPARVYALMIECW  263 (283)
T ss_pred             CcccccccCHHHhcc--CcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHc
Confidence            456778999999876  448899999999999999997 888987643  334444555555667778999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032788           95 QVNPNDRPTAAQLMEH  110 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~  110 (133)
                      ..+|.+||++.+++++
T Consensus       264 ~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         264 NEIPARRPRFKDIHTR  279 (283)
T ss_pred             cCChhhCcCHHHHHHH
Confidence            9999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.67  E-value=8.4e-17  Score=111.93  Aligned_cols=102  Identities=22%  Similarity=0.326  Sum_probs=85.5

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHHHHHHhCCCCCCCCCCCHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WALFKIARGELPPIPDSVSRDARDFI   90 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (133)
                      ...+||.+|||||++..  ..|+...|.|++||++|+|+.|..||...+     +.+.+........++...+.+.+++.
T Consensus       344 ~~rvGT~GYMAPEvl~n--e~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~eakslc  421 (591)
T KOG0986|consen  344 RGRVGTVGYMAPEVLQN--EVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEAKSLC  421 (591)
T ss_pred             ccccCcccccCHHHHcC--CcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccccCHHHHHHH
Confidence            34599999999999998  449999999999999999999999997644     34555555556677889999999999


Q ss_pred             HHHcccCCCCCC-----CHHHHhhCCCCCCCCCC
Q 032788           91 LKCLQVNPNDRP-----TAAQLMEHPFVKRPLPT  119 (133)
Q Consensus        91 ~~~l~~~p~~R~-----s~~~~l~~~~~~~~~~~  119 (133)
                      +.+|..||.+|.     .++++.+||||+.....
T Consensus       422 ~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~  455 (591)
T KOG0986|consen  422 EGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWR  455 (591)
T ss_pred             HHHHccCHHHhccCCCcCcchhhhCcccccCCHh
Confidence            999999999986     46789999999975443

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.67  E-value=3.6e-16  Score=105.14  Aligned_cols=95  Identities=26%  Similarity=0.410  Sum_probs=69.2

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhCC-------------------C
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGE-------------------L   75 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~~-------------------~   75 (133)
                      ..++..|+|||.+.+. ..++.++|+||+|+++|++++|..|+....   ..+..+....                   .
T Consensus       159 ~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
T cd07839         159 EVVTLWYRPPDVLFGA-KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPY  237 (284)
T ss_pred             CccccCCcChHHHhCC-cccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccccccc
Confidence            4678889999998763 346889999999999999999888864321   1111111100                   0


Q ss_pred             CC---------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           76 PP---------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        76 ~~---------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                      ..         ....++..+.+++.+||..||.+|||+++++.|+||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         238 PMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             CCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence            00         012356788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.67  E-value=7.8e-16  Score=106.37  Aligned_cols=97  Identities=27%  Similarity=0.399  Sum_probs=72.0

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC-----------------------
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG-----------------------   73 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~-----------------------   73 (133)
                      .|+..|+|||.+... ..++.++|+||+|+++|++++|..||....  .........                       
T Consensus       179 ~~~~~y~aPE~~~~~-~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (342)
T cd07854         179 LVTKWYRSPRLLLSP-NNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRND  257 (342)
T ss_pred             cccccccCHHHHhCc-cccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhc
Confidence            578889999987642 347889999999999999999999996532  111111100                       


Q ss_pred             -CCCC-----CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           74 -ELPP-----IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        74 -~~~~-----~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                       ....     .......++.+++..|+..||.+|+++++++.|+||+..
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~  306 (342)
T cd07854         258 GGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCY  306 (342)
T ss_pred             ccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccc
Confidence             0000     012456788999999999999999999999999999864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.67  E-value=5.1e-17  Score=111.53  Aligned_cols=96  Identities=21%  Similarity=0.301  Sum_probs=77.2

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..+||+.|+|||++..  ..++.++|+||+|+++|++++|..||...+  .....+.... ...+...+..+.+++.+|+
T Consensus       155 ~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~ll  231 (325)
T cd05604         155 TFCGTPEYLAPEVIRK--QPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKP-LVLRPGASLTAWSILEELL  231 (325)
T ss_pred             cccCChhhCCHHHHcC--CCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCC-ccCCCCCCHHHHHHHHHHh
Confidence            4579999999999987  458899999999999999999999997654  2233333322 2334467889999999999


Q ss_pred             ccCCCCCCCH----HHHhhCCCCCC
Q 032788           95 QVNPNDRPTA----AQLMEHPFVKR  115 (133)
Q Consensus        95 ~~~p~~R~s~----~~~l~~~~~~~  115 (133)
                      ..+|.+|+++    ++++.|+||..
T Consensus       232 ~~~p~~R~~~~~~~~~i~~h~~f~~  256 (325)
T cd05604         232 EKDRQRRLGAKEDFLEIQEHPFFES  256 (325)
T ss_pred             ccCHHhcCCCCCCHHHHhcCCCcCC
Confidence            9999999865    58999999975

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.67  E-value=1e-16  Score=109.79  Aligned_cols=97  Identities=19%  Similarity=0.320  Sum_probs=77.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ..+||+.|+|||.+..  ..++.++|+||+|+++|++++|..||...+ ..............+......+.+++..|+.
T Consensus       155 ~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~  232 (321)
T cd05603         155 TFCGTPEYLAPEVLRK--EPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGGKTVAACDLLVGLLH  232 (321)
T ss_pred             cccCCcccCCHHHhcC--CCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcc
Confidence            4579999999999987  458899999999999999999999997754 2222222233345566778899999999999


Q ss_pred             cCCCCCCCH----HHHhhCCCCCC
Q 032788           96 VNPNDRPTA----AQLMEHPFVKR  115 (133)
Q Consensus        96 ~~p~~R~s~----~~~l~~~~~~~  115 (133)
                      .+|.+|++.    .++++|+||..
T Consensus       233 ~~p~~R~~~~~~~~~~~~~~~~~~  256 (321)
T cd05603         233 KDQRRRLGAKADFLEIKNHVFFSP  256 (321)
T ss_pred             CCHhhcCCCCCCHHHHhCCCCcCC
Confidence            999999864    58999999964

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.67  E-value=2.8e-16  Score=104.56  Aligned_cols=97  Identities=21%  Similarity=0.377  Sum_probs=78.2

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH----HHHHHHHh-CCCCCCCCCCCHHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIAR-GELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ..|+..|++||.+..  ..++.++|+|++|+++|++++|..||....    .....+.. ......+...+..+.+++.+
T Consensus       152 ~~~~~~~~~PE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  229 (262)
T cd05572         152 FCGTPEYVAPEIILN--KGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQ  229 (262)
T ss_pred             ccCCcCccChhHhcC--CCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHH
Confidence            478889999999876  447899999999999999999999996544    12222221 33344566668899999999


Q ss_pred             HcccCCCCCCC-----HHHHhhCCCCCCC
Q 032788           93 CLQVNPNDRPT-----AAQLMEHPFVKRP  116 (133)
Q Consensus        93 ~l~~~p~~R~s-----~~~~l~~~~~~~~  116 (133)
                      ||..+|.+|++     ++|+++||||...
T Consensus       230 ~l~~~p~~R~~~~~~~~~~l~~~~~~~~~  258 (262)
T cd05572         230 LLRRNPEERLGNLKGGIKDIKKHKWFNGF  258 (262)
T ss_pred             HccCChhhCcCCcccCHHHHhcChhhhCC
Confidence            99999999999     9999999999864

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.67  E-value=3.5e-16  Score=106.62  Aligned_cols=100  Identities=28%  Similarity=0.499  Sum_probs=74.3

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-HHHHHHHh----------------------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIAR----------------------   72 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-~~~~~~~~----------------------   72 (133)
                      ...+|+..|++||.+.+  ..++.++|+||+|+++|++++|..||...+ ........                      
T Consensus       156 ~~~~~~~~~~aPE~~~~--~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (308)
T cd06615         156 NSFVGTRSYMSPERLQG--THYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDS  233 (308)
T ss_pred             ccCCCCcCccChhHhcC--CCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCc
Confidence            34578899999999876  447889999999999999999999986433 11111110                      


Q ss_pred             ---------------CCCCCCC-CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           73 ---------------GELPPIP-DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        73 ---------------~~~~~~~-~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                                     ...+..+ ...+.++.+++.+||..+|++||+++++++|+||.+..
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~  294 (308)
T cd06615         234 PRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAE  294 (308)
T ss_pred             cchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhcc
Confidence                           0001111 12567899999999999999999999999999997643

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.67  E-value=9e-17  Score=110.30  Aligned_cols=96  Identities=20%  Similarity=0.297  Sum_probs=77.3

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..+||+.|+|||++..  ..++.++|+||+|+++|++++|..||.+..  .....+... ....+...+..+.+++.+|+
T Consensus       155 ~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~li~~~l  231 (325)
T cd05602         155 TFCGTPEYLAPEVLHK--QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK-PLQLKPNITNSARHLLEGLL  231 (325)
T ss_pred             cccCCccccCHHHHcC--CCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC-CcCCCCCCCHHHHHHHHHHc
Confidence            4589999999999987  458899999999999999999999997654  222333222 23445568899999999999


Q ss_pred             ccCCCCCCCHH----HHhhCCCCCC
Q 032788           95 QVNPNDRPTAA----QLMEHPFVKR  115 (133)
Q Consensus        95 ~~~p~~R~s~~----~~l~~~~~~~  115 (133)
                      ..+|.+|+++.    ++++|+|+..
T Consensus       232 ~~~p~~R~~~~~~~~~i~~~~~~~~  256 (325)
T cd05602         232 QKDRTKRLGAKDDFMEIKNHIFFSP  256 (325)
T ss_pred             ccCHHHCCCCCCCHHHHhcCcccCC
Confidence            99999999765    8999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.67  E-value=3.8e-16  Score=105.05  Aligned_cols=101  Identities=24%  Similarity=0.352  Sum_probs=80.4

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH----HHHHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ..+|+..|++||.+... ..++.++|+||+|+++|++++|..||....    ..............+...+..+.+++.+
T Consensus       154 ~~~~~~~y~aPE~~~~~-~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~  232 (278)
T cd05606         154 ASVGTHGYMAPEVLQKG-VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEG  232 (278)
T ss_pred             CcCCCcCCcCcHHhcCC-CCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHH
Confidence            35789999999998752 247889999999999999999999997542    2222223333345566678999999999


Q ss_pred             HcccCCCCCC-----CHHHHhhCCCCCCCCC
Q 032788           93 CLQVNPNDRP-----TAAQLMEHPFVKRPLP  118 (133)
Q Consensus        93 ~l~~~p~~R~-----s~~~~l~~~~~~~~~~  118 (133)
                      |+..+|.+|+     +++++++||||.+...
T Consensus       233 ~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~  263 (278)
T cd05606         233 LLQRDVNRRLGCLGRGAQEVKEHPFFRSLDW  263 (278)
T ss_pred             HhhcCHHhccCCCCCCHHHHHhCccccCCCc
Confidence            9999999999     9999999999987543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.67  E-value=6e-16  Score=102.47  Aligned_cols=96  Identities=57%  Similarity=0.956  Sum_probs=76.4

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh-CCCCCCCCCCCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR-GELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...|+..|++||.+... ..++.++|+|++|+++|++++|..||....  ........ ...+..+......+.+++.+|
T Consensus       160 ~~~~~~~y~~pe~~~~~-~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  238 (258)
T cd06632         160 SFKGSPYWMAPEVIAQQ-GGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKC  238 (258)
T ss_pred             ccCCCcceeCHHHhcCC-CCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHH
Confidence            45688899999998763 237889999999999999999999986654  22222222 233445566788999999999


Q ss_pred             cccCCCCCCCHHHHhhCCCC
Q 032788           94 LQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~~~~  113 (133)
                      |..+|.+||++++++.|||+
T Consensus       239 l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         239 LQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             hhcCcccCcCHHHHhcCCCC
Confidence            99999999999999999986

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.67  E-value=3.6e-16  Score=104.98  Aligned_cols=100  Identities=35%  Similarity=0.599  Sum_probs=77.3

Q ss_pred             ccccccccccccccccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCC--CCCCCCCHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSK---NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELP--PIPDSVSRDARDF   89 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~---~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~   89 (133)
                      ...|++.|++||.+..+   ...++.++|+||+|+++|++++|..||....  .....+.....+  ..+...+..+.++
T Consensus       162 ~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  241 (280)
T cd06611         162 TFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDF  241 (280)
T ss_pred             eeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHH
Confidence            34788999999997521   1336789999999999999999999997654  223333333222  2244677899999


Q ss_pred             HHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           90 ILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        90 ~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      +..||..+|.+||+++++++|+|+...
T Consensus       242 i~~~l~~~p~~Rps~~~il~~~~~~~~  268 (280)
T cd06611         242 LKSCLVKDPDDRPTAAELLKHPFVSDQ  268 (280)
T ss_pred             HHHHhccChhhCcCHHHHhcChhhccc
Confidence            999999999999999999999999764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.67  E-value=2.3e-16  Score=109.83  Aligned_cols=98  Identities=23%  Similarity=0.343  Sum_probs=72.6

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC-CCCCCC--CCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG-ELPPIP--DSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~-~~~~~~--~~~~~~~~~~~~   91 (133)
                      ..+||+.|+|||++.+  ..++.++|+||+||++|+|++|..||.+..  .....+... .....+  ...+..+.+++.
T Consensus       195 ~~~Gt~~Y~aPE~~~~--~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~  272 (363)
T cd05628         195 STVGTPDYIAPEVFMQ--TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLIL  272 (363)
T ss_pred             cccCCccccCHHHHcC--CCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHH
Confidence            4689999999999987  458999999999999999999999997654  233333321 111222  246788899998


Q ss_pred             HHcc--cCCCCCCCHHHHhhCCCCCCC
Q 032788           92 KCLQ--VNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        92 ~~l~--~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      +++.  .++..|++++++++||||...
T Consensus       273 ~l~~~~~~r~~r~~~~ei~~hp~f~~~  299 (363)
T cd05628         273 RFCCEWEHRIGAPGVEEIKTNPFFEGV  299 (363)
T ss_pred             HHcCChhhcCCCCCHHHHhCCCCCCCC
Confidence            8654  223356899999999999753

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.66  E-value=4.4e-16  Score=107.96  Aligned_cols=99  Identities=26%  Similarity=0.375  Sum_probs=72.7

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC--------------------
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL--------------------   75 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~--------------------   75 (133)
                      ..|+..|+|||.+.+  ..++.++|+||+|+++|++++|+.||...+  .....+.....                    
T Consensus       177 ~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (353)
T cd07850         177 YVVTRYYRAPEVILG--MGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVEN  254 (353)
T ss_pred             CcccccccCHHHHhC--CCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhc
Confidence            467889999999987  458999999999999999999999986432  11111100000                    


Q ss_pred             -CC---------------------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           76 -PP---------------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        76 -~~---------------------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                       +.                     .+...+..+.+++.+||..||.+|+++.+++.|+|++.+..
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~  319 (353)
T cd07850         255 RPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYD  319 (353)
T ss_pred             CCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhccC
Confidence             00                     01123456789999999999999999999999999986544

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.66  E-value=6.5e-16  Score=102.67  Aligned_cols=96  Identities=42%  Similarity=0.829  Sum_probs=74.4

Q ss_pred             cccccccccccccccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhCCCCCCCCC--CCHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKN-GGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELPPIPDS--VSRDARDFIL   91 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~-~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~   91 (133)
                      ..++..|++||.+.... ..++.++|+|++|+++|++++|..||...+   .....+.....+..+..  .+..+.+++.
T Consensus       163 ~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  242 (264)
T cd06626         163 LAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLD  242 (264)
T ss_pred             CcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHH
Confidence            46788999999987631 236889999999999999999999996542   22222333333334443  3788999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                      +||..+|.+||++++++.|+|+
T Consensus       243 ~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         243 RCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             HHccCCcccCCCHHHHhcCCCC
Confidence            9999999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.66  E-value=6.7e-16  Score=102.35  Aligned_cols=95  Identities=25%  Similarity=0.505  Sum_probs=77.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ...|+..|++||.+.+  ..++.++|+||+|+++|++++|..||....  .....+..+.....+...+..+.+++..||
T Consensus       160 ~~~~~~~y~ape~~~~--~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  237 (256)
T cd08221         160 TVVGTPYYMSPELCQG--VKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVYSSELISLVHSLL  237 (256)
T ss_pred             ccCCCccccCHhhcCC--CCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHc
Confidence            4578899999999987  347889999999999999999999987643  333444445444445667889999999999


Q ss_pred             ccCCCCCCCHHHHhhCCCC
Q 032788           95 QVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~~~~  113 (133)
                      ..+|.+||+++++++|+|+
T Consensus       238 ~~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         238 QQDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             ccCcccCCCHHHHhhCcCC
Confidence            9999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.66  E-value=3.8e-16  Score=108.57  Aligned_cols=97  Identities=24%  Similarity=0.344  Sum_probs=68.4

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCh-H-----------HHHHHHHhC--CC-CCCC--
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-E-----------WALFKIARG--EL-PPIP--   79 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~-~-----------~~~~~~~~~--~~-~~~~--   79 (133)
                      ...||..|+|||++..  ..++.++|+||+|+++|+++++..++... .           ..+..+...  .. ...+  
T Consensus       215 ~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  292 (357)
T PHA03209        215 GLAGTVETNAPEVLAR--DKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRD  292 (357)
T ss_pred             cccccccccCCeecCC--CCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCC
Confidence            3578999999999987  45899999999999999998855444221 0           111111110  00 0000  


Q ss_pred             ----------------------------CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           80 ----------------------------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        80 ----------------------------~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                                                  ...+....+++.+||..||.+|||++|+++||||++
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        293 PGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             CccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence                                        123456677999999999999999999999999975

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.66  E-value=7.2e-16  Score=103.61  Aligned_cols=97  Identities=25%  Similarity=0.379  Sum_probs=70.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC-------------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL-------------------   75 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~-------------------   75 (133)
                      ...|+..|++||.+... ..++.++|+|++|+++|++++|.++|.+..  ..+..+.....                   
T Consensus       159 ~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (286)
T cd07832         159 HQVATRWYRAPELLYGA-RKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKI  237 (286)
T ss_pred             cccCcccccCceeeecc-ccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcc
Confidence            35788899999998653 346889999999999999999977775432  11111111000                   


Q ss_pred             --C--------CCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCC
Q 032788           76 --P--------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK  114 (133)
Q Consensus        76 --~--------~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~  114 (133)
                        .        .........+.+++.+|+..+|.+|+++++++.|+||.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         238 TFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             cCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence              0        00113457889999999999999999999999999984

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.66  E-value=3.3e-16  Score=105.69  Aligned_cols=98  Identities=22%  Similarity=0.392  Sum_probs=77.6

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH-----HHHHHHhCCCCCCCCCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-----ALFKIARGELPPIPDSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (133)
                      ...|+..|+|||.+..  ..++.++|+||+|+++|++++|..||.+...     .............+...+..+.+++.
T Consensus       160 ~~~g~~~~~aPE~~~~--~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  237 (285)
T cd05632         160 GRVGTVGYMAPEVLNN--QRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICK  237 (285)
T ss_pred             CCCCCcCccChHHhcC--CCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHH
Confidence            4578999999999977  4588999999999999999999999976431     11111112222345567888999999


Q ss_pred             HHcccCCCCCCC-----HHHHhhCCCCCCC
Q 032788           92 KCLQVNPNDRPT-----AAQLMEHPFVKRP  116 (133)
Q Consensus        92 ~~l~~~p~~R~s-----~~~~l~~~~~~~~  116 (133)
                      .|+..+|.+|++     +++++.|+||+..
T Consensus       238 ~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05632         238 MLLTKDPKQRLGCQEEGAGEVKRHPFFRNM  267 (285)
T ss_pred             HHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence            999999999999     8899999999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.66  E-value=2.6e-16  Score=108.90  Aligned_cols=100  Identities=25%  Similarity=0.409  Sum_probs=83.6

Q ss_pred             hhhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-HHHHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ..+++|||+.|+|||++.+  ..|+..+|.|++|+++||++.|.+||.+.+ ..+...+..-.-.+|.+++++..+++..
T Consensus       506 TTkTFCGTPdYiAPEIi~Y--qPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslSkEAv~ickg  583 (683)
T KOG0696|consen  506 TTKTFCGTPDYIAPEIIAY--QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLSKEAVAICKG  583 (683)
T ss_pred             ceeeecCCCcccccceEEe--cccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcccccHHHHHHHHH
Confidence            3567899999999999999  559999999999999999999999999876 3333333333447788999999999999


Q ss_pred             HcccCCCCCCC-----HHHHhhCCCCCC
Q 032788           93 CLQVNPNDRPT-----AAQLMEHPFVKR  115 (133)
Q Consensus        93 ~l~~~p~~R~s-----~~~~l~~~~~~~  115 (133)
                      .+-..|.+|.-     -+++..|+||+.
T Consensus       584 ~ltK~P~kRLGcg~~ge~di~~H~FFR~  611 (683)
T KOG0696|consen  584 LLTKHPGKRLGCGPEGERDIREHPFFRR  611 (683)
T ss_pred             HhhcCCccccCCCCccccchhhCcchhh
Confidence            99999999953     357899999974

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.66  E-value=7.1e-16  Score=103.68  Aligned_cols=100  Identities=26%  Similarity=0.502  Sum_probs=76.4

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---------HHHHHHHhCCCCCC-CCCCCHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---------WALFKIARGELPPI-PDSVSRD   85 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---------~~~~~~~~~~~~~~-~~~~~~~   85 (133)
                      +..+|+..|++||.+..  ..++.++|+||+|+++|++++|..||....         .....+........ ....+..
T Consensus       151 ~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (279)
T cd06619         151 KTYVGTNAYMAPERISG--EQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEK  228 (279)
T ss_pred             cCCCCChhhcCceeecC--CCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHH
Confidence            34588999999999987  448899999999999999999999986421         11111111222222 2346778


Q ss_pred             HHHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           86 ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        86 ~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      +.+++.+|+..+|.+||++++++.|+|+...-
T Consensus       229 ~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~  260 (279)
T cd06619         229 FVHFITQCMRKQPKERPAPENLMDHPFIVQYN  260 (279)
T ss_pred             HHHHHHHHhhCChhhCCCHHHHhcCccccccc
Confidence            99999999999999999999999999997543

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.66  E-value=2.7e-16  Score=106.71  Aligned_cols=100  Identities=33%  Similarity=0.553  Sum_probs=77.6

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH--HHHHHHhCCC--CCCCCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGEL--PPIPDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~   92 (133)
                      ...|++.|++||.+..  ..++.++|+|++|+++|++++|..||...+.  ..........  ...+...+..+.+++.+
T Consensus       174 ~~~~~~~y~aPE~~~~--~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  251 (297)
T cd06656         174 TMVGTPYWMAPEVVTR--KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNR  251 (297)
T ss_pred             cccCCccccCHHHHcC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHH
Confidence            3478889999999987  4478999999999999999999999976541  1111111111  12344567889999999


Q ss_pred             HcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           93 CLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      ||..+|.+||+++++++|+||....+
T Consensus       252 ~l~~~p~~Rps~~~il~~~~~~~~~~  277 (297)
T cd06656         252 CLEMDVDRRGSAKELLQHPFLKLAKP  277 (297)
T ss_pred             HccCChhhCcCHHHHhcCchhccccc
Confidence            99999999999999999999986544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.66  E-value=4.5e-16  Score=111.35  Aligned_cols=97  Identities=21%  Similarity=0.408  Sum_probs=69.8

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCh---------HHHHHHHHhC-CC--CCCC-----
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV---------EWALFKIARG-EL--PPIP-----   79 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~---------~~~~~~~~~~-~~--~~~~-----   79 (133)
                      ..+||..|++||++.+  ..++.++|+||+||++|+++.+..++...         ...+..+... ..  ...+     
T Consensus       321 ~~~GT~~Y~APE~~~~--~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~  398 (461)
T PHA03211        321 GIAGTVDTNAPEVLAG--DPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGS  398 (461)
T ss_pred             ccCCCcCCcCHHHHcC--CCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcch
Confidence            3579999999999987  45899999999999999998876554321         1112111111 00  0000     


Q ss_pred             --------------------------CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           80 --------------------------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        80 --------------------------~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                                                ......+.+++.+||..||.+||++.|+|+|+||+.
T Consensus       399 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        399 RLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             HHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence                                      123457889999999999999999999999999975

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.66  E-value=7.3e-16  Score=104.44  Aligned_cols=102  Identities=31%  Similarity=0.474  Sum_probs=79.2

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC--CCCCCCHHHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP--IPDSVSRDARDFILKC   93 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~   93 (133)
                      ..|+..|++||.+..  ..++.++|+|++|+++|++++|..||.+..  .....+.......  .....+..+.+++.+|
T Consensus       176 ~~~~~~y~~pE~~~~--~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  253 (292)
T cd06657         176 LVGTPYWMAPELISR--LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRL  253 (292)
T ss_pred             cccCccccCHHHhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHH
Confidence            468889999998876  347889999999999999999999987643  2222222222211  2234678899999999


Q ss_pred             cccCCCCCCCHHHHhhCCCCCCCCCCCC
Q 032788           94 LQVNPNDRPTAAQLMEHPFVKRPLPTSW  121 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~~~~~~~~~~~~  121 (133)
                      |..+|.+|+++++++.|+||.+..++..
T Consensus       254 l~~~P~~R~~~~~ll~~~~~~~~~~~~~  281 (292)
T cd06657         254 LVRDPAQRATAAELLKHPFLAKAGPPSC  281 (292)
T ss_pred             HhCCcccCcCHHHHhcChHHhccCCCcc
Confidence            9999999999999999999988766543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.66  E-value=8.1e-17  Score=112.74  Aligned_cols=96  Identities=30%  Similarity=0.434  Sum_probs=74.3

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh-CCCCCC--CCCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR-GELPPI--PDSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~-~~~~~~--~~~~~~~~~~~~~   91 (133)
                      ..+||+.|+|||++..  ..++.++|+||+||++|+|++|..||.+..  .....+.. ......  ....+..+.+++.
T Consensus       207 ~~~gt~~Y~aPE~~~~--~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~  284 (382)
T cd05625         207 SLVGTPNYIAPEVLLR--TGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLII  284 (382)
T ss_pred             ccccCcccCCHHHhcC--CCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHH
Confidence            4589999999999987  458999999999999999999999997654  22222222 111122  2456888999998


Q ss_pred             HHcccCCCCCCC---HHHHhhCCCCCC
Q 032788           92 KCLQVNPNDRPT---AAQLMEHPFVKR  115 (133)
Q Consensus        92 ~~l~~~p~~R~s---~~~~l~~~~~~~  115 (133)
                      +++ .+|.+|++   +++++.||||+.
T Consensus       285 ~l~-~~p~~R~~~~~~~ei~~hp~f~~  310 (382)
T cd05625         285 KLC-RGPEDRLGKNGADEIKAHPFFKT  310 (382)
T ss_pred             HHc-cCHhHcCCCCCHHHHhcCCCcCC
Confidence            876 58999987   999999999976

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.66  E-value=5.8e-16  Score=103.52  Aligned_cols=96  Identities=41%  Similarity=0.776  Sum_probs=72.7

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH--HHHHHH-hCCCCCCC----CCCCHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIA-RGELPPIP----DSVSRDARDFI   90 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~--~~~~~~-~~~~~~~~----~~~~~~~~~~~   90 (133)
                      ..|+..|++||.+......++.++|+|++|+++|++++|..||...+.  ...... .......+    ..++..+.+++
T Consensus       170 ~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  249 (272)
T cd06629         170 MQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFL  249 (272)
T ss_pred             ccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHH
Confidence            467889999999876322478899999999999999999999865432  222111 11111222    24578999999


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                      ..||..+|++||+++++++|||+
T Consensus       250 ~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         250 NACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             HHHhcCChhhCCCHHHHhhCCCC
Confidence            99999999999999999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.66  E-value=3.5e-16  Score=104.85  Aligned_cols=100  Identities=29%  Similarity=0.486  Sum_probs=76.1

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHH--HHHHHhCCCCCCCC-CCCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA--LFKIARGELPPIPD-SVSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~   93 (133)
                      ...|+..|++||.+... ..++.++|+|++|+++|++++|..||.+....  ...+.....+..+. ..+..+.+++.+|
T Consensus       160 ~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  238 (277)
T cd06917         160 TFVGTPYWMAPEVITEG-KYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFVAAC  238 (277)
T ss_pred             cccCCcceeCHHHhccC-CccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCCCCCcccCCHHHHHHHHHH
Confidence            34788899999988652 34688999999999999999999999765421  11111122222222 3678899999999


Q ss_pred             cccCCCCCCCHHHHhhCCCCCCCC
Q 032788           94 LQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      |..+|.+||++.+++.|+|++...
T Consensus       239 l~~~p~~R~~~~~il~~~~~~~~~  262 (277)
T cd06917         239 LDEEPKERLSAEELLKSKWIKAHS  262 (277)
T ss_pred             cCCCcccCcCHHHHhhChHhhccc
Confidence            999999999999999999997644

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.66  E-value=6.1e-16  Score=103.83  Aligned_cols=98  Identities=30%  Similarity=0.506  Sum_probs=78.4

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ...|+..|++||.+..  ..++.++|+||+|+++|++++|..|+....  .....+.....+......+..+.+++.+||
T Consensus       160 ~~~~~~~y~~PE~~~~--~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  237 (277)
T cd06641         160 TFVGTPFWMAPEVIKQ--SAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACL  237 (277)
T ss_pred             cccCCccccChhhhcc--CCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCCCCCcccCHHHHHHHHHHc
Confidence            3468889999999876  447889999999999999999999987544  222233333333445567889999999999


Q ss_pred             ccCCCCCCCHHHHhhCCCCCCC
Q 032788           95 QVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      ..+|.+||++.++++|+|+...
T Consensus       238 ~~~p~~Rp~~~~~l~~~~~~~~  259 (277)
T cd06641         238 NKEPSFRPTAKELLKHKFIVRF  259 (277)
T ss_pred             cCChhhCcCHHHHHhCHHHhhh
Confidence            9999999999999999999764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.66  E-value=8e-16  Score=104.21  Aligned_cols=99  Identities=28%  Similarity=0.529  Sum_probs=75.7

Q ss_pred             ccccccccccccccCC--CCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhCCCCCCC--CCCCHHHHHHHH
Q 032788           19 VSRWNSLTDQVVNSKN--GGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELPPIP--DSVSRDARDFIL   91 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~--~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~~   91 (133)
                      .++..|++||.+....  ..++.++|+||+|+++|++++|+.||....   ..+..+........+  ...+.++.+++.
T Consensus       175 ~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  254 (296)
T cd06618         175 AGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVD  254 (296)
T ss_pred             CCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHH
Confidence            5778899999987521  236789999999999999999999997643   222233323222222  236788999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      +||..+|.+||++++++.|+|+....
T Consensus       255 ~~l~~~p~~Rp~~~~il~~~~~~~~~  280 (296)
T cd06618         255 LCLTKDHRKRPKYRELLQHPFIRRYE  280 (296)
T ss_pred             HHccCChhhCCCHHHHhcChhhhccc
Confidence            99999999999999999999997643

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.66  E-value=6e-16  Score=104.23  Aligned_cols=97  Identities=28%  Similarity=0.507  Sum_probs=74.7

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH-------------HHHHHHhCCCCCCCCC-C
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-------------ALFKIARGELPPIPDS-V   82 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~-------------~~~~~~~~~~~~~~~~-~   82 (133)
                      ..+|+..|++||++..  ..++.++|+||+|+++|++++|..||.....             ....+.....+..+.. .
T Consensus       161 ~~~~~~~~~aPE~~~~--~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd06620         161 TFVGTSTYMSPERIQG--GKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDF  238 (284)
T ss_pred             ccccCcccCCHHHHcc--CCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhc
Confidence            3578999999999876  4588899999999999999999999864321             1122222222222222 6


Q ss_pred             CHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           83 SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        83 ~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      +..+.+++.+|+..||.+||++.++++|+||..
T Consensus       239 ~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~  271 (284)
T cd06620         239 PEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ  271 (284)
T ss_pred             CHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence            778999999999999999999999999998854

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.66  E-value=5.6e-16  Score=103.28  Aligned_cols=95  Identities=34%  Similarity=0.715  Sum_probs=75.1

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHHHHH-HhCCCCCCCCCCCHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WALFKI-ARGELPPIPDSVSRDARDFIL   91 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~   91 (133)
                      ..|+..|++||.+..  ..++.++|+|++|+++|++++|..||....     ...... ........+...+..+.+++.
T Consensus       168 ~~~~~~~~~PE~~~~--~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  245 (268)
T cd06630         168 LLGTIAFMAPEVLRG--EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTL  245 (268)
T ss_pred             cccccceeCHhHhcc--CCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHH
Confidence            467889999999876  347889999999999999999999986432     111111 112233455667889999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVK  114 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~  114 (133)
                      .|+..+|.+||++.++++||||+
T Consensus       246 ~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         246 RCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             HHcCCCcccCcCHHHHhcCcccC
Confidence            99999999999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.66  E-value=6.2e-16  Score=104.47  Aligned_cols=97  Identities=28%  Similarity=0.414  Sum_probs=78.6

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-H-HHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-W-ALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..+|++.|++||.+..  ..++.++|+||+|+++|++++|..||.... . ....+. ......+...+..+.+++.+||
T Consensus       157 ~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l  233 (290)
T cd05580         157 TLCGTPEYLAPEIILS--KGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKIL-EGKVRFPSFFSPDAKDLIRNLL  233 (290)
T ss_pred             CCCCCccccChhhhcC--CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh-cCCccCCccCCHHHHHHHHHHc
Confidence            3478899999999876  347889999999999999999999987654 2 222332 3334556677899999999999


Q ss_pred             ccCCCCCC-----CHHHHhhCCCCCCC
Q 032788           95 QVNPNDRP-----TAAQLMEHPFVKRP  116 (133)
Q Consensus        95 ~~~p~~R~-----s~~~~l~~~~~~~~  116 (133)
                      ..+|.+|+     +++++++||||+..
T Consensus       234 ~~~p~~R~~~~~~~~~~l~~~~~~~~~  260 (290)
T cd05580         234 QVDLTKRLGNLKNGVNDIKNHPWFAGI  260 (290)
T ss_pred             cCCHHHccCcccCCHHHHHcCcccccC
Confidence            99999998     89999999999753

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.65  E-value=1.1e-15  Score=105.31  Aligned_cols=99  Identities=27%  Similarity=0.417  Sum_probs=72.6

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh-----------------------
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR-----------------------   72 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~-----------------------   72 (133)
                      .+|+..|+|||.+... ..++.++|+||+|+++|++++|..||.+.+  .....+..                       
T Consensus       169 ~~~~~~y~aPE~~~~~-~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (336)
T cd07849         169 YVATRWYRAPEIMLNS-KGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIK  247 (336)
T ss_pred             cCcCCCccChHHhhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHh
Confidence            4788899999987642 347889999999999999999999986532  11100000                       


Q ss_pred             CC--CCC-----CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           73 GE--LPP-----IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        73 ~~--~~~-----~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      ..  ...     .....+..+.+++.+||..+|.+||++.++++|||+....
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~  299 (336)
T cd07849         248 SLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH  299 (336)
T ss_pred             hcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence            00  000     0113466788999999999999999999999999998654

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.65  E-value=5.6e-16  Score=102.92  Aligned_cols=97  Identities=35%  Similarity=0.634  Sum_probs=77.6

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHHHHHHhCCCCCCCCC-CCHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WALFKIARGELPPIPDS-VSRDARDFI   90 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~   90 (133)
                      ...++..|++||.+..  ..++.++|+|++|+++|++++|..||....     .....+........+.. .+..+.+++
T Consensus       159 ~~~~~~~y~~pE~~~~--~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  236 (264)
T cd06623         159 TFVGTVTYMSPERIQG--ESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFI  236 (264)
T ss_pred             ceeecccccCHhhhCC--CCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHH
Confidence            3467888999999887  457889999999999999999999986552     22233333333344444 788999999


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      ..|+..+|++||+++++++|+|++.
T Consensus       237 ~~~l~~~p~~R~~~~~ll~~~~~~~  261 (264)
T cd06623         237 SACLQKDPKKRPSAAELLQHPFIKK  261 (264)
T ss_pred             HHHccCChhhCCCHHHHHhCHHHHh
Confidence            9999999999999999999999964

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.65  E-value=1.4e-16  Score=109.23  Aligned_cols=99  Identities=27%  Similarity=0.492  Sum_probs=78.8

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-HHH-HHHHhCC--CCCCCCCCCHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WAL-FKIARGE--LPPIPDSVSRDARDFIL   91 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-~~~-~~~~~~~--~~~~~~~~~~~~~~~~~   91 (133)
                      .+.||++.|||||++..  .+|+.|+|+||+|+++|++++|+.||.... ..+ ..++++.  .+..+........+++.
T Consensus       172 ~tlcGSplYMAPEV~~~--~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~  249 (429)
T KOG0595|consen  172 ETLCGSPLYMAPEVIMS--QQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLI  249 (429)
T ss_pred             HHhhCCccccCHHHHHh--ccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhh
Confidence            34699999999999987  459999999999999999999999998765 232 2333332  23345556667778999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      ..+..++.+|.++.+...|+++...
T Consensus       250 ~ll~~~~~~~~~~~~~~~~~~l~~~  274 (429)
T KOG0595|consen  250 SLLQRNPKDRISFEDFFDHPFLAAN  274 (429)
T ss_pred             HHHhcCccccCchHHhhhhhhcccC
Confidence            9999999999999999999988643

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.65  E-value=8.7e-16  Score=104.26  Aligned_cols=98  Identities=30%  Similarity=0.494  Sum_probs=76.5

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC--CCCCCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL--PPIPDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~   92 (133)
                      ..+|+..|++||.+..  ..++.++|+||+|+++|++++|..||....  .....+.....  .......+..+.+++..
T Consensus       176 ~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~  253 (297)
T cd06659         176 SLVGTPYWMAPEVISR--TPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLER  253 (297)
T ss_pred             ceecCccccCHHHHcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHH
Confidence            3578899999999976  447899999999999999999999987543  22222222111  11233467789999999


Q ss_pred             HcccCCCCCCCHHHHhhCCCCCCC
Q 032788           93 CLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      ||..+|.+||+++++++|+|+.+.
T Consensus       254 ~l~~~P~~Rps~~~ll~~~~~~~~  277 (297)
T cd06659         254 MLTREPQERATAQELLDHPFLLQT  277 (297)
T ss_pred             HhcCCcccCcCHHHHhhChhhccC
Confidence            999999999999999999999764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.65  E-value=5.1e-16  Score=104.60  Aligned_cols=98  Identities=36%  Similarity=0.667  Sum_probs=76.3

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH--HHHHHHhCCCCCC--CCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPI--PDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~   92 (133)
                      ...|+..|++||.+..  ..++.++|+|++|+++|++++|..||...+.  ....+........  +..++..+.+++..
T Consensus       175 ~~~~~~~y~~PE~~~~--~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  252 (286)
T cd06614         175 SVVGTPYWMAPEVIKR--KDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNK  252 (286)
T ss_pred             cccCCcccCCHhHhcC--CCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHH
Confidence            3467888999999876  4478999999999999999999999876542  2222222222222  22367889999999


Q ss_pred             HcccCCCCCCCHHHHhhCCCCCCC
Q 032788           93 CLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      |+..+|.+||++.++++|+|+.+.
T Consensus       253 ~l~~~p~~Rpt~~~il~~~~~~~~  276 (286)
T cd06614         253 CLVKDPEKRPSAEELLQHPFLKKA  276 (286)
T ss_pred             HhccChhhCcCHHHHhhChHhhcc
Confidence            999999999999999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.65  E-value=8.2e-16  Score=102.91  Aligned_cols=94  Identities=30%  Similarity=0.522  Sum_probs=77.1

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ...|+..|++||....  ..++.++|+|++|++++++++|..||....  ....... ......+...+..+.+++.+||
T Consensus       181 ~~~~~~~~~~Pe~~~~--~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l  257 (280)
T cd05581         181 SFVGTAEYVSPELLNE--KPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKIL-KLEYSFPPNFPPDAKDLIEKLL  257 (280)
T ss_pred             cccCCccccCHHHhCC--CCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH-hcCCCCCCccCHHHHHHHHHHh
Confidence            4567889999999876  347889999999999999999999997654  2222222 3334556677899999999999


Q ss_pred             ccCCCCCCCH----HHHhhCCCC
Q 032788           95 QVNPNDRPTA----AQLMEHPFV  113 (133)
Q Consensus        95 ~~~p~~R~s~----~~~l~~~~~  113 (133)
                      ..+|.+||++    +++++|+||
T Consensus       258 ~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         258 VLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             cCCHhhCCCcccCHHHHhcCCCC
Confidence            9999999999    999999997

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.65  E-value=1.4e-16  Score=106.11  Aligned_cols=98  Identities=29%  Similarity=0.491  Sum_probs=76.1

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC------------------
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP------------------   77 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~------------------   77 (133)
                      .+.|.+|.|||.+.+. ..|+..+|||++||++.||++|.+-|-+..  +++..++.....-                  
T Consensus       161 YVATRWYRaPELLvGD-tqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~  239 (396)
T KOG0593|consen  161 YVATRWYRAPELLVGD-TQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVR  239 (396)
T ss_pred             hhhhhhccChhhhccc-CcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeee
Confidence            4778899999999973 579999999999999999999998887654  4454443321110                  


Q ss_pred             --CC----------CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           78 --IP----------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        78 --~~----------~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                        -+          ..++.-+.+++..|+..||++|++++|++.|+||+..
T Consensus       240 lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~~  290 (396)
T KOG0593|consen  240 LPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDGF  290 (396)
T ss_pred             cCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHHH
Confidence              00          1234467899999999999999999999999999653

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.65  E-value=9.6e-16  Score=102.79  Aligned_cols=89  Identities=20%  Similarity=0.439  Sum_probs=72.5

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .+++.|+|||.+..  ..++.++|+||+|+++|++++ |..||....  .....+..+.....+...+..+.+++.+||.
T Consensus       185 ~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  262 (280)
T cd05049         185 MLPIRWMPPESIMY--RKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRLLQRPRTCPSEVYDIMLGCWK  262 (280)
T ss_pred             cccceecChhhhcc--CCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcC
Confidence            45678999999987  458899999999999999998 999986543  3344444455445566788999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032788           96 VNPNDRPTAAQLME  109 (133)
Q Consensus        96 ~~p~~R~s~~~~l~  109 (133)
                      .+|.+||+++++++
T Consensus       263 ~~p~~Rp~~~eil~  276 (280)
T cd05049         263 RDPQQRINIKDIHE  276 (280)
T ss_pred             CCcccCCCHHHHHH
Confidence            99999999999975

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.65  E-value=5.6e-17  Score=113.30  Aligned_cols=96  Identities=30%  Similarity=0.433  Sum_probs=74.5

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC-CC--CCCCCCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG-EL--PPIPDSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~-~~--~~~~~~~~~~~~~~~~   91 (133)
                      ..+||+.|+|||++..  ..++.++|+||+||++|+|++|..||.+..  .....+... ..  .+....++..+.+++.
T Consensus       203 ~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  280 (376)
T cd05598         203 SLVGTPNYIAPEVLLR--TGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLIL  280 (376)
T ss_pred             ccCCCccccCHHHHcC--CCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHH
Confidence            4589999999999987  458999999999999999999999997654  222222211 11  1122357788999999


Q ss_pred             HHcccCCCCCC---CHHHHhhCCCCCC
Q 032788           92 KCLQVNPNDRP---TAAQLMEHPFVKR  115 (133)
Q Consensus        92 ~~l~~~p~~R~---s~~~~l~~~~~~~  115 (133)
                      +|+ .+|.+|+   ++.++++|+||..
T Consensus       281 ~l~-~~p~~R~~~~t~~ell~h~~~~~  306 (376)
T cd05598         281 RLC-CGAEDRLGKNGADEIKAHPFFKG  306 (376)
T ss_pred             HHh-cCHhhcCCCCCHHHHhCCCCcCC
Confidence            876 5999999   9999999999975

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.65  E-value=8.5e-16  Score=102.44  Aligned_cols=94  Identities=41%  Similarity=0.691  Sum_probs=73.5

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHH-hCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIA-RGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..|+..|++||.+..  ..++.++|+||+|+++|++++|+.||....  ....... ....+..+......+.+++.+|+
T Consensus       169 ~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  246 (265)
T cd06652         169 VTGTPYWMSPEVISG--EGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIF  246 (265)
T ss_pred             CCCCccccChhhhcC--CCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHh
Confidence            468889999999876  447899999999999999999999997643  2222222 22233345566778899999998


Q ss_pred             ccCCCCCCCHHHHhhCCCCC
Q 032788           95 QVNPNDRPTAAQLMEHPFVK  114 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~~~~~  114 (133)
                      . +|.+||+++++++|+|+.
T Consensus       247 ~-~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         247 V-EAKLRPSADELLRHTFVH  265 (265)
T ss_pred             c-ChhhCCCHHHHhcCcccC
Confidence            4 899999999999999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.65  E-value=2e-16  Score=110.46  Aligned_cols=100  Identities=29%  Similarity=0.457  Sum_probs=77.2

Q ss_pred             hccccccccccccccccCC--CCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCC-CCCCCC--CCCHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKN--GGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGE-LPPIPD--SVSRDARD   88 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~--~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~-~~~~~~--~~~~~~~~   88 (133)
                      ...+||+.|+|||++....  ..++.++|+||+|+++|++++|..||.+..  .....+.... ....+.  ..+..+.+
T Consensus       201 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~  280 (370)
T cd05596         201 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKD  280 (370)
T ss_pred             CCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHH
Confidence            3468999999999986521  237889999999999999999999998754  2233333221 122232  46889999


Q ss_pred             HHHHHcccCCCC--CCCHHHHhhCCCCCC
Q 032788           89 FILKCLQVNPND--RPTAAQLMEHPFVKR  115 (133)
Q Consensus        89 ~~~~~l~~~p~~--R~s~~~~l~~~~~~~  115 (133)
                      ++..|+..+|.+  |++++++++|+||..
T Consensus       281 li~~~L~~~p~r~~R~s~~ell~h~~~~~  309 (370)
T cd05596         281 LICAFLTDREVRLGRNGVDEIKSHPFFKN  309 (370)
T ss_pred             HHHHHccChhhccCCCCHHHHhcCcccCC
Confidence            999999988887  999999999999976

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.65  E-value=8.5e-16  Score=103.26  Aligned_cols=95  Identities=28%  Similarity=0.525  Sum_probs=70.8

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCC--------------------C
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGE--------------------L   75 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~--------------------~   75 (133)
                      ..++..|++||.+... ..++.++|+||+|+++|++++|..||.+..  .....+....                    .
T Consensus       160 ~~~~~~~~aPE~~~~~-~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (286)
T cd07847         160 YVATRWYRAPELLVGD-TQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLS  238 (286)
T ss_pred             cccccccCCHHHHhCC-CCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccccccc
Confidence            4577889999998652 347889999999999999999999997543  2221111100                    0


Q ss_pred             CCC----------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           76 PPI----------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        76 ~~~----------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                      .+.          ....+..+.+++.+||..+|.+||++.+++.|+||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         239 IPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             CCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence            000          12346778999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.65  E-value=3.9e-16  Score=111.89  Aligned_cols=108  Identities=26%  Similarity=0.384  Sum_probs=78.3

Q ss_pred             hhchhhhhhhh----ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC--
Q 032788            6 VEGLGNALRRK----WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP--   77 (133)
Q Consensus         6 ~~~~~~~~~~~----~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~--   77 (133)
                      +.+||.+...+    +.+-+..|+|||++.+  .+|+.+.|+|||||++.||++|.+-|-+.+  +++..+.+-...+  
T Consensus       332 VIDFGSSc~~~q~vytYiQSRfYRAPEVILG--lpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~  409 (586)
T KOG0667|consen  332 VIDFGSSCFESQRVYTYIQSRFYRAPEVILG--LPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPP  409 (586)
T ss_pred             EEecccccccCCcceeeeeccccccchhhcc--CCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCH
Confidence            34555544322    3467789999999999  669999999999999999999987776643  2333332200000  


Q ss_pred             -------------------------------------------------CC-----------CCCCHHHHHHHHHHcccC
Q 032788           78 -------------------------------------------------IP-----------DSVSRDARDFILKCLQVN   97 (133)
Q Consensus        78 -------------------------------------------------~~-----------~~~~~~~~~~~~~~l~~~   97 (133)
                                                                       .|           ......+.+|+.+|+.+|
T Consensus       410 ~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~d  489 (586)
T KOG0667|consen  410 KMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWD  489 (586)
T ss_pred             HHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccC
Confidence                                                             01           011246789999999999


Q ss_pred             CCCCCCHHHHhhCCCCCC
Q 032788           98 PNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        98 p~~R~s~~~~l~~~~~~~  115 (133)
                      |..|++..++++|||+..
T Consensus       490 P~~R~tp~qal~Hpfl~~  507 (586)
T KOG0667|consen  490 PAERITPAQALNHPFLTG  507 (586)
T ss_pred             chhcCCHHHHhcCccccc
Confidence            999999999999999985

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.65  E-value=3.7e-16  Score=106.56  Aligned_cols=100  Identities=31%  Similarity=0.508  Sum_probs=72.2

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHH--HHHHHhCCCCC-----------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA--LFKIARGELPP-----------------   77 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~--~~~~~~~~~~~-----------------   77 (133)
                      ...++..|++||.+......++.++|+||+|+++|++++|..||......  ......+....                 
T Consensus       167 ~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (314)
T cd08216         167 SSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQS  246 (314)
T ss_pred             cccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcc
Confidence            34677789999998753234788999999999999999999999764311  11111111000                 


Q ss_pred             ----------------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           78 ----------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        78 ----------------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                                      .....+.++.+++..||..+|.+||+++++++||||...
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~  301 (314)
T cd08216         247 RSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQC  301 (314)
T ss_pred             cccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhh
Confidence                            001123567889999999999999999999999999764

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.65  E-value=1e-15  Score=102.88  Aligned_cols=95  Identities=27%  Similarity=0.475  Sum_probs=70.2

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH--HHHHHHhCC---------------------
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGE---------------------   74 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~--~~~~~~~~~---------------------   74 (133)
                      ..++..|++||++... ..++.++|+||+|+++|++++|..||.....  ....+....                     
T Consensus       159 ~~~~~~~~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (283)
T cd07835         159 EVVTLWYRAPEILLGS-RQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTF  237 (283)
T ss_pred             cccccCCCCCceeecC-cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhc
Confidence            3567889999988753 2368899999999999999999999865431  111111100                     


Q ss_pred             ----C---CCCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           75 ----L---PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        75 ----~---~~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                          .   .......+..+.+++.+|+..+|.+||+++++++|+||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         238 PKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             ccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence                0   00123455788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.65  E-value=9e-16  Score=100.93  Aligned_cols=94  Identities=43%  Similarity=0.673  Sum_probs=73.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCC--CCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDS--VSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   92 (133)
                      ...|+..|++||.+...  .++.++|+|++|+++|++++|..||....  ..............+..  .+..+.+++.+
T Consensus       156 ~~~~~~~~~~PE~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  233 (253)
T cd05122         156 TMVGTPYWMAPEVINGK--PYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKK  233 (253)
T ss_pred             ceecCCcccCHHHHcCC--CCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHH
Confidence            45788899999999873  37889999999999999999999987652  22232322333333333  37889999999


Q ss_pred             HcccCCCCCCCHHHHhhCCC
Q 032788           93 CLQVNPNDRPTAAQLMEHPF  112 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~  112 (133)
                      ||..+|.+||++.++++|||
T Consensus       234 ~l~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         234 CLQKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             HccCChhhCCCHHHHhcCCC
Confidence            99999999999999999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.65  E-value=1.1e-15  Score=103.27  Aligned_cols=95  Identities=26%  Similarity=0.418  Sum_probs=70.8

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC-------------------CC
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL-------------------PP   77 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~-------------------~~   77 (133)
                      .+++.|+|||.+... ..++.++|+|++|+++|++++|..||.+..  .....+.....                   +.
T Consensus       172 ~~~~~~~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (295)
T cd07837         172 IVTLWYRAPEVLLGS-THYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQ  250 (295)
T ss_pred             ccccCCCChHHhhCC-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCc
Confidence            567789999988653 347889999999999999999999986543  11111111000                   00


Q ss_pred             --------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCC
Q 032788           78 --------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK  114 (133)
Q Consensus        78 --------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~  114 (133)
                              .....+..+.+++.+||..+|.+|+++++++.||||+
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         251 WKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             ccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence                    0123577899999999999999999999999999985

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.64  E-value=9.7e-16  Score=104.33  Aligned_cols=101  Identities=33%  Similarity=0.579  Sum_probs=76.7

Q ss_pred             cccccccccccccccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCC-CCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNS-KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI-PDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~-~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   92 (133)
                      ...|+..|++||++.. ....++.++|+|++|+++|++++|..||...+  .....+.....+.. ....+..+.+++.+
T Consensus       170 ~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  249 (307)
T cd06607         170 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVDS  249 (307)
T ss_pred             CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHHHHHHHH
Confidence            3467889999998852 12347889999999999999999999987654  22223322222222 23457789999999


Q ss_pred             HcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           93 CLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      ||..+|.+||++++++.|+|+....
T Consensus       250 ~l~~~p~~Rp~~~~il~~~~~~~~~  274 (307)
T cd06607         250 CLQKIPQDRPSSEELLKHRFVLRER  274 (307)
T ss_pred             HhcCChhhCcCHHHHhcChhhcccC
Confidence            9999999999999999999997644

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.64  E-value=1.6e-15  Score=103.71  Aligned_cols=101  Identities=32%  Similarity=0.568  Sum_probs=76.5

Q ss_pred             cccccccccccccccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC-CCCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNS-KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP-IPDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~-~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   92 (133)
                      ...|+..|++||.+.. ....++.++|+||+|+++|++++|..||...+  ...........+. .....+..+.+++.+
T Consensus       176 ~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  255 (313)
T cd06633         176 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDY  255 (313)
T ss_pred             CccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHH
Confidence            4578889999999852 11347889999999999999999999987654  2223332222222 223456789999999


Q ss_pred             HcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           93 CLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      ||..+|.+||++.+++.|+|+....
T Consensus       256 ~l~~~P~~Rp~~~~~l~~~~~~~~~  280 (313)
T cd06633         256 CLQKIPQERPASAELLRHDFVRRDR  280 (313)
T ss_pred             HccCChhhCcCHHHHhcCcccCCCc
Confidence            9999999999999999999998644

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.64  E-value=2.3e-16  Score=106.71  Aligned_cols=114  Identities=24%  Similarity=0.319  Sum_probs=85.2

Q ss_pred             hhhchhhhhhh------hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC-
Q 032788            5 TVEGLGNALRR------KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL-   75 (133)
Q Consensus         5 ~~~~~~~~~~~------~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~-   75 (133)
                      .+.+||.++..      .+...|..|+|||.+.+. ..|+.+.||||+||++.||+.|.+.|.+..  .++..+.+-.+ 
T Consensus       166 KicDFGSAK~L~~~epniSYicSRyYRaPELifga-~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~  244 (364)
T KOG0658|consen  166 KICDFGSAKVLVKGEPNISYICSRYYRAPELIFGA-TEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGT  244 (364)
T ss_pred             EeccCCcceeeccCCCceeEEEeccccCHHHHcCc-cccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCC
Confidence            34577776643      223667789999999874 579999999999999999999999998754  33332222111 


Q ss_pred             ----------CC-----------------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCCC
Q 032788           76 ----------PP-----------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPT  119 (133)
Q Consensus        76 ----------~~-----------------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~~  119 (133)
                                +.                 .....+.+..+++.+++.++|.+|.++.|+++|+||+....+
T Consensus       245 Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~  315 (364)
T KOG0658|consen  245 PTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP  315 (364)
T ss_pred             CCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence                      00                 123457899999999999999999999999999999864443

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.64  E-value=7.4e-16  Score=103.45  Aligned_cols=97  Identities=25%  Similarity=0.391  Sum_probs=76.7

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHHHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WALFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ..++..|++||++..  ..++.++|+|++|+++|++++|..||....     ..+...........+...+..+.+++.+
T Consensus       154 ~~~~~~y~~PE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  231 (277)
T cd05577         154 RAGTPGYMAPEVLQG--EVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEA  231 (277)
T ss_pred             ccCCCCcCCHHHhcC--CCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHH
Confidence            467788999999887  348889999999999999999999996543     1222222222334456678999999999


Q ss_pred             HcccCCCCCC-----CHHHHhhCCCCCCC
Q 032788           93 CLQVNPNDRP-----TAAQLMEHPFVKRP  116 (133)
Q Consensus        93 ~l~~~p~~R~-----s~~~~l~~~~~~~~  116 (133)
                      ||..+|.+|+     ++.+++.||||...
T Consensus       232 ~l~~~p~~R~~~~~~~~~~ll~h~~~~~~  260 (277)
T cd05577         232 LLQKDPEKRLGCRGGSADEVREHPLFKDL  260 (277)
T ss_pred             HccCChhHccCCCcccHHHHHhChhhhcC
Confidence            9999999999     88889999999754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.64  E-value=1.5e-15  Score=100.39  Aligned_cols=94  Identities=33%  Similarity=0.607  Sum_probs=77.2

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ..|+..|++||.+..  ..++.++|+|++|+++|++++|..||....  .....+..+..+..+...+..+.+++.+|+.
T Consensus       161 ~~~~~~~~~Pe~~~~--~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  238 (256)
T cd08530         161 QIGTPHYMAPEVWKG--RPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQ  238 (256)
T ss_pred             ccCCccccCHHHHCC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCchhhCHHHHHHHHHHcC
Confidence            467889999999977  447889999999999999999999997654  2223334444455556778899999999999


Q ss_pred             cCCCCCCCHHHHhhCCCC
Q 032788           96 VNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~~~~  113 (133)
                      .+|.+||+++++++||++
T Consensus       239 ~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         239 VKPKLRPNCDKILASPAV  256 (256)
T ss_pred             CCcccCCCHHHHhcCCCC
Confidence            999999999999999974

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.64  E-value=1.1e-15  Score=102.91  Aligned_cols=97  Identities=32%  Similarity=0.534  Sum_probs=72.8

Q ss_pred             ccccccccccccccccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCC--CCCCCCCHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSK---NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELP--PIPDSVSRDARDF   89 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~---~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~   89 (133)
                      ...|+..|+|||.+...   ...++.++|+||+|+++|++++|..|+....  ............  ..+...+..+.++
T Consensus       183 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  262 (286)
T cd06638         183 TSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDF  262 (286)
T ss_pred             cccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHH
Confidence            34788999999988531   1347889999999999999999999987654  222222111111  1233456789999


Q ss_pred             HHHHcccCCCCCCCHHHHhhCCCC
Q 032788           90 ILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        90 ~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                      +.+||..+|++||++.++++|+|+
T Consensus       263 i~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         263 IRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             HHHHccCCcccCCCHHHHhhcccC
Confidence            999999999999999999999986

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.64  E-value=1.6e-16  Score=111.10  Aligned_cols=96  Identities=26%  Similarity=0.411  Sum_probs=73.5

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC-CCCCCC--CCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG-ELPPIP--DSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~-~~~~~~--~~~~~~~~~~~~   91 (133)
                      ..+||+.|+|||++..  ..++.++|+||+||++|++++|..||.+..  .....+... .....+  ...+..+.+++.
T Consensus       207 ~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~  284 (377)
T cd05629         207 STVGTPDYIAPEIFLQ--QGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIR  284 (377)
T ss_pred             ccCCCccccCHHHHcc--CCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHH
Confidence            3589999999999987  458999999999999999999999997644  222323221 112223  246789999999


Q ss_pred             HHcccCCCCC---CCHHHHhhCCCCCC
Q 032788           92 KCLQVNPNDR---PTAAQLMEHPFVKR  115 (133)
Q Consensus        92 ~~l~~~p~~R---~s~~~~l~~~~~~~  115 (133)
                      +|+. +|.+|   +++.+++.||||..
T Consensus       285 ~lL~-~~~~r~~r~~~~~~l~hp~~~~  310 (377)
T cd05629         285 RLIT-NAENRLGRGGAHEIKSHPFFRG  310 (377)
T ss_pred             HHhc-CHhhcCCCCCHHHHhcCCCcCC
Confidence            9997 66655   69999999999974

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.64  E-value=1.9e-15  Score=102.03  Aligned_cols=99  Identities=26%  Similarity=0.455  Sum_probs=74.3

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-------HHHHHHHhCCCCCCC------CCCC
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-------WALFKIARGELPPIP------DSVS   83 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-------~~~~~~~~~~~~~~~------~~~~   83 (133)
                      ...++..|++||.+..  ..++.++|+|++|+++|++++|..||....       .....+.....+...      ...+
T Consensus       162 ~~~~~~~y~~pE~~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (287)
T cd06621         162 TFTGTSFYMAPERIQG--KPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWS  239 (287)
T ss_pred             cccCCccccCHHHhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchH
Confidence            3467888999999876  458899999999999999999999987541       112222211111111      2235


Q ss_pred             HHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           84 RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        84 ~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      ..+.+++..||..+|.+||++.|++.|+|+....
T Consensus       240 ~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~  273 (287)
T cd06621         240 EEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQM  273 (287)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHHhCccccccc
Confidence            6889999999999999999999999999996543

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.64  E-value=1.3e-15  Score=101.16  Aligned_cols=89  Identities=20%  Similarity=0.308  Sum_probs=72.4

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|+|||.+..  ..++.++|+||+|+++|++++ |..||....  .....+.++.....+...+..+.+++..||.
T Consensus       159 ~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~  236 (257)
T cd05116         159 KWPVKWYAPECMNY--YKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQRCPPEMYDLMKLCWT  236 (257)
T ss_pred             CCCccccCHhHhcc--CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHhc
Confidence            34568999999876  447889999999999999997 899987643  3344455555556677789999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032788           96 VNPNDRPTAAQLME  109 (133)
Q Consensus        96 ~~p~~R~s~~~~l~  109 (133)
                      .||.+||++.++..
T Consensus       237 ~~p~~Rp~~~~i~~  250 (257)
T cd05116         237 YGVDERPGFAVVEL  250 (257)
T ss_pred             cCchhCcCHHHHHH
Confidence            99999999998865

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.64  E-value=1.2e-15  Score=105.13  Aligned_cols=89  Identities=24%  Similarity=0.449  Sum_probs=71.2

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH---HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE---WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      .++..|+|||++..  ..++.++|+||+|+++|++++ |..||.+..   .....+..+.....+...+..+.+++.+||
T Consensus       237 ~~~~~y~aPE~~~~--~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  314 (338)
T cd05102         237 RLPLKWMAPESIFD--KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACW  314 (338)
T ss_pred             CCCccccCcHHhhc--CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHc
Confidence            45678999999977  458999999999999999986 889987643   223333444444556677889999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032788           95 QVNPNDRPTAAQLME  109 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~  109 (133)
                      ..||.+||++.++++
T Consensus       315 ~~dp~~RPs~~el~~  329 (338)
T cd05102         315 QGDPKERPTFSALVE  329 (338)
T ss_pred             cCChhhCcCHHHHHH
Confidence            999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.64  E-value=8.7e-16  Score=103.14  Aligned_cols=102  Identities=28%  Similarity=0.561  Sum_probs=78.4

Q ss_pred             cccccccccccccccC--CCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhCCCCCCC-CCCCHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSK--NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELPPIP-DSVSRDARDFIL   91 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~--~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~   91 (133)
                      ..|+..|++||.+...  ...++.++|+|++|+++|++++|..||....   ..+...........+ ...+..+.+++.
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  242 (283)
T cd06617         163 DAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVN  242 (283)
T ss_pred             ccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHH
Confidence            4678889999988641  1236789999999999999999999986532   233333333333333 346789999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKRPLPT  119 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~~~~~  119 (133)
                      +||..+|.+||+++++++|+||.+....
T Consensus       243 ~~l~~~p~~Rp~~~~il~~~~~~~~~~~  270 (283)
T cd06617         243 KCLKKNYKERPNYPELLQHPFFELHLSK  270 (283)
T ss_pred             HHccCChhhCcCHHHHhcCchhhhcccc
Confidence            9999999999999999999999876543

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.64  E-value=1.2e-15  Score=101.29  Aligned_cols=96  Identities=35%  Similarity=0.635  Sum_probs=72.0

Q ss_pred             ccccccccccccccccC-CCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCC-CCC---CCCCCCHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGE-LPP---IPDSVSRDARDF   89 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~-~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~-~~~---~~~~~~~~~~~~   89 (133)
                      ...|+..|++||.+... ...++.++|+||+|+++|++++|..||....  .......... ...   .....+.++.++
T Consensus       160 ~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  239 (262)
T cd06613         160 SFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDF  239 (262)
T ss_pred             cccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHH
Confidence            35788899999998752 1157889999999999999999999987654  2222222221 111   122345678999


Q ss_pred             HHHHcccCCCCCCCHHHHhhCCC
Q 032788           90 ILKCLQVNPNDRPTAAQLMEHPF  112 (133)
Q Consensus        90 ~~~~l~~~p~~R~s~~~~l~~~~  112 (133)
                      +.+||..+|.+||++++++.|+|
T Consensus       240 i~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         240 IKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             HHHHcCCChhhCCCHHHHhcCCC
Confidence            99999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.63  E-value=1.4e-15  Score=100.35  Aligned_cols=95  Identities=43%  Similarity=0.790  Sum_probs=76.7

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHh-CCCCCCCCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIAR-GELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ...++..|++||.+...  ..+.++|+|++|+++|++++|..||....   .....+.. ......+...+..+.+++.+
T Consensus       162 ~~~~~~~y~~pE~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~  239 (260)
T cd06606         162 SVRGTPYWMAPEVIRGE--EYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRK  239 (260)
T ss_pred             CCCCCccccCHhhhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHH
Confidence            35788899999999873  37899999999999999999999987654   22222221 23344566778999999999


Q ss_pred             HcccCCCCCCCHHHHhhCCCC
Q 032788           93 CLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~~  113 (133)
                      |+..+|++||++.+++.||||
T Consensus       240 ~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         240 CLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             hCcCChhhCCCHHHHhhCCCC
Confidence            999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.63  E-value=7.9e-16  Score=102.27  Aligned_cols=97  Identities=24%  Similarity=0.392  Sum_probs=75.1

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC---CCCCCCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL---PPIPDSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~   91 (133)
                      ...|+..|++||.+.+.  .++.++|+|++|+++|++++|..||....  .....+.....   ......++..+.+++.
T Consensus       152 ~~~~~~~y~~pe~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  229 (260)
T cd05611         152 KFVGTPDYLAPETILGV--GDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLIN  229 (260)
T ss_pred             cCCCCcCccChhhhcCC--CCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHH
Confidence            45788899999998873  37899999999999999999999997654  22222222211   1223357889999999


Q ss_pred             HHcccCCCCCC---CHHHHhhCCCCCC
Q 032788           92 KCLQVNPNDRP---TAAQLMEHPFVKR  115 (133)
Q Consensus        92 ~~l~~~p~~R~---s~~~~l~~~~~~~  115 (133)
                      +||..+|++|+   +++|++.||||.+
T Consensus       230 ~~l~~~p~~R~~~~~~~~~l~~~~~~~  256 (260)
T cd05611         230 RLLCMDPAKRLGANGYQEIKSHPFFKS  256 (260)
T ss_pred             HHccCCHHHccCCCcHHHHHcChHhhc
Confidence            99999999999   5579999999965

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.63  E-value=2.1e-15  Score=104.29  Aligned_cols=101  Identities=26%  Similarity=0.312  Sum_probs=74.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCC------------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELP------------------   76 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~------------------   76 (133)
                      ...++..|++||.+... ..++.++|+||+|+++|++++|..||.+..  ..+..+......                  
T Consensus       174 ~~~~~~~y~aPE~~~~~-~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  252 (343)
T cd07851         174 GYVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYI  252 (343)
T ss_pred             CCcccccccCHHHHhCC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHH
Confidence            34678889999998652 246889999999999999999999986543  122221111100                  


Q ss_pred             ------------CCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           77 ------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        77 ------------~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                                  ......+..+.+++.+|+..+|.+||+++++++||||.+...
T Consensus       253 ~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~  306 (343)
T cd07851         253 QSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHD  306 (343)
T ss_pred             HhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCC
Confidence                        001234778999999999999999999999999999987544

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.63  E-value=1.7e-15  Score=99.97  Aligned_cols=94  Identities=31%  Similarity=0.498  Sum_probs=77.1

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ...|+..|++||....  ...+.++|+|++|+++|++++|..||....  .....+.. .....+...+..+.+++.+||
T Consensus       152 ~~~~~~~~~~Pe~~~~--~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~i~~~l  228 (250)
T cd05123         152 TFCGTPEYLAPEVLLG--KGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK-DPLRFPEFLSPEARDLISGLL  228 (250)
T ss_pred             CCcCCccccChHHhCC--CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc-CCCCCCCCCCHHHHHHHHHHh
Confidence            4577889999999987  347889999999999999999999997654  22233322 334566777899999999999


Q ss_pred             ccCCCCCCCH---HHHhhCCCC
Q 032788           95 QVNPNDRPTA---AQLMEHPFV  113 (133)
Q Consensus        95 ~~~p~~R~s~---~~~l~~~~~  113 (133)
                      ..||++|+++   ++++.|+||
T Consensus       229 ~~~p~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         229 QKDPTKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             cCCHhhCCCcccHHHHHhCCCC
Confidence            9999999999   999999997

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.63  E-value=1.3e-15  Score=103.44  Aligned_cols=95  Identities=29%  Similarity=0.455  Sum_probs=68.4

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH--HHHHHHh--CC-CC---------------C
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIAR--GE-LP---------------P   77 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~--~~~~~~~--~~-~~---------------~   77 (133)
                      ..++..|+|||.+... ..++.++|+||+|+++|++++|..+|.+...  ....+..  +. ..               .
T Consensus       183 ~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (310)
T cd07865         183 RVVTLWYRPPELLLGE-RDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKME  261 (310)
T ss_pred             cccCccccCcHHhcCC-cccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhcc
Confidence            4577889999988653 3367899999999999999999988865431  1111111  00 00               0


Q ss_pred             C-------------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           78 I-------------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        78 ~-------------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                      .             +......+.+++.+||..||.+||+++++++|+||
T Consensus       262 ~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         262 LPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             CCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence            0             11124567899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.63  E-value=1.4e-15  Score=105.19  Aligned_cols=99  Identities=30%  Similarity=0.389  Sum_probs=73.4

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCC---------------------
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGE---------------------   74 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~---------------------   74 (133)
                      ..|+..|+|||.+... ..++.++|+||+|+++|++++|+.||.+.+  ..+..+....                     
T Consensus       174 ~~~~~~y~aPE~~~~~-~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (342)
T cd07879         174 YVVTRWYRAPEVILNW-MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIK  252 (342)
T ss_pred             ceeeecccChhhhcCc-cccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHh
Confidence            4678889999998652 347889999999999999999999997643  1111111100                     


Q ss_pred             -CCCC--------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           75 -LPPI--------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        75 -~~~~--------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                       .+..        ....+..+.+++.+||..||.+|+++++++.|+||....
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~  304 (342)
T cd07879         253 SLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR  304 (342)
T ss_pred             hcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence             0000        113566788999999999999999999999999998754

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.63  E-value=7.7e-17  Score=110.75  Aligned_cols=98  Identities=26%  Similarity=0.379  Sum_probs=74.9

Q ss_pred             cccccccccccccccC----CCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCC-CCCCC--CCCCHHHHH
Q 032788           18 HVSRWNSLTDQVVNSK----NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGE-LPPIP--DSVSRDARD   88 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~----~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~-~~~~~--~~~~~~~~~   88 (133)
                      ..||+.|+|||++...    ...++.++|+||+|+++|++++|..||....  .....+.... ....+  ...+..+.+
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  242 (330)
T cd05601         163 PVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLD  242 (330)
T ss_pred             ccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHH
Confidence            4789999999998631    1347889999999999999999999997654  2223332221 11222  346789999


Q ss_pred             HHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           89 FILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        89 ~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      ++..|+. +|.+|+++++++.||||...
T Consensus       243 li~~ll~-~p~~R~t~~~l~~h~~~~~~  269 (330)
T cd05601         243 LIQSLLC-GQKERLGYEGLCCHPFFSKI  269 (330)
T ss_pred             HHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence            9999997 99999999999999999863

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.63  E-value=2e-15  Score=102.57  Aligned_cols=95  Identities=26%  Similarity=0.388  Sum_probs=69.4

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH--HHHHHHhCCCC-------------------
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELP-------------------   76 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~--~~~~~~~~~~~-------------------   76 (133)
                      ..|++.|+|||.+.+. ..++.++|+||+|+++|++++|+.||.+...  ....+......                   
T Consensus       186 ~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (311)
T cd07866         186 LVVTRWYRPPELLLGE-RRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVH  264 (311)
T ss_pred             ceeccCcCChHHhhCC-CccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccc
Confidence            4667889999988652 3478899999999999999999999875431  11111110000                   


Q ss_pred             ---CCC-------CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           77 ---PIP-------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        77 ---~~~-------~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                         ..+       ......+.+++.+|+..+|.+|+++.+++.|+||
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         265 SFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             cCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence               000       1233578899999999999999999999999997

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.63  E-value=1.4e-15  Score=103.55  Aligned_cols=96  Identities=26%  Similarity=0.361  Sum_probs=70.1

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHH-----------HHHHHh-------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA-----------LFKIAR-------------   72 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~-----------~~~~~~-------------   72 (133)
                      ..+++..|+|||.+.+. ..++.++|+||+|+++|++++|..||.+....           +..+..             
T Consensus       174 ~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  252 (316)
T cd07842         174 PVVVTIWYRAPELLLGA-RHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDI  252 (316)
T ss_pred             CccccccccCHHHHhCC-CCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHH
Confidence            34778889999988653 34788999999999999999999998643210           000000             


Q ss_pred             ------------CCCCCCC-----------CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           73 ------------GELPPIP-----------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        73 ------------~~~~~~~-----------~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                                  ......+           ......+.+++.+|+..||.+||++++++.||||
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         253 KKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             hhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence                        0000011           1345678899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.63  E-value=2e-15  Score=101.57  Aligned_cols=96  Identities=29%  Similarity=0.560  Sum_probs=71.7

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCC---C----------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGE---L----------------   75 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~---~----------------   75 (133)
                      ...++..|++||++... ..++.++|+||+|+++|++++|..||.+..  ..+.......   .                
T Consensus       160 ~~~~~~~~~~PE~~~~~-~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (288)
T cd07833         160 DYVATRWYRAPELLVGD-TNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGV  238 (288)
T ss_pred             CcccccCCcCCchhcCC-CCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccc
Confidence            35678889999999863 257899999999999999999998886542  1111111000   0                


Q ss_pred             --C----------CCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           76 --P----------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        76 --~----------~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                        +          ..+..++..+.+++.+||..+|++||+++++++|+||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         239 AFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             ccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence              0          0122347789999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.63  E-value=9.7e-16  Score=105.94  Aligned_cols=97  Identities=25%  Similarity=0.354  Sum_probs=79.1

Q ss_pred             hhhccccccccccccccccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCChHHH--HHHHHhCCCCCCCCCCCHHHHHHH
Q 032788           14 RRKWHVSRWNSLTDQVVNSKNGGY-GLPADIWSVGCTVLEMLTRCRPYFGVEWA--LFKIARGELPPIPDSVSRDARDFI   90 (133)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~-~~~~diws~g~~~~~l~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~   90 (133)
                      -.+++||++.|.+||++++  ..| +..+|.||+|+++|.+..|..||.+.+..  ...+..+.+  .....+.....++
T Consensus       208 fLqTFCGSPLYASPEIvNG--~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaY--rEP~~PSdA~gLI  283 (668)
T KOG0611|consen  208 FLQTFCGSPLYASPEIVNG--TPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAY--REPETPSDASGLI  283 (668)
T ss_pred             HHHHhcCCcccCCccccCC--CCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccc--cCCCCCchHHHHH
Confidence            3567899999999999998  456 56899999999999999999999998732  334444443  2334566778899


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFVK  114 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~~  114 (133)
                      +.|+..+|+.|.+++++..|=|+.
T Consensus       284 RwmLmVNP~RRATieDiAsHWWvN  307 (668)
T KOG0611|consen  284 RWMLMVNPERRATIEDIASHWWVN  307 (668)
T ss_pred             HHHHhcCcccchhHHHHhhhheee
Confidence            999999999999999999998875

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.63  E-value=1.8e-15  Score=103.16  Aligned_cols=104  Identities=35%  Similarity=0.570  Sum_probs=78.5

Q ss_pred             cccccccccccccccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC-CCCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNS-KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP-IPDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~-~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   92 (133)
                      ...|+..|++||.+.. ....++.++|+||+|+++|++++|..||...+  .....+.....+. .....+..+.+++.+
T Consensus       170 ~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  249 (308)
T cd06634         170 XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDS  249 (308)
T ss_pred             cccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHHH
Confidence            3468889999999752 11346789999999999999999999986654  2233333332222 234577889999999


Q ss_pred             HcccCCCCCCCHHHHhhCCCCCCCCCCC
Q 032788           93 CLQVNPNDRPTAAQLMEHPFVKRPLPTS  120 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~~~~~~~~~  120 (133)
                      ||..+|.+||++++++.|+|+....+..
T Consensus       250 cl~~~P~~Rp~~~~ll~~~~~~~~~~~~  277 (308)
T cd06634         250 CLQKIPQDRPTSEVLLKHRFVLRERPPT  277 (308)
T ss_pred             HhhCCcccCCCHHHHhhCccccccCChh
Confidence            9999999999999999999998754433

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.63  E-value=2.7e-15  Score=102.10  Aligned_cols=96  Identities=27%  Similarity=0.505  Sum_probs=75.1

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCC--CCCCCCCCCHHHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGE--LPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~   93 (133)
                      ..|+..|++||.+..  ..++.++|+||+|+++|++++|..||.+..  ..........  .+......+..+.+++.+|
T Consensus       176 ~~~~~~y~aPE~~~~--~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  253 (305)
T cd05609         176 VCGTPEYIAPEVILR--QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRL  253 (305)
T ss_pred             CccCccccCchhccC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHH
Confidence            467889999999877  458899999999999999999999997653  2233333222  1122235688899999999


Q ss_pred             cccCCCCCCC---HHHHhhCCCCCC
Q 032788           94 LQVNPNDRPT---AAQLMEHPFVKR  115 (133)
Q Consensus        94 l~~~p~~R~s---~~~~l~~~~~~~  115 (133)
                      |..+|.+|++   +.++++|+||..
T Consensus       254 l~~~P~~R~~~~~~~~ll~~~~~~~  278 (305)
T cd05609         254 LRQNPLERLGTGGAFEVKQHRFFLG  278 (305)
T ss_pred             hccChhhccCccCHHHHHhCccccC
Confidence            9999999997   789999999954

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.63  E-value=1.8e-15  Score=99.12  Aligned_cols=109  Identities=32%  Similarity=0.441  Sum_probs=80.5

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC------------------
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP------------------   77 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~------------------   77 (133)
                      .+-|.+|.|||.+-+. ..|+..+|+||+||++.|++.|.+-|.+..  +++..+......+                  
T Consensus       161 ~V~TRWYRAPELLfGs-r~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~  239 (318)
T KOG0659|consen  161 QVVTRWYRAPELLFGS-RQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQ  239 (318)
T ss_pred             ceeeeeccChHHhccc-hhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHh
Confidence            3778899999998874 579999999999999999999887776654  3443332211111                  


Q ss_pred             ---------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCC--CCCCCCccc
Q 032788           78 ---------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP--TSWGLPTPH  127 (133)
Q Consensus        78 ---------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~--~~~~~~~~~  127 (133)
                               +-...+.+..+++..++..||.+|+++.|+++|+||+....  ....+|.|.
T Consensus       240 ~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt~~~~lp~p~  300 (318)
T KOG0659|consen  240 QFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPTPPSKLPIPS  300 (318)
T ss_pred             cCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCCCChhhCcCCc
Confidence                     01134567899999999999999999999999999985433  444455543

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.63  E-value=1.9e-15  Score=100.81  Aligned_cols=96  Identities=32%  Similarity=0.596  Sum_probs=70.8

Q ss_pred             cccccccccccccccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCC-CCC-C--CCCCCHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNS-KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGE-LPP-I--PDSVSRDARDF   89 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~-~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~-~~~-~--~~~~~~~~~~~   89 (133)
                      ...|+..|+|||.+.. ....++.++|+||+|+++|++.++..||....  .......... .+. .  ....+..+.++
T Consensus       165 ~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  244 (267)
T cd06645         165 SFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHF  244 (267)
T ss_pred             cccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHH
Confidence            3478899999999752 11347889999999999999999999986543  2222111111 111 1  12356788999


Q ss_pred             HHHHcccCCCCCCCHHHHhhCCC
Q 032788           90 ILKCLQVNPNDRPTAAQLMEHPF  112 (133)
Q Consensus        90 ~~~~l~~~p~~R~s~~~~l~~~~  112 (133)
                      +.+|+..+|++||+++++++|||
T Consensus       245 i~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         245 VKMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             HHHHccCCchhCcCHHHHhcCCC
Confidence            99999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.63  E-value=9.8e-16  Score=115.86  Aligned_cols=86  Identities=21%  Similarity=0.458  Sum_probs=74.7

Q ss_pred             cccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccCC
Q 032788           22 WNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQVNP   98 (133)
Q Consensus        22 ~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p   98 (133)
                      ..|||||.+..  ..++.|+||||+||++||+++ |..||.+.+  +.+.....+...+.|.-++..+.++|..||.-+|
T Consensus       868 vkWm~PEsl~d--~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~p  945 (1025)
T KOG1095|consen  868 VKWMPPESLKD--GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDPPSYCPEKLYQLMLQCWKHDP  945 (1025)
T ss_pred             eecCCHHHHhh--cccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCCCCCCChHHHHHHHHHccCCh
Confidence            47999999998  459999999999999999988 888997764  4455466666778899999999999999999999


Q ss_pred             CCCCCHHHHhh
Q 032788           99 NDRPTAAQLME  109 (133)
Q Consensus        99 ~~R~s~~~~l~  109 (133)
                      .+||++..++.
T Consensus       946 e~RP~F~~i~~  956 (1025)
T KOG1095|consen  946 EDRPSFRTIVE  956 (1025)
T ss_pred             hhCccHHHHHh
Confidence            99999998876

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.62  E-value=2.1e-15  Score=101.44  Aligned_cols=95  Identities=34%  Similarity=0.570  Sum_probs=70.0

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh--------------------CC-
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR--------------------GE-   74 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~--------------------~~-   74 (133)
                      ..++..|++||++... ..++.++|+||+|+++|++++|..+|....  .....+..                    +. 
T Consensus       160 ~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (286)
T cd07846         160 YVATRWYRAPELLVGD-TKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMR  238 (286)
T ss_pred             ccceeeccCcHHhccc-cccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccc
Confidence            4678899999998652 346789999999999999999998885432  11111110                    00 


Q ss_pred             CCC---------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           75 LPP---------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        75 ~~~---------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                      .+.         ....++..+.+++.+||..+|.+||++.++++|+||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         239 LPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             cccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence            000         012456789999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.62  E-value=7.8e-16  Score=104.26  Aligned_cols=99  Identities=33%  Similarity=0.562  Sum_probs=75.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH--HHHHHHhCCCC--CCCCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELP--PIPDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~   92 (133)
                      ...|++.|++||.+..  ..++.++|+|++|+++|++++|..||...+.  ..........+  ..+...+..+.++++.
T Consensus       174 ~~~~~~~y~~PE~~~~--~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  251 (293)
T cd06647         174 TMVGTPYWMAPEVVTR--KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNR  251 (293)
T ss_pred             cccCChhhcCchhhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHH
Confidence            3468888999999876  4478899999999999999999999976542  11111111111  1233457789999999


Q ss_pred             HcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           93 CLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      ||..+|++|+++++++.|+||....
T Consensus       252 ~l~~~p~~Rp~~~~il~h~~~~~~~  276 (293)
T cd06647         252 CLEMDVEKRGSAKELLQHPFLKIAK  276 (293)
T ss_pred             HccCChhhCcCHHHHhcCHHHhcCc
Confidence            9999999999999999999997543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.62  E-value=1.7e-16  Score=110.31  Aligned_cols=97  Identities=25%  Similarity=0.392  Sum_probs=74.0

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC-CCCCCC--CCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG-ELPPIP--DSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~-~~~~~~--~~~~~~~~~~~~   91 (133)
                      ..+||+.|+|||++..  ..++.++|+||+||++|+|++|..||.+..  .....+... .....+  ...+..+.+++.
T Consensus       195 ~~~gt~~Y~APE~~~~--~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~  272 (360)
T cd05627         195 STVGTPDYIAPEVFMQ--TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLIL  272 (360)
T ss_pred             ccCCCccccCHHHHcC--CCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHH
Confidence            4589999999999987  458999999999999999999999997654  223333321 111222  236788999999


Q ss_pred             HHcccCCCCCC---CHHHHhhCCCCCCC
Q 032788           92 KCLQVNPNDRP---TAAQLMEHPFVKRP  116 (133)
Q Consensus        92 ~~l~~~p~~R~---s~~~~l~~~~~~~~  116 (133)
                      +++ .+|.+|+   +++++++||||.+.
T Consensus       273 ~l~-~~p~~R~~~~~~~ei~~hp~f~~~  299 (360)
T cd05627         273 RFC-TDSENRIGSNGVEEIKSHPFFEGV  299 (360)
T ss_pred             Hhc-cChhhcCCCCCHHHHhcCCCCCCC
Confidence            876 4899997   58999999999863

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.62  E-value=2.2e-15  Score=101.14  Aligned_cols=88  Identities=22%  Similarity=0.386  Sum_probs=70.6

Q ss_pred             ccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccC
Q 032788           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQVN   97 (133)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   97 (133)
                      +..|++||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+........+..++..+.+++.+|+..+
T Consensus       184 ~~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~  261 (277)
T cd05036         184 PIKWMPPEAFLD--GIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHT  261 (277)
T ss_pred             cHhhCCHHHHhc--CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCC
Confidence            457999999976  448999999999999999986 888887643  223333333344556678899999999999999


Q ss_pred             CCCCCCHHHHhhC
Q 032788           98 PNDRPTAAQLMEH  110 (133)
Q Consensus        98 p~~R~s~~~~l~~  110 (133)
                      |.+||++.++++|
T Consensus       262 p~~Rps~~~vl~~  274 (277)
T cd05036         262 PEDRPNFATILER  274 (277)
T ss_pred             cccCcCHHHHHHH
Confidence            9999999999976

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.62  E-value=2.5e-15  Score=103.17  Aligned_cols=103  Identities=27%  Similarity=0.322  Sum_probs=76.2

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCC------------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELP------------------   76 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~------------------   76 (133)
                      ...++..|++||.+... ..++.++|+||+|+++|++++|..||.+..  .....+......                  
T Consensus       165 ~~~~~~~y~aPE~~~~~-~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  243 (330)
T cd07834         165 EYVVTRWYRAPELLLSS-SRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYL  243 (330)
T ss_pred             ccccccCcCCceeeecc-cCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHH
Confidence            34678889999999874 257899999999999999999999986543  111111110000                  


Q ss_pred             ------------CCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCCCC
Q 032788           77 ------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS  120 (133)
Q Consensus        77 ------------~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~~~  120 (133)
                                  ......+..+.+++.+||..+|.+||++++++.|+||.......
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~  299 (330)
T cd07834         244 KSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPE  299 (330)
T ss_pred             hhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcccc
Confidence                        00123567889999999999999999999999999998654443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.62  E-value=2.3e-15  Score=99.90  Aligned_cols=96  Identities=30%  Similarity=0.493  Sum_probs=75.6

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCC--CCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDS--VSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   92 (133)
                      ...++..|++||....  ..++.++|+|++|+++|++++|..||....  ........+. ...+..  .+..+.+++.+
T Consensus       160 ~~~~~~~~~~Pe~~~~--~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~  236 (265)
T cd05579         160 RIVGTPDYIAPEVILG--QGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGK-IEWPEDVEVSDEAIDLISK  236 (265)
T ss_pred             CcccCccccCHHHhcC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-cCCCccccCCHHHHHHHHH
Confidence            3477888999999887  347889999999999999999999987544  2222332222 222333  38899999999


Q ss_pred             HcccCCCCCCCH---HHHhhCCCCCC
Q 032788           93 CLQVNPNDRPTA---AQLMEHPFVKR  115 (133)
Q Consensus        93 ~l~~~p~~R~s~---~~~l~~~~~~~  115 (133)
                      ||..+|.+||++   .+++.||||.+
T Consensus       237 ~l~~~p~~Rpt~~~~~~~l~~~~~~~  262 (265)
T cd05579         237 LLVPDPEKRLGAKSIEEIKNHPFFKG  262 (265)
T ss_pred             HhcCCHhhcCCCccHHHHhcCccccC
Confidence            999999999999   99999999975

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.62  E-value=2.7e-15  Score=101.26  Aligned_cols=90  Identities=18%  Similarity=0.396  Sum_probs=72.3

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..++..|+|||.+..  ..++.++|+||+|+++|++++ |..||....  .....+..+.....+...+..+.+++.+||
T Consensus       182 ~~~~~~y~aPE~~~~--~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l  259 (288)
T cd05093         182 TMLPIRWMPPESIMY--RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPKEVYDLMLGCW  259 (288)
T ss_pred             CCccccccCHHHhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHc
Confidence            345678999999987  448899999999999999998 888886643  334445555544556677889999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032788           95 QVNPNDRPTAAQLME  109 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~  109 (133)
                      ..+|.+||++++++.
T Consensus       260 ~~~p~~Rpt~~~v~~  274 (288)
T cd05093         260 QREPHMRLNIKEIHS  274 (288)
T ss_pred             cCChhhCCCHHHHHH
Confidence            999999999999854

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.62  E-value=2.9e-15  Score=100.07  Aligned_cols=89  Identities=20%  Similarity=0.387  Sum_probs=71.5

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+...+.+..++..+.+++..||.
T Consensus       169 ~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~  246 (266)
T cd05064         169 KSPVLWAAPEAIQY--HHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQ  246 (266)
T ss_pred             CCceeecCHHHHhh--CCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcC
Confidence            34568999999877  458999999999999999775 999987654  3334444444445567788999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032788           96 VNPNDRPTAAQLME  109 (133)
Q Consensus        96 ~~p~~R~s~~~~l~  109 (133)
                      .+|.+||+++++++
T Consensus       247 ~~p~~RP~~~~i~~  260 (266)
T cd05064         247 KERGERPRFSQIHS  260 (266)
T ss_pred             CCchhCCCHHHHHH
Confidence            99999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.62  E-value=1.6e-15  Score=104.19  Aligned_cols=96  Identities=29%  Similarity=0.497  Sum_probs=69.6

Q ss_pred             cccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH--HHHHHHhCCC----------------------
Q 032788           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGEL----------------------   75 (133)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~--~~~~~~~~~~----------------------   75 (133)
                      ++..|++||.+......++.++|+||+|+++|++++|..||.....  ..........                      
T Consensus       170 ~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (328)
T cd08226         170 SVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSG  249 (328)
T ss_pred             CccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhh
Confidence            4456999999976323478899999999999999999999975431  1111111000                      


Q ss_pred             ------------------------CCCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           76 ------------------------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        76 ------------------------~~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                                              .......+..+.+++.+||..||.+||++.++++|+||..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~  313 (328)
T cd08226         250 VDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQ  313 (328)
T ss_pred             hhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHH
Confidence                                    0001123457889999999999999999999999999964

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.62  E-value=3e-15  Score=101.21  Aligned_cols=90  Identities=19%  Similarity=0.401  Sum_probs=72.5

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..++..|++||.+..  ..++.++|+||+|+++|++++ |..||....  .....+..+.....+...+..+.+++.+||
T Consensus       185 ~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  262 (291)
T cd05094         185 TMLPIRWMPPESIMY--RKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDIMLGCW  262 (291)
T ss_pred             CCcceeecChHHhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCCCCCCCccCCHHHHHHHHHHc
Confidence            456778999999987  448889999999999999998 999986543  333444445544556667889999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032788           95 QVNPNDRPTAAQLME  109 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~  109 (133)
                      ..+|.+||+++++++
T Consensus       263 ~~~P~~Rpt~~~v~~  277 (291)
T cd05094         263 QREPQQRLNIKEIYK  277 (291)
T ss_pred             ccChhhCcCHHHHHH
Confidence            999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.62  E-value=3.6e-15  Score=100.81  Aligned_cols=95  Identities=25%  Similarity=0.384  Sum_probs=70.4

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCC---------------------
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGE---------------------   74 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~---------------------   74 (133)
                      ..++..|++||.+... ..++.++|+||+|+++|++++|..||....  ....++....                     
T Consensus       166 ~~~~~~~~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (293)
T cd07843         166 LVVTLWYRAPELLLGA-KEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKT  244 (293)
T ss_pred             ccccccccCchhhcCC-ccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccc
Confidence            4677889999998753 236889999999999999999999986543  1111111100                     


Q ss_pred             ---------CCCCCCC-CCHHHHHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           75 ---------LPPIPDS-VSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        75 ---------~~~~~~~-~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                               ....+.. ++..+.+++..||..+|.+||++.|++.|+||
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         245 FTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             cccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence                     0011222 47788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.62  E-value=3.2e-15  Score=100.51  Aligned_cols=90  Identities=21%  Similarity=0.437  Sum_probs=73.4

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .+++.|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+..++..+.+++..||+
T Consensus       187 ~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~  264 (283)
T cd05091         187 LLPIRWMSPEAIMY--GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWN  264 (283)
T ss_pred             cCCccccCHHHHhc--CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhC
Confidence            45678999999876  448889999999999999997 777876643  3444555555555677889999999999999


Q ss_pred             cCCCCCCCHHHHhhC
Q 032788           96 VNPNDRPTAAQLMEH  110 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~  110 (133)
                      .+|.+||+++++++.
T Consensus       265 ~~p~~RP~~~~i~~~  279 (283)
T cd05091         265 EFPSRRPRFKDIHSR  279 (283)
T ss_pred             CCcccCCCHHHHHHH
Confidence            999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.62  E-value=4.2e-15  Score=102.45  Aligned_cols=103  Identities=31%  Similarity=0.348  Sum_probs=74.7

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCC--------------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGE--------------------   74 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~--------------------   74 (133)
                      ...|+..|++||.+... ..++.++|+||+|+++|++++|..||.+..  .....+....                    
T Consensus       171 ~~~~~~~y~aPE~~~~~-~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (337)
T cd07852         171 DYVATRWYRAPEILLGS-TRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATML  249 (337)
T ss_pred             cccccccccCceeeecc-ccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhh
Confidence            35688899999988652 346889999999999999999999986432  1111110000                    


Q ss_pred             ---C-------CCCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCCCC
Q 032788           75 ---L-------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS  120 (133)
Q Consensus        75 ---~-------~~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~~~  120 (133)
                         .       .......+..+.+++..||..+|.+||++.++++|+|+.+.....
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~~  305 (337)
T cd07852         250 DSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNPS  305 (337)
T ss_pred             hhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccCC
Confidence               0       001122577899999999999999999999999999998754433

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.62  E-value=1.3e-15  Score=100.96  Aligned_cols=92  Identities=25%  Similarity=0.484  Sum_probs=75.2

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ...|+..|+|||++..  ..++.++|+||+|+++|++++|..||...+  .....+..+.....+...+..+.+++.+||
T Consensus       159 ~~~~~~~~~aPE~~~~--~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  236 (255)
T cd08219         159 TYVGTPYYVPPEIWEN--MPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPSHYSYELRSLIKQMF  236 (255)
T ss_pred             cccCCccccCHHHHcc--CCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHH
Confidence            3568889999999977  348899999999999999999999997654  233444445555566678889999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032788           95 QVNPNDRPTAAQLMEH  110 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~  110 (133)
                      ..+|.+||++.+++.-
T Consensus       237 ~~~P~~Rp~~~~il~~  252 (255)
T cd08219         237 KRNPRSRPSATTILSR  252 (255)
T ss_pred             hCCcccCCCHHHHhhc
Confidence            9999999999999753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.62  E-value=3.6e-15  Score=98.43  Aligned_cols=94  Identities=40%  Similarity=0.854  Sum_probs=76.5

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ..|+..|++||....  ..++.++|+|++|+++|++++|..||....  ..............+...+..+.+++.+|+.
T Consensus       159 ~~~~~~y~~pe~~~~--~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  236 (254)
T cd06627         159 VVGTPYWMAPEVIEM--SGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEGISPELKDFLMQCFQ  236 (254)
T ss_pred             cccchhhcCHhhhcC--CCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHh
Confidence            467888999999876  337889999999999999999999987644  2222233344445566778999999999999


Q ss_pred             cCCCCCCCHHHHhhCCCC
Q 032788           96 VNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~~~~  113 (133)
                      .+|++||++++++.|+||
T Consensus       237 ~~p~~R~~~~~~l~~~~~  254 (254)
T cd06627         237 KDPNLRPTAKQLLKHPWI  254 (254)
T ss_pred             CChhhCcCHHHHhcCCCC
Confidence            999999999999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.62  E-value=1.5e-15  Score=100.81  Aligned_cols=95  Identities=27%  Similarity=0.375  Sum_probs=76.8

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH----HHHHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ...|+..|++||.+...  .++.++|+|++|+++|++++|..||....    ..............+...+..+.+++.+
T Consensus       158 ~~~~~~~y~~PE~~~~~--~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  235 (258)
T cd05578         158 STSGTPGYMAPEVLCRQ--GYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATWSTEAIDAINK  235 (258)
T ss_pred             ccCCChhhcCHHHHccc--CCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccccCcccCcHHHHHHHHH
Confidence            35688889999999873  37899999999999999999999987643    2222222223345566778999999999


Q ss_pred             HcccCCCCCCCH--HHHhhCCCC
Q 032788           93 CLQVNPNDRPTA--AQLMEHPFV  113 (133)
Q Consensus        93 ~l~~~p~~R~s~--~~~l~~~~~  113 (133)
                      ||..+|.+|+++  +++++|+||
T Consensus       236 ~l~~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         236 LLERDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             HccCChhHcCCccHHHHhcCCCC
Confidence            999999999999  999999997

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.61  E-value=2.6e-15  Score=103.55  Aligned_cols=100  Identities=25%  Similarity=0.356  Sum_probs=73.3

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHH-----------------------h
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIA-----------------------R   72 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~-----------------------~   72 (133)
                      ..++..|++||.+... ..++.++|+|++|+++|++++|..||.+.+  .....+.                       .
T Consensus       168 ~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (337)
T cd07858         168 YVVTRWYRAPELLLNC-SEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIR  246 (337)
T ss_pred             cccccCccChHHHhcC-CCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHH
Confidence            4678889999988652 237889999999999999999999986532  1110000                       0


Q ss_pred             CC--CC-----CCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           73 GE--LP-----PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        73 ~~--~~-----~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      ..  ..     ......+..+.+++.+||..+|.+||+++++++|+|+.....
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~  299 (337)
T cd07858         247 SLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHD  299 (337)
T ss_pred             hcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcC
Confidence            00  00     012246778899999999999999999999999999986433

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.61  E-value=2e-15  Score=105.59  Aligned_cols=103  Identities=24%  Similarity=0.405  Sum_probs=81.1

Q ss_pred             hccccccccccccccccCCCC--CCchhHHHHHHHHHHHHHhCCCCCCChH-HHHHHHHhCCCCCCCCC--CCHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGG--YGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDS--VSRDARDFI   90 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~--~~~~~diws~g~~~~~l~~~~~p~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~   90 (133)
                      ...+|||.|+|||........  .+.+.|||++||.+|.++.|..||.+.. ..+..-+.......|..  ....+.+++
T Consensus       273 ~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli  352 (576)
T KOG0585|consen  273 SRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLI  352 (576)
T ss_pred             hhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHH
Confidence            347999999999998863211  2568899999999999999999998876 33333333333344443  678999999


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      .++|..||++|+++.++..|||+.....
T Consensus       353 ~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~  380 (576)
T KOG0585|consen  353 KRLLEKDPEQRITLPDIKLHPWVTRDGD  380 (576)
T ss_pred             HHHhhcChhheeehhhheecceeccCCC
Confidence            9999999999999999999999987643

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.61  E-value=4.4e-15  Score=98.52  Aligned_cols=89  Identities=25%  Similarity=0.332  Sum_probs=72.0

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|+|||.+..  ..++.++|+||+|+++|++++ |..||....  .....+..+.....+...+..+.+++.+||.
T Consensus       162 ~~~~~y~aPE~~~~--~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~  239 (256)
T cd05114         162 KFPVKWSPPEVFNF--SKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLASMTVYEVMYSCWH  239 (256)
T ss_pred             CCchhhCChhhccc--CccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcc
Confidence            34557999999986  348899999999999999998 888987654  3444555554445566678889999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032788           96 VNPNDRPTAAQLME  109 (133)
Q Consensus        96 ~~p~~R~s~~~~l~  109 (133)
                      .+|++||+++++++
T Consensus       240 ~~p~~Rps~~~l~~  253 (256)
T cd05114         240 EKPEGRPTFAELLR  253 (256)
T ss_pred             CCcccCcCHHHHHH
Confidence            99999999999975

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.61  E-value=3.7e-15  Score=100.27  Aligned_cols=89  Identities=18%  Similarity=0.337  Sum_probs=71.4

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .+++.|++||.+..  ..++.++|+||+|+++|++++ |..||....  ........+.....+..++..+.+++..||.
T Consensus       185 ~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  262 (280)
T cd05092         185 MLPIRWMPPESILY--RKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRELERPRTCPPEVYAIMQGCWQ  262 (280)
T ss_pred             cccccccCHHHhcc--CCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHcc
Confidence            34677999999987  448999999999999999997 888886543  3344444444445566788999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032788           96 VNPNDRPTAAQLME  109 (133)
Q Consensus        96 ~~p~~R~s~~~~l~  109 (133)
                      .||.+||++++++.
T Consensus       263 ~~P~~Rp~~~~l~~  276 (280)
T cd05092         263 REPQQRMVIKDIHS  276 (280)
T ss_pred             CChhhCCCHHHHHH
Confidence            99999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.61  E-value=3.2e-15  Score=108.15  Aligned_cols=98  Identities=23%  Similarity=0.256  Sum_probs=70.1

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCC-CCChH----HHHHHHHhCC-----------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRP-YFGVE----WALFKIARGE-----------------   74 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p-~~~~~----~~~~~~~~~~-----------------   74 (133)
                      ..+||..|++||++.+  ..++.++|+||+||++|+++++..+ +....    ..+..+....                 
T Consensus       327 ~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  404 (501)
T PHA03210        327 GWVGTVATNSPEILAG--DGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDY  404 (501)
T ss_pred             cccCCcCCCCchhhcC--CCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHH
Confidence            3589999999999987  4589999999999999999987643 32211    1121111100                 


Q ss_pred             -----CCCC---------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           75 -----LPPI---------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        75 -----~~~~---------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                           ....         ...++..+.+++.+|+..||.+||++.|++.||||...
T Consensus       405 i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~  460 (501)
T PHA03210        405 IDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAE  460 (501)
T ss_pred             hhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcC
Confidence                 0000         11244567788999999999999999999999999753

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.61  E-value=5.8e-15  Score=99.68  Aligned_cols=95  Identities=28%  Similarity=0.346  Sum_probs=69.7

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH---HHHHHHhCCC-------------C----C
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW---ALFKIARGEL-------------P----P   77 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~---~~~~~~~~~~-------------~----~   77 (133)
                      ..++..|++||.+.+. ..++.++|+||+|+++|++++|..||.+...   .+........             +    .
T Consensus       163 ~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (291)
T cd07870         163 EVVTLWYRPPDVLLGA-TDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPE  241 (291)
T ss_pred             ccccccccCCceeecC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccch
Confidence            4578899999998752 3478899999999999999999999975431   1111110000             0    0


Q ss_pred             -----C---------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           78 -----I---------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        78 -----~---------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                           .         .......+.+++.+|+..||.+|+++++++.||||
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         242 WFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             hccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence                 0         01124678899999999999999999999999997

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.61  E-value=3.5e-15  Score=100.56  Aligned_cols=99  Identities=26%  Similarity=0.310  Sum_probs=77.0

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCC-----------------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELP-----------------   76 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~-----------------   76 (133)
                      +..+-|.+|.|||.+.+. ..|+..+|+||+||++.|++.+++.|.+..  .++.++..-...                 
T Consensus       235 T~lVVTLWYRaPELLLG~-~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~  313 (419)
T KOG0663|consen  235 TPLVVTLWYRAPELLLGA-KTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKK  313 (419)
T ss_pred             cceEEEeeecCHHHhcCC-cccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhc
Confidence            445788999999999985 569999999999999999999998887754  333333221110                 


Q ss_pred             ----CCC----------CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           77 ----PIP----------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        77 ----~~~----------~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                          ..+          ..++....++++.++.+||.+|.|++|.|+|.||..
T Consensus       314 ~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e  366 (419)
T KOG0663|consen  314 MTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRE  366 (419)
T ss_pred             cccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccccccc
Confidence                000          014467889999999999999999999999999986

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.61  E-value=5.4e-15  Score=101.17  Aligned_cols=104  Identities=34%  Similarity=0.545  Sum_probs=78.5

Q ss_pred             cccccccccccccccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC-CCCCCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNS-KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL-PPIPDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~-~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~   92 (133)
                      ...|+..|++||.+.. ....++.++|+||+|+++|++++|..||....  .....+..... .......+..+.+++.+
T Consensus       180 ~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  259 (317)
T cd06635         180 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDS  259 (317)
T ss_pred             cccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHH
Confidence            3478889999999742 11347889999999999999999999987654  23333333322 22233567789999999


Q ss_pred             HcccCCCCCCCHHHHhhCCCCCCCCCCC
Q 032788           93 CLQVNPNDRPTAAQLMEHPFVKRPLPTS  120 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~~~~~~~~~  120 (133)
                      ||..+|.+||++.++++|+|+....+..
T Consensus       260 ~l~~~p~~Rpt~~~il~~~~~~~~~~~~  287 (317)
T cd06635         260 CLQKIPQDRPTSEELLKHMFVLRERPET  287 (317)
T ss_pred             HccCCcccCcCHHHHHhChhhhccCccc
Confidence            9999999999999999999986654433

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.61  E-value=4.4e-15  Score=99.78  Aligned_cols=95  Identities=29%  Similarity=0.408  Sum_probs=70.1

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCC-----------------CCCC
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGE-----------------LPPI   78 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~-----------------~~~~   78 (133)
                      ..++..|++||.+... ..++.++|+|++|+++|++++|..||.+..  .....+....                 ....
T Consensus       160 ~~~~~~y~~PE~~~~~-~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd07836         160 EVVTLWYRAPDVLLGS-RTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTF  238 (284)
T ss_pred             ccccccccChHHhcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccc
Confidence            4678889999998653 346889999999999999999999987543  1111111000                 0000


Q ss_pred             -----------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           79 -----------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        79 -----------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                                 ....+..+.+++.+|+..+|.+|++++++++||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         239 PRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             cCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence                       11345678899999999999999999999999997

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.61  E-value=3.9e-15  Score=99.87  Aligned_cols=90  Identities=23%  Similarity=0.423  Sum_probs=72.0

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|+|||.+..  ..++.++|+||+|+++|++++ +..||.+..  .....+........+...+..+.+++.+||.
T Consensus       182 ~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  259 (277)
T cd05062         182 LLPVRWMSPESLKD--GVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQ  259 (277)
T ss_pred             ccCHhhcChhHhhc--CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcC
Confidence            45678999999987  448999999999999999998 688886654  2333334444445567788899999999999


Q ss_pred             cCCCCCCCHHHHhhC
Q 032788           96 VNPNDRPTAAQLMEH  110 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~  110 (133)
                      .+|.+||++.+++.+
T Consensus       260 ~~p~~Rps~~e~l~~  274 (277)
T cd05062         260 YNPKMRPSFLEIISS  274 (277)
T ss_pred             CChhhCcCHHHHHHH
Confidence            999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.61  E-value=1.3e-15  Score=100.09  Aligned_cols=104  Identities=24%  Similarity=0.400  Sum_probs=84.5

Q ss_pred             hhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhCCCCCCC-----CCCCHHH
Q 032788           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELPPIP-----DSVSRDA   86 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~~~~~~~-----~~~~~~~   86 (133)
                      .+...|-..|||||++.....+|+.++|+||+|+.+||+.+|+.|+.+++   +++..+..+..+.+-     ...+..+
T Consensus       224 kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~  303 (361)
T KOG1006|consen  224 KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSM  303 (361)
T ss_pred             hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHH
Confidence            34447777899999999765679999999999999999999999999987   444555555544332     1356789


Q ss_pred             HHHHHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           87 RDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        87 ~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      ..++..|+..|-..||...+++.++|++....
T Consensus       304 ~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~  335 (361)
T KOG1006|consen  304 VRFINTCLIKDRSDRPKYDDLKKFPFYRMYAV  335 (361)
T ss_pred             HHHHHHHhhcccccCcchhhhhcCchhhhhhh
Confidence            99999999999999999999999999986544

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.61  E-value=4.1e-15  Score=102.44  Aligned_cols=100  Identities=29%  Similarity=0.422  Sum_probs=74.0

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHH-----------------------h
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIA-----------------------R   72 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~-----------------------~   72 (133)
                      .+|+..|++||.+... ..++.++|+|++|+++|++++|+.||.+..  .....+.                       .
T Consensus       171 ~~~~~~y~~PE~~~~~-~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  249 (334)
T cd07855         171 YVATRWYRAPELLLSL-PEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQ  249 (334)
T ss_pred             ccccccccChHHhcCC-cccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHh
Confidence            4788899999998652 347889999999999999999999996532  1111000                       0


Q ss_pred             --CCCCCC-----CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           73 --GELPPI-----PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        73 --~~~~~~-----~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                        ......     ....+..+.+++.+|+..+|++||+++++++|||+.+...
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~  302 (334)
T cd07855         250 NLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHD  302 (334)
T ss_pred             hcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccC
Confidence              000011     1235788999999999999999999999999999976544

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.61  E-value=5.6e-15  Score=98.52  Aligned_cols=94  Identities=39%  Similarity=0.647  Sum_probs=75.3

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHH-HHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALF-KIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...|+..|++||.+..  ..++.++|+||+|+++|++++|..||....  .... .......+..+......+.+++..|
T Consensus       168 ~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~  245 (264)
T cd06653         168 SVTGTPYWMSPEVISG--EGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDFLKQI  245 (264)
T ss_pred             ccCCcccccCHhhhcC--CCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHHHHHH
Confidence            3468889999999987  347889999999999999999999997654  2222 2222333456778889999999999


Q ss_pred             cccCCCCCCCHHHHhhCCCC
Q 032788           94 LQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~~~~  113 (133)
                      +. ++..||++.+++.|||+
T Consensus       246 l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         246 FV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             hc-CcccCccHHHHhcCCCC
Confidence            98 46999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.61  E-value=4e-15  Score=102.42  Aligned_cols=98  Identities=27%  Similarity=0.392  Sum_probs=72.7

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC----------------------
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG----------------------   73 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~----------------------   73 (133)
                      ..|+..|++||.+... ..++.++|+||+|+++|+++.|..||...+  ..+..+...                      
T Consensus       169 ~~g~~~y~aPE~~~~~-~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (332)
T cd07857         169 YVATRWYRAPEIMLSF-QSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIR  247 (332)
T ss_pred             cccCccccCcHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHH
Confidence            4788999999987652 347899999999999999999999886532  111111000                      


Q ss_pred             ---CCC-----CCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           74 ---ELP-----PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        74 ---~~~-----~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                         ..+     ......+..+.+++.+|+..+|.+|+++.+++.|||+.++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~  298 (332)
T cd07857         248 SLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIW  298 (332)
T ss_pred             hccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhh
Confidence               000     0112346789999999999999999999999999999754

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.61  E-value=4.4e-15  Score=99.60  Aligned_cols=95  Identities=33%  Similarity=0.486  Sum_probs=70.7

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCC-------------------
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELP-------------------   76 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~-------------------   76 (133)
                      ..++..|++||.+... ..++.++|+|++|+++|++++|..+|...+  .....+......                   
T Consensus       158 ~~~~~~~~~PE~~~~~-~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (283)
T cd05118         158 YVVTRWYRAPELLLGD-KGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFS  236 (283)
T ss_pred             ccCcccccCcHHHhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhh
Confidence            4577889999998763 257899999999999999999998886533  111111110000                   


Q ss_pred             ----------CCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           77 ----------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        77 ----------~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                                ......+..+.+++..||..+|.+||++++++.|||+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         237 FPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             hccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence                      0112356788999999999999999999999999996

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.60  E-value=4.5e-16  Score=103.17  Aligned_cols=96  Identities=29%  Similarity=0.473  Sum_probs=72.9

Q ss_pred             hccccccccccccccc-cCCCCCCchhHHHHHHHHHHHHHhCCCCCCCh---H--HHHHHHHhCCC---CCCCCCCCHHH
Q 032788           16 KWHVSRWNSLTDQVVN-SKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV---E--WALFKIARGEL---PPIPDSVSRDA   86 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~-~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~---~--~~~~~~~~~~~---~~~~~~~~~~~   86 (133)
                      ....++..|+|||.+. .  ..++.++|+||+|+++|++++|..||...   +  ...........   ..........+
T Consensus       156 ~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  233 (260)
T PF00069_consen  156 NPFVGTPEYMAPEVLQQG--KKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEEL  233 (260)
T ss_dssp             SSSSSSGGGSCHHHHTTT--SSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHH
T ss_pred             cccccccccccccccccc--ccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHH
Confidence            3458899999999988 4  44799999999999999999999999875   1  11111111111   01111224899


Q ss_pred             HHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           87 RDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        87 ~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                      .+++..||..||.+||++.++++||||
T Consensus       234 ~~li~~~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  234 RDLIKKMLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             HHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred             HHHHHHHccCChhHCcCHHHHhcCCCC
Confidence            999999999999999999999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.60  E-value=3.8e-15  Score=100.71  Aligned_cols=98  Identities=30%  Similarity=0.453  Sum_probs=72.6

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC---CC-----------------
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG---EL-----------------   75 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~---~~-----------------   75 (133)
                      ..|+..|++||.+.+. ..++.++|+||+|+++|++++|..||....  .....+...   ..                 
T Consensus       163 ~~~~~~y~~PE~~~~~-~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (294)
T PLN00009        163 EVVTLWYRAPEILLGS-RHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAF  241 (294)
T ss_pred             CceeecccCHHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhc
Confidence            4667889999988653 347889999999999999999999986543  122111110   00                 


Q ss_pred             CC--------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           76 PP--------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        76 ~~--------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      +.        .....+..+.+++.+|+..+|.+||+++++++|+||...
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~  290 (294)
T PLN00009        242 PKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDL  290 (294)
T ss_pred             ccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHH
Confidence            00        012356778999999999999999999999999999764

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.60  E-value=8.7e-15  Score=98.81  Aligned_cols=95  Identities=24%  Similarity=0.468  Sum_probs=74.4

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|++||.+..  ..++.++|+||+|+++|++++ +..||.+..  .....+..+.....+...+..+.+++.+|+.
T Consensus       182 ~~~~~y~~pE~~~~--~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  259 (288)
T cd05061         182 LLPVRWMAPESLKD--GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQ  259 (288)
T ss_pred             cccccccCHHHhcc--CCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcC
Confidence            44667999999876  448899999999999999987 778886644  3333333344444556678899999999999


Q ss_pred             cCCCCCCCHHHHhh------CCCCCC
Q 032788           96 VNPNDRPTAAQLME------HPFVKR  115 (133)
Q Consensus        96 ~~p~~R~s~~~~l~------~~~~~~  115 (133)
                      .+|.+||++.++++      |++|++
T Consensus       260 ~~p~~Rps~~~ll~~l~~~~~~~~~~  285 (288)
T cd05061         260 FNPKMRPTFLEIVNLLKDDLHPSFPE  285 (288)
T ss_pred             CChhHCcCHHHHHHHHHhhcCCCCCC
Confidence            99999999999876      777754

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.60  E-value=7.3e-15  Score=98.66  Aligned_cols=95  Identities=25%  Similarity=0.364  Sum_probs=69.9

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCC-------------------
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELP-------------------   76 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~-------------------   76 (133)
                      ..++..|++||.+.+. ..++.++|+|++|+++|++++|..||....  ..+..+......                   
T Consensus       161 ~~~~~~y~~PE~~~~~-~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (287)
T cd07840         161 RVITLWYRPPELLLGA-TRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLK  239 (287)
T ss_pred             cccccccCCceeeEcc-ccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhcc
Confidence            3567789999987653 347889999999999999999999987543  111111110000                   


Q ss_pred             ---C--------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           77 ---P--------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        77 ---~--------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                         .        .....+..+.+++.+||..+|.+||++++++.|+||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         240 PKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             ccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence               0        001137788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.60  E-value=7.9e-15  Score=97.74  Aligned_cols=88  Identities=20%  Similarity=0.431  Sum_probs=70.4

Q ss_pred             ccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccC
Q 032788           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQVN   97 (133)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   97 (133)
                      +..|++||.+.+  ..++.++|+||+|+++|++++ |..||.+..  .....+........+...+..+.+++.+||..+
T Consensus       168 ~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  245 (263)
T cd05052         168 PIKWTAPESLAY--NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERPEGCPPKVYELMRACWQWN  245 (263)
T ss_pred             ccccCCHHHhcc--CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCC
Confidence            457999999876  447889999999999999997 888886543  233334444444556778899999999999999


Q ss_pred             CCCCCCHHHHhhC
Q 032788           98 PNDRPTAAQLMEH  110 (133)
Q Consensus        98 p~~R~s~~~~l~~  110 (133)
                      |++||++.++++.
T Consensus       246 p~~Rp~~~~l~~~  258 (263)
T cd05052         246 PSDRPSFAEIHQA  258 (263)
T ss_pred             cccCCCHHHHHHH
Confidence            9999999998763

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.60  E-value=2.9e-15  Score=102.99  Aligned_cols=89  Identities=19%  Similarity=0.330  Sum_probs=77.9

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .....||++|.+..  ..|+..+|+|++|+++||+++ |+.|+.+.+  +....++.+.....|..+++++..++.-||+
T Consensus       459 nRPvkWMslEal~n--~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRlaQP~NCPDeLf~vMacCWa  536 (563)
T KOG1024|consen  459 NRPVKWMSLEALQN--SHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRLAQPFNCPDELFTVMACCWA  536 (563)
T ss_pred             CCcccccCHHHHhh--hhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccceecCCCCCcHHHHHHHHHHHh
Confidence            34457999999988  459999999999999999977 889998766  5566777888888899999999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032788           96 VNPNDRPTAAQLME  109 (133)
Q Consensus        96 ~~p~~R~s~~~~l~  109 (133)
                      .+|.+||+++|+..
T Consensus       537 llpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  537 LLPEERPSFSQLVI  550 (563)
T ss_pred             cCcccCCCHHHHHH
Confidence            99999999999864

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.60  E-value=5e-15  Score=99.53  Aligned_cols=94  Identities=28%  Similarity=0.438  Sum_probs=69.5

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC------------------CC
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL------------------PP   77 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~------------------~~   77 (133)
                      ..++..|++||.+..  ..++.++|+|++|+++|++++|..+|....  ..+..+.....                  ..
T Consensus       166 ~~~~~~~~~PE~~~~--~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (287)
T cd07838         166 VVVTLWYRAPEVLLQ--SSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPS  243 (287)
T ss_pred             ccccccccChHHhcc--CCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhccc
Confidence            357888999999977  447889999999999999999988886543  11222211100                  00


Q ss_pred             C--------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           78 I--------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        78 ~--------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                      .        .......+.+++.+||..||.+||++++++.|+||
T Consensus       244 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         244 YTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             ccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence            0        01234667899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.59  E-value=6.9e-15  Score=99.28  Aligned_cols=100  Identities=25%  Similarity=0.432  Sum_probs=77.6

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHHHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WALFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ..|+..|++||.+......++.++|+|++|+++|++++|..||....     ..............+......+.+++.+
T Consensus       166 ~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  245 (290)
T cd05613         166 FCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDIIQR  245 (290)
T ss_pred             ccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCCCccCCHHHHHHHHH
Confidence            46888999999987532346789999999999999999999985321     2222222223344566788899999999


Q ss_pred             HcccCCCCCC-----CHHHHhhCCCCCCCC
Q 032788           93 CLQVNPNDRP-----TAAQLMEHPFVKRPL  117 (133)
Q Consensus        93 ~l~~~p~~R~-----s~~~~l~~~~~~~~~  117 (133)
                      ||..+|.+|+     ++++++.|+||....
T Consensus       246 ~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  275 (290)
T cd05613         246 LLMKDPKKRLGCGPSDADEIKKHPFFQKIN  275 (290)
T ss_pred             HhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence            9999999997     899999999998754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.59  E-value=1.7e-15  Score=105.91  Aligned_cols=100  Identities=25%  Similarity=0.389  Sum_probs=74.7

Q ss_pred             hccccccccccccccccCC--CCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC-CCC--CCCCCHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKN--GGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL-PPI--PDSVSRDARD   88 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~--~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~-~~~--~~~~~~~~~~   88 (133)
                      ...+||+.|+|||++....  ..++.++|+||+|+++|+|++|..||.+..  .....+..... ...  ....+..+.+
T Consensus       201 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~  280 (371)
T cd05622         201 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKN  280 (371)
T ss_pred             cCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHH
Confidence            3568999999999987531  237889999999999999999999998754  23333332221 122  2357889999


Q ss_pred             HHHHHcccCCC--CCCCHHHHhhCCCCCC
Q 032788           89 FILKCLQVNPN--DRPTAAQLMEHPFVKR  115 (133)
Q Consensus        89 ~~~~~l~~~p~--~R~s~~~~l~~~~~~~  115 (133)
                      ++..|+..++.  .|++++++++|+||..
T Consensus       281 li~~~L~~~~~r~~r~~~~ei~~h~~~~~  309 (371)
T cd05622         281 LICAFLTDREVRLGRNGVEEIKRHLFFKN  309 (371)
T ss_pred             HHHHHcCChhhhcCCCCHHHHhcCcccCC
Confidence            99999974443  3789999999999976

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.59  E-value=1.3e-14  Score=98.24  Aligned_cols=99  Identities=34%  Similarity=0.459  Sum_probs=71.3

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC---------------------
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL---------------------   75 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~---------------------   75 (133)
                      .++..|+|||.+... ..++.++|+||+|+++|++++|.++|.+..  ..+.++.....                     
T Consensus       163 ~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (298)
T cd07841         163 VVTRWYRAPELLFGA-RHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKP  241 (298)
T ss_pred             ccceeeeCHHHHhCC-CCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccc
Confidence            556789999988542 347889999999999999999977775433  11111111000                     


Q ss_pred             -CC-----CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           76 -PP-----IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        76 -~~-----~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                       ..     .....+..+.+++.+||..+|.+|+++++++.|+||.+...
T Consensus       242 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~  290 (298)
T cd07841         242 FPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPA  290 (298)
T ss_pred             cCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCC
Confidence             00     01234578889999999999999999999999999987544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.59  E-value=8e-15  Score=97.50  Aligned_cols=93  Identities=17%  Similarity=0.324  Sum_probs=68.7

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCC-CCCCChHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRC-RPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ...++..|++||.+... ..++.++|+||+|+++|++++|. .|+..................+......+.+++..||+
T Consensus       163 ~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  241 (258)
T cd05078         163 ILLERIPWVPPECIENP-QNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYEDRHQLPAPKWTELANLINQCMD  241 (258)
T ss_pred             hccccCCccCchhccCC-CCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHccccCCCCCcHHHHHHHHHHhc
Confidence            35788899999999762 34788999999999999999984 55544332111111122234455566889999999999


Q ss_pred             cCCCCCCCHHHHhhC
Q 032788           96 VNPNDRPTAAQLMEH  110 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~  110 (133)
                      .+|.+||+++++++.
T Consensus       242 ~~p~~Rps~~~il~~  256 (258)
T cd05078         242 YEPDFRPSFRAIIRD  256 (258)
T ss_pred             cChhhCCCHHHHHHh
Confidence            999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.59  E-value=1.3e-15  Score=106.47  Aligned_cols=100  Identities=27%  Similarity=0.432  Sum_probs=74.6

Q ss_pred             hccccccccccccccccCC--CCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCC-CCCCC--CCCCHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKN--GGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGE-LPPIP--DSVSRDARD   88 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~--~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~-~~~~~--~~~~~~~~~   88 (133)
                      ...+||+.|+|||++....  ..++.++|+||+|+++|++++|..||.+..  .....+.... ....+  ...+..+.+
T Consensus       201 ~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~  280 (370)
T cd05621         201 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKN  280 (370)
T ss_pred             ccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHH
Confidence            3568999999999987521  236789999999999999999999997654  2233333221 12223  246888999


Q ss_pred             HHHHHcccCCC--CCCCHHHHhhCCCCCC
Q 032788           89 FILKCLQVNPN--DRPTAAQLMEHPFVKR  115 (133)
Q Consensus        89 ~~~~~l~~~p~--~R~s~~~~l~~~~~~~  115 (133)
                      ++..|+..++.  .|++++++++||||+.
T Consensus       281 li~~~L~~~~~r~~R~~~~e~l~hp~~~~  309 (370)
T cd05621         281 LICAFLTDREVRLGRNGVEEIKQHPFFKN  309 (370)
T ss_pred             HHHHHccCchhccCCCCHHHHhcCcccCC
Confidence            99999975543  3889999999999976

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.59  E-value=7.7e-15  Score=97.12  Aligned_cols=92  Identities=26%  Similarity=0.493  Sum_probs=74.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...++..|+|||.+..  ..++.++|+||+|+++|++++ |..||....  .....+..+.....+..++..+.+++.+|
T Consensus       166 ~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  243 (262)
T cd00192         166 GGKLPIRWMAPESLKD--GIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPDELYELMLSC  243 (262)
T ss_pred             CCCcCccccCHHHhcc--CCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCccCChHHHHHHHHH
Confidence            3467888999999887  358899999999999999998 588887654  33444444555556677789999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032788           94 LQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~  110 (133)
                      +..+|.+||++++++.+
T Consensus       244 l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         244 WQLDPEDRPTFSELVER  260 (262)
T ss_pred             ccCCcccCcCHHHHHHh
Confidence            99999999999999875

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.59  E-value=1.2e-14  Score=94.88  Aligned_cols=96  Identities=32%  Similarity=0.529  Sum_probs=74.8

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCC-hH--HHHHHHHhCCCCCCCCC--CCHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG-VE--WALFKIARGELPPIPDS--VSRDARDFI   90 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~-~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~   90 (133)
                      ....++..|++||....  ..++.++|+|++|+++++++++..||.. ..  .................  .+..+.+++
T Consensus       144 ~~~~~~~~~~~pE~~~~--~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  221 (244)
T smart00220      144 TTFVGTPEYMAPEVLLG--KGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLI  221 (244)
T ss_pred             ccccCCcCCCCHHHHcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHH
Confidence            34578889999999976  4478899999999999999999999876 22  22333333332222222  778999999


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                      .+|+..+|.+||++.++++|+||
T Consensus       222 ~~~l~~~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      222 RKLLVKDPEKRLTAEEALQHPFF  244 (244)
T ss_pred             HHHccCCchhccCHHHHhhCCCC
Confidence            99999999999999999999996

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.59  E-value=9.1e-15  Score=99.10  Aligned_cols=94  Identities=23%  Similarity=0.354  Sum_probs=69.7

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC---CCC-----------------
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG---ELP-----------------   76 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~---~~~-----------------   76 (133)
                      .++..|++||.+... ..++.++|+|++|+++|++++|..||....  ..+..+...   ..+                 
T Consensus       178 ~~~~~y~~PE~~~~~-~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (302)
T cd07864         178 VITLWYRPPELLLGE-ERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKP  256 (302)
T ss_pred             eeccCccChHHhcCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccccccccccc
Confidence            456789999988653 346889999999999999999999986543  122111111   000                 


Q ss_pred             ---------CCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           77 ---------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        77 ---------~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                               .....++..+.+++..||..+|.+||++++++.|+||
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         257 KKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             ccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence                     0011357889999999999999999999999999996

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.59  E-value=1.6e-15  Score=101.04  Aligned_cols=90  Identities=24%  Similarity=0.478  Sum_probs=69.8

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..+...|++||.+...  .++.++||||+|+++||+++ +..|+....  .....+..+.....+..++..+.+++..||
T Consensus       165 ~~~~~~~~aPE~~~~~--~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~C~  242 (259)
T PF07714_consen  165 QQLPLRYLAPEVLKDG--EYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPIPDNCPKDIYSLIQQCW  242 (259)
T ss_dssp             SESGGGGS-HHHHHHS--EESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTSBTTSBHHHHHHHHHHT
T ss_pred             cccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccceeccchhHHHHHHHHHHc
Confidence            3566789999999873  48999999999999999999 678886643  334455555555667778999999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032788           95 QVNPNDRPTAAQLME  109 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~  109 (133)
                      ..+|.+||+++++++
T Consensus       243 ~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  243 SHDPEKRPSFQEILQ  257 (259)
T ss_dssp             -SSGGGS--HHHHHH
T ss_pred             CCChhhCcCHHHHHh
Confidence            999999999999875

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.59  E-value=1.1e-14  Score=98.83  Aligned_cols=88  Identities=22%  Similarity=0.401  Sum_probs=70.8

Q ss_pred             ccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccC
Q 032788           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQVN   97 (133)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   97 (133)
                      +..|++||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+..++..+.+++.+||..+
T Consensus       181 ~~~y~aPE~~~~--~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  258 (297)
T cd05089         181 PVRWMAIESLNY--SVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDR  258 (297)
T ss_pred             CccccCchhhcc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence            456999999876  448899999999999999997 989987643  333444444444556678899999999999999


Q ss_pred             CCCCCCHHHHhhC
Q 032788           98 PNDRPTAAQLMEH  110 (133)
Q Consensus        98 p~~R~s~~~~l~~  110 (133)
                      |.+||+++++++.
T Consensus       259 p~~Rp~~~~i~~~  271 (297)
T cd05089         259 PYERPPFAQISVQ  271 (297)
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999998664

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.59  E-value=9e-15  Score=97.09  Aligned_cols=87  Identities=25%  Similarity=0.526  Sum_probs=69.6

Q ss_pred             ccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccC
Q 032788           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQVN   97 (133)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   97 (133)
                      +..|++||.+..  ..++.++|+||+|+++|++++ |..||...+  .....+........+...+..+.+++.+||..+
T Consensus       161 ~~~y~aPE~~~~--~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  238 (257)
T cd05060         161 PLKWYAPECINY--GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEECPQEIYSIMLSCWKYR  238 (257)
T ss_pred             cccccCHHHhcC--CCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCC
Confidence            356999999976  448899999999999999997 899986544  233333344444556678899999999999999


Q ss_pred             CCCCCCHHHHhh
Q 032788           98 PNDRPTAAQLME  109 (133)
Q Consensus        98 p~~R~s~~~~l~  109 (133)
                      |.+||++.++++
T Consensus       239 p~~Rp~~~~l~~  250 (257)
T cd05060         239 PEDRPTFSELES  250 (257)
T ss_pred             hhhCcCHHHHHH
Confidence            999999999875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.58  E-value=4.6e-15  Score=99.78  Aligned_cols=99  Identities=29%  Similarity=0.497  Sum_probs=78.8

Q ss_pred             ccccccccccccccc---cCCCCCCchhHHHHHHHHHHHHHhCCCCCCC-------hH---------HHH-HHHHhCCCC
Q 032788           17 WHVSRWNSLTDQVVN---SKNGGYGLPADIWSVGCTVLEMLTRCRPYFG-------VE---------WAL-FKIARGELP   76 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~---~~~~~~~~~~diws~g~~~~~l~~~~~p~~~-------~~---------~~~-~~~~~~~~~   76 (133)
                      +-+|+..|||||++.   ++...|+.++|.||+|+++|.|+.|.+||.+       ++         ..+ ..++.+.+ 
T Consensus       245 tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkY-  323 (463)
T KOG0607|consen  245 TPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKY-  323 (463)
T ss_pred             CcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCC-
Confidence            449999999999875   3334589999999999999999999999964       11         222 34444544 


Q ss_pred             CCC----CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           77 PIP----DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        77 ~~~----~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      ..|    ..++.+.++++..++..++.+|.++.++++|||+..-
T Consensus       324 eFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~  367 (463)
T KOG0607|consen  324 EFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRC  367 (463)
T ss_pred             cCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCcccccc
Confidence            343    4578899999999999999999999999999999754

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.58  E-value=4.7e-15  Score=97.62  Aligned_cols=91  Identities=25%  Similarity=0.305  Sum_probs=70.5

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccC
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQVN   97 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   97 (133)
                      ..++..|++||....  ..++.++|+||+|+++|++++|..++........   .......+...+..+.+++.+|+..|
T Consensus       142 ~~~~~~y~aPE~~~~--~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~l~~d  216 (237)
T cd05576         142 EAVENMYCAPEVGGI--SEETEACDWWSLGAILFELLTGKTLVECHPSGIN---THTTLNIPEWVSEEARSLLQQLLQFN  216 (237)
T ss_pred             CCcCccccCCcccCC--CCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc---cccccCCcccCCHHHHHHHHHHccCC
Confidence            455677999999876  3478899999999999999999877654321111   11112345567889999999999999


Q ss_pred             CCCCCCH-----HHHhhCCCC
Q 032788           98 PNDRPTA-----AQLMEHPFV  113 (133)
Q Consensus        98 p~~R~s~-----~~~l~~~~~  113 (133)
                      |.+|+++     ++++.||||
T Consensus       217 p~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         217 PTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             HHHhcCCCccchHHHHcCCCC
Confidence            9999985     899999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.58  E-value=9.6e-15  Score=97.07  Aligned_cols=89  Identities=19%  Similarity=0.299  Sum_probs=71.3

Q ss_pred             cccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHccc
Q 032788           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQV   96 (133)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   96 (133)
                      ++..|++||....  ..++.++|+||+|+++|++++ |..||....  .....+..+.....+...+..+.+++.+||..
T Consensus       163 ~~~~y~~pe~~~~--~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  240 (256)
T cd05113         163 FPVRWSPPEVLLY--SKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRPHLASEKVYAIMYSCWHE  240 (256)
T ss_pred             cChhhCCHHHHhc--CcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCC
Confidence            4467999999976  448899999999999999998 888986543  33344444444445566788999999999999


Q ss_pred             CCCCCCCHHHHhhC
Q 032788           97 NPNDRPTAAQLMEH  110 (133)
Q Consensus        97 ~p~~R~s~~~~l~~  110 (133)
                      +|.+||++.+++.+
T Consensus       241 ~p~~Rp~~~~ll~~  254 (256)
T cd05113         241 KAEERPTFQQLLSS  254 (256)
T ss_pred             CcccCCCHHHHHHh
Confidence            99999999999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.58  E-value=2.2e-15  Score=108.64  Aligned_cols=87  Identities=22%  Similarity=0.458  Sum_probs=77.6

Q ss_pred             ccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccC
Q 032788           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQVN   97 (133)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   97 (133)
                      ...||+||.++.  ++++.++|+|=+|+++||++. |..||.+.+  +.+.++.++...+.|..+++.+..++.+||+++
T Consensus       555 PIKWmaPESINf--RrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~nCPp~LYslmskcWaye  632 (974)
T KOG4257|consen  555 PIKWMAPESINF--RRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPPNCPPALYSLMSKCWAYE  632 (974)
T ss_pred             ceeecCccccch--hcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCCCCChHHHHHHHHHhccC
Confidence            367999999998  669999999999999999855 999999875  677888889999999999999999999999999


Q ss_pred             CCCCCCHHHHhh
Q 032788           98 PNDRPTAAQLME  109 (133)
Q Consensus        98 p~~R~s~~~~l~  109 (133)
                      |.+||.+.++.+
T Consensus       633 P~kRPrftei~~  644 (974)
T KOG4257|consen  633 PSKRPRFTEIKA  644 (974)
T ss_pred             cccCCcHHHHHH
Confidence            999999876543

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.58  E-value=1.2e-14  Score=97.78  Aligned_cols=91  Identities=19%  Similarity=0.441  Sum_probs=72.6

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..++..|++||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+........+..++..+.+++..||
T Consensus       186 ~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  263 (283)
T cd05090         186 SLLPIRWMPPEAIMY--GKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLLPCSEDCPPRMYSLMTECW  263 (283)
T ss_pred             CCccceecChHHhcc--CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHc
Confidence            455677999999876  448899999999999999998 888886543  333444444444556678899999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032788           95 QVNPNDRPTAAQLMEH  110 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~  110 (133)
                      ..+|.+||++.+++++
T Consensus       264 ~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         264 QEGPSRRPRFKDIHTR  279 (283)
T ss_pred             ccCcccCcCHHHHHHH
Confidence            9999999999998865

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.58  E-value=7.2e-15  Score=103.26  Aligned_cols=108  Identities=24%  Similarity=0.351  Sum_probs=81.2

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC---------CC-----
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP---------IP-----   79 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~---------~~-----   79 (133)
                      +..+-|.+|.+||.+++. ..|+..+|+||+||++.||+.|++.|.+..  +++.++.+-+..+         +|     
T Consensus       277 T~rVvTLWYRpPELLLG~-t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~  355 (560)
T KOG0600|consen  277 TSRVVTLWYRPPELLLGA-TSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIF  355 (560)
T ss_pred             ccceEEeeccChHHhcCC-cccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCccccc
Confidence            345778999999999985 579999999999999999999999998876  3333332211110         11     


Q ss_pred             --------------CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCC--CCCCCCCCC
Q 032788           80 --------------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR--PLPTSWGLP  124 (133)
Q Consensus        80 --------------~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~--~~~~~~~~~  124 (133)
                                    ..++....+++..+|..||.+|.|+.++++++||..  ..+....||
T Consensus       356 kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p~~~~p~~Lp  416 (560)
T KOG0600|consen  356 KPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEPLPCDPSSLP  416 (560)
T ss_pred             CCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCCCCCCcccCC
Confidence                          124567889999999999999999999999999943  233444444

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.58  E-value=1.5e-14  Score=97.16  Aligned_cols=96  Identities=29%  Similarity=0.422  Sum_probs=69.7

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC------------------C
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL------------------P   76 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~------------------~   76 (133)
                      ...|+..|++||.+... ..++.++|+||+|++++++++|..+|....  ...........                  .
T Consensus       157 ~~~~~~~~~aPE~~~~~-~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (283)
T cd07830         157 DYVSTRWYRAPEILLRS-TSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGF  235 (283)
T ss_pred             CCCCcccccCceeeecC-cCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccc
Confidence            34678889999988653 347889999999999999999998885432  11111110000                  0


Q ss_pred             CC-----------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           77 PI-----------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        77 ~~-----------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                      ..           ....+..+.+++++||..+|.+||+++|++.|+||
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         236 RFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             cccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence            00           01125778999999999999999999999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.58  E-value=8.6e-15  Score=101.12  Aligned_cols=90  Identities=24%  Similarity=0.473  Sum_probs=70.7

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHH-HHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WAL-FKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      .++..|+|||++..  ..++.++|+||+||++|++++ |..||.+..  ..+ ..+..+.....+......+.+++.+||
T Consensus       236 ~~~~~y~aPE~~~~--~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl  313 (337)
T cd05054         236 RLPLKWMAPESIFD--KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCW  313 (337)
T ss_pred             CCCccccCcHHhcC--CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHc
Confidence            45678999999987  458999999999999999997 989986532  222 223333333445567789999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032788           95 QVNPNDRPTAAQLMEH  110 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~  110 (133)
                      ..+|.+||++++++++
T Consensus       314 ~~~p~~RPs~~ell~~  329 (337)
T cd05054         314 HNNPEDRPTFSELVEI  329 (337)
T ss_pred             cCChhhCcCHHHHHHH
Confidence            9999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.58  E-value=1.8e-14  Score=96.96  Aligned_cols=91  Identities=27%  Similarity=0.460  Sum_probs=71.8

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH-HH-HHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE-WA-LFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..|+..|++||.+..  ..++.++|+||+|+++|++++ |..||.+.. .. ...+..+.....+......+..++.+||
T Consensus       171 ~~~~~~y~~pE~~~~--~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~  248 (279)
T cd05111         171 HKTPIKWMALESILF--GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQPQICTIDVYMVMVKCW  248 (279)
T ss_pred             CCCcccccCHHHhcc--CCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCCCCCHHHHHHHHHHc
Confidence            456778999999986  458999999999999999997 998987654 22 2333444444445567788999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032788           95 QVNPNDRPTAAQLMEH  110 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~  110 (133)
                      ..+|.+||+++++++.
T Consensus       249 ~~~p~~Rps~~el~~~  264 (279)
T cd05111         249 MIDENVRPTFKELANE  264 (279)
T ss_pred             CCCcccCcCHHHHHHH
Confidence            9999999999998763

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.58  E-value=1.3e-14  Score=96.52  Aligned_cols=89  Identities=22%  Similarity=0.398  Sum_probs=69.8

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|++||.+..  ..++.++|+||+|+++|++++ |..||....  .....+......+.....+..+.+++.+|+.
T Consensus       165 ~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  242 (261)
T cd05072         165 KFPIKWTAPEAINF--GSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCPDELYDIMKTCWK  242 (261)
T ss_pred             ccceecCCHHHhcc--CCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcc
Confidence            45567999999876  447889999999999999998 889986543  2333333343344455678899999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032788           96 VNPNDRPTAAQLME  109 (133)
Q Consensus        96 ~~p~~R~s~~~~l~  109 (133)
                      .+|++||+++++.+
T Consensus       243 ~~p~~Rp~~~~i~~  256 (261)
T cd05072         243 EKAEERPTFDYLQS  256 (261)
T ss_pred             CCcccCcCHHHHHH
Confidence            99999999998864

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.58  E-value=7.4e-15  Score=97.96  Aligned_cols=96  Identities=33%  Similarity=0.556  Sum_probs=70.3

Q ss_pred             cccccccccccccccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCC-CCC---CCCCCCHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNS-KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGE-LPP---IPDSVSRDARDF   89 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~-~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~-~~~---~~~~~~~~~~~~   89 (133)
                      ...|+..|++||.+.. ....++.++|+||+|+++|++++|..|+....  .....+.... .+.   .....+..+.++
T Consensus       165 ~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  244 (267)
T cd06646         165 SFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNF  244 (267)
T ss_pred             ccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHH
Confidence            3468889999998853 11346789999999999999999999986443  1111111111 111   122457889999


Q ss_pred             HHHHcccCCCCCCCHHHHhhCCC
Q 032788           90 ILKCLQVNPNDRPTAAQLMEHPF  112 (133)
Q Consensus        90 ~~~~l~~~p~~R~s~~~~l~~~~  112 (133)
                      +.+||..+|.+||+++++++|+|
T Consensus       245 i~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         245 VKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             HHHHhhCChhhCcCHHHHhcCCC
Confidence            99999999999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.58  E-value=3e-15  Score=101.50  Aligned_cols=101  Identities=23%  Similarity=0.380  Sum_probs=83.2

Q ss_pred             hhhhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCh---------HHHHHHHHhCCCCCCCCCCC
Q 032788           13 LRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV---------EWALFKIARGELPPIPDSVS   83 (133)
Q Consensus        13 ~~~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~---------~~~~~~~~~~~~~~~~~~~~   83 (133)
                      -..+++|||+.|.|||++.+  ..|+..+|.|++|++++||+.|+.||.-.         ..-+..++.......|.+++
T Consensus       406 d~tstfcgtpnyiapeilrg--eeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprsls  483 (593)
T KOG0695|consen  406 DTTSTFCGTPNYIAPEILRG--EEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSLS  483 (593)
T ss_pred             cccccccCCCcccchhhhcc--cccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccceee
Confidence            34567899999999999998  56999999999999999999999999531         13344444444456788899


Q ss_pred             HHHHHHHHHHcccCCCCCC------CHHHHhhCCCCCC
Q 032788           84 RDARDFILKCLQVNPNDRP------TAAQLMEHPFVKR  115 (133)
Q Consensus        84 ~~~~~~~~~~l~~~p~~R~------s~~~~l~~~~~~~  115 (133)
                      -....++...++.||.+|.      -+.++..|+||+.
T Consensus       484 vkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~  521 (593)
T KOG0695|consen  484 VKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRS  521 (593)
T ss_pred             hhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhh
Confidence            8999999999999999995      3678999999984

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.58  E-value=3.8e-15  Score=102.60  Aligned_cols=98  Identities=24%  Similarity=0.431  Sum_probs=72.7

Q ss_pred             ccccccccccccccc---CCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCC----CCCCCCCCCHHHHH
Q 032788           18 HVSRWNSLTDQVVNS---KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGE----LPPIPDSVSRDARD   88 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~---~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~----~~~~~~~~~~~~~~   88 (133)
                      .+||+.|+|||++..   ....++.++|+||+|+++|++++|..||....  .....+....    .+.....++..+.+
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~  242 (332)
T cd05623         163 AVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKD  242 (332)
T ss_pred             cccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHH
Confidence            579999999999862   11347889999999999999999999997654  2333332221    11222356889999


Q ss_pred             HHHHHcccCC--CCCCCHHHHhhCCCCCC
Q 032788           89 FILKCLQVNP--NDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        89 ~~~~~l~~~p--~~R~s~~~~l~~~~~~~  115 (133)
                      ++.+|+..++  ..|++++++++|+||..
T Consensus       243 li~~ll~~~~~r~~r~~~~~~~~h~~f~~  271 (332)
T cd05623         243 LIRRLICSREHRLGQNGIEDFKQHPFFTG  271 (332)
T ss_pred             HHHHHccChhhhcCCCCHHHHhCCCCcCC
Confidence            9999886544  34689999999999975

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.57  E-value=1.6e-14  Score=96.09  Aligned_cols=89  Identities=25%  Similarity=0.460  Sum_probs=70.3

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|+|||....  ..++.++|+||+|+++|++++ |..||.+..  .....+..+...+.+...+..+.+++.+|+.
T Consensus       164 ~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  241 (260)
T cd05070         164 KFPIKWTAPEAALY--GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMLQCWK  241 (260)
T ss_pred             CCCccccChHHHhc--CCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcc
Confidence            34557999999876  447899999999999999998 888886643  3334444444445566778899999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032788           96 VNPNDRPTAAQLME  109 (133)
Q Consensus        96 ~~p~~R~s~~~~l~  109 (133)
                      .+|.+||+++++.+
T Consensus       242 ~~p~~Rpt~~~l~~  255 (260)
T cd05070         242 KDPEERPTFEYLQS  255 (260)
T ss_pred             cCcccCcCHHHHHH
Confidence            99999999998864

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.57  E-value=1.7e-14  Score=97.27  Aligned_cols=101  Identities=28%  Similarity=0.463  Sum_probs=76.7

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHHHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WALFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ..|+..|++||.+.......+.++|+|++|+++|++++|..||....     ..............+...+..+.+++.+
T Consensus       166 ~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  245 (288)
T cd05583         166 FCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKTMSAEARDFIQK  245 (288)
T ss_pred             ccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCCCCcccCHHHHHHHHH
Confidence            46888999999987632236789999999999999999999985321     1222222233345566788899999999


Q ss_pred             HcccCCCCCCC---HHHHhhCCCCCCCCC
Q 032788           93 CLQVNPNDRPT---AAQLMEHPFVKRPLP  118 (133)
Q Consensus        93 ~l~~~p~~R~s---~~~~l~~~~~~~~~~  118 (133)
                      ||..+|.+||+   +.++++|+|++....
T Consensus       246 ~l~~~p~~R~t~~~~~~~l~~~~~~~~~~  274 (288)
T cd05583         246 LLEKDPKKRLGANGADEIKNHPFFQGIDW  274 (288)
T ss_pred             HhcCCHhhccCcchHHHHhcCcccccCCH
Confidence            99999999998   467799999987544

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.57  E-value=1.6e-14  Score=96.42  Aligned_cols=91  Identities=21%  Similarity=0.361  Sum_probs=66.8

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHH-hCCCCCCChH-HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEML-TRCRPYFGVE-WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~-~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ..|+..|+|||.+... ..++.++|+||+|+++|+++ .|..|+.... ........... .........+.+++.+||.
T Consensus       168 ~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~  245 (262)
T cd05077         168 CVERIPWIAPECVEDS-KNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYEGQC-MLVTPSCKELADLMTHCMN  245 (262)
T ss_pred             ccccccccChhhhcCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHhcCc-cCCCCChHHHHHHHHHHcC
Confidence            4678889999988742 45789999999999999997 5777776543 22222222221 2223345788999999999


Q ss_pred             cCCCCCCCHHHHhhC
Q 032788           96 VNPNDRPTAAQLMEH  110 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~  110 (133)
                      .||.+||++.+++++
T Consensus       246 ~dp~~Rp~~~~il~~  260 (262)
T cd05077         246 YDPNQRPFFRAIMRD  260 (262)
T ss_pred             CChhhCcCHHHHHHh
Confidence            999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.57  E-value=1.2e-14  Score=97.38  Aligned_cols=91  Identities=23%  Similarity=0.423  Sum_probs=72.7

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..++..|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+...+..+.+++.+||
T Consensus       181 ~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  258 (277)
T cd05032         181 GLLPVRWMAPESLKD--GVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDLPENCPDKLLELMRMCW  258 (277)
T ss_pred             CCccccccCHHHHhc--CCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHc
Confidence            356778999999876  447889999999999999997 888886543  333333444445567778899999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032788           95 QVNPNDRPTAAQLMEH  110 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~  110 (133)
                      ..+|.+||++.++++.
T Consensus       259 ~~~p~~Rpt~~~l~~~  274 (277)
T cd05032         259 QYNPKMRPTFLEIVSS  274 (277)
T ss_pred             CCChhhCCCHHHHHHH
Confidence            9999999999999753

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.57  E-value=1.1e-14  Score=107.30  Aligned_cols=86  Identities=24%  Similarity=0.440  Sum_probs=75.1

Q ss_pred             cccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH---HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccC
Q 032788           22 WNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE---WALFKIARGELPPIPDSVSRDARDFILKCLQVN   97 (133)
Q Consensus        22 ~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   97 (133)
                      ..|||||.+..  ..|+.++|+||+|+++||+++ |..||.+..   .....+..+.....|..+..++.+++..||+.+
T Consensus       485 ~kWmApEsl~~--~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~  562 (609)
T KOG0200|consen  485 VKWMAPESLFD--RVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNAD  562 (609)
T ss_pred             eeecCHHHhcc--CcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCC
Confidence            35999999998  459999999999999999987 889998732   445577888888999999999999999999999


Q ss_pred             CCCCCCHHHHhh
Q 032788           98 PNDRPTAAQLME  109 (133)
Q Consensus        98 p~~R~s~~~~l~  109 (133)
                      |.+||++.++..
T Consensus       563 p~~RP~F~~~~~  574 (609)
T KOG0200|consen  563 PEDRPTFSECVE  574 (609)
T ss_pred             cccCCCHHHHHH
Confidence            999999988764

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.57  E-value=1.2e-14  Score=101.80  Aligned_cols=89  Identities=21%  Similarity=0.388  Sum_probs=69.4

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHH-HHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WAL-FKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      .++..|+|||++..  ..++.++|+||+|+++|++++ |..||....  ... .....+.....+...+.++.+++.+||
T Consensus       275 ~~~~~y~aPE~~~~--~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  352 (374)
T cd05106         275 RLPVKWMAPESIFD--CVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCW  352 (374)
T ss_pred             CCccceeCHHHhcC--CCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHc
Confidence            34567999999876  458999999999999999996 999986643  222 222333333445567899999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032788           95 QVNPNDRPTAAQLME  109 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~  109 (133)
                      ..+|.+||+++++++
T Consensus       353 ~~dp~~RPs~~~l~~  367 (374)
T cd05106         353 NLEPTERPTFSQISQ  367 (374)
T ss_pred             CCChhhCcCHHHHHH
Confidence            999999999999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.57  E-value=1.5e-14  Score=96.25  Aligned_cols=89  Identities=25%  Similarity=0.462  Sum_probs=71.5

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|++||.+..  ..++.++|+||+|+++|++++ |+.||.+..  .....+........+...+..+.+++.+|+.
T Consensus       164 ~~~~~y~~pe~~~~--~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  241 (260)
T cd05067         164 KFPIKWTAPEAINY--GTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPEELYELMRLCWK  241 (260)
T ss_pred             cccccccCHHHhcc--CCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcc
Confidence            45678999999876  447889999999999999998 999997544  3333444444445566778899999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032788           96 VNPNDRPTAAQLME  109 (133)
Q Consensus        96 ~~p~~R~s~~~~l~  109 (133)
                      .+|++||++++++.
T Consensus       242 ~~p~~Rp~~~~l~~  255 (260)
T cd05067         242 EKPEERPTFEYLRS  255 (260)
T ss_pred             CChhhCCCHHHHHH
Confidence            99999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.57  E-value=1.7e-14  Score=95.73  Aligned_cols=88  Identities=18%  Similarity=0.349  Sum_probs=70.8

Q ss_pred             ccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccC
Q 032788           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQVN   97 (133)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   97 (133)
                      +..|++||.+..  ..++.++|+||+|+++|++++ |..||....  .....+........+...+..+.+++.+||..+
T Consensus       164 ~~~y~~Pe~~~~--~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  241 (256)
T cd05059         164 PVKWAPPEVFDY--SRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEK  241 (256)
T ss_pred             CccccCHHHhcc--CCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCC
Confidence            346999999987  458899999999999999998 788886543  333444444444556678899999999999999


Q ss_pred             CCCCCCHHHHhhC
Q 032788           98 PNDRPTAAQLMEH  110 (133)
Q Consensus        98 p~~R~s~~~~l~~  110 (133)
                      |++||+++++++.
T Consensus       242 p~~Rpt~~~~l~~  254 (256)
T cd05059         242 PEDRPAFKKLLSQ  254 (256)
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.57  E-value=1.7e-14  Score=95.97  Aligned_cols=87  Identities=21%  Similarity=0.350  Sum_probs=70.6

Q ss_pred             ccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccC
Q 032788           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQVN   97 (133)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   97 (133)
                      +..|++||.+..  ..++.++|+||+|+++|++++ |..||....  .....+..+.....+...+.++.+++.+||..+
T Consensus       161 ~~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~  238 (257)
T cd05115         161 PLKWYAPECINF--RKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIYK  238 (257)
T ss_pred             CcccCCHHHHcc--CCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence            467999999886  347889999999999999986 899987644  333444445555566778899999999999999


Q ss_pred             CCCCCCHHHHhh
Q 032788           98 PNDRPTAAQLME  109 (133)
Q Consensus        98 p~~R~s~~~~l~  109 (133)
                      |.+||++.++.+
T Consensus       239 ~~~Rp~~~~i~~  250 (257)
T cd05115         239 WEDRPNFAKVEE  250 (257)
T ss_pred             hhhCcCHHHHHH
Confidence            999999999865

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.57  E-value=1.3e-14  Score=96.93  Aligned_cols=90  Identities=26%  Similarity=0.414  Sum_probs=72.0

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|++||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+...+..+.+++.+||.
T Consensus       176 ~~~~~~~~pe~~~~--~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  253 (273)
T cd05035         176 KMPVKWIAIESLAD--RVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPEDCLDELYDLMYSCWR  253 (273)
T ss_pred             cCCccccCHhhccc--CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcC
Confidence            34567999999876  448899999999999999998 888886644  3334444444555667788999999999999


Q ss_pred             cCCCCCCCHHHHhhC
Q 032788           96 VNPNDRPTAAQLMEH  110 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~  110 (133)
                      .||.+||++.+++++
T Consensus       254 ~~p~~Rp~~~e~~~~  268 (273)
T cd05035         254 ADPKDRPTFTKLREV  268 (273)
T ss_pred             CChhhCcCHHHHHHH
Confidence            999999999998764

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.57  E-value=2.1e-14  Score=95.43  Aligned_cols=90  Identities=21%  Similarity=0.388  Sum_probs=68.3

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHhC-CCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~-~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|+|||.+..  ..++.++|+||+|+++|+++++ .+||...+  .....+..+.....+...+..+.+++..||.
T Consensus       163 ~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  240 (262)
T cd05058         163 KLPVKWMALESLQT--QKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVMLSCWH  240 (262)
T ss_pred             cCCccccChhHhcc--CccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcC
Confidence            45668999999876  4488999999999999999984 55665433  2223333333344455678899999999999


Q ss_pred             cCCCCCCCHHHHhhC
Q 032788           96 VNPNDRPTAAQLMEH  110 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~  110 (133)
                      .+|.+||++.+++..
T Consensus       241 ~~p~~Rp~~~~il~~  255 (262)
T cd05058         241 PKPEMRPTFSELVSR  255 (262)
T ss_pred             CChhhCCCHHHHHHH
Confidence            999999999998763

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.57  E-value=1.8e-14  Score=96.80  Aligned_cols=89  Identities=19%  Similarity=0.362  Sum_probs=69.9

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|+|||.+..  ..++.++|+||+|+++|++++ |+.||...+  .....+........+..++..+.+++.+||.
T Consensus       180 ~~~~~y~apE~~~~--~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  257 (280)
T cd05043         180 NRPVKWMALESLVN--KEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRLAQPINCPDELFAVMACCWA  257 (280)
T ss_pred             CcchhccCHHHHhc--CCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcC
Confidence            45667999999976  448899999999999999998 999987644  2222333333334455678899999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032788           96 VNPNDRPTAAQLME  109 (133)
Q Consensus        96 ~~p~~R~s~~~~l~  109 (133)
                      .+|++||++.++++
T Consensus       258 ~~p~~Rps~~~~~~  271 (280)
T cd05043         258 LDPEERPSFSQLVQ  271 (280)
T ss_pred             CChhhCCCHHHHHH
Confidence            99999999999875

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.57  E-value=1.9e-14  Score=97.11  Aligned_cols=94  Identities=30%  Similarity=0.417  Sum_probs=68.2

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhCCCC-------------------
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELP-------------------   76 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~~~~-------------------   76 (133)
                      .++..|+|||.+... ..++.++|+||+|+++|++++|..||.+..   .....+......                   
T Consensus       164 ~~~~~~~aPE~~~~~-~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (291)
T cd07844         164 VVTLWYRPPDVLLGS-TEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYS  242 (291)
T ss_pred             ccccccCCcHHhhcC-cccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccccc
Confidence            567889999998652 347889999999999999999999986543   111111100000                   


Q ss_pred             -----CC-----CCCCC--HHHHHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           77 -----PI-----PDSVS--RDARDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        77 -----~~-----~~~~~--~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                           ..     .....  ..+.+++.+|+..+|.+||++.+++.|+||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         243 FPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             ccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence                 00     01223  677899999999999999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.56  E-value=1.6e-14  Score=96.90  Aligned_cols=95  Identities=29%  Similarity=0.462  Sum_probs=69.8

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC--------------------CC
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG--------------------EL   75 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~--------------------~~   75 (133)
                      ..++..|+|||.+... ..++.++|+|++|+++|++++|..||....  ..+..+...                    ..
T Consensus       158 ~~~~~~~~aPE~~~~~-~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (282)
T cd07829         158 EVVTLWYRAPEILLGS-KHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTF  236 (282)
T ss_pred             cccCcCcCChHHhcCC-cCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccc
Confidence            3556789999998763 257889999999999999999998886543  111111100                    00


Q ss_pred             CCC--------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCC
Q 032788           76 PPI--------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        76 ~~~--------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                      +..        ....+..+.+++..||..+|.+||++++++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         237 PKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             cccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence            000        11236789999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.56  E-value=2.2e-14  Score=95.35  Aligned_cols=89  Identities=26%  Similarity=0.486  Sum_probs=71.5

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|++||.+..  ..++.++|+|++|+++|++++ |..||....  .....+........+...+..+.+++.+||.
T Consensus       165 ~~~~~~~~PE~~~~--~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  242 (261)
T cd05148         165 KIPYKWTAPEAASH--GTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPAKCPQEIYKIMLECWA  242 (261)
T ss_pred             CCceEecCHHHHcc--CCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCCCCCCHHHHHHHHHHcC
Confidence            34567999999876  458889999999999999998 788886543  3344444444445567788999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032788           96 VNPNDRPTAAQLME  109 (133)
Q Consensus        96 ~~p~~R~s~~~~l~  109 (133)
                      .+|.+||++.++++
T Consensus       243 ~~p~~Rpt~~~l~~  256 (261)
T cd05148         243 AEPEDRPSFKALRE  256 (261)
T ss_pred             CCchhCcCHHHHHH
Confidence            99999999999875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.56  E-value=2.7e-14  Score=94.36  Aligned_cols=90  Identities=22%  Similarity=0.424  Sum_probs=70.6

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|++||.+..  ..++.++|+||+|+++|++++ |..||....  .....+..+.....+...+..+.+++.+|+.
T Consensus       155 ~~~~~y~aPE~~~~--~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  232 (250)
T cd05085         155 QIPIKWTAPEALNY--GRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVMQRCWD  232 (250)
T ss_pred             CCcccccCHHHhcc--CCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcc
Confidence            33567999999876  447889999999999999998 888886543  2233333344444556678999999999999


Q ss_pred             cCCCCCCCHHHHhhC
Q 032788           96 VNPNDRPTAAQLMEH  110 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~  110 (133)
                      .+|++||++.++++.
T Consensus       233 ~~p~~Rp~~~~l~~~  247 (250)
T cd05085         233 YKPENRPKFSELQKE  247 (250)
T ss_pred             cCcccCCCHHHHHHH
Confidence            999999999998753

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.56  E-value=2.7e-14  Score=95.35  Aligned_cols=92  Identities=27%  Similarity=0.481  Sum_probs=72.4

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCC-CCCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPD-SVSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   93 (133)
                      ...|+..|++||.+..  ..++.++|+||+|+++|++++|..||....  .....+......+.+. ..+..+.+++.+|
T Consensus       172 ~~~~~~~~~~Pe~~~~--~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  249 (269)
T cd08528         172 SVVGTILYSCPEIVKN--EPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGMYSEDVTDVITSC  249 (269)
T ss_pred             cccCcccCcChhhhcC--CCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCcccCCHHHHHHHHHH
Confidence            4578889999999987  458999999999999999999999987654  2233333333333232 5678999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032788           94 LQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~  110 (133)
                      |..||++||++.++.++
T Consensus       250 l~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         250 LTPDAEARPDIIQVSAM  266 (269)
T ss_pred             CCCCCccCCCHHHHHHH
Confidence            99999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.56  E-value=2.1e-14  Score=95.21  Aligned_cols=90  Identities=21%  Similarity=0.334  Sum_probs=70.4

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|++||.+..  ..++.++|+|++|+++|++++ |..||....  .....+..+.....+...+..+.+++.+||.
T Consensus       162 ~~~~~~~aPe~~~~--~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~  239 (256)
T cd05112         162 KFPVKWSSPEVFSF--SKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPRLASQSVYELMQHCWK  239 (256)
T ss_pred             ccchhhcCHhHhcc--CCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcc
Confidence            34567999999876  448889999999999999997 888886543  3333444333334455678899999999999


Q ss_pred             cCCCCCCCHHHHhhC
Q 032788           96 VNPNDRPTAAQLMEH  110 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~  110 (133)
                      .+|.+||+++++++.
T Consensus       240 ~~p~~Rp~~~~~l~~  254 (256)
T cd05112         240 ERPEDRPSFSLLLHQ  254 (256)
T ss_pred             cChhhCCCHHHHHHh
Confidence            999999999999864

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.56  E-value=2e-14  Score=95.89  Aligned_cols=87  Identities=20%  Similarity=0.403  Sum_probs=68.4

Q ss_pred             ccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccC
Q 032788           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQVN   97 (133)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   97 (133)
                      +..|++||.+..  ..++.++|+||+|+++|++++ |..||....  .....+......+.+...+..+.+++.+||..+
T Consensus       173 ~~~y~~PE~~~~--~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~  250 (268)
T cd05063         173 PIRWTAPEAIAY--RKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQD  250 (268)
T ss_pred             CceecCHHHhhc--CCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence            346999999987  448899999999999999987 999986543  333333333333445567889999999999999


Q ss_pred             CCCCCCHHHHhh
Q 032788           98 PNDRPTAAQLME  109 (133)
Q Consensus        98 p~~R~s~~~~l~  109 (133)
                      |++||+++++++
T Consensus       251 p~~Rp~~~~i~~  262 (268)
T cd05063         251 RARRPRFVDIVN  262 (268)
T ss_pred             cccCcCHHHHHH
Confidence            999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.56  E-value=1.4e-14  Score=100.30  Aligned_cols=100  Identities=27%  Similarity=0.331  Sum_probs=73.0

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC----------------------
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG----------------------   73 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~----------------------   73 (133)
                      ..|+..|+|||.+... ..++.++|+||+|+++|++++|..||...+  .....+...                      
T Consensus       177 ~~~~~~y~aPE~~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (345)
T cd07877         177 YVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ  255 (345)
T ss_pred             cccCCCccCHHHHhCc-cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHH
Confidence            4678899999988652 347889999999999999999999985432  111111000                      


Q ss_pred             ---CCCC-----CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           74 ---ELPP-----IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        74 ---~~~~-----~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                         ..+.     .....+..+.+++.+|+..+|.+|+++.+++.|+||.+...
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~  308 (345)
T cd07877         256 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD  308 (345)
T ss_pred             HhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCC
Confidence               0000     01134677899999999999999999999999999987544

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.56  E-value=2.8e-14  Score=95.11  Aligned_cols=92  Identities=26%  Similarity=0.577  Sum_probs=70.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH----HHHHHHHhCCCCCCC-CCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELPPIP-DSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~   91 (133)
                      ...|+..|++||.+..  ..++.++|+||+|+++|++++|..||....    .....+.....++.+ ...+..+.+++.
T Consensus       165 ~~~~~~~~~aPE~~~~--~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  242 (267)
T cd08228         165 SLVGTPYYMSPERIHE--NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVS  242 (267)
T ss_pred             cCCCCccccChhhhcc--CCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHH
Confidence            4578889999999987  347889999999999999999999986542    222333332332322 356788999999


Q ss_pred             HHcccCCCCCCCHHHHhhC
Q 032788           92 KCLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~  110 (133)
                      +||..+|++||+++++++.
T Consensus       243 ~cl~~~p~~Rp~~~~vl~~  261 (267)
T cd08228         243 MCIYPDPDQRPDIGYVHQI  261 (267)
T ss_pred             HHCCCCcccCcCHHHHHHH
Confidence            9999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.56  E-value=2.8e-14  Score=94.92  Aligned_cols=89  Identities=22%  Similarity=0.424  Sum_probs=70.1

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|++||....  ..++.++|+||+|+++|++++ |..||.+..  .....+........+...+..+.+++.+||.
T Consensus       164 ~~~~~y~~Pe~~~~--~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  241 (260)
T cd05069         164 KFPIKWTAPEAALY--GRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHELMKLCWK  241 (260)
T ss_pred             ccchhhCCHHHhcc--CCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHcc
Confidence            45567999998876  448899999999999999998 888887643  2333333333334456678899999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032788           96 VNPNDRPTAAQLME  109 (133)
Q Consensus        96 ~~p~~R~s~~~~l~  109 (133)
                      .+|.+||+++++++
T Consensus       242 ~~p~~Rp~~~~i~~  255 (260)
T cd05069         242 KDPDERPTFEYIQS  255 (260)
T ss_pred             CCcccCcCHHHHHH
Confidence            99999999998874

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.56  E-value=3.1e-14  Score=95.10  Aligned_cols=90  Identities=24%  Similarity=0.352  Sum_probs=71.2

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|++||....  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+...+..+.+++.+||.
T Consensus       175 ~~~~~~~~pe~~~~--~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  252 (272)
T cd05075         175 KMPVKWIAIESLAD--RVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWL  252 (272)
T ss_pred             cCCcccCCHHHccC--CCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcC
Confidence            45668999999887  448899999999999999998 788886543  2333344444444556678899999999999


Q ss_pred             cCCCCCCCHHHHhhC
Q 032788           96 VNPNDRPTAAQLMEH  110 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~  110 (133)
                      .+|.+||+++++++.
T Consensus       253 ~~p~~Rps~~~l~~~  267 (272)
T cd05075         253 LNPKDRPSFETLRCE  267 (272)
T ss_pred             CCcccCcCHHHHHHH
Confidence            999999999999764

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.56  E-value=2.6e-14  Score=95.39  Aligned_cols=89  Identities=21%  Similarity=0.438  Sum_probs=69.9

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|++||.+..  ..++.++|+||+|+++|++++ |..||....  .....+..+.....+...+..+.+++.+||.
T Consensus       174 ~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  251 (269)
T cd05044         174 LLPVRWMAPESLLD--GKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQKPENCPDKIYQLMTNCWA  251 (269)
T ss_pred             CCCccccCHHHHcc--CCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCccCCcccchHHHHHHHHHHcC
Confidence            44567999999876  458999999999999999997 888886543  2333333333344456678899999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032788           96 VNPNDRPTAAQLME  109 (133)
Q Consensus        96 ~~p~~R~s~~~~l~  109 (133)
                      .+|.+||++.++++
T Consensus       252 ~~p~~Rp~~~~i~~  265 (269)
T cd05044         252 QDPSERPTFDRIQE  265 (269)
T ss_pred             CCcccCCCHHHHHH
Confidence            99999999999875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.56  E-value=2.2e-14  Score=95.64  Aligned_cols=90  Identities=21%  Similarity=0.403  Sum_probs=71.0

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|++||.+..  ..++.++|+|++|+++|++++ |..||....  .....+......+.+...+..+.+++..||.
T Consensus       169 ~~~~~y~~Pe~~~~--~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  246 (266)
T cd05033         169 KIPIRWTAPEAIAY--RKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPPPMDCPSALYQLMLDCWQ  246 (266)
T ss_pred             CCCccccChhhhcc--CCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcC
Confidence            34567999999987  458899999999999999987 888886543  2333444443444556778999999999999


Q ss_pred             cCCCCCCCHHHHhhC
Q 032788           96 VNPNDRPTAAQLMEH  110 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~  110 (133)
                      .+|++||++++++++
T Consensus       247 ~~p~~Rp~~~ei~~~  261 (266)
T cd05033         247 KDRNERPTFSQIVST  261 (266)
T ss_pred             CCcccCcCHHHHHHH
Confidence            999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.56  E-value=1.5e-14  Score=99.66  Aligned_cols=98  Identities=26%  Similarity=0.441  Sum_probs=71.4

Q ss_pred             cccccccccccccccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCC-C---CCCCCCCCHHHHH
Q 032788           18 HVSRWNSLTDQVVNSK---NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGE-L---PPIPDSVSRDARD   88 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~---~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~-~---~~~~~~~~~~~~~   88 (133)
                      .+||+.|+|||++...   ...++.++|+||+|+++|++++|..||.+..  .....+.... .   +......+..+.+
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  242 (331)
T cd05597         163 AVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKD  242 (331)
T ss_pred             eeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHH
Confidence            4799999999998631   1346789999999999999999999997654  2222332211 1   1122346889999


Q ss_pred             HHHHHcccCC--CCCCCHHHHhhCCCCCC
Q 032788           89 FILKCLQVNP--NDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        89 ~~~~~l~~~p--~~R~s~~~~l~~~~~~~  115 (133)
                      ++.+|+..++  ..|+++++++.||||..
T Consensus       243 li~~ll~~~~~r~~r~~~~~~l~hp~~~~  271 (331)
T cd05597         243 LIRRLICSPETRLGRNGLQDFKDHPFFEG  271 (331)
T ss_pred             HHHHHccCcccccCCCCHHHHhcCCCCCC
Confidence            9999886543  34789999999999975

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.56  E-value=3.3e-14  Score=94.83  Aligned_cols=89  Identities=25%  Similarity=0.421  Sum_probs=69.3

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|++||....  ..++.++|+||+|+++|++++ |..||.+..  .....+........+...+..+.+++.+|+.
T Consensus       164 ~~~~~y~~PE~~~~--~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  241 (262)
T cd05071         164 KFPIKWTAPEAALY--GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWR  241 (262)
T ss_pred             cccceecCHhHhcc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCCccccCHHHHHHHHHHcc
Confidence            45567999999876  458999999999999999998 788886543  2333333333334455678899999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032788           96 VNPNDRPTAAQLME  109 (133)
Q Consensus        96 ~~p~~R~s~~~~l~  109 (133)
                      .+|.+||+++++++
T Consensus       242 ~~p~~Rp~~~~~~~  255 (262)
T cd05071         242 KEPEERPTFEYLQA  255 (262)
T ss_pred             CCcccCCCHHHHHH
Confidence            99999999998875

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.55  E-value=3.4e-14  Score=96.71  Aligned_cols=89  Identities=21%  Similarity=0.397  Sum_probs=69.3

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHH-HHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WAL-FKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      .++..|++||.+..  ..++.++|+||+|+++|++++ |..||....  ... .....+.....+...+..+.+++.+|+
T Consensus       204 ~~~~~y~aPE~~~~--~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  281 (302)
T cd05055         204 RLPVKWMAPESIFN--CVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCW  281 (302)
T ss_pred             CcccccCCHhhhcc--CCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHc
Confidence            45677999999877  447899999999999999997 888986543  222 222333333345567889999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032788           95 QVNPNDRPTAAQLME  109 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~  109 (133)
                      ..+|++||++.++++
T Consensus       282 ~~~p~~Rpt~~ell~  296 (302)
T cd05055         282 DADPLKRPTFKQIVQ  296 (302)
T ss_pred             CCCchhCcCHHHHHH
Confidence            999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.55  E-value=1.9e-14  Score=100.72  Aligned_cols=89  Identities=21%  Similarity=0.377  Sum_probs=69.7

Q ss_pred             cccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH---HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE---WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ++..|+|||.+..  ..++.++|+||+|+++|++++ |..||....   .....+..+.....+...+.++.+++..||.
T Consensus       278 ~~~~y~aPE~~~~--~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  355 (375)
T cd05104         278 LPVKWMAPESIFN--CVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWD  355 (375)
T ss_pred             CCcceeChhHhcC--CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHHHcc
Confidence            4457999999987  458999999999999999987 888886542   2223333343444455678899999999999


Q ss_pred             cCCCCCCCHHHHhhC
Q 032788           96 VNPNDRPTAAQLMEH  110 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~  110 (133)
                      .||.+||++.++++.
T Consensus       356 ~dP~~RPs~~eil~~  370 (375)
T cd05104         356 ADPLKRPTFKQIVQL  370 (375)
T ss_pred             CChhHCcCHHHHHHH
Confidence            999999999999864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.55  E-value=2.8e-14  Score=94.72  Aligned_cols=89  Identities=19%  Similarity=0.335  Sum_probs=70.5

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|++||.+..  ..++.++|+||+|+++|++++ |+.||....  .....+..+.....+...+..+.+++.+|+.
T Consensus       160 ~~~~~y~aPE~~~~--~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  237 (256)
T cd05082         160 KLPVKWTAPEALRE--KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWH  237 (256)
T ss_pred             ccceeecCHHHHcc--CCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhc
Confidence            44567999999877  458889999999999999997 888886543  2333344444444556788999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032788           96 VNPNDRPTAAQLME  109 (133)
Q Consensus        96 ~~p~~R~s~~~~l~  109 (133)
                      .+|.+||+++++++
T Consensus       238 ~~p~~Rpt~~~l~~  251 (256)
T cd05082         238 LDAATRPSFLQLRE  251 (256)
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999999875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.55  E-value=2.7e-14  Score=95.06  Aligned_cols=90  Identities=28%  Similarity=0.651  Sum_probs=71.2

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH----HHHHHHHhCCCCCCCC-CCCHHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELPPIPD-SVSRDARDFILK   92 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   92 (133)
                      ..|+..|++||.+.+  ..++.++|+||+|+++|++++|..||....    ........+.....+. ..+..+.+++..
T Consensus       166 ~~~~~~y~apE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  243 (267)
T cd08224         166 LVGTPYYMSPERIHE--NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSR  243 (267)
T ss_pred             ecCCccccCHHHhcc--CCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHH
Confidence            468888999999876  458899999999999999999999986543    2222333344444444 677889999999


Q ss_pred             HcccCCCCCCCHHHHhh
Q 032788           93 CLQVNPNDRPTAAQLME  109 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~  109 (133)
                      ||..+|++||++.++++
T Consensus       244 cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         244 CINPDPEKRPDISYVLQ  260 (267)
T ss_pred             HcCCCcccCCCHHHHHH
Confidence            99999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.55  E-value=5.4e-15  Score=103.38  Aligned_cols=100  Identities=21%  Similarity=0.296  Sum_probs=78.5

Q ss_pred             cccccccccccccccC--CCCCCchhHHHHHHHHHHHHHhCCCCCCChHHHHHHHHhCCC-------CCCCCCCCHHHHH
Q 032788           18 HVSRWNSLTDQVVNSK--NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGEL-------PPIPDSVSRDARD   88 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~--~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~   88 (133)
                      ..||.+|++||.+...  ....+.++|+||+||++|.++.|+.||.........+..+..       -+....++.+..+
T Consensus       640 gAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAka  719 (775)
T KOG1151|consen  640 GAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKA  719 (775)
T ss_pred             cCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHH
Confidence            4899999999998752  245788999999999999999999999886522222211111       1223467889999


Q ss_pred             HHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           89 FILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        89 ~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      |+++||++.-.+|.+..++.+||+|..++
T Consensus       720 FIRRCLaYRKeDR~DV~qLA~dpyllPh~  748 (775)
T KOG1151|consen  720 FIRRCLAYRKEDRIDVQQLACDPYLLPHI  748 (775)
T ss_pred             HHHHHHHhhhhhhhhHHHHccCccccchh
Confidence            99999999999999999999999997643

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.55  E-value=2.1e-14  Score=98.15  Aligned_cols=90  Identities=24%  Similarity=0.422  Sum_probs=70.8

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH-HH-HHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE-WA-LFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|++||.+..  ..++.++|+||+|+++|++++ |..||.+.. .. ......+.....+..++..+.+++..||.
T Consensus       172 ~~~~~y~apE~~~~--~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  249 (316)
T cd05108         172 KVPIKWMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM  249 (316)
T ss_pred             ccceeecChHHhcc--CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcc
Confidence            34567999999987  458999999999999999987 899987644 22 22333334444456678899999999999


Q ss_pred             cCCCCCCCHHHHhhC
Q 032788           96 VNPNDRPTAAQLMEH  110 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~  110 (133)
                      .+|.+||++.+++.+
T Consensus       250 ~~p~~Rps~~~l~~~  264 (316)
T cd05108         250 IDADSRPKFRELIIE  264 (316)
T ss_pred             CChhhCcCHHHHHHH
Confidence            999999999998875

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.55  E-value=2.8e-14  Score=97.15  Aligned_cols=89  Identities=24%  Similarity=0.384  Sum_probs=70.3

Q ss_pred             cccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHccc
Q 032788           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQV   96 (133)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   96 (133)
                      ++..|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+........+...+..+.+++.+||..
T Consensus       204 ~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  281 (307)
T cd05098         204 LPVKWMAPEALFD--RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHA  281 (307)
T ss_pred             CccceeChHHhcc--CCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHccc
Confidence            3467999999877  448899999999999999997 788886544  22333344444455667789999999999999


Q ss_pred             CCCCCCCHHHHhhC
Q 032788           97 NPNDRPTAAQLMEH  110 (133)
Q Consensus        97 ~p~~R~s~~~~l~~  110 (133)
                      +|++||++.+++++
T Consensus       282 ~p~~Rps~~evl~~  295 (307)
T cd05098         282 VPSQRPTFKQLVED  295 (307)
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999999764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.55  E-value=2.8e-14  Score=95.50  Aligned_cols=88  Identities=23%  Similarity=0.404  Sum_probs=69.4

Q ss_pred             cccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHccc
Q 032788           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQV   96 (133)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   96 (133)
                      .+..|++||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+...+..+.+++.+||..
T Consensus       173 ~~~~y~apE~~~~--~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  250 (270)
T cd05047         173 LPVRWMAIESLNY--SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWRE  250 (270)
T ss_pred             CccccCChHHHcc--CCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHccc
Confidence            3456999999876  448899999999999999996 889986543  23333433334445556778999999999999


Q ss_pred             CCCCCCCHHHHhh
Q 032788           97 NPNDRPTAAQLME  109 (133)
Q Consensus        97 ~p~~R~s~~~~l~  109 (133)
                      +|.+||+++++++
T Consensus       251 ~p~~Rps~~~il~  263 (270)
T cd05047         251 KPYERPSFAQILV  263 (270)
T ss_pred             ChhhCCCHHHHHH
Confidence            9999999999875

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.55  E-value=1.6e-14  Score=97.59  Aligned_cols=89  Identities=22%  Similarity=0.389  Sum_probs=70.9

Q ss_pred             cccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHccc
Q 032788           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQV   96 (133)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   96 (133)
                      ++..|++||.+..  ..++.++|+||+|+++|++++ |..||.+..  ........+.....+...+..+.+++.+||..
T Consensus       196 ~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  273 (293)
T cd05053         196 LPVKWMAPEALFD--RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHE  273 (293)
T ss_pred             CCccccCHHHhcc--CCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHccc
Confidence            4467999999876  448899999999999999987 888886654  33344444444455667788999999999999


Q ss_pred             CCCCCCCHHHHhhC
Q 032788           97 NPNDRPTAAQLMEH  110 (133)
Q Consensus        97 ~p~~R~s~~~~l~~  110 (133)
                      +|.+||+++++++.
T Consensus       274 ~p~~Rps~~eil~~  287 (293)
T cd05053         274 VPSQRPTFKQLVED  287 (293)
T ss_pred             CcccCcCHHHHHHH
Confidence            99999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.54  E-value=4.3e-14  Score=94.49  Aligned_cols=89  Identities=22%  Similarity=0.468  Sum_probs=71.5

Q ss_pred             cccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHccc
Q 032788           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQV   96 (133)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   96 (133)
                      ++..|++||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+...+..+.+++.+|+..
T Consensus       170 ~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  247 (270)
T cd05056         170 LPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAY  247 (270)
T ss_pred             ccccccChhhhcc--CCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCC
Confidence            3457999999876  448899999999999999875 999986654  33444555555556677889999999999999


Q ss_pred             CCCCCCCHHHHhhC
Q 032788           97 NPNDRPTAAQLMEH  110 (133)
Q Consensus        97 ~p~~R~s~~~~l~~  110 (133)
                      +|.+||++.+++..
T Consensus       248 ~P~~Rpt~~~~~~~  261 (270)
T cd05056         248 DPSKRPRFTELKAQ  261 (270)
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999998753

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.54  E-value=4.5e-14  Score=95.22  Aligned_cols=88  Identities=19%  Similarity=0.473  Sum_probs=69.3

Q ss_pred             cccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHccc
Q 032788           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQV   96 (133)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   96 (133)
                      ++..|++||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+...+..+.+++.+|+..
T Consensus       194 ~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  271 (288)
T cd05050         194 IPIRWMPPESIFY--NRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSK  271 (288)
T ss_pred             cChhhcCHHHHhc--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccc
Confidence            4556999999876  458999999999999999987 777876543  33344444444444566788999999999999


Q ss_pred             CCCCCCCHHHHhh
Q 032788           97 NPNDRPTAAQLME  109 (133)
Q Consensus        97 ~p~~R~s~~~~l~  109 (133)
                      +|.+||+++|+++
T Consensus       272 ~p~~Rpt~~el~~  284 (288)
T cd05050         272 LPSDRPSFASINR  284 (288)
T ss_pred             CcccCCCHHHHHH
Confidence            9999999999875

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.54  E-value=3.9e-14  Score=93.65  Aligned_cols=87  Identities=23%  Similarity=0.468  Sum_probs=68.5

Q ss_pred             ccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccC
Q 032788           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQVN   97 (133)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   97 (133)
                      +..|++||.+..  ..++.++|+||+|+++|++++ +..||....  .....+........+...+..+.+++.+|+..+
T Consensus       158 ~~~y~~PE~~~~--~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  235 (251)
T cd05041         158 PIKWTAPEALNY--GRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYD  235 (251)
T ss_pred             eeccCChHhhcc--CCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHhccC
Confidence            456999999876  448899999999999999998 788886544  222333333333446677889999999999999


Q ss_pred             CCCCCCHHHHhh
Q 032788           98 PNDRPTAAQLME  109 (133)
Q Consensus        98 p~~R~s~~~~l~  109 (133)
                      |.+||+++++++
T Consensus       236 p~~Rp~~~ell~  247 (251)
T cd05041         236 PENRPSFSEIYN  247 (251)
T ss_pred             hhhCcCHHHHHH
Confidence            999999999986

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.54  E-value=3.7e-14  Score=96.89  Aligned_cols=88  Identities=23%  Similarity=0.388  Sum_probs=69.6

Q ss_pred             cccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHccc
Q 032788           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQV   96 (133)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   96 (133)
                      ++..|++||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+...+..+.+++.+||..
T Consensus       198 ~~~~y~aPE~~~~--~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  275 (314)
T cd05099         198 LPVKWMAPEALFD--RVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHRMDKPSNCTHELYMLMRECWHA  275 (314)
T ss_pred             CCccccCHHHHcc--CCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCC
Confidence            3357999999876  458899999999999999998 888887654  23333344443445667788999999999999


Q ss_pred             CCCCCCCHHHHhh
Q 032788           97 NPNDRPTAAQLME  109 (133)
Q Consensus        97 ~p~~R~s~~~~l~  109 (133)
                      +|.+||++.++++
T Consensus       276 ~p~~Rps~~~ll~  288 (314)
T cd05099         276 VPTQRPTFKQLVE  288 (314)
T ss_pred             CcccCcCHHHHHH
Confidence            9999999998876

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.54  E-value=4.7e-14  Score=93.36  Aligned_cols=87  Identities=21%  Similarity=0.425  Sum_probs=67.7

Q ss_pred             ccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccC
Q 032788           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQVN   97 (133)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   97 (133)
                      +..|++||.+..  ..++.++|+||+|+++|++++ |..||....  .....+........+...+..+.+++.+|+..+
T Consensus       159 ~~~y~aPE~~~~--~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  236 (252)
T cd05084         159 PVKWTAPEALNY--GRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYD  236 (252)
T ss_pred             ceeecCchhhcC--CCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCC
Confidence            346999999877  448899999999999999987 888886433  222233333334456667889999999999999


Q ss_pred             CCCCCCHHHHhh
Q 032788           98 PNDRPTAAQLME  109 (133)
Q Consensus        98 p~~R~s~~~~l~  109 (133)
                      |.+||++.++++
T Consensus       237 p~~Rps~~~~~~  248 (252)
T cd05084         237 PGQRPSFSTVHQ  248 (252)
T ss_pred             hhhCcCHHHHHH
Confidence            999999999875

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.54  E-value=4.4e-14  Score=93.68  Aligned_cols=90  Identities=30%  Similarity=0.504  Sum_probs=69.7

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHH-hCCCCCCCCCCCHHHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIA-RGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ..++..|++||.+..  ..++.++|+||+|+++|++++ |..||....  .....+. .......+...+..+.+++..|
T Consensus       160 ~~~~~~y~~pE~~~~--~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  237 (257)
T cd05040         160 LKVPFAWCAPESLRT--RTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQC  237 (257)
T ss_pred             CCCCceecCHHHhcc--cCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHH
Confidence            356778999999887  348899999999999999998 999986543  2222222 2222334556788999999999


Q ss_pred             cccCCCCCCCHHHHhh
Q 032788           94 LQVNPNDRPTAAQLME  109 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~  109 (133)
                      +..+|.+||++.++++
T Consensus       238 l~~~p~~Rps~~~~~~  253 (257)
T cd05040         238 WAHNPADRPTFAALRE  253 (257)
T ss_pred             CCCCcccCCCHHHHHH
Confidence            9999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.54  E-value=4.7e-14  Score=94.76  Aligned_cols=88  Identities=24%  Similarity=0.434  Sum_probs=69.4

Q ss_pred             cccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH-H-HHHHHHhCCCCCCCCCCCHHHHHHHHHHccc
Q 032788           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE-W-ALFKIARGELPPIPDSVSRDARDFILKCLQV   96 (133)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   96 (133)
                      ++..|++||....  ..++.++|+||+|+++|++++ |..||.... . ....+..+.....+...+..+.+++..||..
T Consensus       173 ~~~~y~~PE~~~~--~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  250 (279)
T cd05109         173 VPIKWMALESILH--RRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDVYMIMVKCWMI  250 (279)
T ss_pred             cchhhCCHHHhcc--CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCccCCHHHHHHHHHHcCC
Confidence            4567999999977  458999999999999999987 888886543 2 2223333444445566788999999999999


Q ss_pred             CCCCCCCHHHHhh
Q 032788           97 NPNDRPTAAQLME  109 (133)
Q Consensus        97 ~p~~R~s~~~~l~  109 (133)
                      ||.+||++.+++.
T Consensus       251 dp~~Rp~~~~l~~  263 (279)
T cd05109         251 DSECRPRFRELVD  263 (279)
T ss_pred             ChhhCcCHHHHHH
Confidence            9999999999885

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.54  E-value=5.1e-14  Score=93.87  Aligned_cols=90  Identities=27%  Similarity=0.597  Sum_probs=69.2

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH----HHHHHHHhCCCCCC-CCCCCHHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELPPI-PDSVSRDARDFILK   92 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   92 (133)
                      ..|+..|++||.+..  ..++.++|+||+|+++|++++|..||.+..    .....+.....+.. +...+..+.+++.+
T Consensus       166 ~~~~~~~~ape~~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  243 (267)
T cd08229         166 LVGTPYYMSPERIHE--NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNM  243 (267)
T ss_pred             ccCCcCccCHHHhcC--CCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHH
Confidence            478889999999977  347889999999999999999999986543    11222222222222 23567899999999


Q ss_pred             HcccCCCCCCCHHHHhh
Q 032788           93 CLQVNPNDRPTAAQLME  109 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~  109 (133)
                      ||..+|.+||++.++++
T Consensus       244 ~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         244 CINPDPEKRPDITYVYD  260 (267)
T ss_pred             hcCCCcccCCCHHHHHH
Confidence            99999999999997764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.53  E-value=6.9e-14  Score=93.05  Aligned_cols=86  Identities=26%  Similarity=0.480  Sum_probs=68.4

Q ss_pred             cccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccCC
Q 032788           22 WNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQVNP   98 (133)
Q Consensus        22 ~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p   98 (133)
                      ..|++||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+........+...+..+.+++.+|+..+|
T Consensus       168 ~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  245 (261)
T cd05068         168 IKWTAPEAALY--NRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDP  245 (261)
T ss_pred             eeccCcccccc--CCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCc
Confidence            46999999877  458899999999999999998 898887644  2233333333334455678899999999999999


Q ss_pred             CCCCCHHHHhh
Q 032788           99 NDRPTAAQLME  109 (133)
Q Consensus        99 ~~R~s~~~~l~  109 (133)
                      .+||++.+++.
T Consensus       246 ~~Rp~~~~l~~  256 (261)
T cd05068         246 DDRPTFETLQW  256 (261)
T ss_pred             ccCCCHHHHHH
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.53  E-value=8.7e-15  Score=102.66  Aligned_cols=110  Identities=28%  Similarity=0.417  Sum_probs=80.8

Q ss_pred             hhchhhhh----hhhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCC--------hHHHHHHHHhC
Q 032788            6 VEGLGNAL----RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG--------VEWALFKIARG   73 (133)
Q Consensus         6 ~~~~~~~~----~~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~--------~~~~~~~~~~~   73 (133)
                      +.+|+++.    +.+..+-|..|.|||++.+  .+|+..+||||++|+.|||.+|...|..        ....+.++++-
T Consensus       395 IaDlGNACW~~khFT~DIQTRQYRapEVllG--sgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~EL  472 (590)
T KOG1290|consen  395 IADLGNACWVHKHFTEDIQTRQYRAPEVLLG--SGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMEL  472 (590)
T ss_pred             EeeccchhhhhhhhchhhhhhhccCcceeec--CCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHH
Confidence            44666654    4556688999999999999  5699999999999999999999877742        11333333221


Q ss_pred             CC--C-----------------------------C----------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCC
Q 032788           74 EL--P-----------------------------P----------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF  112 (133)
Q Consensus        74 ~~--~-----------------------------~----------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~  112 (133)
                      ..  +                             +          .+......+.+|+.-||..+|.+|+++.++++|||
T Consensus       473 LG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~hPw  552 (590)
T KOG1290|consen  473 LGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKHPW  552 (590)
T ss_pred             HhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcCcc
Confidence            10  0                             0          01112346889999999999999999999999999


Q ss_pred             CCCCC
Q 032788          113 VKRPL  117 (133)
Q Consensus       113 ~~~~~  117 (133)
                      +..-.
T Consensus       553 Ln~~~  557 (590)
T KOG1290|consen  553 LNPVA  557 (590)
T ss_pred             ccCCC
Confidence            98543

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.53  E-value=5.9e-14  Score=94.78  Aligned_cols=89  Identities=22%  Similarity=0.404  Sum_probs=70.8

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|++||.+..  ..++.++|+||+|+++|++++ |..||.+..  ..............+...+..+.+++..||.
T Consensus       190 ~~~~~y~apE~~~~--~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~  267 (290)
T cd05045         190 RIPVKWMAIESLFD--HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCSEEMYNLMLTCWK  267 (290)
T ss_pred             CCCccccCHHHHcc--CCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcc
Confidence            45668999998876  448899999999999999998 888887644  2233333344445566788999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032788           96 VNPNDRPTAAQLME  109 (133)
Q Consensus        96 ~~p~~R~s~~~~l~  109 (133)
                      .+|.+||++.++++
T Consensus       268 ~~P~~Rp~~~~i~~  281 (290)
T cd05045         268 QEPDKRPTFADISK  281 (290)
T ss_pred             CCcccCCCHHHHHH
Confidence            99999999999875

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.53  E-value=5.9e-14  Score=95.42  Aligned_cols=90  Identities=22%  Similarity=0.368  Sum_probs=70.7

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+...+..+.+++.+||.
T Consensus       200 ~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  277 (304)
T cd05101         200 RLPVKWMAPEALFD--RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWH  277 (304)
T ss_pred             CCCceeeCchhhcc--CCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcc
Confidence            44567999999876  458899999999999999987 777776543  3333444444444556678999999999999


Q ss_pred             cCCCCCCCHHHHhhC
Q 032788           96 VNPNDRPTAAQLMEH  110 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~  110 (133)
                      .+|.+||++.++++.
T Consensus       278 ~~p~~Rps~~e~l~~  292 (304)
T cd05101         278 AIPSHRPTFKQLVED  292 (304)
T ss_pred             cChhhCCCHHHHHHH
Confidence            999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.53  E-value=2.3e-14  Score=96.05  Aligned_cols=96  Identities=28%  Similarity=0.405  Sum_probs=71.2

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC--------------------
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL--------------------   75 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~--------------------   75 (133)
                      .+.|..|.|||++.+  ..|..++||||+||++-||..|+.-|.+.+  +++.++.+...                    
T Consensus       177 yVvtRyyrapevil~--~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~  254 (369)
T KOG0665|consen  177 YVVTRYYRAPEVILG--MGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVEN  254 (369)
T ss_pred             hhheeeccCchheec--cCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhc
Confidence            377889999999998  459999999999999999999987776533  22222211100                    


Q ss_pred             -C---------CCC-----------CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           76 -P---------PIP-----------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        76 -~---------~~~-----------~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                       +         ..|           .....-+.+++.+||..+|++|.+++++|.|||++-
T Consensus       255 ~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~v  315 (369)
T KOG0665|consen  255 RPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKV  315 (369)
T ss_pred             ChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeeee
Confidence             0         001           112345788999999999999999999999999983

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.53  E-value=6.1e-14  Score=102.70  Aligned_cols=103  Identities=14%  Similarity=0.045  Sum_probs=67.7

Q ss_pred             hccccccccccccccccCC--------------------CCCCchhHHHHHHHHHHHHHhCCCCCCChHHHHHHHHhCC-
Q 032788           16 KWHVSRWNSLTDQVVNSKN--------------------GGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGE-   74 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~--------------------~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~~~~~~~~-   74 (133)
                      +.++|++.|+|||.+....                    ..+..++||||+||++|+++.+..+.......+....... 
T Consensus       315 ~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~  394 (566)
T PLN03225        315 KEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRND  394 (566)
T ss_pred             cccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcC
Confidence            4568899999999764311                    0134467999999999999987655443221111111100 


Q ss_pred             ----------CCCC----------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           75 ----------LPPI----------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        75 ----------~~~~----------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                                ....          ........++++.+|+..||.+|++++++++||||.+...
T Consensus       395 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~  458 (566)
T PLN03225        395 YDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREGL  458 (566)
T ss_pred             CcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCc
Confidence                      0000          0112334568999999999999999999999999987544

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.53  E-value=6.3e-14  Score=95.05  Aligned_cols=88  Identities=16%  Similarity=0.160  Sum_probs=68.9

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HH---------HHHHHhCCCCCCCCCCCHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WA---------LFKIARGELPPIPDSVSRDA   86 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~---------~~~~~~~~~~~~~~~~~~~~   86 (133)
                      ..||+.|+|||...+  ..++.++|+||+|+++|++++|..||.+..  ..         ...+..+.  ......++.+
T Consensus       193 ~~gt~~y~ape~~~~--~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  268 (294)
T PHA02882        193 HRGTLYYAGLDAHNG--ACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGK--IKIKNANKFI  268 (294)
T ss_pred             cCCCccccCHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhh--hccCCCCHHH
Confidence            479999999999887  458999999999999999999999997652  11         11111111  1123457889


Q ss_pred             HHHHHHHcccCCCCCCCHHHHhh
Q 032788           87 RDFILKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        87 ~~~~~~~l~~~p~~R~s~~~~l~  109 (133)
                      .+++..|+..++.+||+.+++++
T Consensus       269 ~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        269 YDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             HHHHHHHHhCCCCCCCCHHHHHH
Confidence            99999999999999999999875

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.53  E-value=2.7e-14  Score=97.19  Aligned_cols=88  Identities=23%  Similarity=0.411  Sum_probs=69.0

Q ss_pred             ccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccC
Q 032788           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQVN   97 (133)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   97 (133)
                      +..|++||.+..  ..++.++|+||+|+++|++++ |..||.+..  ..............+...+..+.+++.+||..+
T Consensus       186 ~~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  263 (303)
T cd05088         186 PVRWMAIESLNY--SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREK  263 (303)
T ss_pred             cccccCHHHHhc--cCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCC
Confidence            456999998876  447889999999999999997 899986543  223333333333445567789999999999999


Q ss_pred             CCCCCCHHHHhhC
Q 032788           98 PNDRPTAAQLMEH  110 (133)
Q Consensus        98 p~~R~s~~~~l~~  110 (133)
                      |++||++++++++
T Consensus       264 p~~Rp~~~~il~~  276 (303)
T cd05088         264 PYERPSFAQILVS  276 (303)
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999998864

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.52  E-value=6.2e-14  Score=96.59  Aligned_cols=89  Identities=22%  Similarity=0.386  Sum_probs=70.5

Q ss_pred             cccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHccc
Q 032788           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQV   96 (133)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   96 (133)
                      ++..|++||++..  ..++.++|+||+|+++|++++ |..||.+..  .....+........+...+..+.+++.+||+.
T Consensus       198 ~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  275 (334)
T cd05100         198 LPVKWMAPEALFD--RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHA  275 (334)
T ss_pred             cCceEcCHHHhcc--CCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccc
Confidence            3457999999977  458899999999999999987 788886654  33333444444455666788999999999999


Q ss_pred             CCCCCCCHHHHhhC
Q 032788           97 NPNDRPTAAQLMEH  110 (133)
Q Consensus        97 ~p~~R~s~~~~l~~  110 (133)
                      +|.+||++.+++.+
T Consensus       276 ~p~~Rps~~ell~~  289 (334)
T cd05100         276 VPSQRPTFKQLVED  289 (334)
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999998875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.52  E-value=9.5e-14  Score=92.27  Aligned_cols=88  Identities=27%  Similarity=0.498  Sum_probs=70.4

Q ss_pred             cccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHccc
Q 032788           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQV   96 (133)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   96 (133)
                      ++..|++||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+...+..+.+++.+|+..
T Consensus       166 ~~~~y~~PE~~~~--~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  243 (261)
T cd05034         166 FPIKWTAPEAANY--GRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPPNCPEELYDLMLQCWDK  243 (261)
T ss_pred             CCccccCHHHhcc--CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccc
Confidence            3457999999986  447889999999999999998 899987643  34444444444445566788999999999999


Q ss_pred             CCCCCCCHHHHhh
Q 032788           97 NPNDRPTAAQLME  109 (133)
Q Consensus        97 ~p~~R~s~~~~l~  109 (133)
                      +|.+||+++++.+
T Consensus       244 ~p~~Rp~~~~l~~  256 (261)
T cd05034         244 DPEERPTFEYLQS  256 (261)
T ss_pred             CcccCCCHHHHHH
Confidence            9999999998874

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.52  E-value=4.6e-14  Score=97.65  Aligned_cols=99  Identities=27%  Similarity=0.358  Sum_probs=73.4

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH--HHHHHHhCCC--------------------
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGEL--------------------   75 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~--~~~~~~~~~~--------------------   75 (133)
                      ..++..|++||.+... ..++.++|+|++|+++|++++|..||.+.+.  ....+.....                    
T Consensus       175 ~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (343)
T cd07880         175 YVVTRWYRAPEVILNW-MHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVK  253 (343)
T ss_pred             cccCCcccCHHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHH
Confidence            4678889999998752 2478899999999999999999999975431  1111111000                    


Q ss_pred             --C--------CCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           76 --P--------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        76 --~--------~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                        +        ......+..+.+++.+|+..||.+|+++.+++.|+||+...
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~  305 (343)
T cd07880         254 KLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFH  305 (343)
T ss_pred             hccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhc
Confidence              0        01124566789999999999999999999999999998643

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.52  E-value=1.2e-13  Score=95.07  Aligned_cols=100  Identities=26%  Similarity=0.409  Sum_probs=72.7

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH--HHHHHH------------------------
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIA------------------------   71 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~--~~~~~~------------------------   71 (133)
                      ..++..|++||.+... ..++.++|+|++|+++|++++|..||.....  ....+.                        
T Consensus       165 ~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (328)
T cd07856         165 YVSTRYYRAPEIMLTW-QKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQ  243 (328)
T ss_pred             CcccccccCceeeecc-CCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHh
Confidence            4678889999987652 3478899999999999999999999864321  000000                        


Q ss_pred             hC-CCCCCC-----CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           72 RG-ELPPIP-----DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        72 ~~-~~~~~~-----~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      .. .....+     ...+..+.+++.+|+..+|.+|+++++++.|+|+.....
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~  296 (328)
T cd07856         244 SLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHD  296 (328)
T ss_pred             hccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccC
Confidence            00 000111     235678999999999999999999999999999975433

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.52  E-value=9e-14  Score=91.98  Aligned_cols=88  Identities=26%  Similarity=0.521  Sum_probs=70.9

Q ss_pred             cccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHccc
Q 032788           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQV   96 (133)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   96 (133)
                      ++..|++||.+..  ..++.++|+|++|+++|++++ |..||....  .....+........+...+..+.+++.+|+..
T Consensus       166 ~~~~y~~Pe~~~~--~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  243 (258)
T smart00219      166 LPIRWMAPESLKD--GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAE  243 (258)
T ss_pred             CcccccChHHhcc--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcC
Confidence            5678999999865  457899999999999999987 778876543  33444444555555666889999999999999


Q ss_pred             CCCCCCCHHHHhh
Q 032788           97 NPNDRPTAAQLME  109 (133)
Q Consensus        97 ~p~~R~s~~~~l~  109 (133)
                      +|.+||++.++++
T Consensus       244 ~p~~Rpt~~~ll~  256 (258)
T smart00219      244 DPEDRPTFSELVE  256 (258)
T ss_pred             ChhhCcCHHHHHh
Confidence            9999999999875

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.52  E-value=7.2e-14  Score=92.96  Aligned_cols=89  Identities=22%  Similarity=0.493  Sum_probs=70.0

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|++||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+...+..+.+++.+|+.
T Consensus       164 ~~~~~y~~PE~~~~--~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  241 (260)
T cd05073         164 KFPIKWTAPEAINF--GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWK  241 (260)
T ss_pred             cccccccCHhHhcc--CCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCcccCCHHHHHHHHHHcc
Confidence            34567999999986  447889999999999999998 888987654  2333334444444556778899999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032788           96 VNPNDRPTAAQLME  109 (133)
Q Consensus        96 ~~p~~R~s~~~~l~  109 (133)
                      .+|++||++.++++
T Consensus       242 ~~p~~Rp~~~~l~~  255 (260)
T cd05073         242 NRPEERPTFEYIQS  255 (260)
T ss_pred             cCcccCcCHHHHHH
Confidence            99999999998764

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.52  E-value=1.1e-14  Score=94.65  Aligned_cols=92  Identities=26%  Similarity=0.349  Sum_probs=66.8

Q ss_pred             ccccccccccccccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCChHHH-----HHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           19 VSRWNSLTDQVVNSKN-GGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA-----LFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~-~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ..|..|.|||.+..+. ...+.++||||+||++|+++.+..||...-..     +.....+...+...-.+..+.+++..
T Consensus       199 ~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~  278 (302)
T KOG2345|consen  199 RCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKS  278 (302)
T ss_pred             hCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHH
Confidence            5566799999998532 34578999999999999999999999643211     11111111112222377889999999


Q ss_pred             HcccCCCCCCCHHHHhhC
Q 032788           93 CLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~  110 (133)
                      |+..||.+||++.+++.+
T Consensus       279 mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  279 MLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             HhcCCcccCCCHHHHHHH
Confidence            999999999999998764

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.52  E-value=3.7e-15  Score=109.39  Aligned_cols=87  Identities=23%  Similarity=0.422  Sum_probs=78.7

Q ss_pred             cccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccCC
Q 032788           22 WNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQVNP   98 (133)
Q Consensus        22 ~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p   98 (133)
                      ..|.|||.+.+  ++++.++|+||+|+++||+++ |+.||.+..  +.+..+.++...+.|..++..+..++..||++|.
T Consensus       798 iRWTAPEAIa~--RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR  875 (996)
T KOG0196|consen  798 IRWTAPEAIAY--RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDR  875 (996)
T ss_pred             eeecChhHhhh--cccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHh
Confidence            57999999999  569999999999999999865 999998754  6788888899989999999999999999999999


Q ss_pred             CCCCCHHHHhhC
Q 032788           99 NDRPTAAQLMEH  110 (133)
Q Consensus        99 ~~R~s~~~~l~~  110 (133)
                      .+||.+.|++.+
T Consensus       876 ~~RP~F~qiV~~  887 (996)
T KOG0196|consen  876 NRRPKFAQIVST  887 (996)
T ss_pred             hcCCCHHHHHHH
Confidence            999999998874

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.51  E-value=3.2e-15  Score=110.00  Aligned_cols=98  Identities=20%  Similarity=0.277  Sum_probs=75.0

Q ss_pred             hhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChHHHHHHHHhCCCCCCCCCCCH--HHHHHHH
Q 032788           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFKIARGELPPIPDSVSR--DARDFIL   91 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~   91 (133)
                      ..+..||.+|+|||++...  .-..++||+|+||++|.+++ |..||.....+...+..+...-.....-.  +..++|.
T Consensus       671 ~s~~sGt~GW~APE~L~~~--~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L~~L~~~~d~eA~dLI~  748 (903)
T KOG1027|consen  671 LSGGSGTSGWQAPEQLRED--RKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTLVHLEPLPDCEAKDLIS  748 (903)
T ss_pred             ccCCCCcccccCHHHHhcc--ccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCccceeeeccCchHHHHHHHH
Confidence            4456999999999999984  35679999999999988766 58999876654444444433221111122  8899999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVK  114 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~  114 (133)
                      +|++.+|..||++.+++.||+|=
T Consensus       749 ~ml~~dP~~RPsa~~VL~HPlFW  771 (903)
T KOG1027|consen  749 RMLNPDPQLRPSATDVLNHPLFW  771 (903)
T ss_pred             HhcCCCcccCCCHHHHhCCCccC
Confidence            99999999999999999999883

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.51  E-value=9.4e-14  Score=93.30  Aligned_cols=91  Identities=21%  Similarity=0.365  Sum_probs=66.9

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHH-HhCCCCCCChH-HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEM-LTRCRPYFGVE-WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l-~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ..++..|++||.+... ..++.++|+||+|+++|++ ..|..||.... ......... ....+......+.+++.+||.
T Consensus       180 ~~~~~~~~aPe~~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~  257 (274)
T cd05076         180 RVERIPWIAPECVPGG-NSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYEK-KHRLPEPSCKELATLISQCLT  257 (274)
T ss_pred             cccCCcccCchhhcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHHh-ccCCCCCCChHHHHHHHHHcc
Confidence            3577889999988753 3478999999999999998 46888886543 111111111 112233455789999999999


Q ss_pred             cCCCCCCCHHHHhhC
Q 032788           96 VNPNDRPTAAQLMEH  110 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~  110 (133)
                      .+|.+||++.+++++
T Consensus       258 ~~p~~Rps~~~il~~  272 (274)
T cd05076         258 YEPTQRPSFRTILRD  272 (274)
T ss_pred             cChhhCcCHHHHHHh
Confidence            999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.51  E-value=8e-14  Score=98.41  Aligned_cols=91  Identities=23%  Similarity=0.394  Sum_probs=70.9

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH---HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE---WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ..++..|+|||.+..  ..++.++|+||+|+++|++++ |..||....   .....+..+.....+..++..+.+++..|
T Consensus       299 ~~~~~~y~aPE~~~~--~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  376 (400)
T cd05105         299 TFLPVKWMAPESIFD--NLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKC  376 (400)
T ss_pred             cCCCcceEChhhhcC--CCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHH
Confidence            356678999999977  448899999999999999986 888886532   22233344444445667788999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032788           94 LQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~  110 (133)
                      |..+|.+||++.++.+.
T Consensus       377 l~~dP~~RPt~~~l~~~  393 (400)
T cd05105         377 WNSEPEKRPSFLHLSDI  393 (400)
T ss_pred             CccCHhHCcCHHHHHHH
Confidence            99999999999988753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.51  E-value=7.1e-15  Score=108.70  Aligned_cols=101  Identities=31%  Similarity=0.597  Sum_probs=81.4

Q ss_pred             hhhcccccccccccccccc---CCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCC--CCCCCHHH
Q 032788           14 RRKWHVSRWNSLTDQVVNS---KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDA   86 (133)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~---~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~--~~~~~~~~   86 (133)
                      +.++++||+.|||||++..   ....|+..+|+||+|++..||-.|.+|+.+..  ..+..+..+..+.+  |...++.+
T Consensus       179 rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~F  258 (953)
T KOG0587|consen  179 RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKF  258 (953)
T ss_pred             cccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccchhhHHHHH
Confidence            4567899999999999974   12347889999999999999999999997765  33444433333222  45678899


Q ss_pred             HHHHHHHcccCCCCCCCHHHHhhCCCCC
Q 032788           87 RDFILKCLQVNPNDRPTAAQLMEHPFVK  114 (133)
Q Consensus        87 ~~~~~~~l~~~p~~R~s~~~~l~~~~~~  114 (133)
                      .+|+..|+..|-.+||+..++++|||..
T Consensus       259 ndFIs~cL~Kd~e~RP~~~~ll~hpFi~  286 (953)
T KOG0587|consen  259 NDFISTCLVKDYEQRPSTEELLKHPFIT  286 (953)
T ss_pred             HHHHHHHHhhccccCcchhhhccCCccc
Confidence            9999999999999999999999999987

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.51  E-value=9.4e-14  Score=92.74  Aligned_cols=87  Identities=22%  Similarity=0.430  Sum_probs=69.1

Q ss_pred             ccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccC
Q 032788           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQVN   97 (133)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   97 (133)
                      +..|++||.+..  ..++.++|+|++|+++|++++ |..||....  .....+......+.+...+..+.+++.+|+..+
T Consensus       172 ~~~y~~pe~~~~--~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  249 (267)
T cd05066         172 PIRWTAPEAIAY--RKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLPAPMDCPAALHQLMLDCWQKD  249 (267)
T ss_pred             ceeecCHhHhcc--CccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccC
Confidence            457999999987  448999999999999999876 999987643  333444444444445567889999999999999


Q ss_pred             CCCCCCHHHHhh
Q 032788           98 PNDRPTAAQLME  109 (133)
Q Consensus        98 p~~R~s~~~~l~  109 (133)
                      |.+||+++++++
T Consensus       250 p~~Rp~~~~i~~  261 (267)
T cd05066         250 RNERPKFEQIVS  261 (267)
T ss_pred             chhCCCHHHHHH
Confidence            999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.50  E-value=9.1e-14  Score=93.87  Aligned_cols=105  Identities=28%  Similarity=0.370  Sum_probs=78.5

Q ss_pred             hhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCC---C------------
Q 032788           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELP---P------------   77 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~---~------------   77 (133)
                      -++.++|.+|.|||++.+. ..|+..+|+||+||++.||.++..-|.+..  +.+.++..-...   .            
T Consensus       177 yt~evvTlWYRaPEvLlGs-~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k  255 (323)
T KOG0594|consen  177 YTPEVVTLWYRAPEVLLGS-TSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYK  255 (323)
T ss_pred             ccccEEEeeccCHHHhcCC-CcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCcccccccc
Confidence            3456899999999999985 459999999999999999999988887654  233333221110   0            


Q ss_pred             -----C--C-------CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCCCC
Q 032788           78 -----I--P-------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS  120 (133)
Q Consensus        78 -----~--~-------~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~~~  120 (133)
                           .  +       ........+++..|+..+|.+|.|++.++.|+||.......
T Consensus       256 ~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~~  312 (323)
T KOG0594|consen  256 APFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEKS  312 (323)
T ss_pred             ccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccch
Confidence                 0  0       01224788999999999999999999999999998764433

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.50  E-value=2e-13  Score=90.59  Aligned_cols=90  Identities=19%  Similarity=0.360  Sum_probs=70.1

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|++||.+..  ..++.++|+||+|+++|++++ |..||....  .....+........+...+..+.+++.+||.
T Consensus       160 ~~~~~~~ape~~~~--~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  237 (256)
T cd05039         160 KLPVKWTAPEALRE--KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWE  237 (256)
T ss_pred             CCcccccCchhhcC--CcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCccCCCHHHHHHHHHHhc
Confidence            34557999999876  447889999999999999987 888886554  2233333333444556678999999999999


Q ss_pred             cCCCCCCCHHHHhhC
Q 032788           96 VNPNDRPTAAQLMEH  110 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~  110 (133)
                      .+|.+||+++++++.
T Consensus       238 ~~p~~Rp~~~~l~~~  252 (256)
T cd05039         238 LDPAKRPTFKQLREQ  252 (256)
T ss_pred             cChhhCcCHHHHHHH
Confidence            999999999998763

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.50  E-value=1.6e-13  Score=93.31  Aligned_cols=90  Identities=22%  Similarity=0.419  Sum_probs=69.3

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH-H-HHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE-W-ALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|++||.+.+  ..++.++|+||+|+++|++++ |..||.+.. . ....+..+.....+...+..+.+++..||.
T Consensus       172 ~~~~~y~~PE~~~~--~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~  249 (303)
T cd05110         172 KMPIKWMALECIHY--RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWM  249 (303)
T ss_pred             ccccccCCHHHhcc--CCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcC
Confidence            45668999999876  458999999999999999987 888886643 2 222233333334455677889999999999


Q ss_pred             cCCCCCCCHHHHhhC
Q 032788           96 VNPNDRPTAAQLMEH  110 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~  110 (133)
                      .+|.+||+++++++.
T Consensus       250 ~~p~~Rp~~~~l~~~  264 (303)
T cd05110         250 IDADSRPKFKELAAE  264 (303)
T ss_pred             CChhhCcCHHHHHHH
Confidence            999999999998764

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.50  E-value=1.2e-14  Score=104.12  Aligned_cols=92  Identities=21%  Similarity=0.420  Sum_probs=71.9

Q ss_pred             cccccccccccccccC-CCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC----CCCCCCHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP----IPDSVSRDARDFI   90 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~-~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~~~~   90 (133)
                      --|+..|||||++..+ +..|+..+|||++|+|+|||++|..||....  .++..+..+...+    ....+++++++++
T Consensus       550 p~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll  629 (678)
T KOG0193|consen  550 PHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLL  629 (678)
T ss_pred             CccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhccCHHHHHHHH
Confidence            4778899999999853 3468999999999999999999999998443  3334443442222    1234567999999


Q ss_pred             HHHcccCCCCCCCHHHHhh
Q 032788           91 LKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~  109 (133)
                      ..||..++++||.+.+|+.
T Consensus       630 ~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  630 SDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             HHHHhcCcccCccHHHHHH
Confidence            9999999999999999987

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.50  E-value=1.2e-13  Score=92.26  Aligned_cols=87  Identities=21%  Similarity=0.401  Sum_probs=68.2

Q ss_pred             cccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccCC
Q 032788           22 WNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQVNP   98 (133)
Q Consensus        22 ~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p   98 (133)
                      ..|++||.+..  ..++.++|+||+|+++|++++ |..||....  .....+......+.+...+..+.+++..||..+|
T Consensus       175 ~~y~~PE~~~~--~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p  252 (269)
T cd05065         175 IRWTAPEAIAY--RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDR  252 (269)
T ss_pred             eeecCHhHhcc--CcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHcCCCh
Confidence            46999999986  458899999999999999875 888986543  2333333333334456678899999999999999


Q ss_pred             CCCCCHHHHhhC
Q 032788           99 NDRPTAAQLMEH  110 (133)
Q Consensus        99 ~~R~s~~~~l~~  110 (133)
                      ++||++++++..
T Consensus       253 ~~Rp~~~~i~~~  264 (269)
T cd05065         253 NARPKFGQIVST  264 (269)
T ss_pred             hhCcCHHHHHHH
Confidence            999999998753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.49  E-value=1.7e-13  Score=92.05  Aligned_cols=87  Identities=26%  Similarity=0.450  Sum_probs=69.6

Q ss_pred             ccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccC
Q 032788           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQVN   97 (133)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   97 (133)
                      +..|++||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+...+..+.+++.+||..+
T Consensus       174 ~~~y~~PE~~~~--~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  251 (279)
T cd05057         174 PIKWMALESILH--RIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQPPICTIDVYMVLVKCWMID  251 (279)
T ss_pred             cccccCHHHhhc--CCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence            457999999876  458899999999999999998 999987654  233344444444556667889999999999999


Q ss_pred             CCCCCCHHHHhh
Q 032788           98 PNDRPTAAQLME  109 (133)
Q Consensus        98 p~~R~s~~~~l~  109 (133)
                      |.+||++.++++
T Consensus       252 p~~Rp~~~~l~~  263 (279)
T cd05057         252 AESRPTFKELIN  263 (279)
T ss_pred             hhhCCCHHHHHH
Confidence            999999998765

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.49  E-value=3.3e-14  Score=97.97  Aligned_cols=98  Identities=23%  Similarity=0.398  Sum_probs=71.7

Q ss_pred             cccccccccccccccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC-CCCCCC---CCCCHHHHH
Q 032788           18 HVSRWNSLTDQVVNSK---NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG-ELPPIP---DSVSRDARD   88 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~---~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~-~~~~~~---~~~~~~~~~   88 (133)
                      .+||+.|+|||++...   ...++.++|+||+|+++|++++|..||...+  .....+... .....+   ..++..+.+
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~  242 (331)
T cd05624         163 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKD  242 (331)
T ss_pred             ccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHH
Confidence            5799999999998641   1236789999999999999999999997654  223333221 111222   346789999


Q ss_pred             HHHHHcccCCCC--CCCHHHHhhCCCCCC
Q 032788           89 FILKCLQVNPND--RPTAAQLMEHPFVKR  115 (133)
Q Consensus        89 ~~~~~l~~~p~~--R~s~~~~l~~~~~~~  115 (133)
                      ++.+|+..++++  |.+++++++|+||..
T Consensus       243 li~~ll~~~~~~~~~~~~~~~~~h~~f~~  271 (331)
T cd05624         243 LIQRLICSRERRLGQNGIEDFKKHAFFEG  271 (331)
T ss_pred             HHHHHccCchhhcCCCCHHHHhcCCCcCC
Confidence            999998765543  568999999999975

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.49  E-value=2e-13  Score=90.54  Aligned_cols=89  Identities=18%  Similarity=0.319  Sum_probs=69.4

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ..+..|++||.+..  ..++.++|+||+|+++|++++ |..||....  .....+..+.....+...+..+.+++.+||.
T Consensus       158 ~~~~~y~~pe~~~~--~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  235 (254)
T cd05083         158 KLPVKWTAPEALKH--KKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEPPEGCPADVYVLMTSCWE  235 (254)
T ss_pred             CCCceecCHHHhcc--CCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcC
Confidence            33457999999876  458899999999999999987 888886654  2223333343344456678899999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032788           96 VNPNDRPTAAQLME  109 (133)
Q Consensus        96 ~~p~~R~s~~~~l~  109 (133)
                      .+|.+||++.+++.
T Consensus       236 ~~p~~Rp~~~~l~~  249 (254)
T cd05083         236 TEPKKRPSFHKLRE  249 (254)
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.49  E-value=9.6e-14  Score=93.21  Aligned_cols=101  Identities=25%  Similarity=0.268  Sum_probs=74.8

Q ss_pred             hhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----------HHHHHHHhCCCC-------
Q 032788           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----------WALFKIARGELP-------   76 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----------~~~~~~~~~~~~-------   76 (133)
                      .+.++-|.+|.|||.+.+. ..|+.+.|+|++||++.|+++-.+.|.+..           .++.++.+-..-       
T Consensus       196 ~d~VVVTiWYRAPELLLGa-~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp  274 (438)
T KOG0666|consen  196 LDPVVVTIWYRAPELLLGA-RHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWP  274 (438)
T ss_pred             CCceEEEEEecChHHhccc-ccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccch
Confidence            4556889999999999985 679999999999999999999887776532           122222111110       


Q ss_pred             ------C-----------CC------------CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           77 ------P-----------IP------------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        77 ------~-----------~~------------~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                            .           ..            ..-++...+++.+++.+||.+|++++++++|+||...
T Consensus       275 ~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d  343 (438)
T KOG0666|consen  275 DLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTED  343 (438)
T ss_pred             hhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccC
Confidence                  0           00            1123347889999999999999999999999999765

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.49  E-value=1.9e-13  Score=96.59  Aligned_cols=91  Identities=22%  Similarity=0.319  Sum_probs=71.4

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHH-HHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WAL-FKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ..++..|++||.+..  ..++.++|+||+|+++|++++ |..||....  ... ..+..+.....+...+..+.+++.+|
T Consensus       301 ~~~~~~y~aPE~~~~--~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~c  378 (401)
T cd05107         301 TFLPLKWMAPESIFN--NLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKC  378 (401)
T ss_pred             cCCCCceeChHHhcC--CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHH
Confidence            356778999999986  448899999999999999997 788886533  222 23333444445666789999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032788           94 LQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~  110 (133)
                      |..+|..||++.+++..
T Consensus       379 l~~~P~~RPs~~ell~~  395 (401)
T cd05107         379 WEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             cCCChhHCcCHHHHHHH
Confidence            99999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.49  E-value=1.6e-13  Score=99.50  Aligned_cols=86  Identities=19%  Similarity=0.416  Sum_probs=75.2

Q ss_pred             cccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccCC
Q 032788           22 WNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQVNP   98 (133)
Q Consensus        22 ~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p   98 (133)
                      +.|.|||.+.++  .++.|+|+|++||++||+.+ |-.||-+.+  .....+.++.....|..++..+.++++.||+++|
T Consensus       430 IKWTAPEsLAyN--tFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsP  507 (1157)
T KOG4278|consen  430 IKWTAPESLAYN--TFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSP  507 (1157)
T ss_pred             ccccCccccccc--ccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccCCCCCCHHHHHHHHHHhcCCc
Confidence            579999999984  49999999999999999966 777887776  5566777888889999999999999999999999


Q ss_pred             CCCCCHHHHhh
Q 032788           99 NDRPTAAQLME  109 (133)
Q Consensus        99 ~~R~s~~~~l~  109 (133)
                      .+||++.++-+
T Consensus       508 sDRPsFaeiHq  518 (1157)
T KOG4278|consen  508 SDRPSFAEIHQ  518 (1157)
T ss_pred             ccCccHHHHHH
Confidence            99999987643

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.49  E-value=1.7e-13  Score=94.88  Aligned_cols=90  Identities=24%  Similarity=0.468  Sum_probs=70.1

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH---HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE---WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      .++..|++||.+..  ..++.++|+|++|+++|++++ |..||....   .....+..+.....+...+..+.+++..||
T Consensus       242 ~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl  319 (343)
T cd05103         242 RLPLKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCW  319 (343)
T ss_pred             CCCcceECcHHhcC--CCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHc
Confidence            34567999999876  448899999999999999986 888886543   222333344444445566788999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032788           95 QVNPNDRPTAAQLMEH  110 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~  110 (133)
                      ..+|.+||++.++++|
T Consensus       320 ~~~p~~Rps~~eil~~  335 (343)
T cd05103         320 HGEPSQRPTFSELVEH  335 (343)
T ss_pred             cCChhhCcCHHHHHHH
Confidence            9999999999999876

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.48  E-value=1e-13  Score=105.60  Aligned_cols=99  Identities=20%  Similarity=0.314  Sum_probs=75.5

Q ss_pred             hhhccccccccccccccccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhCCCCCC---CCCCCHHH
Q 032788           14 RRKWHVSRWNSLTDQVVNSKN-GGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELPPI---PDSVSRDA   86 (133)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~-~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~~~~~~---~~~~~~~~   86 (133)
                      ..+..+||..|+|||.+..-. ..|+.|+|+||+|++++||+..   |...-   ..+..++++..+..   .....+..
T Consensus       771 ~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yP---F~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e  847 (1351)
T KOG1035|consen  771 DLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYP---FGTSMERASILTNLRKGSIPEPADFFDPEHPEE  847 (1351)
T ss_pred             ccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhcc---CCchHHHHHHHHhcccCCCCCCcccccccchHH
Confidence            456679999999999998631 2599999999999999999864   55443   34444454444433   23344567


Q ss_pred             HHHHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           87 RDFILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        87 ~~~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      ..+++.++..||.+|||+.|+|.+.|+..
T Consensus       848 ~slI~~Ll~hdP~kRPtA~eLL~s~llpp  876 (1351)
T KOG1035|consen  848 ASLIRWLLSHDPSKRPTATELLNSELLPP  876 (1351)
T ss_pred             HHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence            88999999999999999999999988763

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.47  E-value=2e-13  Score=92.79  Aligned_cols=89  Identities=17%  Similarity=0.335  Sum_probs=65.3

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh--CCCCCCChH--HHHHHHH----h---CCCCCCCCCCCHHHH
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT--RCRPYFGVE--WALFKIA----R---GELPPIPDSVSRDAR   87 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~--~~~p~~~~~--~~~~~~~----~---~~~~~~~~~~~~~~~   87 (133)
                      .++..|+|||++..  ..++.++|+||+|+++|++++  +..||....  .......    .   ......+..++..+.
T Consensus       201 ~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (304)
T cd05096         201 VLPIRWMAWECILM--GKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLY  278 (304)
T ss_pred             CCCccccCHHHHhc--CCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHH
Confidence            45678999999876  448999999999999999876  566776532  1111111    1   111223446778999


Q ss_pred             HHHHHHcccCCCCCCCHHHHhh
Q 032788           88 DFILKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        88 ~~~~~~l~~~p~~R~s~~~~l~  109 (133)
                      +++.+||..+|.+||+++++.+
T Consensus       279 ~li~~cl~~~p~~RPs~~~i~~  300 (304)
T cd05096         279 ELMLQCWSRDCRERPSFSDIHA  300 (304)
T ss_pred             HHHHHHccCCchhCcCHHHHHH
Confidence            9999999999999999999864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.47  E-value=2.5e-13  Score=91.40  Aligned_cols=89  Identities=21%  Similarity=0.365  Sum_probs=66.6

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHHH-----------------HHHHhCCCCCCCCC
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWAL-----------------FKIARGELPPIPDS   81 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~-----------------~~~~~~~~~~~~~~   81 (133)
                      .++..|++||.+..  ..++.++|+||+|+++|++++|..|+.......                 ...........+..
T Consensus       171 ~~~~~~~~PE~~~~--~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (283)
T cd05080         171 DSPVFWYAVECLKE--NKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKN  248 (283)
T ss_pred             CCCceeeCHhHhcc--cCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCC
Confidence            45567999999876  447899999999999999999988875422100                 01111222233556


Q ss_pred             CCHHHHHHHHHHcccCCCCCCCHHHHhh
Q 032788           82 VSRDARDFILKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        82 ~~~~~~~~~~~~l~~~p~~R~s~~~~l~  109 (133)
                      .+..+.+++..||..+|.+||+++++++
T Consensus       249 ~~~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         249 CPQEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             CCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            7789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.46  E-value=1.6e-13  Score=100.24  Aligned_cols=88  Identities=28%  Similarity=0.490  Sum_probs=77.2

Q ss_pred             cccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccCC
Q 032788           22 WNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQVNP   98 (133)
Q Consensus        22 ~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p   98 (133)
                      ..|.|||.++.  ..++.++|+|.+||.+|||++ |..||.+..  .++..+..+.....|.-++.++.+++..||..+|
T Consensus       279 fAWCaPEsLrh--~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLpRPk~csedIY~imk~cWah~p  356 (1039)
T KOG0199|consen  279 FAWCAPESLRH--RKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNP  356 (1039)
T ss_pred             ccccCHhHhcc--ccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCCCCCCChHHHHHHHHHhccCCc
Confidence            46999999999  569999999999999999988 889998876  5666666777778888999999999999999999


Q ss_pred             CCCCCHHHHhhCC
Q 032788           99 NDRPTAAQLMEHP  111 (133)
Q Consensus        99 ~~R~s~~~~l~~~  111 (133)
                      .+||++..|.+..
T Consensus       357 aDRptFsair~~~  369 (1039)
T KOG0199|consen  357 ADRPTFSAIREDL  369 (1039)
T ss_pred             cccccHHHHHHhH
Confidence            9999999886543

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.46  E-value=4e-13  Score=89.83  Aligned_cols=90  Identities=23%  Similarity=0.410  Sum_probs=68.7

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH-HH-HHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE-WA-LFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|++||.+..  ..++.++|+||+|+++|++++ |..||.+.. .. ...+........+...+..+.+++.+|+.
T Consensus       176 ~~~~~~~~pe~~~~--~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~  253 (273)
T cd05074         176 KLPVKWLALESLAD--NVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQPPDCLEDVYELMCQCWS  253 (273)
T ss_pred             cCchhhcCHhHHhc--CccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcC
Confidence            34567899999876  347889999999999999988 788886554 22 22333333333445677899999999999


Q ss_pred             cCCCCCCCHHHHhhC
Q 032788           96 VNPNDRPTAAQLMEH  110 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~  110 (133)
                      .+|++||++.++++.
T Consensus       254 ~~p~~Rps~~~~~~~  268 (273)
T cd05074         254 PEPKCRPSFQHLRDQ  268 (273)
T ss_pred             CChhhCcCHHHHHHH
Confidence            999999999998763

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.46  E-value=1.4e-13  Score=104.37  Aligned_cols=104  Identities=28%  Similarity=0.389  Sum_probs=79.0

Q ss_pred             hhhcccccccccccccccc---CCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC-CCCCCC--CCCCHH
Q 032788           14 RRKWHVSRWNSLTDQVVNS---KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG-ELPPIP--DSVSRD   85 (133)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~---~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~-~~~~~~--~~~~~~   85 (133)
                      +++..+|||-|.+||++..   ..+.|+.-+|.||+||++|||+.|..||....  .-..++... ....+|  ..++.+
T Consensus       232 ~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSee  311 (1317)
T KOG0612|consen  232 RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEE  311 (1317)
T ss_pred             EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHH
Confidence            3445699999999999863   22568999999999999999999999998765  333344332 112334  568899


Q ss_pred             HHHHHHHHcccCCCCCCC---HHHHhhCCCCCCCCC
Q 032788           86 ARDFILKCLQVNPNDRPT---AAQLMEHPFVKRPLP  118 (133)
Q Consensus        86 ~~~~~~~~l~~~p~~R~s---~~~~l~~~~~~~~~~  118 (133)
                      ..++|.+++ -++..|..   ++++..||||.+.-+
T Consensus       312 akdLI~~ll-~~~e~RLgrngiedik~HpFF~g~~W  346 (1317)
T KOG0612|consen  312 AKDLIEALL-CDREVRLGRNGIEDIKNHPFFEGIDW  346 (1317)
T ss_pred             HHHHHHHHh-cChhhhcccccHHHHHhCccccCCCh
Confidence            999999865 55677776   999999999987554

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.45  E-value=9.4e-14  Score=102.45  Aligned_cols=89  Identities=24%  Similarity=0.373  Sum_probs=69.4

Q ss_pred             cccccccccccccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-HHHHHHHhCCCCCC-CCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNS-KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPI-PDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~-~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~   95 (133)
                      ..|+.|++||++.- .....+.|+|||+|||++|.|...+.||.+.. -.   |..+.+... ....+..++++|..||.
T Consensus       216 ~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la---Ilng~Y~~P~~p~ys~~l~~LI~~mL~  292 (738)
T KOG1989|consen  216 YTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA---ILNGNYSFPPFPNYSDRLKDLIRTMLQ  292 (738)
T ss_pred             hCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee---EEeccccCCCCccHHHHHHHHHHHHhc
Confidence            67899999999863 33457899999999999999999999997652 11   222333221 24578899999999999


Q ss_pred             cCCCCCCCHHHHhhC
Q 032788           96 VNPNDRPTAAQLMEH  110 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~  110 (133)
                      .+|++||++-|++..
T Consensus       293 ~nP~~RPnI~Qv~~~  307 (738)
T KOG1989|consen  293 PNPDERPNIYQVLEE  307 (738)
T ss_pred             cCcccCCCHHHHHHH
Confidence            999999999888764

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.44  E-value=5.1e-13  Score=90.33  Aligned_cols=90  Identities=23%  Similarity=0.390  Sum_probs=66.2

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh--CCCCCCChH--HHHHHHHhC-------CCCCCCCCCCHHHH
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT--RCRPYFGVE--WALFKIARG-------ELPPIPDSVSRDAR   87 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~--~~~p~~~~~--~~~~~~~~~-------~~~~~~~~~~~~~~   87 (133)
                      .++..|++||.+..  ..++.++|+||+|+++|++++  +..||....  ..+......       .....+...+.++.
T Consensus       193 ~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  270 (296)
T cd05051         193 PLPIRWMAWESVLL--GKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIY  270 (296)
T ss_pred             CCCceecCHHHhhc--CCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHH
Confidence            55678999999876  348899999999999999987  667775532  222222211       11122344568999


Q ss_pred             HHHHHHcccCCCCCCCHHHHhhC
Q 032788           88 DFILKCLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        88 ~~~~~~l~~~p~~R~s~~~~l~~  110 (133)
                      +++.+|+..+|.+||++.++++.
T Consensus       271 ~li~~cl~~~p~~Rpt~~el~~~  293 (296)
T cd05051         271 ELMLECWRRDEEDRPTFREIHLF  293 (296)
T ss_pred             HHHHHHhccChhcCCCHHHHHHH
Confidence            99999999999999999999753

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.44  E-value=7.9e-13  Score=87.62  Aligned_cols=90  Identities=19%  Similarity=0.335  Sum_probs=65.5

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH-H-HHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE-W-ALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..++..|++||.+......++.++|+||+|+++|++++ +..|+.... . ........  ...+......+.+++..||
T Consensus       164 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l  241 (259)
T cd05037         164 RVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQ--HRLPMPDCAELANLINQCW  241 (259)
T ss_pred             cccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcC--CCCCCCCchHHHHHHHHHh
Confidence            45677899999988632257899999999999999988 577775543 1 11111111  1222233478999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032788           95 QVNPNDRPTAAQLME  109 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~  109 (133)
                      ..+|++||++.++++
T Consensus       242 ~~~p~~Rpt~~~il~  256 (259)
T cd05037         242 TYDPTKRPSFRAILR  256 (259)
T ss_pred             ccChhhCCCHHHHHH
Confidence            999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.44  E-value=6e-13  Score=90.13  Aligned_cols=89  Identities=19%  Similarity=0.329  Sum_probs=65.5

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh--CCCCCCChH--HHHHHHH-------hCCCCCCCCCCCHHHH
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT--RCRPYFGVE--WALFKIA-------RGELPPIPDSVSRDAR   87 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~--~~~p~~~~~--~~~~~~~-------~~~~~~~~~~~~~~~~   87 (133)
                      .++..|+|||.+..  ..++.++|+||+|+++|++++  +..||....  .......       .......+...+..+.
T Consensus       192 ~~~~~y~aPE~~~~--~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  269 (295)
T cd05097         192 VLPIRWMAWESILL--GKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVF  269 (295)
T ss_pred             cCceeecChhhhcc--CCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHH
Confidence            44678999999876  448999999999999999987  566775432  1111111       1111223445678999


Q ss_pred             HHHHHHcccCCCCCCCHHHHhh
Q 032788           88 DFILKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        88 ~~~~~~l~~~p~~R~s~~~~l~  109 (133)
                      +++.+||..+|.+||++.++++
T Consensus       270 ~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         270 KLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             HHHHHHcCCCchhCcCHHHHHH
Confidence            9999999999999999999875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.43  E-value=5.2e-15  Score=105.19  Aligned_cols=99  Identities=26%  Similarity=0.349  Sum_probs=83.9

Q ss_pred             hhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHHHHHHHhCC---CCCCCCCCCHHHHHHHH
Q 032788           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGE---LPPIPDSVSRDARDFIL   91 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~   91 (133)
                      ..+++||+.|+|||++..  .+|...-|+||+|+++|--+.|..||....+....+++..   .+..+..++.+..++++
T Consensus       723 RrsVVGTPAYLaPEVLrn--kGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW~eis~~AidlIn  800 (888)
T KOG4236|consen  723 RRSVVGTPAYLAPEVLRN--KGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWSEISPEAIDLIN  800 (888)
T ss_pred             hhhhcCCccccCHHHHhh--ccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCCCchhhcCHHHHHHHH
Confidence            356799999999999998  4599999999999999999999999987765555454432   23445678899999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      .+++....+|.+..+.+.|+|+++
T Consensus       801 ~LLqVkm~kRysvdk~lsh~Wlq~  824 (888)
T KOG4236|consen  801 NLLQVKMRKRYSVDKSLSHPWLQD  824 (888)
T ss_pred             HHHHHHHHHhcchHhhccchhhhc
Confidence            999999999999999999999974

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.43  E-value=1.7e-14  Score=102.26  Aligned_cols=108  Identities=28%  Similarity=0.462  Sum_probs=76.6

Q ss_pred             hhchhhhhhhhc-----cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh--CCCC
Q 032788            6 VEGLGNALRRKW-----HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR--GELP   76 (133)
Q Consensus         6 ~~~~~~~~~~~~-----~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~--~~~~   76 (133)
                      +++||.+.....     .+-+..|.|||++.+  ..|+..-|+||+||++||+.+|+..|-+..  ..+...+.  +..+
T Consensus       578 LCDfGSA~~~~eneitPYLVSRFYRaPEIiLG--~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p  655 (752)
T KOG0670|consen  578 LCDFGSASFASENEITPYLVSRFYRAPEIILG--LPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFP  655 (752)
T ss_pred             eccCccccccccccccHHHHHHhccCcceeec--CcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCc
Confidence            456666654322     355567999999999  569999999999999999999998886532  22221111  1110


Q ss_pred             C------------------------------------------------------CCCC---CCHHHHHHHHHHcccCCC
Q 032788           77 P------------------------------------------------------IPDS---VSRDARDFILKCLQVNPN   99 (133)
Q Consensus        77 ~------------------------------------------------------~~~~---~~~~~~~~~~~~l~~~p~   99 (133)
                      .                                                      ++..   .-..+.+++..|+..||.
T Consensus       656 ~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~  735 (752)
T KOG0670|consen  656 NKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPE  735 (752)
T ss_pred             HHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChh
Confidence            0                                                      0100   113578899999999999


Q ss_pred             CCCCHHHHhhCCCCCC
Q 032788          100 DRPTAAQLMEHPFVKR  115 (133)
Q Consensus       100 ~R~s~~~~l~~~~~~~  115 (133)
                      +|.+..|+|+|||+..
T Consensus       736 KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  736 KRITVNQALKHPFITE  751 (752)
T ss_pred             hcCCHHHHhcCCcccC
Confidence            9999999999999864

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.42  E-value=1.9e-13  Score=89.60  Aligned_cols=104  Identities=28%  Similarity=0.384  Sum_probs=78.0

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC---------------------
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL---------------------   75 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~---------------------   75 (133)
                      +-|.+|.+||.+.+. ..|+.+.|+|..||++.+|+++.+.+.+..  ..+..+..-..                     
T Consensus       189 vvTLwYrppEllLG~-r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~  267 (376)
T KOG0669|consen  189 VVTLWYRPPELLLGD-REYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIEL  267 (376)
T ss_pred             eeeeecCCHHHhhcc-cccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccC
Confidence            558899999999984 679999999999999999999998887754  22222211111                     


Q ss_pred             CCC-------------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCCCCCCC
Q 032788           76 PPI-------------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGL  123 (133)
Q Consensus        76 ~~~-------------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~~~~~~  123 (133)
                      .++             |.....+..+++..++..||.+|+++.+++.|.||-+...++.++
T Consensus       268 ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~pqanl  328 (376)
T KOG0669|consen  268 EPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMPQANL  328 (376)
T ss_pred             CCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcchhhH
Confidence            001             111234778999999999999999999999999998776655444

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.42  E-value=8e-13  Score=89.56  Aligned_cols=89  Identities=21%  Similarity=0.409  Sum_probs=65.1

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh--CCCCCCChH--HHHHHH----H---hCCCCCCCCCCCHHHH
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT--RCRPYFGVE--WALFKI----A---RGELPPIPDSVSRDAR   87 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~--~~~p~~~~~--~~~~~~----~---~~~~~~~~~~~~~~~~   87 (133)
                      .++..|++||....  ..++.++|+||+|+++|++++  +..||....  ......    .   .....+.+..++..+.
T Consensus       193 ~~~~~~~~pe~~~~--~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (296)
T cd05095         193 VLPIRWMSWESILL--GKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLY  270 (296)
T ss_pred             cCccccCCHHHHhc--CCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHH
Confidence            33567999998776  458999999999999999987  677775432  111111    0   1111233455778999


Q ss_pred             HHHHHHcccCCCCCCCHHHHhh
Q 032788           88 DFILKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        88 ~~~~~~l~~~p~~R~s~~~~l~  109 (133)
                      +++..||..||.+||++.++.+
T Consensus       271 ~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         271 KLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             HHHHHHcCCCcccCCCHHHHHH
Confidence            9999999999999999999865

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.42  E-value=1.2e-12  Score=87.61  Aligned_cols=91  Identities=24%  Similarity=0.546  Sum_probs=69.0

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCC-CCCCCCCCCHHHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGE-LPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   93 (133)
                      ..++..|++||.+..  ..++.++|+||+|+++|++++ |..||....  ........+. ....+...+..+.+++.+|
T Consensus       178 ~~~~~~y~~PE~~~~--~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~  255 (275)
T cd05046         178 ALIPLRWLAPEAVQE--DDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRC  255 (275)
T ss_pred             ceeEEeecChhhhcc--CCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHH
Confidence            356677999999876  347889999999999999998 778886533  2223332222 1233456788999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032788           94 LQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~  110 (133)
                      |..+|.+||++.+++..
T Consensus       256 l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         256 WAVNPKDRPSFSELVSA  272 (275)
T ss_pred             cCCCcccCCCHHHHHHH
Confidence            99999999999999864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.42  E-value=6.8e-13  Score=89.40  Aligned_cols=92  Identities=22%  Similarity=0.352  Sum_probs=67.4

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCh-----------------HHHHHHHHhCCCCCCC
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-----------------EWALFKIARGELPPIP   79 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~-----------------~~~~~~~~~~~~~~~~   79 (133)
                      ...|+..|+|||.+..  ..++.++|+||+|+++|+++++..+....                 .........+...+.+
T Consensus       171 ~~~~~~~y~apE~~~~--~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (284)
T cd05079         171 DLDSPVFWYAPECLIQ--SKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRP  248 (284)
T ss_pred             CCCCCccccCHHHhcc--CCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCC
Confidence            3456678999999876  44788999999999999999865543211                 0111222223333445


Q ss_pred             CCCCHHHHHHHHHHcccCCCCCCCHHHHhhC
Q 032788           80 DSVSRDARDFILKCLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        80 ~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~  110 (133)
                      ...+..+.+++.+|+..+|.+||+++++++.
T Consensus       249 ~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         249 PNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             CCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            6678899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.41  E-value=1.5e-12  Score=87.07  Aligned_cols=91  Identities=19%  Similarity=0.343  Sum_probs=63.7

Q ss_pred             cccccccccccccccCC-----CCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCC-----CCCCCCCCH
Q 032788           18 HVSRWNSLTDQVVNSKN-----GGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGEL-----PPIPDSVSR   84 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~-----~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~-----~~~~~~~~~   84 (133)
                      ..|+..|+|||++....     ..++.++|+||+|+++|++++ |..||....  ...........     +......+.
T Consensus       162 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (269)
T cd05087         162 LWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSD  241 (269)
T ss_pred             cCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCCh
Confidence            35677899999986421     125779999999999999986 998986543  22222111111     112234567


Q ss_pred             HHHHHHHHHcccCCCCCCCHHHHhh
Q 032788           85 DARDFILKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        85 ~~~~~~~~~l~~~p~~R~s~~~~l~  109 (133)
                      .+.+++..|| .+|++||++++++.
T Consensus       242 ~~~~l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         242 RWYEVMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             HHHHHHHHHh-cCcccCCCHHHHHH
Confidence            8899999998 68999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.40  E-value=1.5e-12  Score=87.64  Aligned_cols=87  Identities=16%  Similarity=0.315  Sum_probs=63.5

Q ss_pred             ccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH-----------------HH-HHHHhCCCCCCCCCC
Q 032788           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-----------------AL-FKIARGELPPIPDSV   82 (133)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~-----------------~~-~~~~~~~~~~~~~~~   82 (133)
                      +..|++||....  ..++.++|+||+|+++|+++++..++.....                 .+ ...........+...
T Consensus       174 ~~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (284)
T cd05081         174 PIFWYAPESLTE--SKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGC  251 (284)
T ss_pred             ceEeeCHHHhcc--CCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCC
Confidence            345999999876  4488999999999999999987555432110                 01 112222222334567


Q ss_pred             CHHHHHHHHHHcccCCCCCCCHHHHhh
Q 032788           83 SRDARDFILKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        83 ~~~~~~~~~~~l~~~p~~R~s~~~~l~  109 (133)
                      +..+.+++.+||..+|.+||+++++++
T Consensus       252 ~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         252 PAEIYAIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.38  E-value=1.2e-12  Score=99.50  Aligned_cols=89  Identities=17%  Similarity=0.163  Sum_probs=65.5

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHH--HHHHHhCCC--CCCCCCCCHHHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA--LFKIARGEL--PPIPDSVSRDARDFILKC   93 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~   93 (133)
                      .+||+.|+|||.+.+  ..++.++|+||+|+++|++++|..||......  .........  ......++..+.+++.+|
T Consensus       191 ~vGT~~YmAPE~l~g--~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rc  268 (932)
T PRK13184        191 IVGTPDYMAPERLLG--VPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKA  268 (932)
T ss_pred             CCCCCCCCCHHHhcC--CCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHH
Confidence            579999999999987  45899999999999999999999999764311  111100110  011235678899999999


Q ss_pred             cccCCCCCCCHHHHh
Q 032788           94 LQVNPNDRPTAAQLM  108 (133)
Q Consensus        94 l~~~p~~R~s~~~~l  108 (133)
                      +..||.+|++..+.+
T Consensus       269 L~~DP~kR~ss~eeL  283 (932)
T PRK13184        269 LAVDPAERYSSVQEL  283 (932)
T ss_pred             ccCChhhCcCHHHHH
Confidence            999999998654433

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.38  E-value=1.8e-13  Score=97.94  Aligned_cols=102  Identities=25%  Similarity=0.372  Sum_probs=81.2

Q ss_pred             hhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-HHHH-HHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALF-KIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ..++||++.|.|||.+.+.. ..+..+|+|++|+++|.++.|..||.+.. ..+. +...+. ...+..++.++.+++.+
T Consensus       211 lqt~cgsppyAaPEl~~g~~-y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk-~rIp~~ms~dce~lLrk  288 (596)
T KOG0586|consen  211 LQTFCGSPPYAAPELFNGKK-YDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGK-YRIPFYMSCDCEDLLRK  288 (596)
T ss_pred             ccccCCCCCccChHhhcCcc-cCCcceehhhhhhhheeeeecccccCCcccccccchheeee-ecccceeechhHHHHHH
Confidence            35679999999999999843 23678999999999999999999998754 1221 122222 24577788899999999


Q ss_pred             HcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           93 CLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      ++..+|.+|.++++++.|.|......
T Consensus       289 ~lvl~Pskr~~~dqim~~~W~n~~~~  314 (596)
T KOG0586|consen  289 FLVLNPSKRGPCDQIMKDRWRNDLLE  314 (596)
T ss_pred             hhccCccccCCHHHhhhhcccchhhh
Confidence            99999999999999999999975443

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.38  E-value=3.8e-13  Score=103.81  Aligned_cols=91  Identities=16%  Similarity=0.229  Sum_probs=63.6

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH----H--HHHHHH-hC------CCCCCCC----
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----W--ALFKIA-RG------ELPPIPD----   80 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~----~--~~~~~~-~~------~~~~~~~----   80 (133)
                      ..||..|+|||.+..  ..++.++||||+|+++||+++|+.||....    .  ...... ..      ..+....    
T Consensus       838 ~~~t~~y~aPE~~~~--~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  915 (968)
T PLN00113        838 CFISSAYVAPETRET--KDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSV  915 (968)
T ss_pred             ccccccccCcccccC--CCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCc
Confidence            467889999999987  458999999999999999999999985321    0  000000 00      0011100    


Q ss_pred             --CCCHHHHHHHHHHcccCCCCCCCHHHHhhC
Q 032788           81 --SVSRDARDFILKCLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        81 --~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~  110 (133)
                        ....++.+++.+||..+|.+||+++|+++.
T Consensus       916 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        916 NQNEIVEVMNLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             cHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence              112356788899999999999999999864

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.36  E-value=4.8e-12  Score=84.53  Aligned_cols=91  Identities=24%  Similarity=0.395  Sum_probs=63.7

Q ss_pred             ccccccccccccccC-----CCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCC-----CCCCCCCCHH
Q 032788           19 VSRWNSLTDQVVNSK-----NGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGEL-----PPIPDSVSRD   85 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~-----~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~-----~~~~~~~~~~   85 (133)
                      .++..|+|||++...     ...++.++|+||+|+++|++++ |..||....  ..+........     +......+..
T Consensus       163 ~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (269)
T cd05042         163 AVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDR  242 (269)
T ss_pred             CCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHH
Confidence            456679999987531     1246789999999999999998 777876543  22222222221     1223356778


Q ss_pred             HHHHHHHHcccCCCCCCCHHHHhhC
Q 032788           86 ARDFILKCLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        86 ~~~~~~~~l~~~p~~R~s~~~~l~~  110 (133)
                      ...++..|| .||.+||+++++++.
T Consensus       243 ~~~~~~~~~-~dp~~Rpt~~~v~~~  266 (269)
T cd05042         243 WYEVMQFCW-LDPETRPTAEEVHEL  266 (269)
T ss_pred             HHHHHHHHh-cCcccccCHHHHHHH
Confidence            888999998 599999999998763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.36  E-value=2.3e-12  Score=86.49  Aligned_cols=88  Identities=26%  Similarity=0.428  Sum_probs=66.0

Q ss_pred             cccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH-----------------HHHHHHhCCCCCCCCCC
Q 032788           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-----------------ALFKIARGELPPIPDSV   82 (133)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~-----------------~~~~~~~~~~~~~~~~~   82 (133)
                      ++..|++||.+..  ..++.++|+||+|+++|++++|..|+.....                 ....+........+...
T Consensus       174 ~~~~~~~Pe~~~~--~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (284)
T cd05038         174 SPIFWYAPECLRT--SKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSC  251 (284)
T ss_pred             CcccccCcHHHcc--CCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccC
Confidence            3456999999876  4578899999999999999999888754321                 11112222223334566


Q ss_pred             CHHHHHHHHHHcccCCCCCCCHHHHhh
Q 032788           83 SRDARDFILKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        83 ~~~~~~~~~~~l~~~p~~R~s~~~~l~  109 (133)
                      +..+.+++.+||..+|.+||++.++++
T Consensus       252 ~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         252 PDEVYDLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             CHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            788999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.34  E-value=9.3e-12  Score=83.27  Aligned_cols=92  Identities=18%  Similarity=0.355  Sum_probs=63.9

Q ss_pred             ccccccccccccccccC-----CCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCC-----CCCCCCCC
Q 032788           17 WHVSRWNSLTDQVVNSK-----NGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGEL-----PPIPDSVS   83 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~-----~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~-----~~~~~~~~   83 (133)
                      ..+|+..|++||++...     ...++.++|+||+|+++|++++ +..||....  .....+.....     +.......
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (268)
T cd05086         160 DKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYS  239 (268)
T ss_pred             CCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCc
Confidence            34778899999987531     1235678999999999999986 566775433  22222222211     22234467


Q ss_pred             HHHHHHHHHHcccCCCCCCCHHHHhh
Q 032788           84 RDARDFILKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        84 ~~~~~~~~~~l~~~p~~R~s~~~~l~  109 (133)
                      ..+.+++..|| .+|++||+++++++
T Consensus       240 ~~~~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         240 ERWYEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             HHHHHHHHHHh-hCcccCCCHHHHHH
Confidence            78889999999 67999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.32  E-value=1e-12  Score=93.48  Aligned_cols=86  Identities=27%  Similarity=0.563  Sum_probs=72.7

Q ss_pred             cccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHH-HhCCCCCCCCCCCHHHHHHHHHHcccC
Q 032788           22 WNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKI-ARGELPPIPDSVSRDARDFILKCLQVN   97 (133)
Q Consensus        22 ~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~   97 (133)
                      ..|+|||.+..  ..|+.++|||++|+++||+++ |..||.+..  .....+ ..+.....+...+.....++..||..+
T Consensus       326 irWLAPEtl~~--~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~  403 (474)
T KOG0194|consen  326 IRWLAPETLNT--GIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKD  403 (474)
T ss_pred             ceecChhhhcc--CccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCC
Confidence            57999999998  459999999999999999988 677998865  444555 556666778888999999999999999


Q ss_pred             CCCCCCHHHHhh
Q 032788           98 PNDRPTAAQLME  109 (133)
Q Consensus        98 p~~R~s~~~~l~  109 (133)
                      |.+|+++.++.+
T Consensus       404 p~~R~tm~~i~~  415 (474)
T KOG0194|consen  404 PEDRPTMSTIKK  415 (474)
T ss_pred             hhhccCHHHHHH
Confidence            999999988754

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.28  E-value=4.3e-12  Score=92.27  Aligned_cols=96  Identities=28%  Similarity=0.404  Sum_probs=70.6

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHHHHHHhCCCCCCCCCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WALFKIARGELPPIPDSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (133)
                      ..+||+.|+|||++..  .+|+..+|.|++||++|+|+.|..||....     ..+..+.+......-..+++++.++|.
T Consensus       830 slvgt~nyiapevl~r--~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~  907 (1034)
T KOG0608|consen  830 SLVGTPNYIAPEVLAR--TGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQ  907 (1034)
T ss_pred             hhcCCCcccChHHhcc--cCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHH
Confidence            3599999999999998  569999999999999999999999997653     111122222222334567889999888


Q ss_pred             HHcccCCCCCC---CHHHHhhCCCCCC
Q 032788           92 KCLQVNPNDRP---TAAQLMEHPFVKR  115 (133)
Q Consensus        92 ~~l~~~p~~R~---s~~~~l~~~~~~~  115 (133)
                      ++. -+++.|.   -.+|+..||||+.
T Consensus       908 kLc-~sad~RLGkng~d~vKaHpfFkg  933 (1034)
T KOG0608|consen  908 KLC-CSADSRLGKNGADQVKAHPFFKG  933 (1034)
T ss_pred             HHh-cChhhhhcccchhhhhcCccccc
Confidence            654 2344453   4667999999985

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.24  E-value=6e-11  Score=85.87  Aligned_cols=98  Identities=13%  Similarity=0.067  Sum_probs=65.1

Q ss_pred             ccccccccccccccCCC------------------CC--CchhHHHHHHHHHHHHHhCCC-CCCChH---H-------HH
Q 032788           19 VSRWNSLTDQVVNSKNG------------------GY--GLPADIWSVGCTVLEMLTRCR-PYFGVE---W-------AL   67 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~------------------~~--~~~~diws~g~~~~~l~~~~~-p~~~~~---~-------~~   67 (133)
                      .+++.|++||.+.....                  .|  ..+.|+||+||++|+|+.+.. |+....   .       ..
T Consensus       371 ~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~  450 (507)
T PLN03224        371 MLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDL  450 (507)
T ss_pred             CCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchH
Confidence            34788999998763110                  01  124799999999999998764 554321   0       11


Q ss_pred             HHH---HhC-CCCCCCCCCCHHHHHHHHHHcccCC---CCCCCHHHHhhCCCCCCC
Q 032788           68 FKI---ARG-ELPPIPDSVSRDARDFILKCLQVNP---NDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        68 ~~~---~~~-~~~~~~~~~~~~~~~~~~~~l~~~p---~~R~s~~~~l~~~~~~~~  116 (133)
                      ..+   ... .........+...++++.+++..++   .+|+|++|+++||||...
T Consensus       451 ~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~~  506 (507)
T PLN03224        451 NRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLPE  506 (507)
T ss_pred             HHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCCC
Confidence            111   111 1112234567889999999999766   689999999999999643

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.21  E-value=2.4e-11  Score=92.20  Aligned_cols=107  Identities=28%  Similarity=0.501  Sum_probs=83.2

Q ss_pred             hchhhhhhhhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-HHHH-HHHhC--CCCCCCCCC
Q 032788            7 EGLGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALF-KIARG--ELPPIPDSV   82 (133)
Q Consensus         7 ~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-~~~~-~~~~~--~~~~~~~~~   82 (133)
                      +.+++.+..+.+|||+.|+|||++.-+  +|+..+|.|++|+++|+.+.|..||++.. +.+. .+...  ..++--...
T Consensus       207 ~k~t~Ef~dKqvcgTPeyiaPeVilrq--gygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~  284 (1205)
T KOG0606|consen  207 EKDTHEFQDKQVCGTPEYIAPEVILRQ--GYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEAL  284 (1205)
T ss_pred             HHHHHHhhhccccCCccccChhhhhhh--ccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCC
Confidence            346666677788999999999999974  49999999999999999999999998874 3332 22221  112223356


Q ss_pred             CHHHHHHHHHHcccCCCCCC---CHHHHhhCCCCCC
Q 032788           83 SRDARDFILKCLQVNPNDRP---TAAQLMEHPFVKR  115 (133)
Q Consensus        83 ~~~~~~~~~~~l~~~p~~R~---s~~~~l~~~~~~~  115 (133)
                      +.+..+++..++..+|..|.   ..-++.+|.||..
T Consensus       285 p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~  320 (1205)
T KOG0606|consen  285 PPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQL  320 (1205)
T ss_pred             CHHHHHHHHHHHHhChHhhcccchhhhhhhccceee
Confidence            78999999999999999984   4567889999975

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.20  E-value=1.9e-11  Score=89.05  Aligned_cols=103  Identities=32%  Similarity=0.588  Sum_probs=77.8

Q ss_pred             hhhcccccccccccccccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC-CCC---CCCCCHHH
Q 032788           14 RRKWHVSRWNSLTDQVVNS-KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL-PPI---PDSVSRDA   86 (133)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~-~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~-~~~---~~~~~~~~   86 (133)
                      ..+.+.||++|||||+... ..++|...+|+|++|+...|+..-.+|.....  ..+....+... ++.   +......+
T Consensus       168 KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~f  247 (829)
T KOG0576|consen  168 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFF  247 (829)
T ss_pred             hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHH
Confidence            4567899999999999753 33669999999999999888877666655443  33333222222 211   34567889


Q ss_pred             HHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           87 RDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        87 ~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      .+|++.++-.+|.+||+++.++.|+|+...
T Consensus       248 h~fvK~altknpKkRptaeklL~h~fvs~~  277 (829)
T KOG0576|consen  248 HNFVKGALTKNPKKRPTAEKLLQHPFVSQT  277 (829)
T ss_pred             HHHHHHHhcCCCccCCChhhheeceeeccc
Confidence            999999999999999999999999998754

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.19  E-value=1.2e-11  Score=85.38  Aligned_cols=97  Identities=30%  Similarity=0.432  Sum_probs=70.0

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHH--------------HhCC--CC--
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKI--------------ARGE--LP--   76 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~--------------~~~~--~~--   76 (133)
                      ..||++|.|||++..- ..-+.++|+||.|+++.-++++..||....   ..+.++              ..+.  ..  
T Consensus       237 rAGT~GfRaPEvL~k~-~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~k  315 (418)
T KOG1167|consen  237 RAGTPGFRAPEVLFRC-PRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQK  315 (418)
T ss_pred             cCCCCCCCchHHHhhc-cCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeecc
Confidence            4999999999998762 345789999999999999999999985321   000000              0000  00  


Q ss_pred             ------------------------CC--------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           77 ------------------------PI--------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        77 ------------------------~~--------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                                              ..        ....+..+.+++.+|+..||.+|++++++|+||||..
T Consensus       316 sn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~  386 (418)
T KOG1167|consen  316 SNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE  386 (418)
T ss_pred             ccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence                                    00        0122346889999999999999999999999999974

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.18  E-value=4.4e-11  Score=86.23  Aligned_cols=90  Identities=20%  Similarity=0.358  Sum_probs=68.2

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh--CCCCCCChH-HH----HHHHHhC----CCCCCCCCCCHHHH
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT--RCRPYFGVE-WA----LFKIARG----ELPPIPDSVSRDAR   87 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~--~~~p~~~~~-~~----~~~~~~~----~~~~~~~~~~~~~~   87 (133)
                      +-...|||+|.+..  ++++.++|+|++|+.+||++.  +..||.... ++    .......    .....|..++..+.
T Consensus       700 vlpiRwmawEsill--gkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~ly  777 (807)
T KOG1094|consen  700 VLPIRWMAWESILL--GKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLY  777 (807)
T ss_pred             eeeeeehhHHHHHh--ccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHH
Confidence            33468999999998  559999999999999999854  778886543 11    1111111    12345778899999


Q ss_pred             HHHHHHcccCCCCCCCHHHHhhC
Q 032788           88 DFILKCLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        88 ~~~~~~l~~~p~~R~s~~~~l~~  110 (133)
                      +++.+||..+..+||+++++-.+
T Consensus       778 elml~Cw~~es~~RPsFe~lh~~  800 (807)
T KOG1094|consen  778 ELMLRCWRRESEQRPSFEQLHLF  800 (807)
T ss_pred             HHHHHHhchhhhcCCCHHHHHHH
Confidence            99999999999999999988543

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.17  E-value=3.1e-11  Score=80.26  Aligned_cols=101  Identities=23%  Similarity=0.328  Sum_probs=72.2

Q ss_pred             hhhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCC-----------------
Q 032788           14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGE-----------------   74 (133)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~-----------------   74 (133)
                      +-+..+-|-+|.|||.+-+. +.|+..+||||+||++-|++.++..|....  +++..+..-.                 
T Consensus       213 hMTqEVVTQYYRAPEiLMGa-RhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~  291 (449)
T KOG0664|consen  213 NMTHEVVTQYYRAPELLMGA-RRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKN  291 (449)
T ss_pred             hhHHHHHHHHhccHHHhhcc-hhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHH
Confidence            44455778899999999875 679999999999999999999888886532  2222221100                 


Q ss_pred             -----CCCC-----------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           75 -----LPPI-----------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        75 -----~~~~-----------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                           ....           +.....+...++..++..||+.|.+.++.+.|++...
T Consensus       292 H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e  348 (449)
T KOG0664|consen  292 HVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEE  348 (449)
T ss_pred             HhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccc
Confidence                 0111           1122345667778899999999999999999998764

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.17  E-value=7.2e-11  Score=88.00  Aligned_cols=87  Identities=25%  Similarity=0.446  Sum_probs=73.9

Q ss_pred             ccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccC
Q 032788           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQVN   97 (133)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   97 (133)
                      .+.|||-|.+..  ..|+..+|||++||.+||+++ |-.|+.+..  ++-..+..+.....|..++-++.-++.+||..|
T Consensus       863 pikwmale~i~~--~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geRLsqPpiCtiDVy~~mvkCwmid  940 (1177)
T KOG1025|consen  863 PIKWMALESIRI--RKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGERLSQPPICTIDVYMVMVKCWMID  940 (1177)
T ss_pred             CcHHHHHHHhhc--cCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccccCCCCCCccHHHHHHHHHHhccC
Confidence            467899999888  569999999999999999988 888888764  444556667777888899999999999999999


Q ss_pred             CCCCCCHHHHhh
Q 032788           98 PNDRPTAAQLME  109 (133)
Q Consensus        98 p~~R~s~~~~l~  109 (133)
                      +..||.++++..
T Consensus       941 ~~~rp~fkel~~  952 (1177)
T KOG1025|consen  941 ADSRPTFKELAE  952 (1177)
T ss_pred             cccCccHHHHHH
Confidence            999999987654

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.13  E-value=8.3e-11  Score=78.26  Aligned_cols=95  Identities=19%  Similarity=0.267  Sum_probs=75.3

Q ss_pred             hhhccccccccccccccccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCChH--HH-HHHHHhCCCCCCCCCCCHHHHHH
Q 032788           14 RRKWHVSRWNSLTDQVVNSKNG-GYGLPADIWSVGCTVLEMLTRCRPYFGVE--WA-LFKIARGELPPIPDSVSRDARDF   89 (133)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~-~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~   89 (133)
                      +.......+.|++||.+..... ..-..+|+||+++++||+-+++.||....  ++ .....++.....|...+.....+
T Consensus       342 qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippgis~hm~kl  421 (448)
T KOG0195|consen  342 QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGISRHMNKL  421 (448)
T ss_pred             eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCccHHHHHH
Confidence            3444577899999999875311 23468999999999999999999998765  22 22334677778899999999999


Q ss_pred             HHHHcccCCCCCCCHHHHh
Q 032788           90 ILKCLQVNPNDRPTAAQLM  108 (133)
Q Consensus        90 ~~~~l~~~p~~R~s~~~~l  108 (133)
                      +.-|.+.||.+||.+..++
T Consensus       422 m~icmnedpgkrpkfdmiv  440 (448)
T KOG0195|consen  422 MNICMNEDPGKRPKFDMIV  440 (448)
T ss_pred             HHHHhcCCCCcCCCcceeh
Confidence            9999999999999987665

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.09  E-value=5.9e-10  Score=72.54  Aligned_cols=97  Identities=29%  Similarity=0.423  Sum_probs=71.0

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHh----------------CCCCC--
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIAR----------------GELPP--   77 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~----------------~~~~~--   77 (133)
                      +.+..|.-||.+... ..|+..-|+||+||++..|..++-||..-.   +++-++.+                ...+.  
T Consensus       193 VASRyfKGPELLVdy-~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~  271 (338)
T KOG0668|consen  193 VASRYFKGPELLVDY-QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFE  271 (338)
T ss_pred             eehhhcCCchheeec-hhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHh
Confidence            667788999998863 458999999999999999988888875421   22221111                00000  


Q ss_pred             ------------------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           78 ------------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        78 ------------------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                                        ...-..++..+++..++..|.++|+|+.|++.||||...
T Consensus       272 ~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~  328 (338)
T KOG0668|consen  272 DILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPV  328 (338)
T ss_pred             hHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHH
Confidence                              011235789999999999999999999999999999754

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.08  E-value=1.2e-10  Score=82.67  Aligned_cols=95  Identities=20%  Similarity=0.324  Sum_probs=68.3

Q ss_pred             hhhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhCCCCCCCCCCCHHHHHHH
Q 032788           14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELPPIPDSVSRDARDFI   90 (133)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (133)
                      ..+..+||..||+||.+++  ..|+.++|||+||++++|++..   |....   ..+..+..+..++.-..--+.-..|+
T Consensus       418 ~~t~~~gt~~YmsPEQi~g--~~y~~kvdIyaLGlil~EL~~~---f~T~~er~~t~~d~r~g~ip~~~~~d~p~e~~ll  492 (516)
T KOG1033|consen  418 SHTQQVGTLLYMSPEQIRG--QQYSEKVDIYALGLILAELLIQ---FSTQFERIATLTDIRDGIIPPEFLQDYPEEYTLL  492 (516)
T ss_pred             hhhhcccccccCCHHHHhh--hhhhhhcchhhHHHHHHHHHHH---hccHHHHHHhhhhhhcCCCChHHhhcCcHHHHHH
Confidence            3455699999999999998  4599999999999999999872   11111   22333444444322223345567899


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~  113 (133)
                      +.++...|.+||++.+...|.|.
T Consensus       493 ~~lls~~p~~RP~~~~~~~~~~~  515 (516)
T KOG1033|consen  493 QQLLSPSPEERPSAIEVALHEFL  515 (516)
T ss_pred             HHhcCCCcccCchHHHHhhhhhc
Confidence            99999999999988777666654

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.05  E-value=1.3e-09  Score=68.67  Aligned_cols=99  Identities=25%  Similarity=0.355  Sum_probs=70.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCC------------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGEL------------------   75 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~------------------   75 (133)
                      ..+-|.+|.+|+++-+. .-|+...|+||.||++.|+.. |.+.|-+.+  .++.++.....                  
T Consensus       160 aevvtlwyrppdvlfga-kly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~  238 (292)
T KOG0662|consen  160 AEVVTLWYRPPDVLFGA-KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKP  238 (292)
T ss_pred             ceeeeeeccCcceeeee-ehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcc
Confidence            34678899999999874 458889999999999999977 555555543  34333322111                  


Q ss_pred             -CCCCC---------CCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           76 -PPIPD---------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        76 -~~~~~---------~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                       +.++.         .+.....++++.++.-+|.+|++++.+++||||...
T Consensus       239 yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~  289 (292)
T KOG0662|consen  239 YPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF  289 (292)
T ss_pred             cCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence             00111         123456899999999999999999999999999764

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.00  E-value=6.7e-11  Score=87.21  Aligned_cols=104  Identities=20%  Similarity=0.265  Sum_probs=77.6

Q ss_pred             hhhccccccccccccccccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCChHHH--HHHHHhCCC--------CCCCCCC
Q 032788           14 RRKWHVSRWNSLTDQVVNSKNGGY-GLPADIWSVGCTVLEMLTRCRPYFGVEWA--LFKIARGEL--------PPIPDSV   82 (133)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~-~~~~diws~g~~~~~l~~~~~p~~~~~~~--~~~~~~~~~--------~~~~~~~   82 (133)
                      ....++|+..|+|||++..  ..| ...+||||+|++++.|..|..||......  .........        ..+...+
T Consensus       480 ~~~g~~gS~pY~apE~~~~--~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  557 (601)
T KOG0590|consen  480 ESSGIVGSDPYLAPEVLTG--KEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLL  557 (601)
T ss_pred             hhcCcccCCcCcCcccccc--cccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhc
Confidence            3456799999999999987  336 56899999999999999999998754311  101111111        1123456


Q ss_pred             CHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCCC
Q 032788           83 SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPT  119 (133)
Q Consensus        83 ~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~~  119 (133)
                      +.+.+.++.++++.+|.+|.+++++++.+|++.--..
T Consensus       558 p~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~~c  594 (601)
T KOG0590|consen  558 PRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIECC  594 (601)
T ss_pred             hhhHHHHHHHHccCChhheecHHHHhhChHhhhcceE
Confidence            7788999999999999999999999999999875443

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.91  E-value=1.4e-09  Score=75.94  Aligned_cols=90  Identities=24%  Similarity=0.529  Sum_probs=63.7

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCh---------HHHHHHHHhCCC-----CCCC-CCCC
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV---------EWALFKIARGEL-----PPIP-DSVS   83 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~---------~~~~~~~~~~~~-----~~~~-~~~~   83 (133)
                      .||.+|++||.+..  +..+.++||||+|+++.|+++|+.+....         .+....+..+..     +.+. ....
T Consensus       239 ~gt~gY~~PEy~~~--g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~  316 (361)
T KOG1187|consen  239 MGTFGYLAPEYAST--GKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYP  316 (361)
T ss_pred             CCCCccCChhhhcc--CCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCC
Confidence            89999999999986  45899999999999999999998776532         122222222211     1211 1222


Q ss_pred             -----HHHHHHHHHHcccCCCCCCCHHHHhhC
Q 032788           84 -----RDARDFILKCLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        84 -----~~~~~~~~~~l~~~p~~R~s~~~~l~~  110 (133)
                           ..+..+..+|+..++..||++.|++..
T Consensus       317 ~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~  348 (361)
T KOG1187|consen  317 DEKEVKKLAELALRCLRPDPKERPTMSQVVKE  348 (361)
T ss_pred             hHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHH
Confidence                 235677788999999999999997653

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.82  E-value=2.8e-09  Score=77.25  Aligned_cols=92  Identities=23%  Similarity=0.388  Sum_probs=73.4

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccC
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQVN   97 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   97 (133)
                      .|||..|||||++++    ....+|.||+|++++++++|..||.+  +....+ .......|..+.....+++..++..+
T Consensus       153 ~cgt~eymApEI~~g----h~~a~D~ws~gvl~felltg~~pf~~--~~~~~I-l~~~~~~p~~l~~~a~~~~~~l~~r~  225 (612)
T KOG0603|consen  153 ACGTYEYRAPEIING----HLSAADWWSFGVLAFELLTGTLPFGG--DTMKRI-LKAELEMPRELSAEARSLFRQLFKRN  225 (612)
T ss_pred             cccchhhhhhHhhhc----cCCcccchhhhhhHHHHhhCCCCCch--HHHHHH-hhhccCCchhhhHHHHHHHHHHHhhC
Confidence            399999999999984    67899999999999999999999988  222222 22233557778888899999999999


Q ss_pred             CCCCCC-----HHHHhhCCCCCCC
Q 032788           98 PNDRPT-----AAQLMEHPFVKRP  116 (133)
Q Consensus        98 p~~R~s-----~~~~l~~~~~~~~  116 (133)
                      |.+|.-     ..++++|+||...
T Consensus       226 p~nrLg~~~~~~~eik~h~f~~~i  249 (612)
T KOG0603|consen  226 PENRLGAGPDGVDEIKQHEFFQSI  249 (612)
T ss_pred             HHHHhccCcchhHHHhccchheee
Confidence            998853     5688999998753

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=98.81  E-value=6.5e-09  Score=66.75  Aligned_cols=62  Identities=24%  Similarity=0.446  Sum_probs=46.9

Q ss_pred             cccccccccccccccC--CCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhCCCCCCC
Q 032788           18 HVSRWNSLTDQVVNSK--NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELPPIP   79 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~--~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~~~~~~~   79 (133)
                      ..|--.|||||++..+  ..+|+.++|+||+|+.++|+.+++.||..+.   .++..+.+...+.+|
T Consensus       208 daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVeep~P~Lp  274 (282)
T KOG0984|consen  208 DAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEPSPQLP  274 (282)
T ss_pred             hcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcCCCCCCc
Confidence            3555679999999852  2369999999999999999999999998765   455555555555544

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.73  E-value=3.1e-08  Score=62.95  Aligned_cols=63  Identities=35%  Similarity=0.607  Sum_probs=55.0

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccC
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQVN   97 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   97 (133)
                      ..+...|++||..... ..++.+.|+|++|++++++                              ..+.+++..|+..+
T Consensus       153 ~~~~~~~~~pe~~~~~-~~~~~~~D~~~lg~~~~~l------------------------------~~~~~~l~~~l~~~  201 (215)
T cd00180         153 IVGTPAYMAPEVLLGK-GYYSEKSDIWSLGVILYEL------------------------------PELKDLIRKMLQKD  201 (215)
T ss_pred             ccCCCCccChhHhccc-CCCCchhhhHHHHHHHHHH------------------------------HHHHHHHHHHhhCC
Confidence            4577789999998763 2578899999999999988                              78899999999999


Q ss_pred             CCCCCCHHHHhhCC
Q 032788           98 PNDRPTAAQLMEHP  111 (133)
Q Consensus        98 p~~R~s~~~~l~~~  111 (133)
                      |.+|+++++++.++
T Consensus       202 p~~R~~~~~l~~~~  215 (215)
T cd00180         202 PEKRPSAKEILEHL  215 (215)
T ss_pred             cccCcCHHHHhhCC
Confidence            99999999999764

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=98.71  E-value=3.9e-09  Score=77.46  Aligned_cols=48  Identities=23%  Similarity=0.305  Sum_probs=42.2

Q ss_pred             hhhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 032788           14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG   62 (133)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~   62 (133)
                      .+.+++||..|++||.+..+ ..|+..+|.||+||++|++.+|..||..
T Consensus       179 ~~~S~vGT~~YLhPel~E~q-~~y~~tVDLWS~GvtlY~caTG~lPF~p  226 (732)
T KOG4250|consen  179 LFTSLVGTEEYLHPELYERQ-KKYTATVDLWSFGVTLYECATGELPFIP  226 (732)
T ss_pred             eeeeecCchhhcChHHHhhc-cCcCceeehhhhhhHHHHHhccCCCCCc
Confidence            45678999999999999953 4589999999999999999999999854

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=98.60  E-value=8.7e-08  Score=67.87  Aligned_cols=88  Identities=19%  Similarity=0.284  Sum_probs=58.9

Q ss_pred             cccccccccccccccCCC----CCCchhHHHHHHHHHHHHHhCCCCC------------CC-------hHH-HHHHHHhC
Q 032788           18 HVSRWNSLTDQVVNSKNG----GYGLPADIWSVGCTVLEMLTRCRPY------------FG-------VEW-ALFKIARG   73 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~----~~~~~~diws~g~~~~~l~~~~~p~------------~~-------~~~-~~~~~~~~   73 (133)
                      -+||..|||||++.+...    ..-...|+|++|.++||+.++-..+            ..       .++ +...+.+.
T Consensus       378 qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK  457 (534)
T KOG3653|consen  378 QVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKK  457 (534)
T ss_pred             hhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhc
Confidence            499999999999986211    1124689999999999998853322            10       011 12233444


Q ss_pred             CCCCCCCCC-----CHHHHHHHHHHcccCCCCCCCHH
Q 032788           74 ELPPIPDSV-----SRDARDFILKCLQVNPNDRPTAA  105 (133)
Q Consensus        74 ~~~~~~~~~-----~~~~~~~~~~~l~~~p~~R~s~~  105 (133)
                      .++..+...     ..-+.+.++.||.-|+..|.|+.
T Consensus       458 ~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~  494 (534)
T KOG3653|consen  458 QRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAG  494 (534)
T ss_pred             cCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence            455554432     34678899999999999999864

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=98.41  E-value=6.4e-07  Score=64.53  Aligned_cols=89  Identities=18%  Similarity=0.319  Sum_probs=63.4

Q ss_pred             ccccccccccccC--CCC---CCchhHHHHHHHHHHHHHhCCCCCCChH------HHHHHHHh-CCCCCCCC-----CCC
Q 032788           21 RWNSLTDQVVNSK--NGG---YGLPADIWSVGCTVLEMLTRCRPYFGVE------WALFKIAR-GELPPIPD-----SVS   83 (133)
Q Consensus        21 t~~~~aPE~~~~~--~~~---~~~~~diws~g~~~~~l~~~~~p~~~~~------~~~~~~~~-~~~~~~~~-----~~~   83 (133)
                      ...|.|||.+...  ...   .+.+.|+||+|++++|++.+..||....      +....+.+ +.....|.     ...
T Consensus       114 ~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~  193 (484)
T KOG1023|consen  114 ALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELP  193 (484)
T ss_pred             HHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcc
Confidence            3469999998862  111   3567899999999999999999986522      34444444 22222222     234


Q ss_pred             HHHHHHHHHHcccCCCCCCCHHHHhh
Q 032788           84 RDARDFILKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        84 ~~~~~~~~~~l~~~p~~R~s~~~~l~  109 (133)
                      ..+..++..||..+|..||+++++-.
T Consensus       194 ~~l~~l~~~cw~e~P~~rPs~~~i~~  219 (484)
T KOG1023|consen  194 PELLLLVARCWEEIPEKRPSIEQIRS  219 (484)
T ss_pred             hHHHHHHHHhcccChhhCccHHHHHh
Confidence            46889999999999999999998753

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.40  E-value=3.9e-07  Score=64.28  Aligned_cols=93  Identities=24%  Similarity=0.366  Sum_probs=59.2

Q ss_pred             hccccccccccccccccCCC--CC--CchhHHHHHHHHHHHHHhC----------CCCCCCh---H---HHHHHH--HhC
Q 032788           16 KWHVSRWNSLTDQVVNSKNG--GY--GLPADIWSVGCTVLEMLTR----------CRPYFGV---E---WALFKI--ARG   73 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~--~~--~~~~diws~g~~~~~l~~~----------~~p~~~~---~---~~~~~~--~~~   73 (133)
                      +..+||-.|||||++.....  .+  -.-+||||+|.++||+..+          ..||.+.   +   +...++  .+.
T Consensus       378 N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~  457 (513)
T KOG2052|consen  378 NPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQK  457 (513)
T ss_pred             CCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecc
Confidence            34599999999999875211  12  1358999999999998763          3455331   1   111111  223


Q ss_pred             CCCCCCCCC-----CHHHHHHHHHHcccCCCCCCCHHHHh
Q 032788           74 ELPPIPDSV-----SRDARDFILKCLQVNPNDRPTAAQLM  108 (133)
Q Consensus        74 ~~~~~~~~~-----~~~~~~~~~~~l~~~p~~R~s~~~~l  108 (133)
                      ..+..|...     ...+..+++.||..+|..|.++=.+.
T Consensus       458 ~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriK  497 (513)
T KOG2052|consen  458 LRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIK  497 (513)
T ss_pred             cCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence            333333322     24677899999999999999875543

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.26  E-value=2.6e-06  Score=55.03  Aligned_cols=46  Identities=33%  Similarity=0.473  Sum_probs=38.3

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG   62 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~   62 (133)
                      ....++..|++||... ....++.++|+|++|++++++++|+.||..
T Consensus       157 ~~~~~~~~~~~pe~~~-~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      157 KTVKGTPFYLAPEVLL-GGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             cceeccCCcCCHhHhc-CCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            3457788899999984 224577899999999999999999999966

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.25  E-value=2.6e-06  Score=66.19  Aligned_cols=90  Identities=19%  Similarity=0.289  Sum_probs=60.1

Q ss_pred             ccccccccccccccC--------CCC-CCchhHHHHHHHHHHHHHh-CCCCCCChHHHHHHHHhCCCCC----CCCCCCH
Q 032788           19 VSRWNSLTDQVVNSK--------NGG-YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFKIARGELPP----IPDSVSR   84 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~--------~~~-~~~~~diws~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~----~~~~~~~   84 (133)
                      -..-+|+|||++...        ... .+.+.||+|+||++.|++. |.++|.- . ++...+.+..-.    +......
T Consensus       188 rRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L-S-QL~aYr~~~~~~~e~~Le~Ied~  265 (1431)
T KOG1240|consen  188 RRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL-S-QLLAYRSGNADDPEQLLEKIEDV  265 (1431)
T ss_pred             CceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH-H-HHHhHhccCccCHHHHHHhCcCc
Confidence            334579999998741        111 4568999999999999977 4555532 2 222233332100    0111234


Q ss_pred             HHHHHHHHHcccCCCCCCCHHHHhhC
Q 032788           85 DARDFILKCLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        85 ~~~~~~~~~l~~~p~~R~s~~~~l~~  110 (133)
                      .++.++..|++.||.+|.++++.|+.
T Consensus       266 ~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  266 SLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             cHHHHHHHHHccCchhccCHHHHHHh
Confidence            78899999999999999999998875

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=98.16  E-value=4.9e-06  Score=58.61  Aligned_cols=87  Identities=20%  Similarity=0.373  Sum_probs=66.4

Q ss_pred             ccccccccccccccCCCCC----CchhHHHHHHHHHHHHHhCCCCCCChHHH---HHHHHhCCCCCCCCCCCHHHHHHHH
Q 032788           19 VSRWNSLTDQVVNSKNGGY----GLPADIWSVGCTVLEMLTRCRPYFGVEWA---LFKIARGELPPIPDSVSRDARDFIL   91 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~----~~~~diws~g~~~~~l~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~   91 (133)
                      -|+..-||||+...-.+..    -.+.|.|++|.+.||++....||-...+.   ....++...+..+..++..+.+++.
T Consensus       412 GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~  491 (598)
T KOG4158|consen  412 GGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQLVF  491 (598)
T ss_pred             CCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChHHHHHHH
Confidence            5666789999987311111    24899999999999999999998664321   1224455667788899999999999


Q ss_pred             HHcccCCCCCCCHH
Q 032788           92 KCLQVNPNDRPTAA  105 (133)
Q Consensus        92 ~~l~~~p~~R~s~~  105 (133)
                      .++..||.+|++..
T Consensus       492 ~lL~r~pskRvsp~  505 (598)
T KOG4158|consen  492 DLLKRDPSKRVSPN  505 (598)
T ss_pred             HHhcCCccccCCcc
Confidence            99999999999854

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.09  E-value=7.6e-06  Score=63.36  Aligned_cols=106  Identities=25%  Similarity=0.331  Sum_probs=80.3

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-HHHHHHHhCCCCC---CCCCCCHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPP---IPDSVSRDARDFIL   91 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~   91 (133)
                      ....||+.|.+||...+  ......+|.|+.|+++++.+.|.+||.... +....-+.+...+   -+.....+..+++.
T Consensus       993 ~~~~~t~~~laPe~~lg--~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~ 1070 (1205)
T KOG0606|consen  993 HAVVGTPDYLAPEILLG--RRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLIN 1070 (1205)
T ss_pred             ccccCCCcccCCccccc--ccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhh
Confidence            34589999999999998  457889999999999999999999997764 3333222222222   23456778899999


Q ss_pred             HHcccCCCCCCCHH---HHhhCCCCCCCCCCCCCC
Q 032788           92 KCLQVNPNDRPTAA---QLMEHPFVKRPLPTSWGL  123 (133)
Q Consensus        92 ~~l~~~p~~R~s~~---~~l~~~~~~~~~~~~~~~  123 (133)
                      ..+..++.+|..+.   ++..|+||+...+.++.+
T Consensus      1071 ~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~~~l~~ 1105 (1205)
T KOG0606|consen 1071 RLLTEEPTQRLGAKGAAEVKGHPFFQDVDWENLAL 1105 (1205)
T ss_pred             hhhccCchhccCcccccccccCCccCCCCcccccc
Confidence            99999999998776   788899998765544433

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=97.89  E-value=0.00012  Score=49.23  Aligned_cols=100  Identities=26%  Similarity=0.335  Sum_probs=70.4

Q ss_pred             hhccccccccccccccccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCChH------HHHHHHHhCCCC-CC-CCCC---
Q 032788           15 RKWHVSRWNSLTDQVVNSKN-GGYGLPADIWSVGCTVLEMLTRCRPYFGVE------WALFKIARGELP-PI-PDSV---   82 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~-~~~~~~~diws~g~~~~~l~~~~~p~~~~~------~~~~~~~~~~~~-~~-~~~~---   82 (133)
                      ....+|+..|++||.+.... ..+....|+|++|+++++++.+..|+....      .....+...... .. ....   
T Consensus       165 ~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (384)
T COG0515         165 PSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNP  244 (384)
T ss_pred             ccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCcccc
Confidence            35679999999999998631 247889999999999999999998876543      222222222221 11 1111   


Q ss_pred             ---CHHHHHHHHHHcccCCCCCCCHHHHhhCCCCC
Q 032788           83 ---SRDARDFILKCLQVNPNDRPTAAQLMEHPFVK  114 (133)
Q Consensus        83 ---~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~  114 (133)
                         .....+++..++..+|..|.+..+...+.+..
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~  279 (384)
T COG0515         245 ELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLA  279 (384)
T ss_pred             chhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhh
Confidence               14788999999999999999998877765443

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=97.73  E-value=9.5e-06  Score=55.12  Aligned_cols=77  Identities=18%  Similarity=0.232  Sum_probs=48.5

Q ss_pred             ccccccccccccC------CCCCCchhHHHHHHHHHHHHHhCCCCCCChHHHH-HHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           21 RWNSLTDQVVNSK------NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWAL-FKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        21 t~~~~aPE~~~~~------~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      +..|.+||.....      ...++.+.|.|.+|+++|.++.+..||....... ...   ...... .++..+..++..+
T Consensus       205 ~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~---~f~~C~-~~Pe~v~~LI~~l  280 (288)
T PF14531_consen  205 PVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW---DFSRCR-DMPEPVQFLIRGL  280 (288)
T ss_dssp             -TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG---GGTTSS----HHHHHHHHHH
T ss_pred             CcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc---cchhcC-CcCHHHHHHHHHH
Confidence            3568888876431      1236789999999999999999999997543110 000   111223 6788999999999


Q ss_pred             cccCCCCC
Q 032788           94 LQVNPNDR  101 (133)
Q Consensus        94 l~~~p~~R  101 (133)
                      +..+|.+|
T Consensus       281 L~~~~~~R  288 (288)
T PF14531_consen  281 LQRNPEDR  288 (288)
T ss_dssp             T-SSGGGS
T ss_pred             ccCCcccC
Confidence            99999877

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=97.71  E-value=6e-06  Score=60.43  Aligned_cols=45  Identities=24%  Similarity=0.569  Sum_probs=38.2

Q ss_pred             hhccccccccccccccccCCCCC-CchhHHHHHHHHHHHHHhCCCCCC
Q 032788           15 RKWHVSRWNSLTDQVVNSKNGGY-GLPADIWSVGCTVLEMLTRCRPYF   61 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~-~~~~diws~g~~~~~l~~~~~p~~   61 (133)
                      .+.+.||..|.|||++.+.  .| +...|||++|+++|.+..+..||-
T Consensus       725 fd~f~gtv~~aapevl~g~--~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  725 FDVFVGTVDYAAPEVLGGE--KYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             cceeeeeccccchhhhCCC--ccCCCcchhhhhhheeeEEEeccCCCc
Confidence            4568999999999999984  35 678999999999999888877764

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.68  E-value=7.7e-06  Score=60.95  Aligned_cols=98  Identities=20%  Similarity=0.175  Sum_probs=74.7

Q ss_pred             cccc-ccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhC---CCCCCCCCCCHHHHHH
Q 032788           17 WHVS-RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARG---ELPPIPDSVSRDARDF   89 (133)
Q Consensus        17 ~~~g-t~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~   89 (133)
                      ..+| ++.|.+||..... .-.....|+||+|+++..++.|..|+....   .........   .....+..+.....++
T Consensus       187 ~~~g~s~~y~a~E~~~~~-~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (601)
T KOG0590|consen  187 DRCGSSPPYGAPEHLSGK-AYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDL  265 (601)
T ss_pred             cccCCCCCCCCcccccch-hhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCccccCChhhhhc
Confidence            3488 9999999999873 124678999999999999999988876433   111111111   1233456777888899


Q ss_pred             HHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           90 ILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        90 ~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      +.+++..++..|.+.+++..++|+..
T Consensus       266 l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  266 LHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             ccccccCCchhccccccccccccccc
Confidence            99999999999999999999999977

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=97.55  E-value=4.7e-05  Score=51.28  Aligned_cols=86  Identities=20%  Similarity=0.251  Sum_probs=59.3

Q ss_pred             cccccccccccc---CCCCCCchhHHHHHHHHHHHHHhCCCCCCChH------HHHHHHHhCCCCCCCC---CCCHHHHH
Q 032788           21 RWNSLTDQVVNS---KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE------WALFKIARGELPPIPD---SVSRDARD   88 (133)
Q Consensus        21 t~~~~aPE~~~~---~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~   88 (133)
                      +..|-+||...-   ..-......|+|.+|+++|.+++|..||....      +.......+..+..|.   -.+..+..
T Consensus       183 ~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r  262 (378)
T KOG1345|consen  183 VNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALR  262 (378)
T ss_pred             hcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHH
Confidence            345788887642   11123567899999999999999999997432      4445555555555554   34677788


Q ss_pred             HHHHHcccCCCCCCCHHH
Q 032788           89 FILKCLQVNPNDRPTAAQ  106 (133)
Q Consensus        89 ~~~~~l~~~p~~R~s~~~  106 (133)
                      +..+-+..++.+|....+
T Consensus       263 ~Fkk~lt~~~~drcki~~  280 (378)
T KOG1345|consen  263 LFKKSLTPRFKDRCKIWT  280 (378)
T ss_pred             HHHHhcCCcccccchhHH
Confidence            888888899988854433

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.01  E-value=0.00066  Score=47.15  Aligned_cols=86  Identities=24%  Similarity=0.245  Sum_probs=55.3

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCh--H----HHHHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV--E----WALFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      -|.++|-+||.-.-  ...+..+|||++|.+..++..+..--...  .    ..+...+.+.    .   ...-.++++.
T Consensus       243 ~~~~g~~a~~sg~~--tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~l----e---n~lqr~~i~k  313 (458)
T KOG1266|consen  243 TSLPGFSAPESGTT--TNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGL----E---NGLQRGSITK  313 (458)
T ss_pred             ccCCccccCCcCcc--cccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeec----c---CccccCcCcc
Confidence            44567888877665  33577899999998888876654321111  1    1111111111    1   1122457889


Q ss_pred             HcccCCCCCCCHHHHhhCCCC
Q 032788           93 CLQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~~  113 (133)
                      |+...|++||++++++.||.+
T Consensus       314 cl~~eP~~rp~ar~llfHpll  334 (458)
T KOG1266|consen  314 CLEGEPNGRPDARLLLFHPLL  334 (458)
T ss_pred             cccCCCCCCcchhhhhcCcee
Confidence            999999999999999999954

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=96.89  E-value=0.00017  Score=53.80  Aligned_cols=95  Identities=17%  Similarity=0.229  Sum_probs=67.3

Q ss_pred             cccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCC-CCChH-HHHHHHHhCC----CCCCCCCCCHHHHHHHHHHcc
Q 032788           22 WNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRP-YFGVE-WALFKIARGE----LPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        22 ~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p-~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ..|.+||.+.+  ...+.+.|++|+|+.+|.+..+..+ +.... ........+.    .......++.++.+-+.+++.
T Consensus       173 ~~f~apE~~~~--~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~  250 (700)
T KOG2137|consen  173 LNFLAPEYLLG--TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLN  250 (700)
T ss_pred             cccccchhhcc--ccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhc
Confidence            46899999987  3467899999999999888744433 33222 1111111111    112246788999999999999


Q ss_pred             cCCCCCCCHHHHhhCCCCCCCCC
Q 032788           96 VNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      .+..-||++.++...+||++...
T Consensus       251 ~~~~~rp~~~~l~~~~ff~D~~~  273 (700)
T KOG2137|consen  251 GDSAVRPTLDLLLSIPFFSDPGL  273 (700)
T ss_pred             CCcccCcchhhhhcccccCCchh
Confidence            99999999999999999987543

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=96.06  E-value=0.063  Score=37.26  Aligned_cols=90  Identities=18%  Similarity=0.107  Sum_probs=62.3

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHHHHHHhCCCCC-CCCCCCHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WALFKIARGELPP-IPDSVSRDARDFI   90 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~   90 (133)
                      .+.||..|.+++.-.+  ...+.+.|+||++.++.++..|..||.+..     ............. .....+..+..+.
T Consensus       196 ~~rGT~ry~S~~~H~~--~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (322)
T KOG1164|consen  196 LFRGTLRYASINVHLG--IEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKIL  273 (322)
T ss_pred             CCCCccccccHHHhCC--CccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHH
Confidence            3569999999998776  447899999999999999999999986543     1111111111111 2334567777887


Q ss_pred             HHHcccCCCCCCCHHHHh
Q 032788           91 LKCLQVNPNDRPTAAQLM  108 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l  108 (133)
                      ..+-..+-..+|.-..+.
T Consensus       274 ~~~~~~~~~~~Pdy~~~~  291 (322)
T KOG1164|consen  274 EYIDSLDYEDKPDYEKLA  291 (322)
T ss_pred             HHhhccCCcCCCCHHHHH
Confidence            777778888888876554

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=93.59  E-value=0.21  Score=36.57  Aligned_cols=89  Identities=16%  Similarity=0.206  Sum_probs=56.1

Q ss_pred             cccccccccccccccC-C--CCCCchhHHHHHHHHHHHHHh-CCCCCCChH---------H-HHHH-----H-HhCC-CC
Q 032788           18 HVSRWNSLTDQVVNSK-N--GGYGLPADIWSVGCTVLEMLT-RCRPYFGVE---------W-ALFK-----I-ARGE-LP   76 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~-~--~~~~~~~diws~g~~~~~l~~-~~~p~~~~~---------~-~~~~-----~-~~~~-~~   76 (133)
                      -+|...|.+||...-. -  .+.+...|.+.+|+++++++. |+.||.+..         + .+..     . ..+. ..
T Consensus       176 pVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~  255 (637)
T COG4248         176 PVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLK  255 (637)
T ss_pred             ccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCC
Confidence            3888999999987621 1  123567899999999999866 489997632         1 1110     0 0111 11


Q ss_pred             CCC-----CCCCHHHHHHHHHHcccC--CCCCCCHHH
Q 032788           77 PIP-----DSVSRDARDFILKCLQVN--PNDRPTAAQ  106 (133)
Q Consensus        77 ~~~-----~~~~~~~~~~~~~~l~~~--p~~R~s~~~  106 (133)
                      +.|     ..++..+..+...|+...  ++-||+++.
T Consensus       256 p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a  292 (637)
T COG4248         256 PPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKA  292 (637)
T ss_pred             CCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence            112     235678888888888643  568998753

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=93.31  E-value=0.09  Score=38.97  Aligned_cols=94  Identities=18%  Similarity=0.183  Sum_probs=61.2

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCh-HHHHHHHHhCCCC-CCCCCCCHHHHHHHHHHccc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALFKIARGELP-PIPDSVSRDARDFILKCLQV   96 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~   96 (133)
                      .|...|++||..++.   ++...|++++|-+..+...+-...... ...+..+.....+ .+-...+..+...+..++..
T Consensus       289 ~~~~~Y~~ke~~~~l---~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~  365 (524)
T KOG0601|consen  289 EGDCIYAAKELLNGL---ATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDE  365 (524)
T ss_pred             CCCceEeChhhhccc---cchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchhhhhHHHHhcCc
Confidence            566679999999862   788999999999988775554333221 1111111111110 11112334555577889999


Q ss_pred             CCCCCCCHHHHhhCCCCCC
Q 032788           97 NPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        97 ~p~~R~s~~~~l~~~~~~~  115 (133)
                      ++..|++++.+.+|++...
T Consensus       366 ~~~~~~~~q~~~~l~~i~s  384 (524)
T KOG0601|consen  366 DPRLRLTAQILTALNVIHS  384 (524)
T ss_pred             chhhhhHHHHHhccccccc
Confidence            9999999999999998764

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=87.99  E-value=0.54  Score=35.41  Aligned_cols=78  Identities=19%  Similarity=0.218  Sum_probs=46.4

Q ss_pred             CCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCC-----------CCCCCHHHHHHHHHHcccCCCCCCC
Q 032788           37 YGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI-----------PDSVSRDARDFILKCLQVNPNDRPT  103 (133)
Q Consensus        37 ~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~l~~~p~~R~s  103 (133)
                      .+.|+|||++|.++.++--|..-+....  +....+.+-...+.           .-.+.+.+..+...|+...|..|+.
T Consensus       108 ~~pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l  187 (725)
T KOG1093|consen  108 IGPKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPL  187 (725)
T ss_pred             CCcchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccc
Confidence            3469999999999988866544333221  11111111111110           1123456677888899999999987


Q ss_pred             HHHHhhCCCCC
Q 032788          104 AAQLMEHPFVK  114 (133)
Q Consensus       104 ~~~~l~~~~~~  114 (133)
                      ..++.+++-|.
T Consensus       188 ~~~~~k~~i~~  198 (725)
T KOG1093|consen  188 PMELSKRCSFT  198 (725)
T ss_pred             hhHHhcCccHH
Confidence            77777776543

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=82.76  E-value=1.2  Score=36.56  Aligned_cols=86  Identities=17%  Similarity=0.268  Sum_probs=54.4

Q ss_pred             cccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccCCCCC
Q 032788           22 WNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQVNPNDR  101 (133)
Q Consensus        22 ~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~R  101 (133)
                      ..+.++|....+........|+|.+|.....+..+...-... ......       ..........+....|+..++.+|
T Consensus       354 ~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~-~~~~~~-------l~~~~~~~~~d~~~~~~~~~~~~R  425 (1351)
T KOG1035|consen  354 EIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKS-AVPVSL-------LDVLSTSELLDALPKCLDEDSEER  425 (1351)
T ss_pred             cccccccccccccchhhhhhHHHHHHHHHhhhhhcCcccccc-cchhhh-------hccccchhhhhhhhhhcchhhhhc
Confidence            446666666653322344579999999988877654322110 011111       111122266778889999999999


Q ss_pred             CCHHHHhhCCCCCC
Q 032788          102 PTAAQLMEHPFVKR  115 (133)
Q Consensus       102 ~s~~~~l~~~~~~~  115 (133)
                      .++.+++.|+|.+.
T Consensus       426 l~~~~ll~~~f~~~  439 (1351)
T KOG1035|consen  426 LSALELLTHPFLRF  439 (1351)
T ss_pred             cchhhhhhchhccc
Confidence            99999999998764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	133
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		6e-14
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		7e-14
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		1e-10
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		1e-10
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		4e-10
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		5e-10
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		7e-10
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		7e-10
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		8e-10
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		8e-10
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		3e-09
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		8e-09
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		1e-08
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		1e-08
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		1e-08
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		1e-08
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		2e-08
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		3e-08
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		3e-08
3a7f_A	303	Human Mst3 Kinase Length = 303		4e-08
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		4e-08
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		4e-08
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		4e-08
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		4e-08
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		5e-08
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		5e-08
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		6e-08
4fie_A	423	Full-Length Human Pak4 Length = 423		6e-08
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		7e-08
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		7e-08
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		7e-08
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		7e-08
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		8e-08
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		9e-08
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		2e-07
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		2e-07
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		2e-07
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		2e-07
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		2e-07
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		2e-07
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		2e-07
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		2e-07
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		3e-07
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		5e-07
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		5e-07
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		6e-07
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		7e-07
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		8e-07
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		9e-07
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		1e-06
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		1e-06
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		1e-06
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		2e-06
3soa_A	444	Full-Length Human Camkii Length = 444		3e-06
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		3e-06
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		4e-06
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		5e-06
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		5e-06
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		5e-06
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		5e-06
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		6e-06
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		7e-06
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		7e-06
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		7e-06
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		7e-06
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		7e-06
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		7e-06
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		7e-06
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		7e-06
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		7e-06
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		8e-06
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		8e-06
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		8e-06
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		8e-06
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		8e-06
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		8e-06
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		8e-06
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		8e-06
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		8e-06
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		8e-06
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		8e-06
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		8e-06
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		8e-06
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		8e-06
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		8e-06
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		8e-06
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		8e-06
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		8e-06
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		8e-06
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		9e-06
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		9e-06
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		9e-06
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-05
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		1e-05
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		2e-05
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		2e-05
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		2e-05
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		2e-05
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		2e-05
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-05
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		2e-05
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-05
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		3e-05
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		3e-05
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		3e-05
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		3e-05
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		4e-05
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		4e-05
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		4e-05
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		4e-05
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		5e-05
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		1e-04
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		1e-04
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-04
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		1e-04
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		1e-04
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		1e-04
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		1e-04
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		1e-04
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		1e-04
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		1e-04
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		1e-04
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		1e-04
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		1e-04
4exu_A	371	Mapk13, Inactive Form Length = 371		2e-04
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		2e-04
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-04
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		2e-04
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		2e-04
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		2e-04
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		2e-04
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		2e-04
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		2e-04
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		2e-04
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		2e-04
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		2e-04
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		2e-04
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-04
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		2e-04
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		2e-04
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		2e-04
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		2e-04
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		2e-04
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-04
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		2e-04
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-04
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		3e-04
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		3e-04
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		3e-04
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		3e-04
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		3e-04
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		3e-04
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		3e-04
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		3e-04
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		3e-04
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		4e-04
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		4e-04
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		4e-04
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		4e-04
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		4e-04
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		4e-04
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		4e-04
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		4e-04
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		4e-04
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		4e-04
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		4e-04
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		4e-04
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		4e-04
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		4e-04
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		4e-04
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		4e-04
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		4e-04
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		4e-04
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		4e-04
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		5e-04
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		5e-04
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		5e-04
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		5e-04
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		5e-04
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		5e-04
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		5e-04
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		5e-04
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		5e-04
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		5e-04
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		5e-04
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		5e-04
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		5e-04
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		6e-04
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		6e-04
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		6e-04
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		6e-04
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		6e-04
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		6e-04
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		6e-04
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		6e-04
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		6e-04
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		6e-04
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		6e-04
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		7e-04
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		7e-04
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		7e-04
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		7e-04
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		7e-04
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		7e-04
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		7e-04
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		7e-04
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		8e-04
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		8e-04
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		8e-04
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		8e-04
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		8e-04
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		8e-04
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		8e-04
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		8e-04
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		8e-04
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		8e-04
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		8e-04
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		8e-04
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		8e-04
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		8e-04
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		8e-04
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		8e-04
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		8e-04
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		8e-04
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		8e-04
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		8e-04
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		8e-04
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		8e-04
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		8e-04
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		8e-04
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		8e-04
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		8e-04
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		8e-04
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		8e-04
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		8e-04
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		8e-04
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		8e-04
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		8e-04
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		8e-04
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		9e-04
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		9e-04
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		9e-04
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		9e-04
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		9e-04
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		9e-04
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		9e-04
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		9e-04
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		9e-04

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 59/91 (64%), Gaps = 4/91 (4%)
Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV---EWALFKIARGEL-PPIPDSVS 83
           ++++    GYG  ADIWS+GCT++EM T   P++ +   + A+FK+   ++ P IP+S+S
Sbjct: 193 EIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMS 252
Query: 84  RDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
            +A+ FILKC + +P+ R  A  L+   F+K
Sbjct: 253 AEAKAFILKCFEPDPDKRACANDLLVDEFLK 283

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 59/91 (64%), Gaps = 4/91 (4%)
Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV---EWALFKIARGEL-PPIPDSVS 83
           ++++    GYG  ADIWS+GCT++EM T   P++ +   + A+FK+   ++ P IP+S+S
Sbjct: 179 EIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMS 238
Query: 84  RDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
            +A+ FILKC + +P+ R  A  L+   F+K
Sbjct: 239 AEAKAFILKCFEPDPDKRACANDLLVDEFLK 269

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDARD 88
           K+  Y   ADIWS+G T++EM     P+  +     L KIA+ + P +  P   S + RD
Sbjct: 195 KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRD 254
Query: 89  FILKCLQVNPNDRPTAAQLMEHPFV 113
           F+   L  NP  RP+AAQL+EHPFV
Sbjct: 255 FLKIALDKNPETRPSAAQLLEHPFV 279

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDARD 88
           K+  Y   ADIWS+G T++EM     P+  +     L KIA+ + P +  P   S + RD
Sbjct: 187 KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRD 246
Query: 89  FILKCLQVNPNDRPTAAQLMEHPFV 113
           F+   L  NP  RP+AAQL+EHPFV
Sbjct: 247 FLKIALDKNPETRPSAAQLLEHPFV 271

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSV-SRD 85
           ++    G Y    D+WS+G T +E+  R  P F +    AL+ IA+ E P +     S  
Sbjct: 183 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEY 242
Query: 86  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 118
            R+F+  CLQ  P DRPT+  L++H FV R  P
Sbjct: 243 FRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 275

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSV-SRD 85
           ++    G Y    D+WS+G T +E+  R  P F +    AL+ IA+ E P +     S  
Sbjct: 222 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEY 281
Query: 86  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 118
            R+F+  CLQ  P DRPT+  L++H FV R  P
Sbjct: 282 FRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 314

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 32  SKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDAR 87
           SK+  Y   AD+WS+G T++EM     P+  +     L KIA+ E P +  P   S + +
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFK 271
Query: 88  DFILKCLQVNPNDRPTAAQLMEHPFV 113
           DF+ KCL+ N + R T +QL++HPFV
Sbjct: 272 DFLKKCLEKNVDARWTTSQLLQHPFV 297

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 32  SKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDAR 87
           SK+  Y   AD+WS+G T++EM     P+  +     L KIA+ E P +  P   S + +
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFK 271
Query: 88  DFILKCLQVNPNDRPTAAQLMEHPFV 113
           DF+ KCL+ N + R T +QL++HPFV
Sbjct: 272 DFLKKCLEKNVDARWTTSQLLQHPFV 297

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 32  SKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDAR 87
           SK+  Y   AD+WS+G T++EM     P+  +     L KIA+ E P +  P   S + +
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFK 271
Query: 88  DFILKCLQVNPNDRPTAAQLMEHPFV 113
           DF+ KCL+ N + R T +QL++HPFV
Sbjct: 272 DFLKKCLEKNVDARWTTSQLLQHPFV 297

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDARDFIL 91
           GY   ADIWS+G T +EM     PY  +    A+F I     P    P+  S +  DF+ 
Sbjct: 201 GYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVK 260
Query: 92  KCLQVNPNDRPTAAQLMEHPFVK 114
           +CL  +P  R TA QL++HPFV+
Sbjct: 261 QCLVKSPEQRATATQLLQHPFVR 283

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVS 83
           +VV  K   YG   DIWS+G   +EM+    PY       AL+ IA    P +  P+ +S
Sbjct: 186 EVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 243
Query: 84  RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 124
              RDF+ +CL+++   R +A +L++H F+K   P S   P
Sbjct: 244 AIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLTP 284

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVS 83
           +VV  K   YG   DIWS+G   +EM+    PY       AL+ IA    P +  P+ +S
Sbjct: 187 EVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 244
Query: 84  RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 124
              RDF+ +CL+++   R +A +L++H F+K   P S   P
Sbjct: 245 AIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLSSLTP 285

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVS 83
           +VV  K   YG   DIWS+G   +EM+    PY       AL+ IA    P +  P+ +S
Sbjct: 187 EVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 244
Query: 84  RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 124
              RDF+ +CL+++   R +A +L++H F+K   P S   P
Sbjct: 245 AIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLSSLTP 285

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVS 83
           +VV  K   YG   DIWS+G   +EM+    PY       AL+ IA    P +  P+ +S
Sbjct: 186 EVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 243
Query: 84  RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 124
              RDF+ +CL ++   R +A +L++H F+K   P S   P
Sbjct: 244 AIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTP 284

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVS 83
           +VV  K   YG   DIWS+G   +EM+    PY       AL+ IA    P +  P+ +S
Sbjct: 186 EVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 243
Query: 84  RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 124
              RDF+ +CL ++   R +A +L++H F+K   P S   P
Sbjct: 244 AIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTP 284

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 36  GYGLPADIWSVGCTVLEMLTRCRPY--FGVEWALFK-IARGELPPIP-DSVSRDARDFIL 91
           GY + +DIWS+G T++E+     PY  +G  +   K +     P +P D  S +  DF  
Sbjct: 233 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTS 292
Query: 92  KCLQVNPNDRPTAAQLMEHPF 112
           +CL+ N  +RPT  +LM+HPF
Sbjct: 293 QCLKKNSKERPTYPELMQHPF 313

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 36  GYGLPADIWSVGCTVLEMLTRCRPY--FGVEWALFK-IARGELPPIP-DSVSRDARDFIL 91
           GY + +DIWS+G T++E+     PY  +G  +   K +     P +P D  S +  DF  
Sbjct: 189 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTS 248
Query: 92  KCLQVNPNDRPTAAQLMEHPF 112
           +CL+ N  +RPT  +LM+HPF
Sbjct: 249 QCLKKNSKERPTYPELMQHPF 269

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFK-IARGELPPIP---DSVSRDARDFILK 92
           YG P D+W  G  +  +L+ C P++G +  LF+ I +G+    P     +S  A+D + +
Sbjct: 210 YGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRR 269
Query: 93  CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTP 126
            L ++P +R T  + + HP++K     ++ +  P
Sbjct: 270 MLMLDPAERITVYEALNHPWLKERDRYAYKIHLP 303

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFI 90
           K   Y   ADIWS+G T +E+     P+  +     LF I +   P +  + S+  ++F+
Sbjct: 192 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFV 251
Query: 91  LKCLQVNPNDRPTAAQLMEHPFVKR 115
             CL   P+ RPTA +L++H F+ R
Sbjct: 252 EACLNKEPSFRPTAKELLKHKFILR 276

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFK-IARGELPPIP---DSVSRDARDFILK 92
           YG P D+W  G  +  +L+ C P++G +  LF+ I +G+    P     +S  A+D + +
Sbjct: 212 YGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRR 271
Query: 93  CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTP 126
            L ++P +R T  + + HP++K     ++ +  P
Sbjct: 272 MLMLDPAERITVYEALNHPWLKERDRYAYKIHLP 305

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFK-IARGELPPIP---DSVSRDARDFILK 92
           YG P D+W  G  +  +L+ C P++G +  LF+ I +G+    P     +S  A+D + +
Sbjct: 210 YGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRR 269
Query: 93  CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTP 126
            L ++P +R T  + + HP++K     ++ +  P
Sbjct: 270 MLMLDPAERITVYEALNHPWLKERDRYAYKIHLP 303

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFI 90
           K   Y   ADIWS+G T +E+     P+  +     LF I +   P +  + S+  ++F+
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFV 236
Query: 91  LKCLQVNPNDRPTAAQLMEHPFVKR 115
             CL   P+ RPTA +L++H F+ R
Sbjct: 237 EACLNKEPSFRPTAKELLKHKFILR 261

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFI 90
           K   Y   ADIWS+G T +E+     P+  +     LF I +   P +  + S+  ++F+
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFV 236
Query: 91  LKCLQVNPNDRPTAAQLMEHPFVKR 115
             CL   P+ RPTA +L++H F+ R
Sbjct: 237 EACLNKEPSFRPTAKELLKHKFILR 261

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFI 90
           K   Y   ADIWS+G T +E+     P+  +     LF I +   P +  + S+  ++F+
Sbjct: 197 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFV 256
Query: 91  LKCLQVNPNDRPTAAQLMEHPFVKR 115
             CL   P+ RPTA +L++H F+ R
Sbjct: 257 EACLNKEPSFRPTAKELLKHKFILR 281

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFI 90
           K   Y   ADIWS+G T +E+     P   +     LF I +   P +    S+  ++F+
Sbjct: 189 KQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQHSKPFKEFV 248
Query: 91  LKCLQVNPNDRPTAAQLMEHPFVKR 115
             CL  +P  RPTA +L++H F+ R
Sbjct: 249 EACLNKDPRFRPTAKELLKHKFITR 273

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDS---VSRDARDFILK 92
           YG   DIWS+G  V+EM+    PYF        K+ R  LPP   +   VS   + F+ +
Sbjct: 247 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 306
Query: 93  CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 124
            L  +P  R TAA+L++HPF+ +  P +  +P
Sbjct: 307 LLVRDPAQRATAAELLKHPFLAKAGPPASIVP 338

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDS---VSRDARDFILK 92
           YG   DIWS+G  V+EM+    PYF        K+ R  LPP   +   VS   + F+ +
Sbjct: 324 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 383
Query: 93  CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 124
            L  +P  R TAA+L++HPF+ +  P +  +P
Sbjct: 384 LLVRDPAQRATAAELLKHPFLAKAGPPASIVP 415

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDS---VSRDARDFILK 92
           YG   DIWS+G  V+EM+    PYF        K+ R  LPP   +   VS   + F+ +
Sbjct: 197 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 256
Query: 93  CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 124
            L  +P  R TAA+L++HPF+ +  P +  +P
Sbjct: 257 LLVRDPAQRATAAELLKHPFLAKAGPPASIVP 288

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDS---VSRDARDFILK 92
           YG   DIWS+G  V+EM+    PYF        K+ R  LPP   +   VS   + F+ +
Sbjct: 202 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 261
Query: 93  CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 124
            L  +P  R TAA+L++HPF+ +  P +  +P
Sbjct: 262 LLVRDPAQRATAAELLKHPFLAKAGPPASIVP 293

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDS---VSRDARDFILK 92
           YG   DIWS+G  V+EM+    PYF        K+ R  LPP   +   VS   + F+ +
Sbjct: 204 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 263
Query: 93  CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 124
            L  +P  R TAA+L++HPF+ +  P +  +P
Sbjct: 264 LLVRDPAQRATAAELLKHPFLAKAGPPASIVP 295

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDS---VSRDARDFILK 92
           YG   DIWS+G  V+EM+    PYF        K+ R  LPP   +   VS   + F+ +
Sbjct: 193 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 252
Query: 93  CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 124
            L  +P  R TAA+L++HPF+ +  P +  +P
Sbjct: 253 LLVRDPAQRATAAELLKHPFLAKAGPPASIVP 284

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF----KIARGELPPIP-DSVSRDARDF 89
            GY   +DIWS+GC + EM     P++G +  L+    KI + + PP+P D  S + R  
Sbjct: 211 NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQL 270
Query: 90  ILKCLQVNPNDRP 102
           +  C+  +P  RP
Sbjct: 271 VNMCINPDPEKRP 283

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 37  YGLPADIWSVGCTVLEMLT--RCRPYFGVEWALFKIARGELPPIPDSV-SRDARDFILKC 93
           Y + +DIWS+G +++EM      RP   +   L  I     P +P +V S + +DF+ KC
Sbjct: 183 YSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKC 242
Query: 94  LQVNPNDRPTAAQLMEHPFVKR 115
           L  NP +R    QLM H F+KR
Sbjct: 243 LIKNPAERADLKQLMVHAFIKR 264

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALFK-IARGELP---PIPDSVSRDARDF 89
           G Y    D+WS G  +  +L+   P++G  E+ + K +  G+     P   ++S DA+D 
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256
Query: 90  ILKCLQVNPNDRPTAAQLMEHPFVKR---PLPTSWGLPT 125
           I K L  +P+ R TA Q +EHP++++     PT   LP+
Sbjct: 257 IRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPS 295

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRDARDFI 90
           +N  Y   +DIW++GC + E+ T    +    ++  + KI  G  PP+    S D R  +
Sbjct: 198 ENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLV 257
Query: 91  LKCLQVNPNDRPTAAQLMEHPFVKR 115
            +  + NP DRP+   ++E  F+ +
Sbjct: 258 SQLFKRNPRDRPSVNSILEKGFIAK 282

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDSVSRDA-------- 86
           GY   ADIWS G T +E+ T   PY       +  +     PP  ++  +D         
Sbjct: 203 GYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGK 262
Query: 87  --RDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
             R  I  CLQ +P  RPTAA+L+ H F ++
Sbjct: 263 SFRKMISLCLQKDPEKRPTAAELLRHKFFQK 293

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV-SRDARDFI 90
           +  Y   +D+WS+G T +EM     P   +    ALF I R   P +     S+  + FI
Sbjct: 208 DATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFI 267
Query: 91  LKCLQVNPNDRPTAAQLMEHPFVK 114
             CL  N + RP   QLM+HPF++
Sbjct: 268 ESCLVKNHSQRPATEQLMKHPFIR 291

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDSVSRDA-------- 86
           GY   ADIWS G T +E+ T   PY       +  +     PP  ++  +D         
Sbjct: 198 GYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGK 257
Query: 87  --RDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
             R  I  CLQ +P  RPTAA+L+ H F ++
Sbjct: 258 SFRKMISLCLQKDPEKRPTAAELLRHKFFQK 288

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGELPPIPDSVSRDARDFILK 92
            +GL +D+WS+GC    +L   RP F    V+  L K+   +   +P  +S +A+D I +
Sbjct: 188 AHGLESDVWSLGCMFYTLLI-GRPPFDTDTVKNTLNKVVLADYE-MPSFLSIEAKDLIHQ 245
Query: 93  CLQVNPNDRPTAAQLMEHPFVKRPLPT 119
            L+ NP DR + + +++HPF+ R   T
Sbjct: 246 LLRRNPADRLSLSSVLDHPFMSRNSST 272

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP-IPD--SVSRDARDFIL 91
           YG   DIWS+G  V+EM+    PYF      A+ +I R  LPP + D   VS   R F+ 
Sbjct: 218 YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRI-RDSLPPRVKDLHKVSSVLRGFLD 276
Query: 92  KCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHHF 129
             L   P+ R TA +L+ HPF+K   P S  +P    +
Sbjct: 277 LMLVREPSQRATAQELLGHPFLKLAGPPSCIVPLMRQY 314

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFI 90
           +   Y   ADIWS+G T +E+     P   +     LF I +   P +    ++  ++FI
Sbjct: 193 QQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFI 252
Query: 91  LKCLQVNPNDRPTAAQLMEHPF-VKRPLPTSW 121
             CL  +P+ RPTA +L++H F VK    TS+
Sbjct: 253 DACLNKDPSFRPTAKELLKHKFIVKNSKKTSY 284

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 36  GYGLPADIWSVGCTVLEMLTRCRPY--FGVEWALFK-IARGELPPIP-DSVSRDARDFIL 91
           GY + +DIWS+G T +E+     PY  +G  +   K +     P +P D  S +  DF  
Sbjct: 216 GYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTS 275
Query: 92  KCLQVNPNDRPTAAQLMEHPF 112
           +CL+ N  +RPT  +L +HPF
Sbjct: 276 QCLKKNSKERPTYPELXQHPF 296

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW---ALFKIARGELPPIPDSV--SRDARDFIL 91
           Y + AD+WS+G +++E+ T   PY   +     L K+ + E P +P  +  S D + F+ 
Sbjct: 206 YDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVK 265
Query: 92  KCLQVNPNDRPTAAQLMEHPFVKR 115
            CL  +   RP   +L+EH F+KR
Sbjct: 266 DCLTKDHRKRPKYNKLLEHSFIKR 289

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-----EWALFKIARGELPPIP---DSVSR 84
           K  GY    DIWS+G  +  ML    P+        E  L +I  G+        ++VS 
Sbjct: 198 KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSE 257
Query: 85  DARDFILKCLQVNPNDRPTAAQLMEHPFV--KRPLPTS 120
            A+D + K L V+P+ R TA Q+++HP+V  K  LP S
Sbjct: 258 TAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQS 295

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-----EWALFKIARGELPPIP---DSVSR 84
           K  GY    DIWS+G  +  ML    P+        E  L +I  G+        ++VS 
Sbjct: 198 KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSE 257
Query: 85  DARDFILKCLQVNPNDRPTAAQLMEHPFV--KRPLPTS 120
            A+D + K L V+P+ R TA Q+++HP+V  K  LP S
Sbjct: 258 TAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQS 295

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 37  YGLPADIWSVGCTVLEMLT------------RCRPYFGVEWALFKIARGELPPIPDSV-S 83
           Y + +DIWS+G +++EM                RP   +   L  I     P +P  V S
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFS 239
Query: 84  RDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
            + +DF+ KCL  NP +R    QLM H F+KR
Sbjct: 240 LEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 271

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR---GELPP-IPDSV-SRDARDF 89
           Y + +DIWS+G +++EM     P        A+F++      E PP +P  V S + +DF
Sbjct: 199 YSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDF 258
Query: 90  ILKCLQVNPNDRPTAAQLMEHPFVKR 115
           + KCL  NP +R    QLM H F+KR
Sbjct: 259 VNKCLIKNPAERADLKQLMVHAFIKR 284

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDS--VSRDARDFILK 92
           Y    DIWS+G  V+EM+    PYF      A+ ++     P + +S  VS   RDF+ +
Sbjct: 218 YATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLER 277
Query: 93  CLQVNPNDRPTAAQLMEHPFV 113
            L  +P +R TA +L++HPF+
Sbjct: 278 MLVRDPQERATAQELLDHPFL 298

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALFK-IARGELP-PIPD--SVSRDARDF 89
           G Y    D+WS G  +  +L+   P++G  E+ + K +  G+    +P   ++S DA+D 
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256
Query: 90  ILKCLQVNPNDRPTAAQLMEHPFVKR 115
           I K L  +P+ R TA Q +EHP++++
Sbjct: 257 IRKMLTFHPSLRITATQCLEHPWIQK 282

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALFK-IARGELP-PIPD--SVSRDARDF 89
           G Y    D+WS G  +  +L+   P++G  E+ + K +  G+    +P   ++S DA+D 
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256
Query: 90  ILKCLQVNPNDRPTAAQLMEHPFVKR 115
           I K L  +P+ R TA Q +EHP++++
Sbjct: 257 IRKMLTFHPSLRITATQCLEHPWIQK 282

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGV-----EWALFKIARGELPPIP---DSVSRDAR 87
           GY    DIWS+G  +  MLT   P+        E  L +I  G+        +SVS  A+
Sbjct: 196 GYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAK 255
Query: 88  DFILKCLQVNPNDRPTAAQLMEHPFV 113
           D + K L V+P+ R TAA ++ HP++
Sbjct: 256 DLVSKMLHVDPHQRLTAALVLRHPWI 281

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 36  GYGLPADIWSVGCTVLEMLTRCRPY---FGVEWALFKIARGELPPIPDSVSRDAR----D 88
           GY + +D+WS+G T+ E+ T   PY     V   L ++ +G+ P + +S  R+      +
Sbjct: 205 GYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFIN 264
Query: 89  FILKCLQVNPNDRPTAAQLMEHPFV 113
           F+  CL  + + RP   +L++HPF+
Sbjct: 265 FVNLCLTKDESKRPKYKELLKHPFI 289

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELP-PIPDSVSRDARDFIL 91
           YG P D+W+ G  +  +L    P++  +    +   K    + P P  D+V+ +A+D I 
Sbjct: 190 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 249
Query: 92  KCLQVNPNDRPTAAQLMEHPFV 113
           K L +NP+ R TAA+ ++HP++
Sbjct: 250 KMLTINPSKRITAAEALKHPWI 271

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF--KIARGEL---PPIPDSVSRDARDFI 90
           GYG   D+W+ G  +  +L    P++     L    I  G+     P  D  S   +D I
Sbjct: 281 GYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLI 340
Query: 91  LKCLQVNPNDRPTAAQLMEHPFVKR 115
            + LQV+P  R TA Q ++HPF +R
Sbjct: 341 SRLLQVDPEARLTAEQALQHPFFER 365

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELP-PIPDSVSRDARDFIL 91
           YG P D+W+ G  +  +L    P++  +    +   K    + P P  D+V+ +A+D I 
Sbjct: 201 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 260
Query: 92  KCLQVNPNDRPTAAQLMEHPFV 113
           K L +NP+ R TAA+ ++HP++
Sbjct: 261 KMLTINPSKRITAAEALKHPWI 282

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEW-ALFKIARGELPPIPDSVSRDARDFILKCLQV 96
           G   DIWS G  +  +L    P+       LFK  RG +  IP+ ++R     ++  LQV
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQV 248
Query: 97  NPNDRPTAAQLMEHPFVKRPLPT 119
           +P  R T   + EH + K+ LP+
Sbjct: 249 DPLKRATIKDIREHEWFKQDLPS 271

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEW-ALFKIARGELPPIPDSVSRDARDFILKCLQV 96
           G   DIWS G  +  +L    P+       LFK  RG +  IP+ ++R     ++  LQV
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQV 248
Query: 97  NPNDRPTAAQLMEHPFVKRPLPT 119
           +P  R T   + EH + K+ LP+
Sbjct: 249 DPLKRATIKDIREHEWFKQDLPS 271

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
            D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ N 
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFT-FPDFVTEGARDLISRLLKHNA 249
Query: 99  NDRPTAAQLMEHPFVK 114
           + R T A+++EHP++K
Sbjct: 250 SQRLTLAEVLEHPWIK 265

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
            D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ N 
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFT-FPDFVTEGARDLISRLLKHNA 249
Query: 99  NDRPTAAQLMEHPFVK 114
           + R T A+++EHP++K
Sbjct: 250 SQRLTLAEVLEHPWIK 265

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
           D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 247
Query: 100 DRPTAAQLMEHPFV 113
            RP   +++EHP++
Sbjct: 248 QRPMLREVLEHPWI 261

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
            D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNP 248
Query: 99  NDRPTAAQLMEHPFV 113
           + RP   +++EHP++
Sbjct: 249 SQRPMLREVLEHPWI 263

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
           D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 251
Query: 100 DRPTAAQLMEHPFV 113
            RP   +++EHP++
Sbjct: 252 QRPXLREVLEHPWI 265

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
           D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 251
Query: 100 DRPTAAQLMEHPFV 113
            RP   +++EHP++
Sbjct: 252 QRPMLREVLEHPWI 265

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
            D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP
Sbjct: 191 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNP 249
Query: 99  NDRPTAAQLMEHPFV 113
           + RP   +++EHP++
Sbjct: 250 SQRPMLREVLEHPWI 264

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
           D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 214 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 272
Query: 100 DRPTAAQLMEHPFV 113
            RP   +++EHP++
Sbjct: 273 QRPMLREVLEHPWI 286

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
           D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 190 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 248
Query: 100 DRPTAAQLMEHPFV 113
            RP   +++EHP++
Sbjct: 249 QRPMLREVLEHPWI 262

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
            D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNP 245
Query: 99  NDRPTAAQLMEHPFV 113
           + RP   +++EHP++
Sbjct: 246 SQRPMLREVLEHPWI 260

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
            D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP
Sbjct: 186 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNP 244
Query: 99  NDRPTAAQLMEHPFV 113
           + RP   +++EHP++
Sbjct: 245 SQRPMLREVLEHPWI 259

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
            D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNP 245
Query: 99  NDRPTAAQLMEHPFV 113
           + RP   +++EHP++
Sbjct: 246 SQRPMLREVLEHPWI 260

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
           D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 205 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 263
Query: 100 DRPTAAQLMEHPFV 113
            RP   +++EHP++
Sbjct: 264 QRPMLREVLEHPWI 277

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
           D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 251
Query: 100 DRPTAAQLMEHPFV 113
            RP   +++EHP++
Sbjct: 252 QRPMLREVLEHPWI 265

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
           D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 249
Query: 100 DRPTAAQLMEHPFV 113
            RP   +++EHP++
Sbjct: 250 QRPMLREVLEHPWI 263

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
           D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 214 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 272
Query: 100 DRPTAAQLMEHPFV 113
            RP   +++EHP++
Sbjct: 273 QRPMLREVLEHPWI 286

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
           D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 246
Query: 100 DRPTAAQLMEHPFV 113
            RP   +++EHP++
Sbjct: 247 QRPMLREVLEHPWI 260

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
           D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 251
Query: 100 DRPTAAQLMEHPFV 113
            RP   +++EHP++
Sbjct: 252 QRPMLREVLEHPWI 265

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
           D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 246
Query: 100 DRPTAAQLMEHPFV 113
            RP   +++EHP++
Sbjct: 247 QRPMLREVLEHPWI 260

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
            D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNP 248
Query: 99  NDRPTAAQLMEHPFV 113
           + RP   +++EHP++
Sbjct: 249 SQRPMLREVLEHPWI 263

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
           D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 246
Query: 100 DRPTAAQLMEHPFV 113
            RP   +++EHP++
Sbjct: 247 QRPMLREVLEHPWI 260

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
            D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNP 248
Query: 99  NDRPTAAQLMEHPFV 113
           + RP   +++EHP++
Sbjct: 249 SQRPMLREVLEHPWI 263

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
           D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 247
Query: 100 DRPTAAQLMEHPFV 113
            RP   +++EHP++
Sbjct: 248 QRPMLREVLEHPWI 261

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
           D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 247
Query: 100 DRPTAAQLMEHPFV 113
            RP   +++EHP++
Sbjct: 248 QRPMLREVLEHPWI 261

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
            D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNP 248
Query: 99  NDRPTAAQLMEHPFV 113
           + RP   +++EHP++
Sbjct: 249 SQRPMLREVLEHPWI 263

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
            D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNP 245
Query: 99  NDRPTAAQLMEHPFV 113
           + RP   +++EHP++
Sbjct: 246 SQRPMLREVLEHPWI 260

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
           D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 249
Query: 100 DRPTAAQLMEHPFV 113
            RP   +++EHP++
Sbjct: 250 QRPMLREVLEHPWI 263

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
           D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 246
Query: 100 DRPTAAQLMEHPFV 113
            RP   +++EHP++
Sbjct: 247 QRPMLREVLEHPWI 260

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
           D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 190 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 248
Query: 100 DRPTAAQLMEHPFV 113
            RP   +++EHP++
Sbjct: 249 QRPMLREVLEHPWI 262

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
            D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP
Sbjct: 184 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNP 242
Query: 99  NDRPTAAQLMEHPFV 113
           + RP   +++EHP++
Sbjct: 243 SQRPMLREVLEHPWI 257

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
           D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 251
Query: 100 DRPTAAQLMEHPFV 113
            RP   +++EHP++
Sbjct: 252 QRPMLREVLEHPWI 265

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGV-----EWALFKIARGELPPIP---DSVSRDAR 87
           GY    DIWS+G  +   LT   P+        E  L +I  G+        +SVS  A+
Sbjct: 196 GYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAK 255
Query: 88  DFILKCLQVNPNDRPTAAQLMEHPFV 113
           D + K L V+P+ R TAA ++ HP++
Sbjct: 256 DLVSKXLHVDPHQRLTAALVLRHPWI 281

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 34  NGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWALFKIARGELPP-IPDSVSRDARDFIL 91
            G YG  AD++S+G T+LE+      P+ G  W   ++ +G LPP     +S + R  ++
Sbjct: 229 QGSYGTAADVFSLGLTILEVACNMELPHGGEGWQ--QLRQGYLPPEFTAGLSSELRSVLV 286
Query: 92  KCLQVNPNDRPTAAQLMEHPFVKRP 116
             L+ +P  R TA  L+  P +++P
Sbjct: 287 MMLEPDPKLRATAEALLALPVLRQP 311

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
           D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 246
Query: 100 DRPTAAQLMEHPFV 113
            RP   +++EHP++
Sbjct: 247 QRPMLREVLEHPWI 260

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFG-VEWALF-KIARGEL---PPIPDSVSRDARDFIL 91
           Y    D WS+G     +L    P++   E  LF KI  G      P  D +S  A+DFI 
Sbjct: 184 YSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFIC 243
Query: 92  KCLQVNPNDRPTAAQLMEHPFV 113
             L+ +PN+R T  + + HP++
Sbjct: 244 HLLEKDPNERYTCEKALSHPWI 265

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 57/140 (40%), Gaps = 34/140 (24%)
Query: 8   GLGNALRRKWH--VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW 65
             G  +R+  H  V+ W    D ++ SK   Y    DIWSVGC   EM+     + GV  
Sbjct: 149 AFGIPVRKYTHEVVTLWYRAPDVLMGSKK--YSTTIDIWSVGCIFAEMVNGAPLFPGVSE 206
Query: 66  A--LFKIAR-------------GELP----------PIP-----DSVSRDARDFILKCLQ 95
           A  L +I R              ELP          P+P       +     D + K L+
Sbjct: 207 ADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLK 266
Query: 96  VNPNDRPTAAQLMEHPFVKR 115
           ++PN R TA Q +EH + K 
Sbjct: 267 LDPNQRITAKQALEHAYFKE 286

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 57/140 (40%), Gaps = 34/140 (24%)
Query: 8   GLGNALRRKWH--VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW 65
             G  +R+  H  V+ W    D ++ SK   Y    DIWSVGC   EM+     + GV  
Sbjct: 149 AFGIPVRKYTHEIVTLWYRAPDVLMGSKK--YSTTIDIWSVGCIFAEMVNGTPLFPGVSE 206
Query: 66  A--LFKIAR-------------GELP----------PIP-----DSVSRDARDFILKCLQ 95
           A  L +I R              ELP          P+P       +     D + K L+
Sbjct: 207 ADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLK 266
Query: 96  VNPNDRPTAAQLMEHPFVKR 115
           ++PN R TA Q +EH + K 
Sbjct: 267 LDPNQRITAKQALEHAYFKE 286

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELP-PIPDSVSRDARDFIL 91
           YG P D+W+ G  +  +L    P++  +    +   K    + P P  D+V+ +A+D I 
Sbjct: 183 YGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 242
Query: 92  KCLQVNPNDRPTAAQLMEHPFV 113
           K L +NP  R TA++ ++HP++
Sbjct: 243 KMLTINPAKRITASEALKHPWI 264

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 57/140 (40%), Gaps = 34/140 (24%)
Query: 8   GLGNALRRKWH--VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW 65
             G  +R+  H  V+ W    D ++ SK   Y    DIWSVGC   EM+     + GV  
Sbjct: 149 AFGIPVRKYTHEVVTLWYRAPDVLMGSKK--YSTTIDIWSVGCIFAEMVNGTPLFPGVSE 206
Query: 66  A--LFKIAR-------------GELP----------PIP-----DSVSRDARDFILKCLQ 95
           A  L +I R              ELP          P+P       +     D + K L+
Sbjct: 207 ADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLK 266
Query: 96  VNPNDRPTAAQLMEHPFVKR 115
           ++PN R TA Q +EH + K 
Sbjct: 267 LDPNQRITAKQALEHAYFKE 286

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELP-PIPDSVSRDARDFIL 91
           YG P D+W+ G  +  +L    P++  +    +   K    + P P  D+V+ +A+D I 
Sbjct: 183 YGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 242
Query: 92  KCLQVNPNDRPTAAQLMEHPFV 113
           K L +NP  R TA++ ++HP++
Sbjct: 243 KMLTINPAKRITASEALKHPWI 264

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 14  RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIA 71
           R+K      N +  +V++ K  G+    D+WS+GC +  +L    P+    ++    +I 
Sbjct: 177 RKKTLCGTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK 234
Query: 72  RGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
           + E   IP  ++  A   I K LQ +P  RPT  +L+   F
Sbjct: 235 KNEY-SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 274

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 14  RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIA 71
           R+K      N +  +V++ K  G+    D+WS+GC +  +L    P+    ++    +I 
Sbjct: 173 RKKTLCGTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK 230
Query: 72  RGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
           + E   IP  ++  A   I K LQ +P  RPT  +L+   F
Sbjct: 231 KNEY-SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 270

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 14  RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIA 71
           R+K      N +  +V++ K  G+    D+WS+GC +  +L    P+    ++    +I 
Sbjct: 197 RKKVLCGTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK 254
Query: 72  RGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
           + E   IP  ++  A   I K LQ +P  RPT  +L+   F
Sbjct: 255 KNEY-SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 294

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 14  RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIA 71
           R+K      N +  +V++ K  G+    D+WS+GC +  +L    P+    ++    +I 
Sbjct: 173 RKKTLCGTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK 230
Query: 72  RGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
           + E   IP  ++  A   I K LQ +P  RPT  +L+   F
Sbjct: 231 KNEY-SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 270

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 14  RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIA 71
           R+K      N +  +V++ K  G+    D+WS+GC +  +L    P+    ++    +I 
Sbjct: 195 RKKVLCGTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK 252
Query: 72  RGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
           + E   IP  ++  A   I K LQ +P  RPT  +L+   F
Sbjct: 253 KNEY-SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 292

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGV--EWALFKIARGEL---PPIPDSVSRDARDFIL 91
           Y    D+WS+G  +  +L    P+ G   +  L K+ +G+     P   +VS  A+D I 
Sbjct: 214 YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIK 273
Query: 92  KCLQVNPNDRPTAAQLMEHPFVK 114
           + LQ +   R +A Q +EHP++K
Sbjct: 274 QMLQFDSQRRISAQQALEHPWIK 296

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 14  RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIA 71
           R+K      N +  +V++ K  G+    D+WS+GC +  +L    P+    ++    +I 
Sbjct: 171 RKKVLCGTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK 228
Query: 72  RGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
           + E   IP  ++  A   I K LQ +P  RPT  +L+   F
Sbjct: 229 KNEY-SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 268

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIARGELPPIP---DSVSRDARDF 89
            YG   D+WSVG     +L    P++   G ++   +I   E   I    D VS +A+D 
Sbjct: 226 AYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDL 285
Query: 90  ILKCLQVNPNDRPTAAQLMEHPFV 113
           + K + ++P  R T  Q ++HP+V
Sbjct: 286 VRKLIVLDPKKRLTTFQALQHPWV 309

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPY--FGVEWALFKIARGELPPIPDSVSRDARDFILKCL 94
           Y   +DIWS+GC + E+     P+  F  +    KI  G+   IP   S +  + I + L
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRML 252
Query: 95  QVNPNDRPTAAQLMEHPFV 113
            +    RP+  +++E+P +
Sbjct: 253 NLKDYHRPSVEEILENPLI 271

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPY--FGVEWALFKIARGELPPIPDSVSRDARDFILKCL 94
           Y   +DIWS+GC + E+     P+  F  +    KI  G+   IP   S +  + I + L
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRML 252
Query: 95  QVNPNDRPTAAQLMEHPFV 113
            +    RP+  +++E+P +
Sbjct: 253 NLKDYHRPSVEEILENPLI 271

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPY--FGVEWALFKIARGELPPIPDSVSRDARDFILKCL 94
           Y   +DIWS+GC + E+     P+  F  +    KI  G+   IP   S +  + I + L
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRML 252
Query: 95  QVNPNDRPTAAQLMEHPFV 113
            +    RP+  +++E+P +
Sbjct: 253 NLKDYHRPSVEEILENPLI 271

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELP-PIPDSVSRDARDFIL 91
           YG P DIW+ G  +  +L    P++  +    +   K    + P P  D+V+ +A++ I 
Sbjct: 210 YGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLIN 269
Query: 92  KCLQVNPNDRPTAAQLMEHPFV 113
           + L +NP  R TA Q ++HP+V
Sbjct: 270 QMLTINPAKRITADQALKHPWV 291

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 53/131 (40%), Gaps = 40/131 (30%)
Query: 20  SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT------------------------ 55
           +RW    + ++NSK  GY    DIWSVGC + EML+                        
Sbjct: 210 TRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 267
Query: 56  -----------RCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTA 104
                      + R Y     +  K+A  +L P  DS    A D + + L  NPN R T 
Sbjct: 268 SQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDS---KALDLLDRMLTFNPNKRITV 324
Query: 105 AQLMEHPFVKR 115
            + + HP++++
Sbjct: 325 EEALAHPYLEQ 335

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELP-PIPDSVSRDAR 87
           +   YG P DIW+ G  +  +L    P++  +    +   K    + P P  D+V+ +A+
Sbjct: 179 RKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 88  DFILKCLQVNPNDRPTAAQLMEHPFV 113
           + I + L +NP  R TA + ++HP+V
Sbjct: 239 NLINQMLTINPAKRITAHEALKHPWV 264

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 59/159 (37%), Gaps = 38/159 (23%)
Query: 7   EGLGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW- 65
           E   +A +  +   RW    + V+  K  G+    D+WS GC + EM  R   + G  + 
Sbjct: 183 EDTADANKTHYVTHRWYRAPELVMQFK--GFTKLVDMWSAGCVMAEMFNRKALFRGSTFY 240
Query: 66  -ALFKIARGE-LPPIPDSV------SRD------------------------ARDFILKC 93
             L KI      P I D V      +RD                        A D I K 
Sbjct: 241 NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKM 300
Query: 94  LQVNPNDRPTAAQLMEHPFVKR---PLPTSWGLPTPHHF 129
           L+ NP  R +  Q + HP+ +    PL  + GL    HF
Sbjct: 301 LEFNPQRRISTEQALRHPYFESLFDPLDLTEGLSERFHF 339

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARG----ELPPIPDSVSRDAR 87
           +G Y    D+WS G  +  +L+ C P+ G  E+ +  K+ +G    ELP     VS  A+
Sbjct: 201 HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW-KKVSESAK 259
Query: 88  DFILKCLQVNPNDRPTAAQLMEHPFVK 114
           D I K L   P+ R +A   ++H +++
Sbjct: 260 DLIRKXLTYVPSXRISARDALDHEWIQ 286

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F  +  L ++     
Sbjct: 206 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 262
Query: 71  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 263 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 322
Query: 103 TAAQLMEHPFVKR 115
              Q + HP++++
Sbjct: 323 EVEQALAHPYLEQ 335

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 59/159 (37%), Gaps = 38/159 (23%)
Query: 7   EGLGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW- 65
           E   +A +  +   RW    + V+  K  G+    D+WS GC + EM  R   + G  + 
Sbjct: 183 EDTADANKTHYVTHRWYRAPELVMQFK--GFTKLVDMWSAGCVMAEMFNRKALFRGSTFY 240
Query: 66  -ALFKIARGE-LPPIPDSV------SRD------------------------ARDFILKC 93
             L KI      P I D V      +RD                        A D I K 
Sbjct: 241 NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKM 300
Query: 94  LQVNPNDRPTAAQLMEHPFVKR---PLPTSWGLPTPHHF 129
           L+ NP  R +  Q + HP+ +    PL  + GL    HF
Sbjct: 301 LEFNPQRRISTEQALRHPYFESLFDPLDLTEGLSERFHF 339

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F  +  L ++     
Sbjct: 190 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 246
Query: 71  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 247 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 306
Query: 103 TAAQLMEHPFVKR 115
              Q + HP++++
Sbjct: 307 EVEQALAHPYLEQ 319

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F  +  L ++     
Sbjct: 206 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 262
Query: 71  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 263 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 322
Query: 103 TAAQLMEHPFVKR 115
              Q + HP++++
Sbjct: 323 EVEQALAHPYLEQ 335

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F  +  L ++     
Sbjct: 194 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 250
Query: 71  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 251 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 310
Query: 103 TAAQLMEHPFVKR 115
              Q + HP++++
Sbjct: 311 EVEQALAHPYLEQ 323

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F  +  L ++     
Sbjct: 186 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 242
Query: 71  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 243 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 302
Query: 103 TAAQLMEHPFVKR 115
              Q + HP++++
Sbjct: 303 EVEQALAHPYLEQ 315

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F  +  L ++     
Sbjct: 186 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 242
Query: 71  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 243 ILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 302
Query: 103 TAAQLMEHPFVKR 115
              Q + HP++++
Sbjct: 303 EVEQALAHPYLEQ 315

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 32/110 (29%)
Query: 37  YGLPADIWSVGCTVLEMLT-----RCRPYF----------GVEWALF------KIARGEL 75
           Y    DIWSVGC + EMLT     + + Y           GV    F      K A+  +
Sbjct: 201 YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYI 260
Query: 76  PPIPDSVSRD-----------ARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
             +P +  +D           A D + K L+++ + R TAAQ + HPF +
Sbjct: 261 QSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F  +  L ++     
Sbjct: 184 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 240
Query: 71  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 241 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 300
Query: 103 TAAQLMEHPFVKR 115
              Q + HP++++
Sbjct: 301 EVEQALAHPYLEQ 313

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F  +  L ++     
Sbjct: 190 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 246
Query: 71  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 247 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 306
Query: 103 TAAQLMEHPFVKR 115
              Q + HP++++
Sbjct: 307 EVEQALAHPYLEQ 319

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 32/110 (29%)
Query: 37  YGLPADIWSVGCTVLEMLT-----RCRPYF----------GVEWALF------KIARGEL 75
           Y    DIWSVGC + EMLT     + + Y           GV    F      K A+  +
Sbjct: 219 YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYI 278
Query: 76  PPIPDSVSRD-----------ARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
             +P +  +D           A D + K L+++ + R TAAQ + HPF +
Sbjct: 279 QSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 328

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F  +  L ++     
Sbjct: 186 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 242
Query: 71  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 243 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 302
Query: 103 TAAQLMEHPFVKR 115
              Q + HP++++
Sbjct: 303 EVEQALAHPYLEQ 315

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F  +  L ++     
Sbjct: 188 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 244
Query: 71  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 245 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 304
Query: 103 TAAQLMEHPFVKR 115
              Q + HP++++
Sbjct: 305 EVEQALAHPYLEQ 317

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F  +  L ++     
Sbjct: 186 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 242
Query: 71  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 243 ILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 302
Query: 103 TAAQLMEHPFVKR 115
              Q + HP++++
Sbjct: 303 EVEQALAHPYLEQ 315

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F  +  L ++     
Sbjct: 184 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 240
Query: 71  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 241 ILGSPEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 300
Query: 103 TAAQLMEHPFVKR 115
              Q + HP++++
Sbjct: 301 EVEQALAHPYLEQ 313

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F  +  L ++     
Sbjct: 190 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 246
Query: 71  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 247 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 306
Query: 103 TAAQLMEHPFVKR 115
              Q + HP++++
Sbjct: 307 EVEQALAHPYLEQ 319

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F  +  L ++     
Sbjct: 191 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 247
Query: 71  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 248 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 307
Query: 103 TAAQLMEHPFVKR 115
              Q + HP++++
Sbjct: 308 EVEQALAHPYLEQ 320

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F  +  L ++     
Sbjct: 192 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 248
Query: 71  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 249 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 308
Query: 103 TAAQLMEHPFVKR 115
              Q + HP++++
Sbjct: 309 EVEQALAHPYLEQ 321

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F  +  L ++     
Sbjct: 183 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 239
Query: 71  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 240 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 299
Query: 103 TAAQLMEHPFVKR 115
              Q + HP++++
Sbjct: 300 EVEQALAHPYLEQ 312

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F  +  L ++     
Sbjct: 190 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 246
Query: 71  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 247 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 306
Query: 103 TAAQLMEHPFVKR 115
              Q + HP++++
Sbjct: 307 EVEQALAHPYLEQ 319

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F  +  L ++     
Sbjct: 186 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 242
Query: 71  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 243 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 302
Query: 103 TAAQLMEHPFVKR 115
              Q + HP++++
Sbjct: 303 EVEQALAHPYLEQ 315

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F  +  L ++     
Sbjct: 190 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 246
Query: 71  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 247 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 306
Query: 103 TAAQLMEHPFVKR 115
              Q + HP++++
Sbjct: 307 EVEQALAHPYLEQ 319

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARG----ELPPIPDSVSRDAR 87
           +G Y    D+WS G  +  +L+ C P+ G  E+ +  K+ +G    ELP     VS  A+
Sbjct: 224 HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW-KKVSESAK 282
Query: 88  DFILKCLQVNPNDRPTAAQLMEHPFVK 114
           D I K L   P+ R +A   ++H +++
Sbjct: 283 DLIRKMLTYVPSMRISARDALDHEWIQ 309

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARG----ELPPIPDSVSRDAR 87
           +G Y    D+WS G  +  +L+ C P+ G  E+ +  K+ +G    ELP     VS  A+
Sbjct: 201 HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW-KKVSESAK 259
Query: 88  DFILKCLQVNPNDRPTAAQLMEHPFVK 114
           D I K L   P+ R +A   ++H +++
Sbjct: 260 DLIRKMLTYVPSMRISARDALDHEWIQ 286

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARG----ELPPIPDSVSRDAR 87
           +G Y    D+WS G  +  +L+ C P+ G  E+ +  K+ +G    ELP     VS  A+
Sbjct: 225 HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW-KKVSESAK 283
Query: 88  DFILKCLQVNPNDRPTAAQLMEHPFVK 114
           D I K L   P+ R +A   ++H +++
Sbjct: 284 DLIRKMLTYVPSMRISARDALDHEWIQ 310

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 36/129 (27%)
Query: 20  SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI--------- 70
           +RW    + ++NSK  GY    DIWSVGC + EML+  RP F  +  L ++         
Sbjct: 194 TRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGS 250
Query: 71  -------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRPTAAQ 106
                        AR  L  +P            +    A D + K L  NP+ R    Q
Sbjct: 251 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 310
Query: 107 LMEHPFVKR 115
            + HP++++
Sbjct: 311 ALAHPYLEQ 319

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 36/129 (27%)
Query: 20  SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI--------- 70
           +RW    + ++NSK  GY    DIWSVGC + EML+  RP F  +  L ++         
Sbjct: 195 TRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGS 251
Query: 71  -------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRPTAAQ 106
                        AR  L  +P            +    A D + K L  NP+ R    Q
Sbjct: 252 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 311
Query: 107 LMEHPFVKR 115
            + HP++++
Sbjct: 312 ALAHPYLEQ 320

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPD---SVSRDARDFILK 92
           GL AD+WS+G     +L+   P+ G   +  L  I+        +   + S  A+DFI +
Sbjct: 189 GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRR 248
Query: 93  CLQVNPNDRPTAAQLMEHPFVK 114
            L  +P  R T AQ +EH ++K
Sbjct: 249 LLVKDPKRRMTIAQSLEHSWIK 270

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 30  VNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF--KIARGEL---PPIPDSVSR 84
           +N  + GYG   D+WS G  +  +L    P++  +  L    I  G      P  D  S 
Sbjct: 199 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSD 258
Query: 85  DARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
             +D + + L V P  R TA + + HPF ++
Sbjct: 259 TVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 36/133 (27%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F  +  L ++     
Sbjct: 188 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 244
Query: 71  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 245 ILGSPSQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 304
Query: 103 TAAQLMEHPFVKR 115
              Q + HP++ +
Sbjct: 305 EVEQALAHPYLAQ 317

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 30  VNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF--KIARGEL---PPIPDSVSR 84
           +N  + GYG   D+WS G  +  +L    P++  +  L    I  G      P  D  S 
Sbjct: 199 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSD 258
Query: 85  DARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
             +D + + L V P  R TA + + HPF ++
Sbjct: 259 TVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 36/133 (27%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F  +  L ++     
Sbjct: 188 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 244
Query: 71  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 245 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 304
Query: 103 TAAQLMEHPFVKR 115
              Q + HP++ +
Sbjct: 305 EVEQALAHPYLAQ 317

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARGELP---PIPDSVSRDARDFIL 91
           Y    D WS+G     +L    P++   +  LF +I + E     P  D +S  A+DFI 
Sbjct: 199 YSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIR 258
Query: 92  KCLQVNPNDRPTAAQLMEHPFV 113
             ++ +PN R T  Q   HP++
Sbjct: 259 NLMEKDPNKRYTCEQAARHPWI 280

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWALFKIA-------RGELPPIPDSVSRDARDFILKCL 94
           D+WS+GC +  M     P+  +   + K+          E P IP+   +D +D +  CL
Sbjct: 202 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE---KDLQDVLKCCL 258
Query: 95  QVNPNDRPTAAQLMEHPFVK 114
           + +P  R +  +L+ HP+V+
Sbjct: 259 KRDPKQRISIPELLAHPYVQ 278

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 30  VNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF--KIARGEL---PPIPDSVSR 84
           +N  + GYG   D+WS G  +  +L    P++  +  L    I  G      P  D  S 
Sbjct: 186 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSD 245
Query: 85  DARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
             +D + + L V P  R TA + + HPF ++
Sbjct: 246 TVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWALFKIA-------RGELPPIPDSVSRDARDFILKCL 94
           D+WS+GC +  M     P+  +   + K+          E P IP+   +D +D +  CL
Sbjct: 249 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE---KDLQDVLKCCL 305
Query: 95  QVNPNDRPTAAQLMEHPFVK 114
           + +P  R +  +L+ HP+V+
Sbjct: 306 KRDPKQRISIPELLAHPYVQ 325

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 35  GGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFIL 91
           G Y   +D+WS G TV E++T    PY G+  A     + +GE    P   + D    ++
Sbjct: 192 GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMV 251
Query: 92  KCLQVNPNDRPTAAQL 107
           KC  ++ N RPT  +L
Sbjct: 252 KCWMIDENIRPTFKEL 267

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWALFKIA-------RGELPPIPDSVSRDARDFILKCL 94
           D+WS+GC +  M     P+  +   + K+          E P IP+   +D +D +  CL
Sbjct: 249 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE---KDLQDVLKCCL 305
Query: 95  QVNPNDRPTAAQLMEHPFVK 114
           + +P  R +  +L+ HP+V+
Sbjct: 306 KRDPKQRISIPELLAHPYVQ 325

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 35  GGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFIL 91
           G Y   +D+WS G TV E++T    PY G+  A     + +GE    P   + D    ++
Sbjct: 210 GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMV 269
Query: 92  KCLQVNPNDRPTAAQL 107
           KC  ++ N RPT  +L
Sbjct: 270 KCWMIDENIRPTFKEL 285

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWALFKIA-------RGELPPIPDSVSRDARDFILKCL 94
           D+WS+GC +  M     P+  +   + K+          E P IP+   +D +D +  CL
Sbjct: 221 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE---KDLQDVLKCCL 277
Query: 95  QVNPNDRPTAAQLMEHPFVK 114
           + +P  R +  +L+ HP+V+
Sbjct: 278 KRDPKQRISIPELLAHPYVQ 297

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWALFKIA-------RGELPPIPDSVSRDARDFILKCL 94
           D+WS+GC +  M     P+  +   + K+          E P IP+   +D +D +  CL
Sbjct: 221 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE---KDLQDVLKCCL 277
Query: 95  QVNPNDRPTAAQLMEHPFVK 114
           + +P  R +  +L+ HP+V+
Sbjct: 278 KRDPKQRISIPELLAHPYVQ 297

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 19/88 (21%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFG------------VEWALFKIARGELPPIPDSVSRD 85
           G   D+WSVG     +L+   P+ G             +W +   A          +S D
Sbjct: 228 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFS-------GISED 280
Query: 86  ARDFILKCLQVNPNDRPTAAQLMEHPFV 113
            +DFI K L  +PN R T  Q +EHP++
Sbjct: 281 GKDFIRKLLLADPNTRMTIHQALEHPWL 308

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWALFKIA-------RGELPPIPDSVSRDARDFILKCL 94
           D+WS+GC +  M     P+  +   + K+          E P IP+   +D +D +  CL
Sbjct: 205 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE---KDLQDVLKCCL 261
Query: 95  QVNPNDRPTAAQLMEHPFVK 114
           + +P  R +  +L+ HP+V+
Sbjct: 262 KRDPKQRISIPELLAHPYVQ 281

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWALFKIA-------RGELPPIPDSVSRDARDFILKCL 94
           D+WS+GC +  M     P+  +   + K+          E P IP+   +D +D +  CL
Sbjct: 201 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE---KDLQDVLKCCL 257
Query: 95  QVNPNDRPTAAQLMEHPFVK 114
           + +P  R +  +L+ HP+V+
Sbjct: 258 KRDPKQRISIPELLAHPYVQ 277

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 19/88 (21%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFG------------VEWALFKIARGELPPIPDSVSRD 85
           G   D+WSVG     +L+   P+ G             +W +   A          +S D
Sbjct: 334 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFS-------GISED 386
Query: 86  ARDFILKCLQVNPNDRPTAAQLMEHPFV 113
            +DFI K L  +PN R T  Q +EHP++
Sbjct: 387 GKDFIRKLLLADPNTRMTIHQALEHPWL 414

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWALFKIA-------RGELPPIPDSVSRDARDFILKCL 94
           D+WS+GC +  M     P+  +   + K+          E P IP+   +D +D +  CL
Sbjct: 249 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE---KDLQDVLKCCL 305
Query: 95  QVNPNDRPTAAQLMEHPFVK 114
           + +P  R +  +L+ HP+V+
Sbjct: 306 KRDPKQRISIPELLAHPYVQ 325

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  + E+ T+ R PY G+     L ++ RG   P P        D + 
Sbjct: 357 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 416
Query: 92  KCLQVNPNDRPTAAQL 107
           +C + +P +RPT   L
Sbjct: 417 QCWRKDPEERPTFEYL 432

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARG----ELPPIPDSVSRDAR 87
           +G Y    D+WS G  +  +L+ C P+ G  E+ +  K+ +G    ELP     VS  A+
Sbjct: 207 HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK-KVSESAK 265
Query: 88  DFILKCLQVNPNDRPTAAQLMEHPFVK 114
           D I K L   P+ R +A   ++H +++
Sbjct: 266 DLIRKMLTYVPSMRISARDALDHEWIQ 292

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  + E+ T+ R PY G+     L ++ RG   P P        D + 
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 92  KCLQVNPNDRPTAAQL 107
           +C + +P +RPT   L
Sbjct: 250 QCWRKDPEERPTFEYL 265

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  + E+ T+ R PY G+     L ++ RG   P P        D + 
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 92  KCLQVNPNDRPTAAQL 107
           +C + +P +RPT   L
Sbjct: 250 QCWRKDPEERPTFEYL 265

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  + E+ T+ R PY G+     L ++ RG   P P        D + 
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 92  KCLQVNPNDRPTAAQL 107
           +C + +P +RPT   L
Sbjct: 250 QCWRKDPEERPTFEYL 265

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  + E+ T+ R PY G+     L ++ RG   P P        D + 
Sbjct: 179 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 238
Query: 92  KCLQVNPNDRPTAAQL 107
           +C + +P +RPT   L
Sbjct: 239 QCWRKDPEERPTFEYL 254

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  + E+ T+ R PY G+     L ++ RG   P P        D + 
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 92  KCLQVNPNDRPTAAQL 107
           +C + +P +RPT   L
Sbjct: 250 QCWRKDPEERPTFEYL 265

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  + E+ T+ R PY G+     L ++ RG   P P        D + 
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 92  KCLQVNPNDRPTAAQL 107
           +C + +P +RPT   L
Sbjct: 250 QCWRKDPEERPTFEYL 265

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  + E+ T+ R PY G+     L ++ RG   P P        D + 
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 92  KCLQVNPNDRPTAAQL 107
           +C + +P +RPT   L
Sbjct: 250 QCWRKDPEERPTFEYL 265

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  + E+ T+ R PY G+     L ++ RG   P P        D + 
Sbjct: 181 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 240
Query: 92  KCLQVNPNDRPTAAQL 107
           +C + +P +RPT   L
Sbjct: 241 QCWRKDPEERPTFEYL 256

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  + E+ T+ R PY G+     L ++ RG   P P        D + 
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 92  KCLQVNPNDRPTAAQL 107
           +C + +P +RPT   L
Sbjct: 250 QCWRKDPEERPTFEYL 265

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  + E+ T+ R PY G+     L ++ RG   P P        D + 
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 92  KCLQVNPNDRPTAAQL 107
           +C + +P +RPT   L
Sbjct: 250 QCWRKDPEERPTFEYL 265

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF--GVEWALFKIARGEL---PPIPDSVS 83
           +V   + G+    D WS+G  + E+LT   P+   G + +  +I+R  L   PP P  +S
Sbjct: 231 IVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMS 290
Query: 84  RDARDFILKCLQVNPNDR-----PTAAQLMEHPFVKR 115
             A+D I + L  +P  R       A ++ EH F ++
Sbjct: 291 ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 327

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWA-LF-KIARGELP---PIPDSVSRDARDFIL 91
           Y    D WS+G     +L    P++    A LF +I + E     P  D +S  A+DFI 
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 92  KCLQVNPNDRPTAAQLMEHPFV 113
             ++ +P  R T  Q ++HP++
Sbjct: 255 HLMEKDPEKRFTCEQALQHPWI 276

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWA-LF-KIARGELP---PIPDSVSRDARDFIL 91
           Y    D WS+G     +L    P++    A LF +I + E     P  D +S  A+DFI 
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 92  KCLQVNPNDRPTAAQLMEHPFV 113
             ++ +P  R T  Q ++HP++
Sbjct: 255 HLMEKDPEKRFTCEQALQHPWI 276

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVE--WALFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  + E++T+ R PY G+     L ++ RG   P P        + ++
Sbjct: 181 GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMI 240
Query: 92  KCLQVNPNDRPTAAQL 107
            C + +P +RPT   L
Sbjct: 241 HCWKKDPEERPTFEYL 256

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVE--WALFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  ++E++T  R PY G+     +  + RG   P P++   +  + ++
Sbjct: 344 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMM 403
Query: 92  KCLQVNPNDRPT 103
           +C +  P +RPT
Sbjct: 404 RCWKNRPEERPT 415

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVE--WALFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  ++E++T  R PY G+     +  + RG   P P++   +  + ++
Sbjct: 187 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMM 246
Query: 92  KCLQVNPNDRPT 103
           +C +  P +RPT
Sbjct: 247 RCWKNRPEERPT 258

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWA-LF-KIARGELP---PIPDSVSRDARDFIL 91
           Y    D WS+G     +L    P++    A LF +I + E     P  D +S  A+DFI 
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 92  KCLQVNPNDRPTAAQLMEHPFV 113
             ++ +P  R T  Q ++HP++
Sbjct: 255 HLMEKDPEKRFTCEQALQHPWI 276

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRD---ARDFILK 92
           GL AD+WS+G     +L+   P+ G   +  L  ++        +  S     A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 93  CLQVNPNDRPTAAQLMEHPFVK-----RPLPTSWGLP 124
            L  +P  R T    ++HP++K     + L ++W  P
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 291

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVE--WALFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  ++E++T  R PY G+     +  + RG   P P++   +  + ++
Sbjct: 360 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMM 419
Query: 92  KCLQVNPNDRPT 103
           +C +  P +RPT
Sbjct: 420 RCWKNRPEERPT 431

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRD---ARDFILK 92
           GL AD+WS+G     +L+   P+ G   +  L  ++        +  S     A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 93  CLQVNPNDRPTAAQLMEHPFVK-----RPLPTSWGLP 124
            L  +P  R T    ++HP++K     + L ++W  P
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 291

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRD---ARDFILK 92
           GL AD+WS+G     +L+   P+ G   +  L  ++        +  S     A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 93  CLQVNPNDRPTAAQLMEHPFVK-----RPLPTSWGLP 124
            L  +P  R T    ++HP++K     + L ++W  P
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 291

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRD---ARDFILK 92
           GL AD+WS+G     +L+   P+ G   +  L  ++        +  S     A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 93  CLQVNPNDRPTAAQLMEHPFVK-----RPLPTSWGLP 124
            L  +P  R T    ++HP++K     + L ++W  P
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 291

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 30/110 (27%)
Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIAR--------GE--------LP- 76
              Y  P D+WSVGC   EM  R +P F     + ++ +        GE        LP 
Sbjct: 193 QSSYATPVDLWSVGCIFAEMFRR-KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 251
Query: 77  ---------PIPDSVS---RDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
                    PI   V+      +D +LKCL  NP  R +A   + HP+ +
Sbjct: 252 QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRD---ARDFILK 92
           GL AD+WS+G     +L+   P+ G   +  L  ++        +  S     A+DFI +
Sbjct: 194 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 253
Query: 93  CLQVNPNDRPTAAQLMEHPFVK-----RPLPTSWGLP 124
            L  +P  R T    ++HP++K     + L ++W  P
Sbjct: 254 LLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 290

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRD---ARDFILK 92
           GL AD+WS+G     +L+   P+ G   +  L  ++        +  S     A+DFI +
Sbjct: 194 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 253
Query: 93  CLQVNPNDRPTAAQLMEHPFVK-----RPLPTSWGLP 124
            L  +P  R T    ++HP++K     + L ++W  P
Sbjct: 254 LLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 290

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  + E+ T+ R PY G+     L ++ RG   P P        D + 
Sbjct: 187 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 246
Query: 92  KCLQVNPNDRPTAAQL 107
           +C +  P +RPT   L
Sbjct: 247 QCWRKEPEERPTFEYL 262

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWA-LF-KIARGELP---PIPDSVSRDARDFIL 91
           Y    D WS+G     +L    P++    A LF +I + E     P  D +S  A+DFI 
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 92  KCLQVNPNDRPTAAQLMEHPFV 113
             ++ +P  R T  Q ++HP++
Sbjct: 255 HLMEKDPEKRFTCEQALQHPWI 276

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  + E+ T+ R PY G+     L ++ RG   P P        D + 
Sbjct: 356 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 415
Query: 92  KCLQVNPNDRPTAAQL 107
           +C +  P +RPT   L
Sbjct: 416 QCWRKEPEERPTFEYL 431

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  + E+ T+ R PY G+     L ++ RG   P P        D + 
Sbjct: 356 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 415
Query: 92  KCLQVNPNDRPTAAQL 107
           +C +  P +RPT   L
Sbjct: 416 QCWRKEPEERPTFEYL 431

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  + E+ T+ R PY G+     L ++ RG   P P        D + 
Sbjct: 187 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 246
Query: 92  KCLQVNPNDRPTAAQL 107
           +C +  P +RPT   L
Sbjct: 247 QCWRKEPEERPTFEYL 262

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 30/110 (27%)
Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIAR--------GE--------LP- 76
              Y  P D+WSVGC   EM  R +P F     + ++ +        GE        LP 
Sbjct: 193 QSSYATPVDLWSVGCIFAEMFRR-KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 251
Query: 77  ---------PIPDSVS---RDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
                    PI   V+      +D +LKCL  NP  R +A   + HP+ +
Sbjct: 252 QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  + E+ T+ R PY G+     L ++ RG   P P        D + 
Sbjct: 356 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 415
Query: 92  KCLQVNPNDRPTAAQL 107
           +C +  P +RPT   L
Sbjct: 416 QCWRKEPEERPTFEYL 431

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  + E+ T+ R PY G+     L ++ RG   P P        D + 
Sbjct: 180 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 239
Query: 92  KCLQVNPNDRPTAAQL 107
           +C +  P +RPT   L
Sbjct: 240 QCWRKEPEERPTFEYL 255

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 30/110 (27%)
Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIAR--------GE--------LP- 76
              Y  P D+WSVGC   EM  R +P F     + ++ +        GE        LP 
Sbjct: 193 QSSYATPVDLWSVGCIFAEMFRR-KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 251
Query: 77  ---------PIPDSVS---RDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
                    PI   V+      +D +LKCL  NP  R +A   + HP+ +
Sbjct: 252 QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  + E+ T+ R PY G+     L ++ RG   P P        D + 
Sbjct: 439 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 498
Query: 92  KCLQVNPNDRPT 103
           +C +  P +RPT
Sbjct: 499 QCWRKEPEERPT 510

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
           G + + +D+WS G  + E+ T+ R PY G+     L ++ RG   P P        D + 
Sbjct: 183 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 242
Query: 92  KCLQVNPNDRPTAAQL 107
           +C +  P +RPT   L
Sbjct: 243 QCWRKEPEERPTFEYL 258

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPD---SVSRDARDFILK 92
           G   D+W++G     +L+   P+ G +    L  + R +     D   SVS +A+DFI  
Sbjct: 228 GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKN 287
Query: 93  CLQVNPNDRPTAAQLMEHPFVK 114
            LQ  P  R T    +EHP++K
Sbjct: 288 LLQKEPRKRLTVHDALEHPWLK 309

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 58  RPYFGVEWALFKIARGELPPIPDSV-SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
           RP   +   L  I     P +P +V S + +DF+ KCL  NP +R    QLM H F+KR
Sbjct: 307 RPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 365

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 76  PPIPDSV-SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
           P +P  V S + +DF+ KCL  NP +R    QLM H F+KR
Sbjct: 263 PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 303

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 76  PPIPDSV-SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
           P +P  V S + +DF+ KCL  NP +R    QLM H F+KR
Sbjct: 263 PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 303

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 241
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 296

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 241
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 296

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 241
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 296

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 241
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 296

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 298

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGV--EWALFKIARGELPPIPDSVSRDARDF 89
           K+G +   +D+WS G  + E+ +   +PY G+  E  L  +  G     PD+      D 
Sbjct: 205 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL 264
Query: 90  ILKCLQVNPNDRPTAAQLM 108
           +  C Q NPN RPT  +++
Sbjct: 265 MRMCWQFNPNMRPTFLEIV 283

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 242
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 297

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 298

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 242
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 297

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 298

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPD---SVSRDARDFILK 92
           GL AD+WS+G     +L+   P+ G   +  L  I+        +   + S  A+DFI +
Sbjct: 210 GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRR 269
Query: 93  CLQVNPNDRPTAAQLMEHPFVK 114
            L  +P  R   AQ +EH ++K
Sbjct: 270 LLVKDPKRRMXIAQSLEHSWIK 291

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 298

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 76  PPIPDSV-SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
           P +P  V S + +DF+ KCL  NP +R    QLM H F+KR
Sbjct: 263 PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 303

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 76  PPIPDSV-SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
           P +P  V S + +DF+ KCL  NP +R    QLM H F+KR
Sbjct: 290 PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 330

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 241
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 296

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 242
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 297

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGV--EWALFKIARGELPPIPDSVSRDARDF 89
           K+G +   +D+WS G  + E+ +   +PY G+  E  L  +  G     PD+      D 
Sbjct: 206 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL 265
Query: 90  ILKCLQVNPNDRPTAAQLM 108
           +  C Q NPN RPT  +++
Sbjct: 266 MRMCWQFNPNMRPTFLEIV 284

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
           +G  A +WS+G  + +M+    P+   E    +I RG++      VS + +  I  CL +
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIRGQVF-FRQRVSSECQHLIRWCLAL 241
Query: 97  NPNDRPTAAQLMEHPFVKRPL 117
            P+DRPT  ++  HP+++  L
Sbjct: 242 RPSDRPTFEEIQNHPWMQDVL 262

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 244
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 245 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 299

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
           +G  A +WS+G  + +M+    P+   E    +I RG++      VS + +  I  CL +
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIRGQVF-FRQRVSXECQHLIRWCLAL 241
Query: 97  NPNDRPTAAQLMEHPFVKRPL 117
            P+DRPT  ++  HP+++  L
Sbjct: 242 RPSDRPTFEEIQNHPWMQDVL 262

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 247
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 248 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 302

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 242
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 297

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 76  PPIPDSV-SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
           P +P  V S + +DF+ KCL  NP +R    QLM H F+KR
Sbjct: 263 PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 303

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
           +G  A +WS+G  + +M+    P+   E    +I RG++      VS + +  I  CL +
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIRGQVF-FRQRVSSECQHLIRWCLAL 246
Query: 97  NPNDRPTAAQLMEHPFVKRPL 117
            P+DRPT  ++  HP+++  L
Sbjct: 247 RPSDRPTFEEIQNHPWMQDVL 267

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
           +G  A +WS+G  + +M+    P+   E    +I RG++      VS + +  I  CL +
Sbjct: 190 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIRGQVF-FRQRVSSECQHLIRWCLAL 244
Query: 97  NPNDRPTAAQLMEHPFVKRPL 117
            P+DRPT  ++  HP+++  L
Sbjct: 245 RPSDRPTFEEIQNHPWMQDVL 265

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 244
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 245 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 299

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPD---SVSRDARDFILK 92
           GL AD+WS+G     +L+   P+ G   +  L  I+        +   + S  A+DFI +
Sbjct: 196 GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRR 255
Query: 93  CLQVNPNDRPTAAQLMEHPFVK 114
            L  +P  R   AQ +EH ++K
Sbjct: 256 LLVKDPKRRMXIAQSLEHSWIK 277

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGV--EWALFKIARGELPPIPDSVSRDARDF 89
           K+G +   +D+WS G  + E+ +   +PY G+  E  L  +  G     PD+      D 
Sbjct: 205 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL 264
Query: 90  ILKCLQVNPNDRPTAAQLM 108
           +  C Q NPN RPT  +++
Sbjct: 265 MRMCWQFNPNMRPTFLEIV 283

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 298

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
           +G  A +WS+G  + +M+    P+   E    +I RG++      VS + +  I  CL +
Sbjct: 191 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIRGQVF-FRQRVSSECQHLIRWCLAL 245
Query: 97  NPNDRPTAAQLMEHPFVKRPL 117
            P+DRPT  ++  HP+++  L
Sbjct: 246 RPSDRPTFEEIQNHPWMQDVL 266

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
           Y    DIWS+GC   EM+TR   + G      LF+I                        
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 247
Query: 71  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 248 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 302

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	133
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-43
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-37
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	9e-34
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-33
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	7e-33
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-30
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-30
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	4e-30
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	9e-30
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-28
2a19_B	284	Interferon-induced, double-stranded RNA-activated	7e-28
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-27
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-26
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	5e-26
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	5e-26
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	9e-26
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-25
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	3e-25
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	4e-25
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	6e-25
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-24
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	9e-24
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-23
2dyl_A	318	Dual specificity mitogen-activated protein kinase	3e-23
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	4e-23
3fme_A	290	Dual specificity mitogen-activated protein kinase;	2e-22
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	5e-22
3an0_A	340	Dual specificity mitogen-activated protein kinase;	7e-22
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-21
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-20
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-19
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-19
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	4e-19
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	4e-19
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	5e-19
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	5e-19
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	8e-19
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	8e-19
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	8e-19
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-18
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-18
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	2e-18
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-18
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	4e-18
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	5e-18
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	8e-18
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-17
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-17
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	4e-17
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	6e-17
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	9e-17
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-16
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-16
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-16
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	3e-16
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	3e-16
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	3e-16
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	3e-16
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	4e-16
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	4e-16
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	5e-16
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	5e-16
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	6e-16
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	8e-16
3bhy_A	283	Death-associated protein kinase 3; death associate	1e-15
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-15
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-15
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-15
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	3e-15
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	4e-15
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	5e-15
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	7e-15
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	7e-15
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	8e-15
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-14
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-14
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-14
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	3e-14
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	3e-14
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	5e-14
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	5e-14
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	6e-14
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	8e-14
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	8e-14
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	9e-14
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	1e-13
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	2e-13
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	4e-13
3o0g_A	292	Cell division protein kinase 5; kinase activator c	6e-13
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	6e-13
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	7e-13
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	8e-13
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	8e-13
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	8e-13
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	1e-12
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	2e-12
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	4e-12
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	5e-12
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	7e-12
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	7e-12
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	8e-12
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	8e-12
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	9e-12
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-11
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-11
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	2e-11
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	2e-11
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	2e-11
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-11
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-11
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	3e-11
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	3e-11
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	3e-11
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	4e-11
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	4e-11
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	4e-11
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	4e-11
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	4e-11
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	5e-11
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	6e-11
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	8e-11
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	8e-11
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	9e-11
3niz_A	311	Rhodanese family protein; structural genomics, str	9e-11
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	9e-11
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	1e-10
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	2e-10
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-10
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	2e-10
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-10
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-10
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-10
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	4e-10
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	4e-10
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	4e-10
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	4e-10
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	5e-10
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	6e-10
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	9e-10
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	9e-10
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	1e-09
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	1e-09
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	1e-09
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	1e-09
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	2e-09
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-09
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	4e-09
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	5e-09
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	5e-09
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	5e-09
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	6e-09
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	9e-09
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	9e-09
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	2e-08
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-08
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	2e-08
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	6e-04
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	7e-08
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-07
3ork_A	311	Serine/threonine protein kinase; structural genomi	2e-07
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-07
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	6e-07
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	8e-07
3uqc_A	286	Probable conserved transmembrane protein; structur	1e-06
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	1e-06
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	1e-06
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	2e-06
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-06
3rp9_A	458	Mitogen-activated protein kinase; structural genom	2e-06
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	3e-06
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	3e-06
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	3e-06
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	5e-06
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	6e-06
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	7e-06
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	8e-06
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	9e-06
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-05
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	1e-05
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-05
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-05
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-05
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-05
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-05
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-05
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-05
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-05
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-05
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	3e-05
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	3e-05
3pls_A	298	Macrophage-stimulating protein receptor; protein k	3e-05
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	3e-05
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	3e-05
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	4e-05
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	4e-05
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	4e-05
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	6e-05
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	6e-05
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	6e-05
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	7e-05
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	7e-05
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	7e-05
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-04
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	1e-04
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-04
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	1e-04
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-04
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-04
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-04
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-04
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-04
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-04
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	3e-04
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	3e-04
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	3e-04
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	3e-04
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	3e-04
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	4e-04
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	6e-04
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	7e-04

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  143 bits (362), Expect = 2e-43
 Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 4/96 (4%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPY--FGVEW-ALFKIARGEL-PPIPDSVSR 84
           +++    GYG  ADIWS+GCT++EM T   P+   G    A+FK+   ++ P IP+S+S 
Sbjct: 194 IIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSA 253

Query: 85  DARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 120
           +A+ FILKC + +P+ R  A  L+   F+K      
Sbjct: 254 EAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKKK 289

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  129 bits (325), Expect = 1e-37
 Identities = 26/98 (26%), Positives = 35/98 (35%), Gaps = 6/98 (6%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGE--LPPIPDSVSRDARD 88
                    DIWS  C +L ML  C P+          KIA     +  IP S +     
Sbjct: 229 MGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQ 288

Query: 89  FILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTP 126
            I + L+  P  R +A +L         L    GL +P
Sbjct: 289 AIQEGLRKEPVHRASAMELRRKVGKA--LQEVGGLKSP 324

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  118 bits (297), Expect = 9e-34
 Identities = 17/86 (19%), Positives = 36/86 (41%), Gaps = 4/86 (4%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPP--IPDSVSRDARDF 89
              Y    D+++ G  +LEM T   PY   +    +++     + P         + ++ 
Sbjct: 203 EEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEI 262

Query: 90  ILKCLQVNPNDRPTAAQLMEHPFVKR 115
           I  C++ N ++R +   L+ H F + 
Sbjct: 263 IEGCIRQNKDERYSIKDLLNHAFFQE 288

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  117 bits (296), Expect = 2e-33
 Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 2/84 (2%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPP-IPDSVSRDARDFILK 92
            G YG  AD++S+G T+LE+        G E    ++ +G LPP     +S + R  ++ 
Sbjct: 229 QGSYGTAADVFSLGLTILEVACNMELPHGGE-GWQQLRQGYLPPEFTAGLSSELRSVLVM 287

Query: 93  CLQVNPNDRPTAAQLMEHPFVKRP 116
            L+ +P  R TA  L+  P +++P
Sbjct: 288 MLEPDPKLRATAEALLALPVLRQP 311

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  115 bits (291), Expect = 7e-33
 Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 3/83 (3%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWALFKIARGELPPIPDSVSRDARDFILK 92
           N  +   ADI+++  TV+           G +W   +I +G LP IP  +S++  + +  
Sbjct: 205 NYTHLPKADIFALALTVVCAAGAEPLPRNGDQW--HEIRQGRLPRIPQVLSQEFTELLKV 262

Query: 93  CLQVNPNDRPTAAQLMEHPFVKR 115
            +  +P  RP+A  L++H  +  
Sbjct: 263 MIHPDPERRPSAMALVKHSVLLS 285

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  111 bits (279), Expect = 1e-30
 Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 4/115 (3%)

Query: 23  NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELP-PI 78
           +  + +            +D+WS+GC +  M     P+  +      L  I         
Sbjct: 183 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 242

Query: 79  PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHHFIMQS 133
           PD   +D +D +  CL+ +P  R +  +L+ HP+V+        +       M+ 
Sbjct: 243 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKY 297

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  111 bits (279), Expect = 2e-30
 Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 4/115 (3%)

Query: 23  NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELP-PI 78
           +  + +            +D+WS+GC +  M     P+  +      L  I         
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 289

Query: 79  PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHHFIMQS 133
           PD   +D +D +  CL+ +P  R +  +L+ HP+V+        +       M+ 
Sbjct: 290 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKY 344

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  109 bits (274), Expect = 4e-30
 Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 4/97 (4%)

Query: 23  NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELP-PI 78
           +  + +            +D+WS+GC +  M     P+  +      L  I         
Sbjct: 202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 261

Query: 79  PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
           PD   +D +D +  CL+ +P  R +  +L+ HP+V+ 
Sbjct: 262 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 298

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  109 bits (273), Expect = 9e-30
 Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 2/85 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFI 90
           +N  Y   +DIW++GC + E+ T    +        + KI  G  PP+    S D R  +
Sbjct: 198 ENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLV 257

Query: 91  LKCLQVNPNDRPTAAQLMEHPFVKR 115
            +  + NP DRP+   ++E  F+ +
Sbjct: 258 SQLFKRNPRDRPSVNSILEKGFIAK 282

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  104 bits (262), Expect = 2e-28
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 6/102 (5%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW---ALF-KIARGELPPIPDSV-SRDAR 87
              GY   +DIWS+GC + EM     P++G +    +L  KI + + PP+P    S + R
Sbjct: 209 HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELR 268

Query: 88  DFILKCLQVNPNDRPTAAQLMEHPFVKRP-LPTSWGLPTPHH 128
             +  C+  +P  RP    + +          +S      HH
Sbjct: 269 QLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSLEHHHHHH 310

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  102 bits (257), Expect = 7e-28
 Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 3/86 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILK 92
            +  YG   D++++G  + E+L  C   F        +  G    I D   +  +  + K
Sbjct: 194 SSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDG---IISDIFDKKEKTLLQK 250

Query: 93  CLQVNPNDRPTAAQLMEHPFVKRPLP 118
            L   P DRP  ++++    V +  P
Sbjct: 251 LLSKKPEDRPNTSEILRTLTVWKKSP 276

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  101 bits (253), Expect = 2e-27
 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 2/85 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-ALF-KIARGELPPIPDSVSRDARDFI 90
               Y   +DIWS+GC + E+     P+       L  KI  G+   IP   S +  + I
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEII 248

Query: 91  LKCLQVNPNDRPTAAQLMEHPFVKR 115
            + L +    RP+  +++E+P +  
Sbjct: 249 TRMLNLKDYHRPSVEEILENPLILE 273

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 99.7 bits (249), Expect = 1e-26
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFI 90
           K   Y   ADIWS+G T +E+     P+  +     LF I +   P +  + S+  ++F+
Sbjct: 192 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFV 251

Query: 91  LKCLQVNPNDRPTAAQLMEHPFVKR 115
             CL   P+ RPTA +L++H F+ R
Sbjct: 252 EACLNKEPSFRPTAKELLKHKFILR 276

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 99.0 bits (247), Expect = 5e-26
 Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 3/95 (3%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI-PDSVSRD 85
           ++    G Y    D+WS+G T +E+  R  P F +    AL+ IA+ E P +     S  
Sbjct: 222 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEY 281

Query: 86  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 120
            R+F+  CLQ  P DRPT+  L++H FV R  P +
Sbjct: 282 FRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPT 316

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 99.8 bits (249), Expect = 5e-26
 Identities = 20/90 (22%), Positives = 33/90 (36%), Gaps = 5/90 (5%)

Query: 32  SKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW---ALFKIARGEL--PPIPDSVSRDA 86
                     DI+S GC    +++     FG      A   +    L            A
Sbjct: 201 DCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIA 260

Query: 87  RDFILKCLQVNPNDRPTAAQLMEHPFVKRP 116
           R+ I K + ++P  RP+A  +++HPF    
Sbjct: 261 RELIEKMIAMDPQKRPSAKHVLKHPFFWSL 290

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 97.4 bits (243), Expect = 9e-26
 Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 4/92 (4%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDARD 88
           K+  Y   ADIWS+G T++EM     P+  +     L KIA+ + P +  P   S + RD
Sbjct: 195 KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRD 254

Query: 89  FILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 120
           F+   L  NP  RP+AAQL+EHPFV       
Sbjct: 255 FLKIALDKNPETRPSAAQLLEHPFVSSITSNK 286

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 97.4 bits (243), Expect = 1e-25
 Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 4/92 (4%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDARD 88
           +  GY   ADIWS+G T +EM     PY  +    A+F I     P    P+  S +  D
Sbjct: 198 QEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTD 257

Query: 89  FILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 120
           F+ +CL  +P  R TA QL++HPFV+     S
Sbjct: 258 FVKQCLVKSPEQRATATQLLQHPFVRSAKGVS 289

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 96.7 bits (241), Expect = 3e-25
 Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 3/96 (3%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI-PDSVSR 84
               + +  Y   +D+WS+G T +EM     P   +    ALF I R   P +     S+
Sbjct: 202 ACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSK 261

Query: 85  DARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 120
             + FI  CL  N + RP   QLM+HPF++      
Sbjct: 262 KFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNER 297

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 95.8 bits (239), Expect = 4e-25
 Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 4/92 (4%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDARD 88
               YG   DIWS+G   +EM+    PY       AL+ IA    P +  P+ +S   RD
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRD 248

Query: 89  FILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 120
           F+ +CL+++   R +A +L++H F+K   P S
Sbjct: 249 FLNRCLEMDVEKRGSAKELLQHQFLKIAKPLS 280

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 95.1 bits (237), Expect = 6e-25
 Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 1/89 (1%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILK 92
               Y    DI+S+G  + E+L            L  +   + PP+           +  
Sbjct: 203 HGNSYSHKVDIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQD 262

Query: 93  CLQVNPNDRPTAAQLMEHPFVKR-PLPTS 120
            L  +P +RP A  ++E+   +    P  
Sbjct: 263 MLSPSPMERPEAINIIENAVFEDLDFPGK 291

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 94.4 bits (235), Expect = 2e-24
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 4/92 (4%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDARD 88
               Y    DIWS+G  V+EM+    PYF      A+ ++     P +     VS   RD
Sbjct: 214 SRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRD 273

Query: 89  FILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 120
           F+ + L  +P +R TA +L++HPF+ +     
Sbjct: 274 FLERMLVRDPQERATAQELLDHPFLLQTGLPE 305

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 92.0 bits (229), Expect = 9e-24
 Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 11/103 (10%)

Query: 30  VNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV----- 82
           V  +  GY   ADIWS G T +E+ T   PY        L    + + P +   V     
Sbjct: 197 VMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEM 256

Query: 83  ----SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSW 121
                +  R  I  CLQ +P  RPTAA+L+ H F ++     +
Sbjct: 257 LKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEF 299

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 92.0 bits (229), Expect = 2e-23
 Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 7/92 (7%)

Query: 31  NSKNGGYGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIARGELPPIPDSV----S 83
           ++   GY + +D+WS+G T+ E+ T   PY     V   L ++ +G+ P + +S     S
Sbjct: 200 SASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFS 259

Query: 84  RDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
               +F+  CL  + + RP   +L++HPF+  
Sbjct: 260 PSFINFVNLCLTKDESKRPKYKELLKHPFILM 291

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 90.9 bits (226), Expect = 3e-23
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 5/93 (5%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELPPIPDSV-- 82
              +     Y + AD+WS+G +++E+ T   PY   +     L K+ + E P +P  +  
Sbjct: 197 DPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGF 256

Query: 83  SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
           S D + F+  CL  +   RP   +L+EH F+KR
Sbjct: 257 SGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR 289

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 90.5 bits (225), Expect = 4e-23
 Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 8/97 (8%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA--LFKIARGEL---PPIPDSVS 83
           V++   G Y    D++S+G    EM+       G+E    L K+    +   P   D+  
Sbjct: 201 VLDGT-GHYNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKKLRSVSIEFPPDFDDNKM 257

Query: 84  RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 120
           +  +  I   +  +PN RP A  L+   ++       
Sbjct: 258 KVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDE 294

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 88.5 bits (220), Expect = 2e-22
 Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 8/91 (8%)

Query: 31  NSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-----ALFKIARGELPPIPDSV-SR 84
                GY + +DIWS+G T++E+     PY    W      L ++     P +P    S 
Sbjct: 184 ELNQKGYSVKSDIWSLGITMIELAILRFPYD--SWGTPFQQLKQVVEEPSPQLPADKFSA 241

Query: 85  DARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
           +  DF  +CL+ N  +RPT  +LM+HPF   
Sbjct: 242 EFVDFTSQCLKKNSKERPTYPELMQHPFFTL 272

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 88.7 bits (220), Expect = 5e-22
 Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 7/99 (7%)

Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-ALFKIARGEL------PP 77
           L +              DI+S+GC    +L++ +  FG ++     I RG          
Sbjct: 204 LEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCL 263

Query: 78  IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP 116
              S+  +A D I + +  +P  RPTA +++ HP     
Sbjct: 264 HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPK 302

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 86.9 bits (215), Expect = 1e-21
 Identities = 14/82 (17%), Positives = 29/82 (35%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILK 92
               Y    DI+S+G  + E+L            +  +   + P +           +  
Sbjct: 249 HGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQD 308

Query: 93  CLQVNPNDRPTAAQLMEHPFVK 114
            L  +P +RP A  ++E+   +
Sbjct: 309 MLSPSPTERPEATDIIENAIFE 330

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 83.8 bits (207), Expect = 2e-20
 Identities = 29/134 (21%), Positives = 46/134 (34%), Gaps = 47/134 (35%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV---- 82
           V+     GY   +DI+SVG T  E+     P+  +     L +   G +P + D+     
Sbjct: 206 VLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPA 265

Query: 83  -----------------------------------------SRDARDFILKCLQVNPNDR 101
                                                    S     F+ +CLQ NP+ R
Sbjct: 266 EELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDAR 325

Query: 102 PTAAQLMEHPFVKR 115
           P+A+ L+ H F K+
Sbjct: 326 PSASTLLNHSFFKQ 339

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 81.4 bits (201), Expect = 2e-19
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 5/92 (5%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARGEL---PPIPDSVS 83
           V+N+ N  YG   D WS G  +  +L    P+ GV +     ++   +L    P  + +S
Sbjct: 245 VLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLS 304

Query: 84  RDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
             ARD +   L  N ++R  A + ++HP++ +
Sbjct: 305 PLARDLLSNLLNRNVDERFDAMRALQHPWISQ 336

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 81.7 bits (202), Expect = 2e-19
 Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 5/86 (5%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARGEL---PPIPDSVSRDARD 88
              Y    D+WS+G  +  +L    P+ G  +  +  K+ +G+     P   +VS  A+D
Sbjct: 211 RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKD 270

Query: 89  FILKCLQVNPNDRPTAAQLMEHPFVK 114
            I + LQ +   R +A Q +EHP++K
Sbjct: 271 LIKQMLQFDSQRRISAQQALEHPWIK 296

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 79.6 bits (197), Expect = 4e-19
 Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 4/85 (4%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFG-VEWALF-KIARGEL--PPIPDSVSRDARDF 89
                   DIWS G  +  +LT C P+ G     +  K    E         ++  A D 
Sbjct: 199 KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDL 258

Query: 90  ILKCLQVNPNDRPTAAQLMEHPFVK 114
           + + L  +P  RP+AAQ++ H + K
Sbjct: 259 LKQMLTKDPERRPSAAQVLHHEWFK 283

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 79.1 bits (196), Expect = 4e-19
 Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 7/95 (7%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIARGELPPIPDSVSRD 85
           +       +GL +D+WS+GC    +L    P F    V+  L K+   +   +P  +S +
Sbjct: 183 IATRS--AHGLESDVWSLGCMFYTLLIGRPP-FDTDTVKNTLNKVVLADYE-MPSFLSIE 238

Query: 86  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 120
           A+D I + L+ NP DR + + +++HPF+ R   T 
Sbjct: 239 AKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTK 273

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 80.5 bits (199), Expect = 5e-19
 Identities = 19/87 (21%), Positives = 39/87 (44%), Gaps = 5/87 (5%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARGEL---PPIPDSVSRDARD 88
              Y    D+WS G  +  +L    P+ G  +  +  K+ +G+         ++S +A++
Sbjct: 221 KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKE 280

Query: 89  FILKCLQVNPNDRPTAAQLMEHPFVKR 115
            I   L  + N R TA + +   ++K+
Sbjct: 281 LIKLMLTYDYNKRCTAEEALNSRWIKK 307

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 79.2 bits (196), Expect = 5e-19
 Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 10/112 (8%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRDA 86
           V++ K  G+    D+WS+GC +  +L    P+    ++    +I + E   IP  ++  A
Sbjct: 186 VLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-IPKHINPVA 242

Query: 87  RDFILKCLQVNPNDRPTAAQLMEHPFVK-----RPLPTSWGLPTPHHFIMQS 133
              I K LQ +P  RPT  +L+   F         LP +     P   I  S
Sbjct: 243 ASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAPS 294

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 80.1 bits (198), Expect = 8e-19
 Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 5/99 (5%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARGEL---PPIPDSVSRDARD 88
           +G Y    D+WS G  +  +L+ C P+ G  E+ +  K+ +G+     P    VS  A+D
Sbjct: 201 HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKD 260

Query: 89  FILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPH 127
            I K L   P+ R +A   ++H +++        +  P 
Sbjct: 261 LIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPS 299

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 79.7 bits (197), Expect = 8e-19
 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 6/90 (6%)

Query: 31  NSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALF-KIARGEL---PPIPDSVSR 84
           +    GY    D WS+G  +   L+   P+     + +L  +I  G+    P +   VS 
Sbjct: 315 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 374

Query: 85  DARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
            A D + K L V+P  R T  + + HP+++
Sbjct: 375 KALDLVKKLLVVDPKARFTTEEALRHPWLQ 404

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 79.7 bits (196), Expect = 8e-19
 Identities = 13/98 (13%), Positives = 29/98 (29%), Gaps = 10/98 (10%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA---------LFKIARGELP-P 77
           + +N+    +    + W +G ++  +     P+  V            L       L   
Sbjct: 261 EFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFG 320

Query: 78  IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
               +    +  I + L  +   R    + ME P   +
Sbjct: 321 SCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQ 358

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 78.6 bits (194), Expect = 1e-18
 Identities = 19/96 (19%), Positives = 35/96 (36%), Gaps = 5/96 (5%)

Query: 31  NSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW---ALFKIARGEL-PPIPDSVSRDA 86
              +       D+WS+GC +  M+    PY  V     ++    + +L  P     S   
Sbjct: 217 VQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSAL 276

Query: 87  RDFILKCLQVNPNDRPTAAQLMEHP-FVKRPLPTSW 121
              +   + V+P+ RP    L+     ++ P P   
Sbjct: 277 WQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQH 312

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 79.0 bits (195), Expect = 2e-18
 Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 5/86 (5%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFG-VEWALF-KIARGEL---PPIPDSVSRDARD 88
            G Y    D+WS G  +  +L+   P++G  E+ +  ++  G+     P   ++S DA+D
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKD 255

Query: 89  FILKCLQVNPNDRPTAAQLMEHPFVK 114
            I K L  +P+ R TA Q +EHP+++
Sbjct: 256 LIRKMLTFHPSLRITATQCLEHPWIQ 281

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 78.5 bits (193), Expect = 2e-18
 Identities = 14/85 (16%), Positives = 26/85 (30%), Gaps = 7/85 (8%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRDARDFI 90
           +        D W++G  +  +     P            I R        ++ +  R  +
Sbjct: 286 RRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRS-----CKNIPQPVRALL 340

Query: 91  LKCLQVNPNDRPTAAQLMEHPFVKR 115
              L+    DR    Q ME P  ++
Sbjct: 341 EGFLRYPKEDRLLPLQAMETPEYEQ 365

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 77.3 bits (191), Expect = 2e-18
 Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 5/89 (5%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRDA 86
           ++  +   +    D+WS+G    E L    P+     +    +I+R E    PD V+  A
Sbjct: 178 MIEGR--MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGA 234

Query: 87  RDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
           RD I + L+ NP+ RP   +++EHP++  
Sbjct: 235 RDLISRLLKHNPSQRPMLREVLEHPWITA 263

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 77.3 bits (191), Expect = 4e-18
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 4/83 (4%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF-KIARGEL---PPIPDSVSRDARDFIL 91
            YG P D+W  G  +  +L+ C P++G +  LF  I +G+    P     +S  A+D + 
Sbjct: 209 PYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVR 268

Query: 92  KCLQVNPNDRPTAAQLMEHPFVK 114
           + L ++P +R T  + + HP++K
Sbjct: 269 RMLMLDPAERITVYEALNHPWLK 291

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 77.0 bits (190), Expect = 5e-18
 Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 8/101 (7%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRDA 86
           V++ K  G+    D+WS+GC +  +L    P+    ++    +I + E   IP  ++  A
Sbjct: 212 VLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-IPKHINPVA 268

Query: 87  RDFILKCLQVNPNDRPTAAQLMEHPFVKR-PLPTSWGLPTP 126
              I K LQ +P  RPT  +L+   F     +P    LP  
Sbjct: 269 ASLIQKMLQTDPTARPTINELLNDEFFTSGYIPAR--LPIT 307

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 76.7 bits (189), Expect = 8e-18
 Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 4/95 (4%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELP-PIPDSVSRDARDFIL 91
            N   G   DIW++GC +  +  R  P+     A  +I  G+   P  D+        I 
Sbjct: 226 SNFPIGEKQDIWALGCILYLLCFRQHPFEDG--AKLRIVNGKYSIPPHDTQYTVFHSLIR 283

Query: 92  KCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTP 126
             LQVNP +R + A+++           +    +P
Sbjct: 284 AMLQVNPEERLSIAEVVHQLQEIAAAR-NVNPKSP 317

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 75.8 bits (187), Expect = 2e-17
 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 6/90 (6%)

Query: 31  NSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALF-KIARGEL---PPIPDSVSR 84
           +    GY    D WS+G  +   L+   P+     + +L  +I  G+    P +   VS 
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 249

Query: 85  DARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
            A D + K L V+P  R T  + + HP+++
Sbjct: 250 KALDLVKKLLVVDPKARFTTEEALRHPWLQ 279

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 75.3 bits (186), Expect = 2e-17
 Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 5/87 (5%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG-VEWALF-KIARGEL---PPIPDSVSRDAR 87
               Y    D WS+G     +L    P++   E  LF KI  G      P  D +S  A+
Sbjct: 180 AQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAK 239

Query: 88  DFILKCLQVNPNDRPTAAQLMEHPFVK 114
           DFI   L+ +PN+R T  + + HP++ 
Sbjct: 240 DFICHLLEKDPNERYTCEKALSHPWID 266

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 74.2 bits (183), Expect = 4e-17
 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 5/92 (5%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFG-VEWALF-KIARGEL---PPIPDSVSRDARD 88
            G YG   D WS G  +  +L    P+    +  +  KI  G          +VS  A  
Sbjct: 181 EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAES 240

Query: 89  FILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 120
            I + L  +P  R T+ Q +EH + ++ L +S
Sbjct: 241 LIRRLLTKSPKQRITSLQALEHEWFEKQLSSS 272

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 73.4 bits (181), Expect = 6e-17
 Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 5/92 (5%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-ALF-KIARGELPPIPDSVSRDA 86
           ++  K   +    D+W  G    E L    P+          +I   +L   P  +S  +
Sbjct: 183 MIEGK--THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLK-FPPFLSDGS 239

Query: 87  RDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 118
           +D I K L+ +P  R     +MEHP+VK    
Sbjct: 240 KDLISKLLRYHPPQRLPLKGVMEHPWVKANSR 271

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 73.0 bits (180), Expect = 9e-17
 Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 5/86 (5%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFG-VEWALF-KIARGEL--PPIP-DSVSRDARD 88
            G Y    D+WS G  +  +L+   P++G  E+ +  ++  G+         ++S DA+D
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKD 255

Query: 89  FILKCLQVNPNDRPTAAQLMEHPFVK 114
            I K L  +P+ R TA Q +EHP+++
Sbjct: 256 LIRKMLTFHPSLRITATQCLEHPWIQ 281

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 73.5 bits (181), Expect = 1e-16
 Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 6/88 (6%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALF-KIARGEL---PPIPDSVSRDA 86
           +   YG   D+WSVG     +L    P++    +  +F +I   E     P  D VS +A
Sbjct: 223 RGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNA 282

Query: 87  RDFILKCLQVNPNDRPTAAQLMEHPFVK 114
           +D + K + ++P  R T  Q ++HP+V 
Sbjct: 283 KDLVRKLIVLDPKKRLTTFQALQHPWVT 310

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 72.3 bits (178), Expect = 2e-16
 Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 5/91 (5%)

Query: 30  VNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG-VEWALF-KIARGEL---PPIPDSVSR 84
           +N  + GYG   D+WS G  +  +L    P++   +  +   I  G      P  D  S 
Sbjct: 199 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSD 258

Query: 85  DARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
             +D + + L V P  R TA + + HPF ++
Sbjct: 259 TVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 72.3 bits (178), Expect = 2e-16
 Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 21/112 (18%)

Query: 36  GYGLPADIWSVG----------------CTVLEMLTRCRPYFGVEWALF-KIARGELP-P 77
            Y    D+WS+G                C       R       +  LF  I  G+   P
Sbjct: 202 IYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFP 261

Query: 78  IP--DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPH 127
                 +S  A+D I K L  +   R +AAQ+++HP+V+   P +  LPTP 
Sbjct: 262 DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPEN-TLPTPM 312

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 72.7 bits (179), Expect = 3e-16
 Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 5/84 (5%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFG-VEWALF-KIARGELP-PIP--DSVSRDARDFI 90
            YG P D+W+ G  +  +L    P++   +  L+ +I  G    P P  D+V+ +A+D I
Sbjct: 189 PYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLI 248

Query: 91  LKCLQVNPNDRPTAAQLMEHPFVK 114
            K L +NP+ R TAA+ ++HP++ 
Sbjct: 249 NKMLTINPSKRITAAEALKHPWIS 272

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 72.3 bits (178), Expect = 3e-16
 Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 19/107 (17%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG--------VEWALF-KIARGEL---PPIPD 80
              GY    D+WS+G  +  ML+   P+              +  KI +G+         
Sbjct: 182 NQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWK 241

Query: 81  SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK-------RPLPTS 120
           +VS++A+D I   L V+PN R   + L  + +++        PL T 
Sbjct: 242 NVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTP 288

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 72.0 bits (177), Expect = 3e-16
 Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 11/101 (10%)

Query: 35  GGY-GLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKC 93
             Y  LPA +WS+G  + +M+    P+   +    +I   EL   P  VS D    I +C
Sbjct: 213 HQYHALPATVWSLGILLYDMVCGDIPFERDQ----EILEAELH-FPAHVSPDCCALIRRC 267

Query: 94  LQVNPNDRPTAAQLMEHPFVKR-----PLPTSWGLPTPHHF 129
           L   P+ RP+  +++  P+++      PL  S G P P  +
Sbjct: 268 LAPKPSSRPSLEEILLDPWMQTPAEDVPLNPSKGGPAPLAW 308

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 71.8 bits (177), Expect = 3e-16
 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 5/84 (5%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFG-VEWALF-KIARG--ELPPIP-DSVSRDARDFI 90
            Y  P DIW+ G  +  +L    P++   +  L+ +I  G  + P    D+V+ +A+  I
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI 242

Query: 91  LKCLQVNPNDRPTAAQLMEHPFVK 114
              L VNP  R TA Q ++ P++ 
Sbjct: 243 DSMLTVNPKKRITADQALKVPWIC 266

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 71.9 bits (177), Expect = 4e-16
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 8/88 (9%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGV----EWALF-KIARGELP-PIP--DSVSRDAR 87
           GY    DIWS+G  +  MLT   P+          +  +I  G+        +SVS  A+
Sbjct: 196 GYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAK 255

Query: 88  DFILKCLQVNPNDRPTAAQLMEHPFVKR 115
           D + K L V+P+ R TAA ++ HP++  
Sbjct: 256 DLVSKMLHVDPHQRLTAALVLRHPWIVH 283

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 72.1 bits (177), Expect = 4e-16
 Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 5/85 (5%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFG-VEWALF-KIARGEL---PPIPDSVSRDARDFI 90
           GYG   D+W+ G  +  +L    P++   +  +   I  G+     P  D  S   +D I
Sbjct: 281 GYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLI 340

Query: 91  LKCLQVNPNDRPTAAQLMEHPFVKR 115
            + LQV+P  R TA Q ++HPF +R
Sbjct: 341 SRLLQVDPEARLTAEQALQHPFFER 365

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 72.0 bits (177), Expect = 5e-16
 Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 5/84 (5%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFG-VEWALF-KIARGEL---PPIPDSVSRDARDFI 90
            Y  P DIW+ G  +  +L    P++   +  L+ +I  G      P  D+V+ +A+  I
Sbjct: 206 PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI 265

Query: 91  LKCLQVNPNDRPTAAQLMEHPFVK 114
              L VNP  R TA Q ++ P++ 
Sbjct: 266 DSMLTVNPKKRITADQALKVPWIC 289

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 71.2 bits (175), Expect = 5e-16
 Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 9/90 (10%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFG-----VEWALF-KIARGELP-PIP--DSVSR 84
              Y    D+WS+G  +  +L    P++      +   +  +I  G+   P P    VS 
Sbjct: 172 GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE 231

Query: 85  DARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
           + +  I   L+  P  R T  + M HP++ 
Sbjct: 232 EVKMLIRNLLKTEPTQRMTITEFMNHPWIM 261

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 71.2 bits (175), Expect = 6e-16
 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 5/81 (6%)

Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQVN 97
           G  A +WS+G  + +M+    P+   E    +I RG++      VS + +  I  CL + 
Sbjct: 227 GRSAAVWSLGILLYDMVCGDIPFEHDE----EIIRGQVF-FRQRVSSECQHLIRWCLALR 281

Query: 98  PNDRPTAAQLMEHPFVKRPLP 118
           P+DRPT  ++  HP+++  L 
Sbjct: 282 PSDRPTFEEIQNHPWMQDVLL 302

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 71.3 bits (175), Expect = 8e-16
 Identities = 21/108 (19%), Positives = 41/108 (37%), Gaps = 23/108 (21%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW---ALF-KIARGEL--------- 75
             ++++   G   DIWS+G  +  M     P F ++     LF  I    +         
Sbjct: 221 FFSNESSYNGAKVDIWSLGICLYVMFYNVVP-FSLKISLVELFNNIRTKNIEYPLDRNHF 279

Query: 76  ---------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
                        + +S +  DF+   L+ NP +R T+   ++H ++ 
Sbjct: 280 LYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLA 327

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 69.9 bits (172), Expect = 1e-15
 Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 7/91 (7%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG-VEWALF-KIARGEL---PPIPDSVS 83
           +VN +    GL AD+WS+G     +L+   P+ G  +      I+            + S
Sbjct: 182 IVNYE--PLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTS 239

Query: 84  RDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
             A+DFI + L  +P  R T AQ +EH ++K
Sbjct: 240 ELAKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 70.5 bits (172), Expect = 2e-15
 Identities = 14/83 (16%), Positives = 25/83 (30%), Gaps = 7/83 (8%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRDARDFILK 92
                  D W++G  +  +     P            I R        ++ +  R  +  
Sbjct: 292 TLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRS-----CKNIPQPVRALLEG 346

Query: 93  CLQVNPNDRPTAAQLMEHPFVKR 115
            L+    DR    Q ME P  ++
Sbjct: 347 FLRYPKEDRLLPLQAMETPEYEQ 369

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 70.0 bits (172), Expect = 2e-15
 Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 11/94 (11%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLE--MLTRCRPYFG-VEWALF-KIARGEL---PPIPDS 81
           ++N          D+W++G  ++   +LT   P+ G      +  I++  +        S
Sbjct: 204 ILNYD--PITTATDMWNIG--IIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSS 259

Query: 82  VSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
           VS+ A DFI   L  NP  RPTA   + H ++++
Sbjct: 260 VSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 69.6 bits (171), Expect = 2e-15
 Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 7/93 (7%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG-VEWALF-KIARGEL---PPIPDSVS 83
           V            D+WS+G  V  +L+   P+       +   I   E          +S
Sbjct: 174 VHQHD--VVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEIS 231

Query: 84  RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP 116
            +A DF+ + L      R TA++ ++HP++K+ 
Sbjct: 232 IEAMDFVDRLLVKERKSRMTASEALQHPWLKQK 264

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 69.9 bits (171), Expect = 3e-15
 Identities = 30/128 (23%), Positives = 44/128 (34%), Gaps = 45/128 (35%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA-------------------------- 66
           +   Y + +DIWS+G +++EM     P    +                            
Sbjct: 203 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 262

Query: 67  ------------------LFKIARGELPPIPDSV-SRDARDFILKCLQVNPNDRPTAAQL 107
                             L  I     P +P  V S + +DF+ KCL  NP +R    QL
Sbjct: 263 PLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 322

Query: 108 MEHPFVKR 115
           M H F+KR
Sbjct: 323 MVHAFIKR 330

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 68.8 bits (169), Expect = 4e-15
 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 7/91 (7%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG-VEWALF-KIARGEL---PPIPDSVS 83
           +VN +    GL AD+WS+G     +L+   P+ G  +      ++            + S
Sbjct: 188 IVNYE--PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245

Query: 84  RDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
             A+DFI + L  +P  R T    ++HP++K
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 68.9 bits (169), Expect = 5e-15
 Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 16/101 (15%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFG-----VEWALF-KIARGELP-PIP--DSVSRDA 86
            Y    D+WS+G  +  +L    P++      +   +  +I  G+   P P    VS DA
Sbjct: 205 KYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDA 264

Query: 87  RDFILKCLQVNPNDRPTAAQLMEHPFVK-------RPLPTS 120
           +  I   L+ +P +R T  Q M HP++         PL T+
Sbjct: 265 KQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTA 305

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 68.4 bits (168), Expect = 7e-15
 Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG-VEWALF-KIARGEL---PPIPDSVS 83
           +VN +    GL AD+WS+G     +L+   P+ G  +      I               S
Sbjct: 189 IVNYE--PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTS 246

Query: 84  RDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
             A+DFI K L      R T  + + HP++ 
Sbjct: 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 68.5 bits (168), Expect = 7e-15
 Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG-VEWALF-KIARGEL---PPIPDSVS 83
           +VN +    GL AD+WS+G     +L+   P+ G  +      I               S
Sbjct: 189 IVNYE--PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS 246

Query: 84  RDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
             A+DFI K L      R T  + + HP++ 
Sbjct: 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 68.6 bits (168), Expect = 8e-15
 Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 7/92 (7%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARGEL---PPIPDSV 82
           ++V+ +    G   D+W++G     +L+   P+ G  +      + R +         SV
Sbjct: 220 EIVDRE--PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSV 277

Query: 83  SRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
           S +A+DFI   LQ  P  R T    +EHP++K
Sbjct: 278 SPEAKDFIKNLLQKEPRKRLTVHDALEHPWLK 309

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 68.2 bits (167), Expect = 1e-14
 Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 16/104 (15%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG-----VEWALF-KIARGELP-PIP--DSVS 83
               Y    D+WS+G  +  +L    P++      +   +  +I  G+   P P    VS
Sbjct: 236 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 295

Query: 84  RDARDFILKCLQVNPNDRPTAAQLMEHPFVK-------RPLPTS 120
            + +  I   L+  P  R T  + M HP++         PL TS
Sbjct: 296 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 339

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 66.9 bits (164), Expect = 2e-14
 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 4/101 (3%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALF-KIARGELPPIPDSVSRDA 86
           + N  +   G   DIWS G T+  + T   P+ G   + LF  I +G    IP       
Sbjct: 182 IANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYA-IPGDCGPPL 240

Query: 87  RDFILKCLQVNPNDRPTAAQLMEHP-FVKRPLPTSWGLPTP 126
            D +   L+  P  R +  Q+ +H  F K+  P    +P P
Sbjct: 241 SDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPIP 281

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 67.2 bits (164), Expect = 2e-14
 Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 7/91 (7%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARGEL---PPIPDSVS 83
           V   K    G   D+WSVG     +L+   P+ G  +      +   +          +S
Sbjct: 327 VAEGKP--VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGIS 384

Query: 84  RDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
            D +DFI K L  +PN R T  Q +EHP++ 
Sbjct: 385 EDGKDFIRKLLLADPNTRMTIHQALEHPWLT 415

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 66.7 bits (163), Expect = 3e-14
 Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 5/81 (6%)

Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQVN 97
           G   ++WS+G T+  ++    P+  +E    +     +   P  VS++    +   LQ  
Sbjct: 208 GPELEMWSLGVTLYTLVFEENPFCELE----ETVEAAIH-PPYLVSKELMSLVSGLLQPV 262

Query: 98  PNDRPTAAQLMEHPFVKRPLP 118
           P  R T  +L+  P+V +P+ 
Sbjct: 263 PERRTTLEKLVTDPWVTQPVN 283

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 66.6 bits (163), Expect = 3e-14
 Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 6/90 (6%)

Query: 29  VVNSKNG-GYGLPADIWSVGCTVLEMLTRCRPYFGV----EWALFKIARGELPPIPDSVS 83
           + +S+ G GY    D WS+G T  E+L   RPY          +       +   P + S
Sbjct: 185 MFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWS 244

Query: 84  RDARDFILKCLQVNPNDR-PTAAQLMEHPF 112
           ++    + K L+ NP+ R    + +   P+
Sbjct: 245 QEMVSLLKKLLEPNPDQRFSQLSDVQNFPY 274

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 65.3 bits (160), Expect = 5e-14
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 4/86 (4%)

Query: 36  GY-GLPADIWSVGCTVLEMLTRCRPYFGVEW-ALF-KIARGELPPIPDSVSRDARDFILK 92
            Y G   DIWS G  +  +L    P+       LF KI  G    IP+ ++R     ++ 
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFY-IPEYLNRSVATLLMH 244

Query: 93  CLQVNPNDRPTAAQLMEHPFVKRPLP 118
            LQV+P  R T   + EH + K+ LP
Sbjct: 245 MLQVDPLKRATIKDIREHEWFKQDLP 270

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 65.9 bits (161), Expect = 6e-14
 Identities = 28/134 (20%), Positives = 47/134 (35%), Gaps = 49/134 (36%)

Query: 36  GYGLPADIWSVGCTVLEMLT---------------------------------------R 56
            +G  ADIWS  C + E++T                                        
Sbjct: 211 PWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKY 270

Query: 57  CRPYFGVEWALFKIARGELPPIPDSVSR-------DAR---DFILKCLQVNPNDRPTAAQ 106
            R +F     L  I++ +  P+ D ++        +A+   DF+   LQ++P  R  A  
Sbjct: 271 TRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG 330

Query: 107 LMEHPFVKRPLPTS 120
           L+ HP++K  L   
Sbjct: 331 LVNHPWLKDTLGME 344

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 65.4 bits (160), Expect = 8e-14
 Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 4/91 (4%)

Query: 29  VVNSKNGGY-GLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARGELP-PIPDSVSR 84
            ++     + G   D+W++G T+   +    P+       L  KI    L  P    ++ 
Sbjct: 208 SLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAE 267

Query: 85  DARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
           D +D I + L  NP  R    ++  HP+V R
Sbjct: 268 DLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 65.5 bits (160), Expect = 8e-14
 Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 11/94 (11%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLE--MLTRCRPYFG-VEWALF-KIARGEL---PPIPD 80
           +VVN        P D+WSVG  V+   +L+   P+ G  +      I             
Sbjct: 258 EVVNYD--FVSFPTDMWSVG--VIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQ 313

Query: 81  SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
            +S +A++FI K L    + R +A++ ++HP++ 
Sbjct: 314 DISEEAKEFISKLLIKEKSWRISASEALKHPWLS 347

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 65.3 bits (160), Expect = 9e-14
 Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 11/92 (11%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARGELPPIPDSVSRDA 86
           ++  K       +D+W++GC + +++    P+    E+ +F KI + E    P+     A
Sbjct: 203 LLTEK--SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKA 259

Query: 87  RDFILKCLQVNPNDRPT------AAQLMEHPF 112
           RD + K L ++   R           L  HPF
Sbjct: 260 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 291

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 64.6 bits (158), Expect = 1e-13
 Identities = 28/117 (23%), Positives = 39/117 (33%), Gaps = 35/117 (29%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIAR--------------------- 72
           YG   D+W++GC V EM     P F        L+ I                       
Sbjct: 202 YGKAVDVWAIGCLVTEMFMG-EPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAG 260

Query: 73  GELPPIPD---------SVSRDARDFILKCLQVNPNDRPTAAQLMEHP-FVKRPLPT 119
             LP I +          +S    D   KCL ++P+ RP  A+L+ H  F       
Sbjct: 261 VRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAE 317

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 64.2 bits (157), Expect = 2e-13
 Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 4/86 (4%)

Query: 36  GY-GLPADIWSVGCTVLEMLTRCRPYFGVEW-ALF-KIARGELPPIPDSVSRDARDFILK 92
            Y G   D+WS G  +  ML    P+       LF K+       +PD +S  A+  I +
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYV-MPDFLSPGAQSLIRR 241

Query: 93  CLQVNPNDRPTAAQLMEHPFVKRPLP 118
            +  +P  R T  ++   P+    LP
Sbjct: 242 MIVADPMQRITIQEIRRDPWFNVNLP 267

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 63.5 bits (155), Expect = 4e-13
 Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 3/83 (3%)

Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVE-WALF-KIARGELPPIPDSVSRDARDFILKCLQ 95
           G   D+WS+G  +  +++   P+ G     L  ++ RG+   IP  +S D  + + + L 
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-IPFYMSTDCENLLKRFLV 250

Query: 96  VNPNDRPTAAQLMEHPFVKRPLP 118
           +NP  R T  Q+M+  ++     
Sbjct: 251 LNPIKRGTLEQIMKDRWINAGHE 273

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 62.5 bits (153), Expect = 6e-13
 Identities = 29/114 (25%), Positives = 42/114 (36%), Gaps = 32/114 (28%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIAR-------------GELP---- 76
           Y    D+WS GC   E+    RP F    V+  L +I R              +LP    
Sbjct: 179 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238

Query: 77  ----PIPDSV-------SRDARDFILKCLQVNPNDRPTAAQLMEHP-FVKRPLP 118
               P   S+       +   RD +   L+ NP  R +A + ++HP F     P
Sbjct: 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 63.3 bits (154), Expect = 6e-13
 Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 4/86 (4%)

Query: 36  GY-GLPADIWSVGCTVLEMLTRCRPYFGVEW-ALF-KIARGELPPIPDSVSRDARDFILK 92
            Y G   DIWS G  +  +L    P+       LF KI  G     P  ++      +  
Sbjct: 191 LYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFY-TPQYLNPSVISLLKH 249

Query: 93  CLQVNPNDRPTAAQLMEHPFVKRPLP 118
            LQV+P  R T   + EH + K+ LP
Sbjct: 250 MLQVDPMKRATIKDIREHEWFKQDLP 275

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 62.6 bits (153), Expect = 7e-13
 Identities = 17/88 (19%), Positives = 29/88 (32%), Gaps = 5/88 (5%)

Query: 36  GY-GLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELPPIP-DSVSRDARDFI 90
            +   P D+WS G  +  ML    P+                +    P   +       +
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 242

Query: 91  LKCLQVNPNDRPTAAQLMEHPFVKRPLP 118
            K L  NP+ R T   + +  +  +PL 
Sbjct: 243 HKILVENPSARITIPDIKKDRWYNKPLK 270

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 62.6 bits (153), Expect = 8e-13
 Identities = 28/134 (20%), Positives = 46/134 (34%), Gaps = 47/134 (35%)

Query: 23  NSLTDQVV-----------NSKNGGYGLPADIWSVGCTVLEMLTRCRPYF---GVEWALF 68
           +   D+V                  YG P D+W++GC   E+L+   P +        L+
Sbjct: 157 DYYDDEVATRWYRSPELLVGDTQ--YGPPVDVWAIGCVFAELLSG-VPLWPGKSDVDQLY 213

Query: 69  KIAR-------------GELP-----PIPD------------SVSRDARDFILKCLQVNP 98
            I +                       IPD            ++S  A   +  CL ++P
Sbjct: 214 LIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDP 273

Query: 99  NDRPTAAQLMEHPF 112
            +R T  QL+ HP+
Sbjct: 274 TERLTCEQLLHHPY 287

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 62.6 bits (153), Expect = 8e-13
 Identities = 33/130 (25%), Positives = 47/130 (36%), Gaps = 39/130 (30%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIAR-------------GELP---- 76
           Y    DIWS GC + EM+T  +P F     E  L  I                +LP    
Sbjct: 186 YSTSIDIWSCGCILAEMITG-KPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNP 244

Query: 77  ----------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHP-FVKRPLPT 119
                              + +  +  DF+   LQ+NP+ R +A Q + HP F +     
Sbjct: 245 NIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHHA 304

Query: 120 S-WGLPTPHH 128
           S  G  + HH
Sbjct: 305 SMGGSRSHHH 314

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 62.7 bits (153), Expect = 8e-13
 Identities = 26/115 (22%), Positives = 37/115 (32%), Gaps = 34/115 (29%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIAR-------------GELP---- 76
           Y    DIWS+ C   EML +  P F        LFKI                 LP    
Sbjct: 215 YSTSVDIWSIACIWAEMLMK-TPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQ 273

Query: 77  ------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHP-FVKRPLP 118
                        +   +  +  D +   L+++P  R +A   +EHP F      
Sbjct: 274 SFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDFD 328

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 62.3 bits (152), Expect = 1e-12
 Identities = 17/88 (19%), Positives = 29/88 (32%), Gaps = 5/88 (5%)

Query: 36  GY-GLPADIWSVGCTVLEMLTRCRPYFGVEW---ALFKIARGELPPIP-DSVSRDARDFI 90
            +   P D+WS G  +  ML    P+                +    P   +       +
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 242

Query: 91  LKCLQVNPNDRPTAAQLMEHPFVKRPLP 118
            K L  NP+ R T   + +  +  +PL 
Sbjct: 243 HKILVENPSARITIPDIKKDRWYNKPLK 270

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 61.5 bits (150), Expect = 2e-12
 Identities = 28/113 (24%), Positives = 41/113 (36%), Gaps = 35/113 (30%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYF-------------------GVEWALFKI----AR 72
            Y    D+WS GC + E+  R RP F                     +  L  I    AR
Sbjct: 199 KYSRAMDVWSCGCILAELFLR-RPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAR 257

Query: 73  G---ELPPIPD--------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
                LP  P          V+    D + + L  +P  R TA + +EHP+++
Sbjct: 258 EYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQ 310

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 60.4 bits (147), Expect = 4e-12
 Identities = 25/112 (22%), Positives = 39/112 (34%), Gaps = 33/112 (29%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYF---------------------------GVEWALF 68
            Y    D+W+ GC   EMLT  +  F                                ++
Sbjct: 201 NYTKAIDMWAAGCIFAEMLTG-KTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVY 259

Query: 69  KIARGELPPIP-----DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
                  P  P       +SR+A DF+ + L  +P DR TA + + HP++  
Sbjct: 260 IRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSI 311

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 60.4 bits (147), Expect = 5e-12
 Identities = 29/115 (25%), Positives = 43/115 (37%), Gaps = 39/115 (33%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWA--LFKIAR--------------------- 72
           Y    D+WS+GC +  M+ R  P+F G +    L +IA+                     
Sbjct: 208 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 267

Query: 73  -----GELPPIP----------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
                G                  VS +A DF+ K L+ +   R TA + MEHP+
Sbjct: 268 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 322

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 59.9 bits (146), Expect = 7e-12
 Identities = 33/126 (26%), Positives = 45/126 (35%), Gaps = 41/126 (32%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-------------------------GV----EWAL 67
           YG+  D+W+VGC + E+L R  P+                           +    ++  
Sbjct: 190 YGVGVDMWAVGCILAELLLR-VPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT 248

Query: 68  FKIARGELPPIP-----DSVSRDARDFILKCLQVNPNDRPTAAQLMEHP-FVKRPLPTSW 121
           FK      P IP      +   D  D I      NP  R TA Q ++   F  RP PT  
Sbjct: 249 FK----SFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPG 304

Query: 122 G-LPTP 126
             LP P
Sbjct: 305 CQLPRP 310

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 59.8 bits (145), Expect = 7e-12
 Identities = 19/106 (17%), Positives = 31/106 (29%), Gaps = 30/106 (28%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWA------LFKIARGELP------------- 76
            YG   D+WS+G T     T   P+   E        ++KI  G+               
Sbjct: 199 KYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGP 258

Query: 77  -------PIPDSVSRDARD----FILKCLQVNPNDRPTAAQLMEHP 111
                  P+  S+SR  +      +   L+ +        Q     
Sbjct: 259 IDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 60.0 bits (146), Expect = 8e-12
 Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 12/95 (12%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA-----LF-KIARGELPPIPDSV 82
           +V   + G+    D WS+G  + E+LT   P+           +  +I + E P  P  +
Sbjct: 231 IVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP-YPQEM 289

Query: 83  SRDARDFILKCLQVNPNDR----PT-AAQLMEHPF 112
           S  A+D I + L  +P  R    P  A ++ EH F
Sbjct: 290 SALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF 324

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 59.5 bits (145), Expect = 8e-12
 Identities = 30/115 (26%), Positives = 39/115 (33%), Gaps = 33/115 (28%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIAR-------------GELP---- 76
           Y    DIWS+GC   EM+TR R  F        LF+I R               +P    
Sbjct: 181 YSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239

Query: 77  --------PIPDSV---SRDARDFILKCLQVNPNDRPTAAQLMEHP-FVKRPLPT 119
                        V     D R  + + L  +PN R +A   + HP F     P 
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 59.5 bits (145), Expect = 9e-12
 Identities = 27/123 (21%), Positives = 37/123 (30%), Gaps = 32/123 (26%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-------------------------GVE----WAL 67
           Y  P D+WSVGC   EM  R +P F                                 A 
Sbjct: 196 YATPVDLWSVGCIFAEMFRR-KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAF 254

Query: 68  FKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHP-FVKRPLPT-SWGLPT 125
              +   +      +    +D +LKCL  NP  R +A   + HP F        +     
Sbjct: 255 HSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCKENLDSHL 314

Query: 126 PHH 128
           P  
Sbjct: 315 PPS 317

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 59.3 bits (144), Expect = 1e-11
 Identities = 17/82 (20%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIA----RGELPPIPDSVSRDARD 88
           +   Y    D++S G  + E++TR +P+  +    F+I      G  PP+  ++ +    
Sbjct: 176 EGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIES 235

Query: 89  FILKCLQVNPNDRPTAAQLMEH 110
            + +C   +P+ RP+  ++++ 
Sbjct: 236 LMTRCWSKDPSQRPSMEEIVKI 257

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 59.5 bits (144), Expect = 1e-11
 Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 11/91 (12%)

Query: 32  SKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV----EWALF-KIARGELPPIPDSVSRDA 86
            K   Y   AD +S+GC + ++L    P+       +  +        +  +PDS S + 
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-ELPDSFSPEL 421

Query: 87  RDFILKCLQVNPNDR-----PTAAQLMEHPF 112
           R  +   LQ + N R       A ++ E PF
Sbjct: 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPF 452

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 59.0 bits (143), Expect = 2e-11
 Identities = 22/109 (20%), Positives = 37/109 (33%), Gaps = 34/109 (31%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF----GVEWALFKI-------------------ARG 73
           Y    D+WS+GC   E++   +P F     ++  L +I                      
Sbjct: 219 YTPSIDLWSIGCVFGELILG-KPLFSGETSID-QLVRIIQIMGTPTKEQMIRMNPHYTEV 276

Query: 74  ELPPI---------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV 113
             P +         P+     A D + + L+  P+ R    + M HPF 
Sbjct: 277 RFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFF 325

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 58.9 bits (143), Expect = 2e-11
 Identities = 21/126 (16%), Positives = 40/126 (31%), Gaps = 47/126 (37%)

Query: 36  GYGLPADIWSVGCTVLEMLT-----------------------------------RCRPY 60
           G+ + +D+WS GC + E+ T                                       Y
Sbjct: 235 GWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKY 294

Query: 61  FGVEWALFKIARGE-----------LPPIPDSVSRDA-RDFILKCLQVNPNDRPTAAQLM 108
              +                       P+   +  +   DF+   LQ++P  RP+ A+L+
Sbjct: 295 VNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELL 354

Query: 109 EHPFVK 114
           +H F++
Sbjct: 355 KHKFLE 360

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 58.9 bits (143), Expect = 2e-11
 Identities = 25/113 (22%), Positives = 38/113 (33%), Gaps = 35/113 (30%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYF----------------GV--EWALFKIA------ 71
           G+    D+WS GC + EM  R +  F                G      +   +      
Sbjct: 210 GFTKLVDMWSAGCVMAEMFNR-KALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARD 268

Query: 72  --RGELPPIPD--------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
             R  L  +P         +    A D I K L+ NP  R +  Q + HP+ +
Sbjct: 269 YLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFE 321

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 58.3 bits (142), Expect = 2e-11
 Identities = 30/107 (28%), Positives = 39/107 (36%), Gaps = 32/107 (29%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIAR-------------GELP---- 76
           Y    DIWSVGC   EM+    P F        L +I R              ELP    
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG-TPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236

Query: 77  --------PIPDSV---SRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
                   P    +        D + K L+++PN R TA Q +EH +
Sbjct: 237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 58.6 bits (142), Expect = 3e-11
 Identities = 23/108 (21%), Positives = 34/108 (31%), Gaps = 34/108 (31%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF----GVEWALFKI-------------------ARG 73
           Y    D+WS GC + E+L   +P F    GV+  L +I                      
Sbjct: 234 YTSSIDVWSAGCVLAELLLG-QPIFPGDSGVD-QLVEIIKVLGTPTREQIREMNPNYTEF 291

Query: 74  ELPPIP---------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
           + P I               +A     + L+  P  R T  +   H F
Sbjct: 292 KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 339

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 58.5 bits (142), Expect = 3e-11
 Identities = 23/113 (20%), Positives = 34/113 (30%), Gaps = 37/113 (32%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF----GVEWALFKI-------------------ARG 73
           Y    DIWSVGC   EM+    P F         L +I                      
Sbjct: 209 YTTAVDIWSVGCIFAEMMLG-EPIFRGDNSAG-QLHEIVRVLGCPSREVLRKLNPSHTDV 266

Query: 74  ELPPIP------------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
           +L                   +++A D +   LQ  P +R    + + HP+  
Sbjct: 267 DLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFD 319

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 58.1 bits (141), Expect = 3e-11
 Identities = 28/146 (19%), Positives = 43/146 (29%), Gaps = 61/146 (41%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFK-------IARGE--LPPIPDSVSRDA 86
           G+  P D+WS+GC + E         G  + LF+       +   E  L PIP  +    
Sbjct: 215 GWAQPCDVWSIGCILFEYYR------G--FTLFQTHENREHLVMMEKILGPIPSHMIHRT 266

Query: 87  R--------------------------------------------DFILKCLQVNPNDRP 102
           R                                            D + + L+ +P  R 
Sbjct: 267 RKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRI 326

Query: 103 TAAQLMEHPFVKRPLPTSWGLPTPHH 128
           T A+ + HPF     P      T  +
Sbjct: 327 TLAEALLHPFFAGLTPEERSFHTSRN 352

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 58.1 bits (141), Expect = 3e-11
 Identities = 32/112 (28%), Positives = 42/112 (37%), Gaps = 34/112 (30%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYF----------------GV--EWALFKI----ARG 73
           GY    DIWSVGC + EML+  RP F                G   +  L  I    AR 
Sbjct: 208 GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 266

Query: 74  ---ELPPIPD--------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
               LP            +    A D + K L  NP+ R    Q + HP+++
Sbjct: 267 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 58.1 bits (141), Expect = 4e-11
 Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 34/112 (30%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYF-GVEWA--LFKI-------------------ARG 73
            Y    DIWSVGC + EMLT  +  F G ++   L +I                   A+ 
Sbjct: 200 HYNQTVDIWSVGCIMAEMLTG-KTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKS 258

Query: 74  ---ELPPIPD--------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
               LP  P           S  A D + K L+++ + R TAAQ + HPF +
Sbjct: 259 YIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 58.0 bits (141), Expect = 4e-11
 Identities = 28/128 (21%), Positives = 46/128 (35%), Gaps = 37/128 (28%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-------------------------GVE----WAL 67
           YG P D+W  GC + EM TR  P                            V+    +  
Sbjct: 206 YGPPIDLWGAGCIMAEMWTR-SPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEK 264

Query: 68  FKIARGELPPIPDSV-----SRDARDFILKCLQVNPNDRPTAAQLMEHP-FVKRPLPTSW 121
            ++ +G+   + D +        A D I K L ++P  R  +   + H  F   P+P+  
Sbjct: 265 LELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSDL 324

Query: 122 -GLPTPHH 128
            G+ + H 
Sbjct: 325 KGMLSTHL 332

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 57.7 bits (140), Expect = 4e-11
 Identities = 18/87 (20%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIA-----RGELPPIPDSVS 83
            + ++   Y   AD +S    +  +LT   P+    +   K        G  P IP+   
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCP 256

Query: 84  RDARDFILKCLQVNPNDRPTAAQLMEH 110
              R+ I  C   +P  RP  + +++ 
Sbjct: 257 PRLRNVIELCWSGDPKKRPHFSYIVKE 283

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 57.6 bits (140), Expect = 4e-11
 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 8/84 (9%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARGELPPIPDSVSRDARDFILKC 93
           G+   AD WS G  + EMLT   P+ G         I + +L  +P  +S +A+  +   
Sbjct: 202 GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG-MPQFLSPEAQSLLRML 260

Query: 94  LQVNPNDR----PT-AAQLMEHPF 112
            + NP +R    P    ++  H F
Sbjct: 261 FKRNPANRLGAGPDGVEEIKRHSF 284

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 57.6 bits (140), Expect = 4e-11
 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 8/84 (9%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARGELPPIPDSVSRDARDFILKC 93
           G+    D WS+G  + +MLT   P+ G        KI + +L  +P  ++++ARD + K 
Sbjct: 197 GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN-LPPYLTQEARDLLKKL 255

Query: 94  LQVNPNDR----PT-AAQLMEHPF 112
           L+ N   R    P  A ++  HPF
Sbjct: 256 LKRNAASRLGAGPGDAGEVQAHPF 279

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 57.7 bits (140), Expect = 5e-11
 Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 34/112 (30%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYF-GVEWA--LFKI-------------------ARG 73
            Y    DIWSVGC + EM+T  +  F G +    L +I                   A+ 
Sbjct: 202 RYTQTVDIWSVGCIMAEMITG-KTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKN 260

Query: 74  ---ELPPIPD--------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
               LP +          + S  A + + K L ++   R TA + + HP+ +
Sbjct: 261 YMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 312

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 57.3 bits (139), Expect = 6e-11
 Identities = 30/112 (26%), Positives = 41/112 (36%), Gaps = 34/112 (30%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYF-GVEWA--LFKI-------------------ARG 73
            Y    DIWSVGC + E+LT  R  F G +    L  I                   AR 
Sbjct: 206 HYNQTVDIWSVGCIMAELLTG-RTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 264

Query: 74  ---ELPPIPD--------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
               L  +P           +  A D + K L ++ + R TAAQ + H +  
Sbjct: 265 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 316

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 57.0 bits (138), Expect = 8e-11
 Identities = 27/108 (25%), Positives = 40/108 (37%), Gaps = 34/108 (31%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF----GVEWALFKI-------------------ARG 73
           Y    DIWS GC + E++   +P F    G++  L +I                      
Sbjct: 219 YTTNIDIWSTGCVMAELMQG-QPLFPGESGID-QLVEIIKVLGTPSREQIKTMNPNYMEH 276

Query: 74  ELPPIP---------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
           + P I               DA D I + L+  P+ R TA + + HPF
Sbjct: 277 KFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPF 324

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 56.8 bits (138), Expect = 8e-11
 Identities = 31/122 (25%), Positives = 37/122 (30%), Gaps = 33/122 (27%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIAR-------------GELP---- 76
           Y    D+W VGC   EM T  RP F    VE  L  I R                     
Sbjct: 178 YSTQIDMWGVGCIFYEMATG-RPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKT 236

Query: 77  ---------PIPDSVSR---DARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 124
                     +     R   D  D + K LQ    +R +A   M+HPF          LP
Sbjct: 237 YNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHKLP 296

Query: 125 TP 126
             
Sbjct: 297 DT 298

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 57.1 bits (138), Expect = 9e-11
 Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 10/90 (11%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG-----VEWALFKIARGELPPIPDSVSRDAR 87
           KN  Y    D W++GC + EM+    P+           + ++ +       +  S  AR
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQAR 417

Query: 88  DFILKCLQVNPNDR-----PTAAQLMEHPF 112
               + L  +P +R      +A ++ EHP 
Sbjct: 418 SLCSQLLCKDPAERLGCRGGSAREVKEHPL 447

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 56.8 bits (138), Expect = 9e-11
 Identities = 28/108 (25%), Positives = 39/108 (36%), Gaps = 33/108 (30%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIAR-------------GELP---- 76
           Y    DIWS+GC   EM+T  +P F     +  L KI                ELP    
Sbjct: 197 YSTSVDIWSIGCIFAEMITG-KPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ 255

Query: 77  ---------PIPDSV---SRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
                    P    +    ++  D +   L  +PN R +A   M HP+
Sbjct: 256 RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 57.0 bits (138), Expect = 9e-11
 Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 10/92 (10%)

Query: 36  GY-GLPADIWSVGCTVLEMLTRCRPYFGVEW-ALFK-----IARGELPPIPDS--VSRDA 86
            Y G  AD+WS G T+  ML    P+   E    ++     I   +   IPD   +S + 
Sbjct: 193 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYS-IPDDIRISPEC 251

Query: 87  RDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 118
              I +    +P  R +  ++  H +  + LP
Sbjct: 252 CHLISRIFVADPATRISIPEIKTHSWFLKNLP 283

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 56.5 bits (137), Expect = 1e-10
 Identities = 26/126 (20%), Positives = 38/126 (30%), Gaps = 45/126 (35%)

Query: 36  GYGLPADIWSVGCTVLEMLT--------------------------------RCRPYF-- 61
           G+  P D+WS+GC ++E                                   R R YF  
Sbjct: 210 GWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHH 269

Query: 62  -GVEWALFKIAR----------GELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 110
             ++W     A            E     D       D I K L+ +P  R T  + ++H
Sbjct: 270 DRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH 329

Query: 111 PFVKRP 116
           PF    
Sbjct: 330 PFFDLL 335

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 56.3 bits (136), Expect = 2e-10
 Identities = 21/92 (22%), Positives = 33/92 (35%), Gaps = 10/92 (10%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLT-----RCRPYFGVEWALFKIARGELPPIPDSVSRDAR 87
               Y    D +++G T+ EM+      R R        L +    +    PD  S  ++
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASK 421

Query: 88  DFILKCLQVNPNDR-----PTAAQLMEHPFVK 114
           DF    LQ +P  R      +   L  HP  +
Sbjct: 422 DFCEALLQKDPEKRLGFRDGSCDGLRTHPLFR 453

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 56.2 bits (136), Expect = 2e-10
 Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 3/73 (4%)

Query: 41  ADIWSVGCTVLEMLTRCRPYFGV--EWALFKIARGELPPIPD-SVSRDARDFILKCLQVN 97
           +D++++G    E+  R  P+     E  ++++  G  P +    + ++  D +L C    
Sbjct: 224 SDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFE 283

Query: 98  PNDRPTAAQLMEH 110
             +RPT  +LM+ 
Sbjct: 284 QEERPTFTKLMDM 296

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 56.1 bits (136), Expect = 2e-10
 Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 8/86 (9%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFG-VEWALF-KIARGELPPIPDSVSRDARDFIL 91
           + GY    D W++G  + EM     P+F      ++ KI  G++   P   S D +D + 
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKDLLR 270

Query: 92  KCLQVNPNDR-----PTAAQLMEHPF 112
             LQV+   R          +  H +
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKW 296

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 56.0 bits (136), Expect = 2e-10
 Identities = 27/105 (25%), Positives = 38/105 (36%), Gaps = 30/105 (28%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIAR-------------GELP---- 76
           Y  P D+WSVGC   EM  R +P F        L KI                 LP    
Sbjct: 196 YATPVDMWSVGCIFAEMFRR-KPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAF 254

Query: 77  ------PIPDSV---SRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
                 P+   V          +L+ L  NP+ R +A + ++H +
Sbjct: 255 PPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY 299

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 56.1 bits (136), Expect = 2e-10
 Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 7/83 (8%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARGELPPIPDSVSRDARDFILKC 93
            Y    D W +G  + EML    P++      ++  I    L  +  +++  AR  +   
Sbjct: 215 PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQ-LKPNITNSARHLLEGL 273

Query: 94  LQVNPNDR----PTAAQLMEHPF 112
           LQ +   R        ++  H F
Sbjct: 274 LQKDRTKRLGAKDDFMEIKSHVF 296

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 56.0 bits (136), Expect = 2e-10
 Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 10/91 (10%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARGELPPIPDSVSRDA 86
           VV++K   Y    D WS G  + EML    P++       + KI   EL   P   + D 
Sbjct: 174 VVSTK--PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAEL-RFPPFFNEDV 230

Query: 87  RDFILKCLQVNPNDR-----PTAAQLMEHPF 112
           +D + + +  + + R          +  HP+
Sbjct: 231 KDLLSRLITRDLSQRLGNLQNGTEDVKNHPW 261

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 55.1 bits (133), Expect = 4e-10
 Identities = 26/97 (26%), Positives = 36/97 (37%), Gaps = 10/97 (10%)

Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG-VEWALF-KIARGEL----PPI 78
           L         G YG   D W++G    EM     P++       + KI   +     P +
Sbjct: 235 LQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLV 294

Query: 79  PDSVSRDARDFILKCLQVNPNDR---PTAAQLMEHPF 112
            + V  +ARDFI + L   P  R     A     HPF
Sbjct: 295 DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPF 330

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 54.9 bits (133), Expect = 4e-10
 Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 4/80 (5%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARGELPPIPDSVSRDARDFILKC 93
            Y    D WS G  + EML    P+ G  E  LF  I        P  + ++A+D ++K 
Sbjct: 194 KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPF-YPRWLEKEAKDLLVKL 252

Query: 94  LQVNPNDRPTAAQ-LMEHPF 112
               P  R      + +HP 
Sbjct: 253 FVREPEKRLGVRGDIRQHPL 272

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 55.1 bits (133), Expect = 4e-10
 Identities = 23/125 (18%), Positives = 37/125 (29%), Gaps = 45/125 (36%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYF-------------------------------- 61
             GY    DIWSVGC + EM+      F                                
Sbjct: 200 GMGYKENVDIWSVGCIMGEMIKG-GVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR 258

Query: 62  ----------GVEWA-LFKIARGE-LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLME 109
                     G  +  LF               +  ARD + K L ++ + R +  + ++
Sbjct: 259 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318

Query: 110 HPFVK 114
           HP++ 
Sbjct: 319 HPYIN 323

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 54.9 bits (133), Expect = 4e-10
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 8/84 (9%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARGELPPIPDSVSRDARDFILKC 93
            YG   D W +G  + EM+    P++      LF  I   E+   P ++S +A+  +   
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR-FPRTLSPEAKSLLAGL 239

Query: 94  LQVNPNDR----PTAAQ-LMEHPF 112
           L+ +P  R    P+ A+ +MEH F
Sbjct: 240 LKKDPKQRLGGGPSDAKEVMEHRF 263

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 54.6 bits (132), Expect = 5e-10
 Identities = 16/78 (20%), Positives = 39/78 (50%), Gaps = 9/78 (11%)

Query: 41  ADIWSVGCTVL-EMLTRCRPYFGV---EWALFKIARGELPP----IPDSVSRDARDFILK 92
           +D+++ G  VL E++T   PY  +   +  +  + RG L P    +  +  +  +  + +
Sbjct: 206 SDVYAFG-IVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAE 264

Query: 93  CLQVNPNDRPTAAQLMEH 110
           CL+   ++RP+  +++  
Sbjct: 265 CLKKKRDERPSFPRILAE 282

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 54.5 bits (131), Expect = 6e-10
 Identities = 24/125 (19%), Positives = 39/125 (31%), Gaps = 45/125 (36%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYF-------------------------------- 61
             GY    DIWSVGC + EM+   +  F                                
Sbjct: 237 GMGYKENVDIWSVGCIMGEMVRH-KILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 295

Query: 62  ----------GVEWA-LFKIARGE-LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLME 109
                     G+ +  LF  +            +  ARD + K L ++P  R +    ++
Sbjct: 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355

Query: 110 HPFVK 114
           HP++ 
Sbjct: 356 HPYIN 360

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 54.1 bits (130), Expect = 9e-10
 Identities = 19/110 (17%), Positives = 31/110 (28%), Gaps = 30/110 (27%)

Query: 31  NSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA------LFKIARGELP-------- 76
                 YG   D+WS+G T     T   P+   E        ++KI  G+          
Sbjct: 194 KDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQK 253

Query: 77  ------------PIPDSVSRDARD----FILKCLQVNPNDRPTAAQLMEH 110
                       P+  S+SR  +      +   L+ +        Q    
Sbjct: 254 AENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 53.8 bits (129), Expect = 1e-09
 Identities = 27/127 (21%), Positives = 40/127 (31%), Gaps = 51/127 (40%)

Query: 36  GYGLPADIWSVGCTVLEMLT---------------------------------------R 56
           GY  PADIWS  C   E+ T                                        
Sbjct: 269 GYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKY 328

Query: 57  CRPYFGVE-----------WALFKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAA 105
            + +F  +           W LF++   E        +    DF+L  L++ P  R TAA
Sbjct: 329 SKEFFTKKGDLKHITKLKPWGLFEVLV-EKYEWSQEEAAGFTDFLLPMLELIPEKRATAA 387

Query: 106 QLMEHPF 112
           + + HP+
Sbjct: 388 ECLRHPW 394

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 53.8 bits (130), Expect = 1e-09
 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 8/84 (9%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARGELPPIPDSVSRDARDFILKC 93
            YG   D W+ G  + EML    P+ G  E  LF  I    +   P S+S++A       
Sbjct: 197 PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA-YPKSMSKEAVAICKGL 255

Query: 94  LQVNPNDR----PTAAQ-LMEHPF 112
           +  +P  R    P   + + EH F
Sbjct: 256 MTKHPGKRLGCGPEGERDIKEHAF 279

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 54.0 bits (130), Expect = 1e-09
 Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 8/84 (9%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARGELPPIPDSVSRDARDFILKC 93
            YG   D W +G  + EM+    P++      LF  I   E+   P ++  +A+  +   
Sbjct: 325 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR-FPRTLGPEAKSLLSGL 383

Query: 94  LQVNPNDR----PT-AAQLMEHPF 112
           L+ +P  R       A ++M+H F
Sbjct: 384 LKKDPKQRLGGGSEDAKEIMQHRF 407

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 53.8 bits (130), Expect = 1e-09
 Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 9/85 (10%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARGELPPIPDSVSRDARDFILKC 93
            YG   D W++G  + EML    P+    E  LF  I   E+   P  +  DA   +   
Sbjct: 200 LYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVV-YPTWLHEDATGILKSF 258

Query: 94  LQVNPNDR----PTAA--QLMEHPF 112
           +  NP  R           ++ HPF
Sbjct: 259 MTKNPTMRLGSLTQGGEHAILRHPF 283

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 53.2 bits (128), Expect = 2e-09
 Identities = 26/144 (18%), Positives = 44/144 (30%), Gaps = 60/144 (41%)

Query: 36  GYGLPADIWSVGCTV---------------LEML------------------TRCRPYFG 62
            YG+P D+WS+GC +                + L                   R + +  
Sbjct: 275 RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVS 334

Query: 63  VEWALFKIARGELP--PIPDSVSRDAR-------------------------DFILKCLQ 95
            +          L    +  +  R  R                         DF+ +CL+
Sbjct: 335 SKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLE 394

Query: 96  VNPNDRPTAAQLMEHPFVKRPLPT 119
            +P  R T  Q + HP+++R LP 
Sbjct: 395 WDPAVRMTPGQALRHPWLRRRLPK 418

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 52.9 bits (127), Expect = 2e-09
 Identities = 29/142 (20%), Positives = 42/142 (29%), Gaps = 51/142 (35%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF------------GVEWALFKIAR------------ 72
           Y    DIW++GC   E+LT   P F                 L +I              
Sbjct: 213 YTKAIDIWAIGCIFAELLTS-EPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWED 271

Query: 73  -GELP------------------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQL 107
             ++P                                 A   + K L ++P  R T+ Q 
Sbjct: 272 IKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQA 331

Query: 108 MEHP-FVKRPLPTSWGLPTPHH 128
           M+ P F++ PLPTS        
Sbjct: 332 MQDPYFLEDPLPTSDVFAGCQI 353

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 52.3 bits (125), Expect = 4e-09
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 8/84 (9%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARGELPPIPDSVSRDARDFILKC 93
            YG   D W+ G  + EML    P+ G  E  LF  I    +   P S+S++A       
Sbjct: 518 PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA-YPKSMSKEAVAICKGL 576

Query: 94  LQVNPNDR-----PTAAQLMEHPF 112
           +  +P  R          + EH F
Sbjct: 577 MTKHPGKRLGCGPEGERDIKEHAF 600

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 51.9 bits (125), Expect = 5e-09
 Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 5/92 (5%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGEL-PPIPDSVSRDARDF 89
           ++      +D++S G  + E+ T  +P+  +     +  +        IP +++      
Sbjct: 212 RDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAI 271

Query: 90  ILKCLQVNPNDRPTAAQLMEH--PFVKRPLPT 119
           I  C    P  RP+ A +M+   P +K  +P 
Sbjct: 272 IEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 52.0 bits (125), Expect = 5e-09
 Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 18/94 (19%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWA----------LF-KIARGELPPIPDSVSR 84
            YG   D W++G  + EM+    P+  V  +          LF  I   ++  IP S+S 
Sbjct: 229 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR-IPRSLSV 287

Query: 85  DARDFILKCLQVNPNDR------PTAAQLMEHPF 112
            A   +   L  +P +R         A +  HPF
Sbjct: 288 KAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF 321

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 51.8 bits (125), Expect = 5e-09
 Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 18/94 (19%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWA----------LF-KIARGELPPIPDSVSR 84
            YG   D W++G  + EM+    P+  V  +          LF  I   ++  IP S+S 
Sbjct: 186 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR-IPRSLSV 244

Query: 85  DARDFILKCLQVNPNDR------PTAAQLMEHPF 112
            A   +   L  +P +R         A +  HPF
Sbjct: 245 KAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF 278

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 51.5 bits (124), Expect = 6e-09
 Identities = 17/81 (20%), Positives = 36/81 (44%), Gaps = 3/81 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIA-RGELPPIPDSVSRDARDF 89
           +   +   +D+WS G  + E+LT   P+ G++     + +A      PIP +        
Sbjct: 187 RASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKL 246

Query: 90  ILKCLQVNPNDRPTAAQLMEH 110
           +  C   +P+ RP+   +++ 
Sbjct: 247 MEDCWNPDPHSRPSFTNILDQ 267

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 51.3 bits (123), Expect = 9e-09
 Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 8/93 (8%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARGE----LPPIPDS 81
           Q +    G YG   D WS+G  + EML    P++       + KI   +     P     
Sbjct: 249 QAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTD 308

Query: 82  VSRDARDFILKCLQVNPN--DRPTAAQLMEHPF 112
           VS +A+D I + +    +   +       +HPF
Sbjct: 309 VSENAKDLIRRLICSREHRLGQNGIEDFKKHPF 341

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 51.1 bits (123), Expect = 9e-09
 Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 3/83 (3%)

Query: 31  NSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIA-RGELPPIPDSVSRDAR 87
                     AD+WS    + E++TR  P+  +       K+A  G  P IP  +S    
Sbjct: 182 KKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVS 241

Query: 88  DFILKCLQVNPNDRPTAAQLMEH 110
             +  C+  +P  RP    ++  
Sbjct: 242 KLMKICMNEDPAKRPKFDMIVPI 264

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 50.5 bits (121), Expect = 2e-08
 Identities = 26/129 (20%), Positives = 41/129 (31%), Gaps = 52/129 (40%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRP------------------------------------ 59
            Y    D+WS+GC + E+L   +P                                    
Sbjct: 207 KYTKGIDMWSLGCILGEILCG-KPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKT 265

Query: 60  --------------YFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAA 105
                              +  +K    ++ P  D  + +A D + K LQ NPN R +A 
Sbjct: 266 MIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKAD-CNEEALDLLDKLLQFNPNKRISAN 324

Query: 106 QLMEHPFVK 114
             ++HPFV 
Sbjct: 325 DALKHPFVS 333

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 50.0 bits (119), Expect = 2e-08
 Identities = 13/80 (16%), Positives = 19/80 (23%), Gaps = 5/80 (6%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDA-RDFILKCL 94
            +    D + V  TV  ML         E    K               D   +F    L
Sbjct: 261 PWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEG----LFRRLPHLDMWNEFFHVML 316

Query: 95  QVNPNDRPTAAQLMEHPFVK 114
            +       +  L+     K
Sbjct: 317 NIPDCHHLPSLDLLRQKLKK 336

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 50.1 bits (120), Expect = 2e-08
 Identities = 9/31 (29%), Positives = 14/31 (45%)

Query: 88  DFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 118
           D IL+ L  +P  R      ++H F K+   
Sbjct: 351 DLILRMLDYDPKTRIQPYYALQHSFFKKTAD 381

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 37.4 bits (87), Expect = 6e-04
 Identities = 10/20 (50%), Positives = 14/20 (70%)

Query: 36  GYGLPADIWSVGCTVLEMLT 55
            Y L  D+WS+GC ++EM T
Sbjct: 234 PYDLAIDMWSLGCILVEMHT 253

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 48.4 bits (116), Expect = 7e-08
 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 8/74 (10%)

Query: 42  DIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGELPPIP----DSVSRDARDFILKCL 94
           DI+S+G  + EML    P+ G   V  A+ K  +  +P +       + +   + IL+  
Sbjct: 194 DIYSIGIVLYEMLVGEPPFNGETAVSIAI-KHIQDSVPNVTTDVRKDIPQSLSNVILRAT 252

Query: 95  QVNPNDRPTAAQLM 108
           + +  +R    Q M
Sbjct: 253 EKDKANRYKTIQEM 266

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 47.8 bits (113), Expect = 2e-07
 Identities = 13/87 (14%), Positives = 22/87 (25%), Gaps = 2/87 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRDARDFI 90
           +   Y +  D WS G    E +T  RP+             R +                
Sbjct: 196 EQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVK 255

Query: 91  LKCLQVNPNDRPTAAQLMEHPFVKRPL 117
              +   PN            +++  L
Sbjct: 256 FSSVLPTPNHLSGILAGKLERWLQCML 282

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 7/73 (9%)

Query: 42  DIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGELPPIPD---SVSRDARDFILKCLQ 95
           D++S+GC + E+LT   P+ G   V  A  +  R +  P       +S D    +LK L 
Sbjct: 201 DVYSLGCVLYEVLTGEPPFTGDSPVSVAY-QHVREDPIPPSARHEGLSADLDAVVLKALA 259

Query: 96  VNPNDRPTAAQLM 108
            NP +R   A  M
Sbjct: 260 KNPENRYQTAAEM 272

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 46.6 bits (111), Expect = 3e-07
 Identities = 17/96 (17%), Positives = 32/96 (33%), Gaps = 30/96 (31%)

Query: 41  ADIWSVGCTVLEMLTRCRPYFG----------------------VEWALFKIARGELPPI 78
            D++++G  + E+ +RC    G                       E  + K  R   P +
Sbjct: 219 IDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKR---PVL 275

Query: 79  PDSVSRDA-----RDFILKCLQVNPNDRPTAAQLME 109
            D   + A      + I +C   +   R +A  + E
Sbjct: 276 RDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE 311

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 45.8 bits (109), Expect = 6e-07
 Identities = 12/81 (14%), Positives = 25/81 (30%), Gaps = 4/81 (4%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW----ALFKIARGELPPIPDSVSRDARD 88
               Y    D++S G  + E++ R                 +        P +       
Sbjct: 195 NGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFP 254

Query: 89  FILKCLQVNPNDRPTAAQLME 109
             ++C  ++P  RP+  +L  
Sbjct: 255 ITVRCCDLDPEKRPSFVKLEH 275

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 45.4 bits (108), Expect = 8e-07
 Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 13/96 (13%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWA--LFKIARGE 74
           RW    SL D V  +        +D+WS G  + E+ T    PY G+     L  +  G 
Sbjct: 205 RWMSPESLKDGVFTTY-------SDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 257

Query: 75  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 110
           L   PD+      + +  C Q NP  RP+  +++  
Sbjct: 258 LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 45.1 bits (107), Expect = 1e-06
 Identities = 10/77 (12%), Positives = 21/77 (27%), Gaps = 8/77 (10%)

Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEW-----ALFKIARGELPP---IPDSVSRDARDFILK 92
            DI  +G ++  +L    P              +   G+      I   +         +
Sbjct: 183 DDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAAR 242

Query: 93  CLQVNPNDRPTAAQLME 109
            +Q +   R  +  L  
Sbjct: 243 SVQGDGGIRSASTLLNL 259

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 45.1 bits (107), Expect = 1e-06
 Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 9/87 (10%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARGELP---PIPDSVSRDARD 88
           +G YG   D WSVG  + EML    P++       + KI   +     P  + +S++A++
Sbjct: 247 DGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKN 306

Query: 89  FILKCLQVNPNDR---PTAAQLMEHPF 112
            I      +   R       ++  H F
Sbjct: 307 LI-CAFLTDREVRLGRNGVEEIKRHLF 332

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 45.2 bits (107), Expect = 1e-06
 Identities = 14/68 (20%), Positives = 24/68 (35%), Gaps = 5/68 (7%)

Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQVNPND 100
            DI++VG T+  +        G            +    DS  R     + + +  +P  
Sbjct: 257 TDIYTVGRTLAALTLDLPTRNGRYVDGLP-EDDPVLKTYDSYGR----LLRRAIDPDPRQ 311

Query: 101 RPTAAQLM 108
           R T A+ M
Sbjct: 312 RFTTAEEM 319

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 44.7 bits (106), Expect = 2e-06
 Identities = 25/139 (17%), Positives = 33/139 (23%), Gaps = 60/139 (43%)

Query: 37  YGLPADIWSVGCTVLEMLT----------RCRPYF-GVEWALFKIARGELPPIPDSV--- 82
           Y    DIWS GC   E+L              P F G         R        S    
Sbjct: 229 YTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQ 288

Query: 83  --------------------SRDARDFIL--------------------------KCLQV 96
                                 +   +I                             L+ 
Sbjct: 289 LNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKF 348

Query: 97  NPNDRPTAAQLMEHPFVKR 115
           NPN R T  Q ++HP++K 
Sbjct: 349 NPNKRITIDQALDHPYLKD 367

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 44.6 bits (106), Expect = 2e-06
 Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 4/72 (5%)

Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEWAL-FKIARGELPPIPD---SVSRDARDFILKCLQV 96
           ADI+++ C + E LT   PY G + ++        +P        +       I + +  
Sbjct: 216 ADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAK 275

Query: 97  NPNDRPTAAQLM 108
           NP DR      +
Sbjct: 276 NPEDRYVTCGDL 287

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 44.4 bits (105), Expect = 2e-06
 Identities = 29/165 (17%), Positives = 39/165 (23%), Gaps = 76/165 (46%)

Query: 25  LTDQVV-----------NSKNGGYGLPADIWSVGCTVLEMLTRC----------RPYF-G 62
           LT  VV             +N  Y    D+WS+GC   E+L              P F G
Sbjct: 240 LTGHVVTRWYRAPELILLQEN--YTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPG 297

Query: 63  VEWALFKIARGELPPIPDSV--------------------------SRDARDFIL----- 91
                    +                                      DA+ +I      
Sbjct: 298 SSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKR 357

Query: 92  ---------------------KCLQVNPNDRPTAAQLMEHPFVKR 115
                                + L  NPN R T  + + HPF K 
Sbjct: 358 EGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKE 402

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 43.9 bits (104), Expect = 3e-06
 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 13/96 (13%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWA--LFKIARGE 74
           +W    SL D +           +D+W+ G T+ E++TR   PY G+E A     +  G 
Sbjct: 204 KWLALESLADNLYTVH-------SDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGN 256

Query: 75  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 110
               P     +  D + +C   +P  RP+   L   
Sbjct: 257 RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRME 292

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 44.1 bits (104), Expect = 3e-06
 Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 13/95 (13%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGV--EWALFKIARGE 74
           +W    S+  +   S        +D+W  G  + E+L    +P+ GV     + +I  GE
Sbjct: 557 KWMAPESINFRRFTSA-------SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 609

Query: 75  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLME 109
             P+P +        + KC   +P+ RP   +L  
Sbjct: 610 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 644

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 44.0 bits (104), Expect = 3e-06
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 42  DIWSVGCTVLEMLTRCR-PYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           D+WS G  + E+ T+ R PY G+     L ++ RG   P P        D + +C +  P
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP 422

Query: 99  NDRPTAAQLME 109
            +RPT   L  
Sbjct: 423 EERPTFEYLQA 433

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 43.4 bits (103), Expect = 5e-06
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)

Query: 42  DIWSVGCTVLEMLTRC-RPYFGVEWA--LFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           D+WS G TV E++T   +PY G+  +     + +GE  P P   + D    + KC  ++ 
Sbjct: 201 DVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDA 260

Query: 99  NDRPTAAQLMEH 110
           + RP   +L+  
Sbjct: 261 DSRPKFRELIIE 272

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 43.2 bits (102), Expect = 6e-06
 Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 25/107 (23%)

Query: 27  DQVVNSKNGGYGLPADIWSVGCTVL-EMLTRCR----------PYFGVEWALFKIA---- 71
           D+ +N  +    + AD++S G  +L E+  RC           PY  +  +         
Sbjct: 219 DESLNRNHFQSYIMADMYSFGL-ILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMRE 277

Query: 72  ----RGELPPIPDSVSRDA-----RDFILKCLQVNPNDRPTAAQLME 109
               +   P  P+  S D         + +C   NP  R TA ++ +
Sbjct: 278 IVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKK 324

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 43.0 bits (102), Expect = 7e-06
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 3/71 (4%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGV--EWALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           D+W  G  + E+L    +P+ GV     + +I  GE  P+P +        + KC   +P
Sbjct: 199 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 258

Query: 99  NDRPTAAQLME 109
           + RP   +L  
Sbjct: 259 SRRPRFTELKA 269

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 42.7 bits (101), Expect = 8e-06
 Identities = 17/96 (17%), Positives = 39/96 (40%), Gaps = 13/96 (13%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWA--LFKIARGE 74
           RW    S+      ++       +D+W+ G  + E+ +    PY+G+     ++ +  G 
Sbjct: 241 RWMPPESIFYNRYTTE-------SDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGN 293

Query: 75  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 110
           +   P++   +  + +  C    P DRP+   +   
Sbjct: 294 ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRI 329

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 42.6 bits (100), Expect = 9e-06
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 42  DIWSVGCTVLEMLTRCR-PYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           D+WS G  + E+ T+ R PY G+     L ++ RG   P P        D + +C +  P
Sbjct: 446 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP 505

Query: 99  NDRPTAAQLME 109
            +RPT   L  
Sbjct: 506 EERPTFEYLQA 516

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 42.3 bits (100), Expect = 1e-05
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 13/96 (13%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWA--LFKIARGE 74
           +W    SL D+V  SK       +D+W+ G T+ E+ TR   PY GV+       +  G 
Sbjct: 214 KWIAIESLADRVYTSK-------SDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGH 266

Query: 75  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 110
               P+    +  + +  C + +P DRPT + L   
Sbjct: 267 RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ 302

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 1e-05
 Identities = 25/135 (18%), Positives = 43/135 (31%), Gaps = 30/135 (22%)

Query: 3   RETVEGLGNALRRKWHVSRW-NSLT--DQVVNSKNGGYGLPADIW---SVGCTVLEMLTR 56
           +  +  +   LRR      + N L     V N+K          W   ++ C +L + TR
Sbjct: 224 KLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAK---------AWNAFNLSCKIL-LTTR 273

Query: 57  CRPYFGVEWALFKIARGELPPIPDSVS---RDARDFILKCLQVNPNDRPTAAQLMEHPFV 113
              +  V   L       +     S++    + +  +LK L   P D P       +P  
Sbjct: 274 ---FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT-NPRR 329

Query: 114 -------KRPLPTSW 121
                   R    +W
Sbjct: 330 LSIIAESIRDGLATW 344

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 42.3 bits (100), Expect = 1e-05
 Identities = 20/104 (19%), Positives = 34/104 (32%), Gaps = 25/104 (24%)

Query: 30  VNSKNGGYGLPADIWSVGCTVL-EMLTRCR----------PYFGV--------EWALFKI 70
           +           DIW+ G  VL E+  R            P++ V        +      
Sbjct: 193 IQVDCFDSYKRVDIWAFG-LVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVC 251

Query: 71  ARGELPPIPDSVSRDA-----RDFILKCLQVNPNDRPTAAQLME 109
              + P IP+    D         + +C   NP+ R TA ++ +
Sbjct: 252 VDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 295

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 42.3 bits (100), Expect = 1e-05
 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGVEWA--LFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           D+WS G TV E++T    PY G+  A     + +GE    P   + D    ++KC  ++ 
Sbjct: 199 DVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDE 258

Query: 99  NDRPTAAQLMEH 110
           N RPT  +L   
Sbjct: 259 NIRPTFKELANE 270

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGVEWA--LFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           D+WS G T+ E L+   +PY  ++    +  I +G+    P     +    +  C     
Sbjct: 195 DVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKW 254

Query: 99  NDRPTAAQLME 109
            DRP    + +
Sbjct: 255 EDRPDFLTVEQ 265

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 41.9 bits (99), Expect = 2e-05
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 3/72 (4%)

Query: 42  DIWSVGCTVLEMLTRC-RPYFGVEWA--LFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           D+WS G TV E++T   +PY G+  +     + +GE  P P   + D    ++KC  ++ 
Sbjct: 201 DVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA 260

Query: 99  NDRPTAAQLMEH 110
           + RP   +L+  
Sbjct: 261 DSRPKFRELIIE 272

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 41.9 bits (99), Expect = 2e-05
 Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 13/96 (13%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWA--LFKIARGE 74
           +W    +L D+V   +       +D+WS G  + E+ T    PY G+        +  G 
Sbjct: 224 KWMAPEALFDRVYTHQ-------SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH 276

Query: 75  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 110
               P + + +    +  C    P+ RPT  QL+E 
Sbjct: 277 RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 41.5 bits (98), Expect = 2e-05
 Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 42  DIWSVGCTVLEMLTRCR-PYFGVEWA--LFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           D+WS G  + E+ T  + P++ +     +  I +G     P +   +    +  C Q  P
Sbjct: 242 DVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREP 301

Query: 99  NDRPTAAQLMEH 110
             R +   +   
Sbjct: 302 QQRHSIKDVHAR 313

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 41.5 bits (98), Expect = 2e-05
 Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 13/96 (13%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWA--LFKIARGE 74
           +W    SL  Q   +K       +D+WS G  + E++TR   PY  V        + +G 
Sbjct: 197 KWMALESLQTQKFTTK-------SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 249

Query: 75  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 110
               P+       + +LKC       RP+ ++L+  
Sbjct: 250 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 285

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 41.3 bits (97), Expect = 2e-05
 Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 23/106 (21%)

Query: 27  DQVVNSKNGGYGLPADIWSVGCTVLEMLTRCR----------PYFGVEWALFKIA----- 71
           D  +N K+      ADI+++G    E+  RC           PY+ +  +   +      
Sbjct: 224 DDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKV 283

Query: 72  ---RGELPPIPDSVSRDA-----RDFILKCLQVNPNDRPTAAQLME 109
              +   P IP+              + +C   N   R TA ++ +
Sbjct: 284 VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 329

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 41.2 bits (97), Expect = 2e-05
 Identities = 21/96 (21%), Positives = 34/96 (35%), Gaps = 13/96 (13%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRC-RPYFGVEWA--LFKIARGE 74
           +W    +  + +  SK        D WS G  + E+ +    PY        L  +  G 
Sbjct: 251 KWMPPEAFMEGIFTSK-------TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 303

Query: 75  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 110
               P +        + +C Q  P DRP  A ++E 
Sbjct: 304 RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILER 339

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 41.1 bits (97), Expect = 2e-05
 Identities = 24/120 (20%), Positives = 39/120 (32%), Gaps = 21/120 (17%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWA--LFKIARGE 74
           +W    +  + +  SK        D WS G  + E+ +    PY        L  +  G 
Sbjct: 210 KWMPPEAFMEGIFTSK-------TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 262

Query: 75  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH--------PFVKRPLPTSWGLPTP 126
               P +        + +C Q  P DRP  A ++E           +   LP  +G    
Sbjct: 263 RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALPIEYGPLVE 322

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 41.1 bits (97), Expect = 3e-05
 Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 3/71 (4%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGVEWA--LFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           D+WS G  + E  +   +PY G++ +     + +GE    P    R+  D +  C   + 
Sbjct: 202 DVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDV 261

Query: 99  NDRPTAAQLME 109
            +RP  A +  
Sbjct: 262 ENRPGFAAVEL 272

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 40.9 bits (96), Expect = 3e-05
 Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 13/96 (13%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWA--LFKIARGE 74
           +W    SL  Q   +K       +D+WS G  + E++TR   PY  V        + +G 
Sbjct: 261 KWMALESLQTQKFTTK-------SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 313

Query: 75  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 110
               P+       + +LKC       RP+ ++L+  
Sbjct: 314 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 349

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 40.7 bits (96), Expect = 3e-05
 Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 10/90 (11%)

Query: 24  SLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWA--LFKIARGELPPIPD 80
           SL      +K       +D+WS G  + E+LTR   PY  ++       +A+G   P P+
Sbjct: 199 SLQTYRFTTK-------SDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPE 251

Query: 81  SVSRDARDFILKCLQVNPNDRPTAAQLMEH 110
                    + +C + +P  RPT   L+  
Sbjct: 252 YCPDSLYQVMQQCWEADPAVRPTFRVLVGE 281

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 3/71 (4%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGV--EWALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           D+W     + E+L+   +P+F +  +  +  + +G+  P PD         + +C   +P
Sbjct: 196 DVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDP 255

Query: 99  NDRPTAAQLME 109
           +DRP   +L+ 
Sbjct: 256 SDRPRFTELVC 266

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 41.1 bits (97), Expect = 3e-05
 Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 3/71 (4%)

Query: 42  DIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           D+WS G  + E  +    PY  +  +     + +G   P P+         + +C    P
Sbjct: 297 DVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEP 356

Query: 99  NDRPTAAQLME 109
             RP+ + + +
Sbjct: 357 GQRPSFSTIYQ 367

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 40.8 bits (96), Expect = 4e-05
 Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 13/96 (13%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWA--LFKIARGE 74
           +W    +L D+V   +       +D+WS G  + E+ T    PY G+        +  G 
Sbjct: 270 KWMAPEALFDRVYTHQ-------SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH 322

Query: 75  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 110
               P + + +    +  C    P+ RPT  QL+E 
Sbjct: 323 RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 358

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 40.9 bits (96), Expect = 4e-05
 Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 42  DIWSVGCTVLEMLTRCR-PYFGVEWA--LFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           D+W+ G  + E+ T    PY G++ +     + +      P+       + +  C Q NP
Sbjct: 401 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 460

Query: 99  NDRPTAAQLMEH 110
           +DRP+ A++ + 
Sbjct: 461 SDRPSFAEIHQA 472

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 40.7 bits (95), Expect = 4e-05
 Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGVEWA--LFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           D+WS G T+ E L+   +PY  ++    +  I +G+    P     +    +  C     
Sbjct: 521 DVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKW 580

Query: 99  NDRPTAAQLME 109
            DRP    + +
Sbjct: 581 EDRPDFLTVEQ 591

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 40.3 bits (95), Expect = 6e-05
 Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 3/71 (4%)

Query: 42  DIWSVGCTVLEMLTRCR-PYFGVEWA--LFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           D+WS G  + E+ T  + P+F +     +  I +G +   P    ++  D +L C Q  P
Sbjct: 217 DVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDVMLGCWQREP 276

Query: 99  NDRPTAAQLME 109
             R    ++ +
Sbjct: 277 QQRLNIKEIYK 287

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 39.9 bits (94), Expect = 6e-05
 Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 14/97 (14%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEW---ALFKIARG 73
           +W    ++ D+V   +       +D+WS G  + E+ +    PY GV+       ++  G
Sbjct: 215 KWMAPETIFDRVYTIQ-------SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 267

Query: 74  ELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 110
                PD  + +    +L C    P+ RPT ++L+EH
Sbjct: 268 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 40.0 bits (94), Expect = 6e-05
 Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 13/96 (13%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWA--LFKIARGE 74
           +W    +L D++   +       +D+WS G  + E+ T    PY GV        +  G 
Sbjct: 258 KWMAPEALFDRIYTHQ-------SDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 310

Query: 75  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 110
               P + + +    +  C    P+ RPT  QL+E 
Sbjct: 311 RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 346

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 39.9 bits (94), Expect = 7e-05
 Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGVEWA--LFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           D+W+ G  + E+ T    PY G++ +     + +      P+       + +  C Q NP
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 253

Query: 99  NDRPTAAQLMEH 110
           +DRP+ A++ + 
Sbjct: 254 SDRPSFAEIHQA 265

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 40.0 bits (94), Expect = 7e-05
 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 3/71 (4%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGV--EWALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           D+WS G  + E++T   RPY+ +     +  I  G   P P          +++C Q   
Sbjct: 232 DVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQER 291

Query: 99  NDRPTAAQLME 109
             RP  A ++ 
Sbjct: 292 ARRPKFADIVS 302

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 40.0 bits (94), Expect = 7e-05
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 3/71 (4%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGVEWA--LFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           D+WS G  + E+++   RPY+ +     +  +  G   P P          +L C Q + 
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDR 291

Query: 99  NDRPTAAQLME 109
           N+RP   Q++ 
Sbjct: 292 NNRPKFEQIVS 302

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 39.6 bits (93), Expect = 1e-04
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 3/71 (4%)

Query: 42  DIWSVGCTVLEMLTRCR-PYFGVEWA--LFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           D+WS G  + E+ +  R PY  +     + ++ +G     PD       D +  C  ++ 
Sbjct: 368 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDA 427

Query: 99  NDRPTAAQLME 109
             RPT  QL E
Sbjct: 428 ATRPTFLQLRE 438

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 39.5 bits (92), Expect = 1e-04
 Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 11/91 (12%)

Query: 24  SLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWA---LFKIARGELPPIP 79
           ++ D+V   +       +D+WS G  + E+ +    PY GV+       ++  G     P
Sbjct: 266 TIFDRVYTIQ-------SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 318

Query: 80  DSVSRDARDFILKCLQVNPNDRPTAAQLMEH 110
           D  + +    +L C    P+ RPT ++L+EH
Sbjct: 319 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 13/96 (13%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWA--LFKIARGE 74
           +W    SL D +  ++       +D+WS G  + E++T    PY G+        +  G 
Sbjct: 217 KWMAIESLFDHIYTTQ-------SDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGH 269

Query: 75  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 110
               PD+ S +    +L+C +  P+ RP  A + + 
Sbjct: 270 RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD 305

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 3/72 (4%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGVEWA--LFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           D+WS G  + E+ +    PY  +     + ++ +G     PD       + +  C  ++ 
Sbjct: 196 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDA 255

Query: 99  NDRPTAAQLMEH 110
             RP+  QL E 
Sbjct: 256 AMRPSFLQLREQ 267

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 39.3 bits (92), Expect = 1e-04
 Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 3/71 (4%)

Query: 42  DIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           D+WS G  ++E++T  R PY G+     +  + RG   P P++   +  + +++C +  P
Sbjct: 367 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRP 426

Query: 99  NDRPTAAQLME 109
            +RPT   +  
Sbjct: 427 EERPTFEYIQS 437

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 39.1 bits (91), Expect = 2e-04
 Identities = 15/112 (13%), Positives = 29/112 (25%), Gaps = 27/112 (24%)

Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCR-------------PYFGVEWALFKIA 71
           L   V            D++++G    E+  RC               +           
Sbjct: 200 LEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFE 259

Query: 72  --------RGELPPIPDSVSRDA------RDFILKCLQVNPNDRPTAAQLME 109
                     + P  P++   ++      ++ I  C   +   R TA    E
Sbjct: 260 DMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEE 311

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 38.9 bits (91), Expect = 2e-04
 Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 17/85 (20%)

Query: 42  DIWSVGCTVLEMLTRCR-PYFGVEWALF----------------KIARGELPPIPDSVSR 84
           D+WS G  + E+ T C          L                  +  G+  P P +   
Sbjct: 212 DVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPA 271

Query: 85  DARDFILKCLQVNPNDRPTAAQLME 109
           +  + +  C   +P DRP+ + L  
Sbjct: 272 EVHELMKLCWAPSPQDRPSFSALGP 296

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGVEWA--LFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           D+WS G  + E+L    RPY+ +     +  +  G   P P          +L C   + 
Sbjct: 236 DVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDR 295

Query: 99  NDRPTAAQLME 109
             RP  +Q++ 
Sbjct: 296 AQRPRFSQIVS 306

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 17/86 (19%)

Query: 42  DIWSVGCTVLEMLTRCR---------------PYFGVEWA--LFKIARGELPPIPDSVSR 84
           D+WS G T+ E+LT C                 +  +     +  +  G+  P P +   
Sbjct: 211 DVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPD 270

Query: 85  DARDFILKCLQVNPNDRPTAAQLMEH 110
           +    + KC +  P++R +   L+E 
Sbjct: 271 EVYQLMRKCWEFQPSNRTSFQNLIEG 296

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 38.4 bits (90), Expect = 2e-04
 Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 14/97 (14%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCR-PYFGV---EWALFKIARG 73
           +W    S+ + V   +       +D+WS G  + E+ +    PY G+         I  G
Sbjct: 212 KWMAPESIFNCVYTFE-------SDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 264

Query: 74  ELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 110
                P+    +  D +  C   +P  RPT  Q+++ 
Sbjct: 265 FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL 301

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 3/71 (4%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGV--EWALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           D+W+ G  + E+ +    PY        + K+++G     P   S      +  C    P
Sbjct: 187 DVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCWHELP 246

Query: 99  NDRPTAAQLME 109
             RPT  QL+ 
Sbjct: 247 EKRPTFQQLLS 257

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 38.4 bits (90), Expect = 3e-04
 Identities = 15/87 (17%), Positives = 25/87 (28%), Gaps = 18/87 (20%)

Query: 42  DIWSVGCTVLEMLTRCR----------------PYFGVEWA--LFKIARGELPPIPDSVS 83
           D+WS G  + E+ T                       +     +  +      P PD   
Sbjct: 199 DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCP 258

Query: 84  RDARDFILKCLQVNPNDRPTAAQLMEH 110
            +    + +C   N N RP+   L   
Sbjct: 259 DEIYMIMTECWNNNVNQRPSFRDLALR 285

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 38.0 bits (89), Expect = 3e-04
 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 4/72 (5%)

Query: 42  DIWSVGCTVLEMLTRCR-PYFGVEWA--LFKIAR-GELPPIPDSVSRDARDFILKCLQVN 97
           D W  G T+ EM T  + P+ G+  +  L KI + GE  P P+   +D  + +++C    
Sbjct: 206 DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHK 265

Query: 98  PNDRPTAAQLME 109
           P DRPT   L +
Sbjct: 266 PEDRPTFVALRD 277

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 38.0 bits (89), Expect = 3e-04
 Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 3/72 (4%)

Query: 42  DIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           DIWS G  + E+ +    PY G   +  +  I   ++ P PD         +++C    P
Sbjct: 212 DIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFP 271

Query: 99  NDRPTAAQLMEH 110
           + RP    +   
Sbjct: 272 SRRPRFKDIHSR 283

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 38.1 bits (89), Expect = 3e-04
 Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 17/85 (20%)

Query: 42  DIWSVGCTVLEMLTRCR---------------PYFGVEWA--LFKIARGELPPIPDSVSR 84
           D+WS G T+ E+LT C                    +        + RGE  P PD    
Sbjct: 219 DVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPA 278

Query: 85  DARDFILKCLQVNPNDRPTAAQLME 109
           +    +  C +   + RPT   L+ 
Sbjct: 279 EVYHLMKNCWETEASFRPTFENLIP 303

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 37.7 bits (88), Expect = 4e-04
 Identities = 15/86 (17%), Positives = 25/86 (29%), Gaps = 18/86 (20%)

Query: 42  DIWSVGCTVLEMLTRCR----------------PYFGVEWA--LFKIARGELPPIPDSVS 83
           D+WS G  + E+ T                       +     +  +      P PD   
Sbjct: 230 DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCP 289

Query: 84  RDARDFILKCLQVNPNDRPTAAQLME 109
            +    + +C   N N RP+   L  
Sbjct: 290 DEIYMIMTECWNNNVNQRPSFRDLAL 315

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 37.3 bits (87), Expect = 6e-04
 Identities = 19/97 (19%), Positives = 33/97 (34%), Gaps = 14/97 (14%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGV---EWALFKIARG 73
           +W    SL + +   K       +D+WS G  + E+ +    PY G+         I  G
Sbjct: 239 KWMAPESLFEGIYTIK-------SDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNG 291

Query: 74  ELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 110
                P   + +    +  C   +   RP+   L   
Sbjct: 292 FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 328

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 36.8 bits (86), Expect = 7e-04
 Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 3/71 (4%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGV--EWALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
           D+WS G  + E+ +    PY        +  I+ G     P   S      +  C +  P
Sbjct: 187 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERP 246

Query: 99  NDRPTAAQLME 109
            DRP  ++L+ 
Sbjct: 247 EDRPAFSRLLR 257

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	133
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.93
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.92
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.92
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.92
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.92
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.91
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.91
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.89
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.89
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.89
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.87
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.87
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.87
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.87
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.87
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.86
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.86
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.85
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.83
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.83
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.82
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.82
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.82
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.82
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.81
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.81
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.81
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.81
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.81
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.81
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.81
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.8
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.8
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.8
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.8
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.8
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.8
3niz_A	311	Rhodanese family protein; structural genomics, str	99.8
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.8
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.8
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.8
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.8
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.8
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.8
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.8
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.79
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.79
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.79
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.79
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.79
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.79
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.79
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.79
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.79
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.79
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.79
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.79
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.79
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.79
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.79
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.79
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.79
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.79
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.79
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.78
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.78
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.78
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.78
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.78
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.78
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.78
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.78
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.78
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.78
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.78
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.78
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.78
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.78
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.78
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.78
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.77
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.77
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.77
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.77
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.77
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.77
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.77
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.77
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.77
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.77
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.77
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.77
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.77
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.77
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.77
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.77
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.77
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.77
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.76
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.76
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.76
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.76
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.76
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.76
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.76
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.76
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.76
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.76
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.76
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.76
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.76
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.76
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.76
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.76
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.76
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.76
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.76
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.75
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.75
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.75
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.75
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.75
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.75
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.75
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.75
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.75
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.75
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.75
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.74
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.74
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.74
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.74
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.74
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.74
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.74
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.74
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.74
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.74
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.74
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.73
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.73
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.73
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.73
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.73
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.73
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.73
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.73
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.73
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.73
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.72
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.72
3bhy_A	283	Death-associated protein kinase 3; death associate	99.72
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.72
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.71
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.71
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.71
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.71
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.7
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.7
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.7
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.7
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.7
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.7
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.69
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.69
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.68
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.68
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.68
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.68
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.67
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.67
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.67
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.67
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.67
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.67
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.67
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.67
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.67
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.67
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.67
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.67
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.67
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.67
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.66
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.66
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.66
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.66
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.66
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.66
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.66
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.66
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.66
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.66
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.66
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.66
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.66
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.65
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.65
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.65
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.65
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.64
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.64
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.64
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.64
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.64
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.64
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.64
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.64
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.64
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.64
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.63
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.63
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.63
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.62
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.62
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.62
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.62
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.62
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.61
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.61
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.61
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.6
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.6
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.6
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.6
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.59
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.59
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.59
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.59
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.59
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.59
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.58
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.58
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.57
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.56
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.56
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.55
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.55
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.54
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.54
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.52
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.52
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.49
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.48
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.47
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.44
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.33
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.25
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.23
3uqc_A	286	Probable conserved transmembrane protein; structur	99.12
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	95.91
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	94.03
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	93.44

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.93  E-value=1.3e-25  Score=153.79  Aligned_cols=101  Identities=32%  Similarity=0.492  Sum_probs=84.9

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCC--CCCCCHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDARDFIL   91 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~   91 (133)
                      ++.+||+.|+|||++..  ..|+.++||||+||++|+|++|..||.+.+  ..+..+.....+..  +..++.++.+|+.
T Consensus       228 ~~~~GTp~YmAPEvl~~--~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~  305 (346)
T 4fih_A          228 KSLVGTPYWMAPELISR--LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD  305 (346)
T ss_dssp             CCCCSCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHH
T ss_pred             cccccCcCcCCHHHHCC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHH
Confidence            45799999999999987  459999999999999999999999998764  44455555543332  3468899999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      +||..||.+|++++|+++||||.+..+
T Consensus       306 ~~L~~dP~~R~ta~e~l~Hp~~~~~~~  332 (346)
T 4fih_A          306 RLLVRDPAQRATAAELLKHPFLAKAGP  332 (346)
T ss_dssp             HHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             HHcCCChhHCcCHHHHhcCHhhcCCCC
Confidence            999999999999999999999987654

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.92  E-value=8.4e-26  Score=154.99  Aligned_cols=99  Identities=24%  Similarity=0.491  Sum_probs=87.7

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ++.+||+.|+|||++.+  ..|+.++||||+||++|+|++|..||.+.+  ..+..+..+..++.+..++.++.+++.+|
T Consensus       183 ~~~~GT~~YmAPE~l~~--~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~s~~~~~li~~~  260 (350)
T 4b9d_A          183 RACIGTPYYLSPEICEN--KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQL  260 (350)
T ss_dssp             HHHHSCCTTCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHH
T ss_pred             cccCCCccccCHHHHCC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHH
Confidence            45699999999999987  459999999999999999999999998764  45566667777777888999999999999


Q ss_pred             cccCCCCCCCHHHHhhCCCCCCC
Q 032788           94 LQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      |..||.+|++++|+++|||+.+.
T Consensus       261 L~~dP~~R~s~~e~l~hp~~~~~  283 (350)
T 4b9d_A          261 FKRNPRDRPSVNSILEKGFIAKR  283 (350)
T ss_dssp             TCSSGGGSCCHHHHHTSHHHHTT
T ss_pred             ccCChhHCcCHHHHhcCHHhhcC
Confidence            99999999999999999999754

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.92  E-value=1.2e-25  Score=150.04  Aligned_cols=101  Identities=28%  Similarity=0.375  Sum_probs=79.2

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ++.+||+.|+|||++.+.. .++.++|+||+||++|+|++|..||.+.+  .....+..+. ...+..++.++.+++.+|
T Consensus       169 ~~~~GT~~Y~APE~~~~~~-y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~~  246 (275)
T 3hyh_A          169 KTSCGSPNYAAPEVISGKL-YAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV-YTLPKFLSPGAAGLIKRM  246 (275)
T ss_dssp             ------CTTSCHHHHSSSS-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC-CCCCTTSCHHHHHHHHHH
T ss_pred             CCeeECcccCChhhhcCCC-CCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHH
Confidence            4579999999999998732 23679999999999999999999998754  3334444443 456778999999999999


Q ss_pred             cccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           94 LQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      |..||.+|+|++|+++||||+...+
T Consensus       247 L~~dP~~R~s~~eil~hpw~k~~~p  271 (275)
T 3hyh_A          247 LIVNPLNRISIHEIMQDDWFKVDLP  271 (275)
T ss_dssp             SCSSGGGSCCHHHHHHCHHHHTTCC
T ss_pred             ccCChhHCcCHHHHHcCcccccCCC
Confidence            9999999999999999999986554

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.92  E-value=2.1e-25  Score=149.83  Aligned_cols=97  Identities=20%  Similarity=0.381  Sum_probs=78.7

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HH-HHHHHhCCCC-CCCCCCCHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WA-LFKIARGELP-PIPDSVSRDARDFIL   91 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~-~~~~~~~~~~-~~~~~~~~~~~~~~~   91 (133)
                      ++.+||+.|||||++.+   .|+.++||||+||++|+|++|..||.+..  .. ...+..+..+ ..+...+.++.+++.
T Consensus       188 ~~~~GTp~YmAPE~~~~---~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~  264 (290)
T 3fpq_A          188 KAVIGTPEFMAPEMYEE---KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIE  264 (290)
T ss_dssp             EESCSSCCCCCGGGGGT---CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHH
T ss_pred             CCcccCccccCHHHcCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHH
Confidence            45699999999999864   38999999999999999999999997543  22 3333333322 234567789999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      +||..||.+|||++|+++||||++
T Consensus       265 ~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          265 GCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HHccCChhHCcCHHHHhcCccccC
Confidence            999999999999999999999975

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.92  E-value=7.6e-25  Score=153.38  Aligned_cols=101  Identities=32%  Similarity=0.473  Sum_probs=85.1

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC--CCCCCCHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP--IPDSVSRDARDFIL   91 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~   91 (133)
                      ++.+||+.|||||++..  ..|+.++||||+||++|+|++|..||.+..  ..+..+.....+.  .+..++.++.+|+.
T Consensus       305 ~~~~GTp~YmAPEvl~~--~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~  382 (423)
T 4fie_A          305 KSLVGTPYWMAPELISR--LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD  382 (423)
T ss_dssp             CCCEECTTTCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHH
T ss_pred             cccccCcCcCCHHHHCC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHH
Confidence            45799999999999987  459999999999999999999999998754  4445555554332  34578999999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      +||..||.+|++++|+++||||.+..+
T Consensus       383 ~~L~~dP~~R~ta~ell~Hp~~~~~~~  409 (423)
T 4fie_A          383 RLLVRDPAQRATAAELLKHPFLAKAGP  409 (423)
T ss_dssp             HHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             HHcCCChhHCcCHHHHhcCHHhcCCCC
Confidence            999999999999999999999987543

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.91  E-value=7.8e-25  Score=147.82  Aligned_cols=98  Identities=24%  Similarity=0.387  Sum_probs=83.7

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      .+.+||+.|+|||++.+  ..|+.++|+||+||++|+|++|..||.+.+  ..+..+.+.. ...|..++.++.+++.+|
T Consensus       184 ~~~~GT~~YmAPE~~~~--~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~~  260 (304)
T 3ubd_A          184 YSFCGTVEYMAPEVVNR--RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK-LGMPQFLSPEAQSLLRML  260 (304)
T ss_dssp             CSCCCCGGGCCHHHHHT--SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHH
T ss_pred             cccccCcccCCHHHhcc--CCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCC-CCCCCcCCHHHHHHHHHH
Confidence            45799999999999987  459999999999999999999999998765  3344444443 456778999999999999


Q ss_pred             cccCCCCCCC-----HHHHhhCCCCCCC
Q 032788           94 LQVNPNDRPT-----AAQLMEHPFVKRP  116 (133)
Q Consensus        94 l~~~p~~R~s-----~~~~l~~~~~~~~  116 (133)
                      |..||.+|++     ++|+++||||+..
T Consensus       261 L~~dP~~R~ta~~~~~~eil~Hp~f~~i  288 (304)
T 3ubd_A          261 FKRNPANRLGAGPDGVEEIKRHSFFSTI  288 (304)
T ss_dssp             TCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred             cccCHHHCCCCCcCCHHHHHcCccccCC
Confidence            9999999998     5899999999863

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.91  E-value=5.4e-25  Score=148.86  Aligned_cols=101  Identities=20%  Similarity=0.362  Sum_probs=84.8

Q ss_pred             hhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      .+++|||+.|+|||++.+  ..|+.++|+||+||++|+|++|..||.+.+  ..+..+.... ...|..++.++.+++.+
T Consensus       191 ~~~~~GTp~YmAPEvl~~--~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~-~~~p~~~s~~~~dli~~  267 (311)
T 4aw0_A          191 ANSFVGTAQYVSPELLTE--KSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLE-YDFPEKFFPKARDLVEK  267 (311)
T ss_dssp             BCCCCSCGGGCCHHHHHH--SCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC-CCCCTTCCHHHHHHHHH
T ss_pred             ccCcccCcccCCHHHHcC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-CCCCcccCHHHHHHHHH
Confidence            346799999999999988  459999999999999999999999998754  3344454443 35677899999999999


Q ss_pred             HcccCCCCCCCHHH------HhhCCCCCCCCC
Q 032788           93 CLQVNPNDRPTAAQ------LMEHPFVKRPLP  118 (133)
Q Consensus        93 ~l~~~p~~R~s~~~------~l~~~~~~~~~~  118 (133)
                      ||..||.+|++++|      +++||||++--.
T Consensus       268 lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw  299 (311)
T 4aw0_A          268 LLVLDATKRLGCEEMEGYGPLKAHPFFESVTW  299 (311)
T ss_dssp             HSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCC
T ss_pred             HccCCHhHCcChHHHcCCHHHHCCCCcCCCCH
Confidence            99999999999987      588999987543

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.89  E-value=1.8e-23  Score=142.84  Aligned_cols=99  Identities=25%  Similarity=0.358  Sum_probs=81.2

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC--CCCCCCCCHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL--PPIPDSVSRDARDFIL   91 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~   91 (133)
                      +.++||+.|||||++.+  ..|+.++||||+||++|+|++|..||.+..  .....+.....  ...+..++..+.+++.
T Consensus       214 ~~~~GT~~YmAPE~~~~--~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~  291 (336)
T 4g3f_A          214 DYIPGTETHMAPEVVMG--KPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQ  291 (336)
T ss_dssp             CCCCCCGGGCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHH
T ss_pred             CccccCccccCHHHHCC--CCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHHHHHH
Confidence            34689999999999988  459999999999999999999999997654  23334444332  2356788999999999


Q ss_pred             HHcccCCCCCCCHHHH-------------hhCCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQL-------------MEHPFVKRP  116 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~-------------l~~~~~~~~  116 (133)
                      +||..||.+|+|+.|+             ++|||+.+.
T Consensus       292 ~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~  329 (336)
T 4g3f_A          292 EGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEY  329 (336)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSC
T ss_pred             HHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCC
Confidence            9999999999999997             568898764

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.89  E-value=3.6e-23  Score=142.80  Aligned_cols=99  Identities=26%  Similarity=0.336  Sum_probs=74.8

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHh--------------------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIAR--------------------   72 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~--------------------   72 (133)
                      ++.+||+.|+|||++.+. ..|+.++|+||+||++|+|++|..||....   ..+..+..                    
T Consensus       204 ~~~~GT~~Y~APE~l~~~-~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~  282 (361)
T 4f9c_A          204 APRAGTPGFRAPEVLTKC-PNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILC  282 (361)
T ss_dssp             --CCCCGGGCCHHHHTTC-SCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEE
T ss_pred             cccccCccccCHHHHcCC-CCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccc
Confidence            456899999999999763 348999999999999999999999995432   12211110                    


Q ss_pred             -----------------CC----------------CCCCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           73 -----------------GE----------------LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        73 -----------------~~----------------~~~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                                       ..                .......++.++.+|+.+||..||.+|+|++|+++||||+.
T Consensus       283 ~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~  358 (361)
T 4f9c_A          283 SKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKD  358 (361)
T ss_dssp             SSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred             cccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence                             00                00112356788999999999999999999999999999975

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.89  E-value=5.4e-23  Score=143.49  Aligned_cols=101  Identities=27%  Similarity=0.330  Sum_probs=78.9

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC------------------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL------------------   75 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~------------------   75 (133)
                      .+.+||+.|+|||++.+. ..|+.++||||+||++|+|++|..||.+.+  ..+..+.....                  
T Consensus       220 ~~~~GT~~Y~APEv~~~~-~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~  298 (398)
T 4b99_A          220 TEYVATRWYRAPELMLSL-HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAY  298 (398)
T ss_dssp             CSSCCCCTTCCHHHHTTC-SCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHH
T ss_pred             ccceeChHhcCHHHhcCC-CCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhh
Confidence            456999999999998763 347999999999999999999999998754  33333322111                  


Q ss_pred             -----CCC-------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           76 -----PPI-------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        76 -----~~~-------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                           ...       ...++.++.+|+.+||..||.+|+|++|+++||||++..
T Consensus       299 ~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  352 (398)
T 4b99_A          299 IQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYH  352 (398)
T ss_dssp             HHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTC
T ss_pred             hhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCC
Confidence                 000       124578899999999999999999999999999998753

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.87  E-value=1.8e-22  Score=136.73  Aligned_cols=92  Identities=20%  Similarity=0.402  Sum_probs=80.7

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ..+||+.|+|||++..  ..|+.++||||+||++||+++ |..||.+..  .....+..+...+.|..++..+.+++..|
T Consensus       206 ~~~gt~~ymAPE~l~~--~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~C  283 (308)
T 4gt4_A          206 NSLLPIRWMAPEAIMY--GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIEC  283 (308)
T ss_dssp             SSCBCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             ccccCCcccCHHHHhC--CCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCcccchHHHHHHHHHH
Confidence            4589999999999988  459999999999999999998 889998754  45566667777778889999999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032788           94 LQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~  110 (133)
                      |..||.+||++.|++++
T Consensus       284 ~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          284 WNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             cCCChhHCcCHHHHHHH
Confidence            99999999999999764

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.87  E-value=4.5e-23  Score=139.16  Aligned_cols=96  Identities=19%  Similarity=0.296  Sum_probs=72.9

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHH---HHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA---LFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ++.+||+.|||||++.+  ..|+.++||||+||++|+|++   ||.+....   +..+.....++......+...+++.+
T Consensus       188 ~~~~GT~~YmAPE~~~~--~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~  262 (299)
T 4g31_A          188 TGQVGTKLYMSPEQIHG--NSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQD  262 (299)
T ss_dssp             ----CCCTTSCHHHHTT--CCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHH
T ss_pred             CCcccCccccCHHHHcC--CCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHHhcCCCCCCCcccCHHHHHHHHH
Confidence            45689999999999987  459999999999999999995   67665422   33333333333233445677889999


Q ss_pred             HcccCCCCCCCHHHHhhCCCCCCC
Q 032788           93 CLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      ||..||.+||+++|+++|+||+..
T Consensus       263 ~L~~dP~~Rps~~eil~h~~~~~~  286 (299)
T 4g31_A          263 MLSPSPMERPEAINIIENAVFEDL  286 (299)
T ss_dssp             HTCSSGGGSCCHHHHHTSGGGCCC
T ss_pred             HcCCChhHCcCHHHHhcCHhhCCC
Confidence            999999999999999999999863

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.87  E-value=3.6e-22  Score=136.32  Aligned_cols=93  Identities=16%  Similarity=0.310  Sum_probs=80.5

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      +..+||+.|||||++..  ..|+.++||||+||++||+++ |+.||.+..  +.+..+..+.....|..++.++.+++.+
T Consensus       218 ~~~~gt~~ymAPE~~~~--~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~  295 (329)
T 4aoj_A          218 GRTMLPIRWMPPESILY--RKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRG  295 (329)
T ss_dssp             --CCCCGGGCCHHHHTT--CCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHH
T ss_pred             CcccccccccChhhhcC--CCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCcccccHHHHHHHHH
Confidence            34689999999999988  459999999999999999998 899998754  4556667777778888999999999999


Q ss_pred             HcccCCCCCCCHHHHhhC
Q 032788           93 CLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~  110 (133)
                      ||..||.+||+++|++++
T Consensus       296 cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          296 CWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             HCCSSTTTSCCHHHHHHH
T ss_pred             HcCcChhHCcCHHHHHHH
Confidence            999999999999998764

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.87  E-value=4.6e-22  Score=144.32  Aligned_cols=101  Identities=27%  Similarity=0.377  Sum_probs=83.3

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCC---CCCCCCCHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELP---PIPDSVSRDARDFI   90 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~   90 (133)
                      ...+||+.|+|||++.+  ..|+.++|+||+||++|+|++|..||.+..  ..+..+......   ..+..++..+.+|+
T Consensus       314 ~~~~GT~~y~APEv~~~--~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli  391 (573)
T 3uto_A          314 KVTTGTAEFAAPEVAEG--KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFI  391 (573)
T ss_dssp             EEECSSGGGCCHHHHTT--CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHH
T ss_pred             eeeEECccccCHHHhCC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHH
Confidence            34699999999999998  459999999999999999999999998765  334444443321   22356889999999


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      .+||..||.+|++++|+++||||+....
T Consensus       392 ~~~L~~dp~~R~t~~e~l~Hpw~~~~~~  419 (573)
T 3uto_A          392 RKLLLADPNTRMTIHQALEHPWLTPGNA  419 (573)
T ss_dssp             HTTSCSSGGGSCCHHHHHHSTTTSCCCC
T ss_pred             HHHccCChhHCcCHHHHhcCcCcCCCCC
Confidence            9999999999999999999999986543

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.87  E-value=4.8e-22  Score=145.51  Aligned_cols=100  Identities=23%  Similarity=0.367  Sum_probs=82.9

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH----HHHHHHHhCCCCCCCCCCCHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELPPIPDSVSRDARDFIL   91 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (133)
                      .+.|||+.|+|||++..+ ..|+.++|+||+||++|+|++|..||.+..    ..+...........|..++.++.+++.
T Consensus       348 ~t~~GTp~YmAPEvl~~~-~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~S~~a~dLI~  426 (689)
T 3v5w_A          348 HASVGTHGYMAPEVLQKG-VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE  426 (689)
T ss_dssp             CSCCSCGGGCCHHHHSTT-CCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHH
T ss_pred             CCccCCcCccCHHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCccCCHHHHHHHH
Confidence            457999999999999642 358999999999999999999999997643    223333333445678889999999999


Q ss_pred             HHcccCCCCCCC-----HHHHhhCCCCCCC
Q 032788           92 KCLQVNPNDRPT-----AAQLMEHPFVKRP  116 (133)
Q Consensus        92 ~~l~~~p~~R~s-----~~~~l~~~~~~~~  116 (133)
                      +||..||.+|++     ++|+++||||+..
T Consensus       427 ~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~i  456 (689)
T 3v5w_A          427 GLLQRDVNRRLGCLGRGAQEVKESPFFRSL  456 (689)
T ss_dssp             HHTCSCGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred             HHccCCHhHCCCCCCCCHHHHhcCccccCC
Confidence            999999999997     7999999999863

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.86  E-value=5.1e-22  Score=133.98  Aligned_cols=90  Identities=17%  Similarity=0.379  Sum_probs=79.3

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      .+||+.|||||++..  ..|+.++||||+||++||+++ |+.||.+..  +....+..+..+..|..++.++.+++.+||
T Consensus       190 ~~gt~~ymAPE~~~~--~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl  267 (299)
T 4asz_A          190 TMLPIRWMPPESIMY--RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCW  267 (299)
T ss_dssp             EEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             eecChhhcCHHHHcC--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHc
Confidence            479999999999998  459999999999999999998 899998754  455667777777788899999999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032788           95 QVNPNDRPTAAQLME  109 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~  109 (133)
                      ..||.+||+++++..
T Consensus       268 ~~dP~~RPs~~~i~~  282 (299)
T 4asz_A          268 QREPHMRKNIKGIHT  282 (299)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             CCChhHCcCHHHHHH
Confidence            999999999999853

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.86  E-value=3.9e-22  Score=137.21  Aligned_cols=92  Identities=24%  Similarity=0.436  Sum_probs=80.7

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH---HHHHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE---WALFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ..+||+.|||||++..  ..|+.++||||+||++||+++ |..||.+.+   .....+..+..+..|..++.++.+++..
T Consensus       246 ~~~gt~~ymAPE~l~~--~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~  323 (353)
T 4ase_A          246 DARLPLKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD  323 (353)
T ss_dssp             TEEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHH
T ss_pred             cccccccccCHHHHhc--CCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHH
Confidence            4589999999999998  459999999999999999997 899997653   3445566777778888899999999999


Q ss_pred             HcccCCCCCCCHHHHhhC
Q 032788           93 CLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~  110 (133)
                      ||..||.+|||+.++++|
T Consensus       324 c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          324 CWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             HTCSSGGGSCCHHHHHHH
T ss_pred             HcCcChhHCcCHHHHHHH
Confidence            999999999999999886

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.85  E-value=4.3e-21  Score=129.80  Aligned_cols=95  Identities=17%  Similarity=0.377  Sum_probs=73.3

Q ss_pred             hccccccccccccccccC-CCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHH-HHHHhCCC----CCCCCCCCHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WAL-FKIARGEL----PPIPDSVSRDAR   87 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~-~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~-~~~~~~~~----~~~~~~~~~~~~   87 (133)
                      +..+||+.|||||++... ...|+.++||||+||++|||++|..||.+.+  ..+ ..+..+..    ...+..++..+.
T Consensus       192 ~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~  271 (307)
T 3omv_A          192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMK  271 (307)
T ss_dssp             --CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHH
T ss_pred             cccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHH
Confidence            456999999999999742 2458999999999999999999999997643  222 33333322    223556889999


Q ss_pred             HHHHHHcccCCCCCCCHHHHhhC
Q 032788           88 DFILKCLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        88 ~~~~~~l~~~p~~R~s~~~~l~~  110 (133)
                      +++.+||..||.+|||+.|++++
T Consensus       272 ~li~~cl~~dP~~RPs~~ei~~~  294 (307)
T 3omv_A          272 RLVADCVKKVKEERPLFPQILSS  294 (307)
T ss_dssp             HHHHHHTCSSSTTSCCHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHH
Confidence            99999999999999999987543

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.83  E-value=3.4e-20  Score=126.51  Aligned_cols=99  Identities=22%  Similarity=0.375  Sum_probs=82.3

Q ss_pred             hhccccccccccccccccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHH
Q 032788           15 RKWHVSRWNSLTDQVVNSKNGGY-GLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFIL   91 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~-~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (133)
                      .+..+||+.|+|||.+.+.  .+ +.++|+||+|+++|++++|..||.+.+  .....+..+. ...|...+..+.+++.
T Consensus       170 ~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~  246 (328)
T 3fe3_A          170 LDAFCGAPPYAAPELFQGK--KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK-YRIPFYMSTDCENLLK  246 (328)
T ss_dssp             GGTTSSSGGGCCHHHHHTC--CCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-CCCCTTSCHHHHHHHH
T ss_pred             cccccCCcceeCcccccCC--CcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-CCCCCCCCHHHHHHHH
Confidence            3456999999999999873  34 579999999999999999999998765  3333444443 3567778999999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      +||..||.+||+++|+++|||+...
T Consensus       247 ~~L~~dP~~R~t~~eil~h~~~~~~  271 (328)
T 3fe3_A          247 RFLVLNPIKRGTLEQIMKDRWINAG  271 (328)
T ss_dssp             HHCCSSTTTSCCHHHHTTCTTTTTT
T ss_pred             HHCCCChhHCcCHHHHhcCHhhcCC
Confidence            9999999999999999999999764

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.83  E-value=3.7e-20  Score=126.78  Aligned_cols=97  Identities=24%  Similarity=0.418  Sum_probs=81.7

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...+||+.|+|||++..  ..++.++|+||+|+++|+|++|..||.+.+  .....+... ....+..++..+.+++.+|
T Consensus       163 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~l  239 (337)
T 1o6l_A          163 KTFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME-EIRFPRTLSPEAKSLLAGL  239 (337)
T ss_dssp             CCCEECGGGCCGGGGSS--SCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-CCCCCTTSCHHHHHHHHHH
T ss_pred             cccccChhhCChhhhcC--CCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHH
Confidence            45689999999999987  458999999999999999999999997654  223333333 3456778899999999999


Q ss_pred             cccCCCCCC-----CHHHHhhCCCCCC
Q 032788           94 LQVNPNDRP-----TAAQLMEHPFVKR  115 (133)
Q Consensus        94 l~~~p~~R~-----s~~~~l~~~~~~~  115 (133)
                      |..||.+|+     +++++++|+||..
T Consensus       240 L~~dP~~R~g~~~~~~~ei~~h~~f~~  266 (337)
T 1o6l_A          240 LKKDPKQRLGGGPSDAKEVMEHRFFLS  266 (337)
T ss_dssp             TCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred             hhcCHHHhcCCCCCCHHHHHcCCCcCC
Confidence            999999999     8999999999975

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.82  E-value=2.1e-20  Score=129.86  Aligned_cols=101  Identities=26%  Similarity=0.280  Sum_probs=77.2

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCC-----------------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELP-----------------   76 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~-----------------   76 (133)
                      +..+||+.|+|||++.+. ..++.++|+||+||++|++++|..||.+..  ..+..+......                 
T Consensus       188 ~~~~gt~~y~aPE~~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~  266 (388)
T 3oz6_A          188 TDYVATRWYRAPEILLGS-TKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTM  266 (388)
T ss_dssp             --CCCGGGGCCHHHHTTC-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHH
T ss_pred             cCCcccCCcCCHHHhcCC-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHH
Confidence            456999999999999763 458999999999999999999999997654  222222111000                 


Q ss_pred             -----------------------------CCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           77 -----------------------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        77 -----------------------------~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                                                   ..+...+..+.+++.+||..||.+|+|++|+++||||....
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~  336 (388)
T 3oz6_A          267 IESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFH  336 (388)
T ss_dssp             HHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTC
T ss_pred             HHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhc
Confidence                                         01125678899999999999999999999999999997643

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.82  E-value=9.8e-20  Score=125.70  Aligned_cols=98  Identities=27%  Similarity=0.376  Sum_probs=80.5

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC---CCCCCCHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP---IPDSVSRDARDFI   90 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~   90 (133)
                      ...+||+.|+|||++..  ..++.++|+||+|+++|++++|..||.+..  ..+..+.......   .+...+..+.+++
T Consensus       176 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li  253 (361)
T 2yab_A          176 KNIFGTPEFVAPEIVNY--EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFI  253 (361)
T ss_dssp             CCCCSCGGGCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHH
T ss_pred             ccCCCCccEECchHHcC--CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCCHHHHHHH
Confidence            45689999999999987  458999999999999999999999997754  3334444333211   1246788999999


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      .+||..||.+||+++|+++||||..
T Consensus       254 ~~~L~~dP~~R~t~~e~l~hp~~~~  278 (361)
T 2yab_A          254 RKLLVKETRKRLTIQEALRHPWITP  278 (361)
T ss_dssp             HHHSCSSTTTSCCHHHHHTSTTTSC
T ss_pred             HHHCCCChhHCcCHHHHhcCcCcCC
Confidence            9999999999999999999999974

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.82  E-value=4.7e-20  Score=124.03  Aligned_cols=101  Identities=32%  Similarity=0.527  Sum_probs=81.7

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCC--CCCCCCCCCHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGE--LPPIPDSVSRDARDFIL   91 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~   91 (133)
                      ...+||+.|+|||.+..  ..++.++|+||+|+++|++++|..||.+..  .....+....  ....+..++..+.+++.
T Consensus       174 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  251 (297)
T 3fxz_A          174 STMVGTPYWMAPEVVTR--KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN  251 (297)
T ss_dssp             CCCCSCGGGCCHHHHHC--SCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHH
T ss_pred             CCccCCcCccChhhhcC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHH
Confidence            34589999999999987  458999999999999999999999997654  2222222222  22335678899999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      +||..||.+||+++++++|+||+...+
T Consensus       252 ~~l~~dp~~Rps~~ell~h~~~~~~~~  278 (297)
T 3fxz_A          252 RCLEMDVEKRGSAKELLQHQFLKIAKP  278 (297)
T ss_dssp             HHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             HHccCChhHCcCHHHHhhChhhcccCc
Confidence            999999999999999999999986544

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.81  E-value=7.5e-20  Score=129.17  Aligned_cols=98  Identities=22%  Similarity=0.404  Sum_probs=82.6

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...+||+.|+|||++..  ..++.++|+||+|+++|++++|..||.+..  .....+.. .....+..++..+.+++.+|
T Consensus       307 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~-~~~~~p~~~~~~~~~li~~~  383 (446)
T 4ejn_A          307 KTFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM-EEIRFPRTLGPEAKSLLSGL  383 (446)
T ss_dssp             CCSSSCGGGCCHHHHHT--SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-CCCCCCTTSCHHHHHHHHHH
T ss_pred             ccccCCccccCHhhcCC--CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHh-CCCCCCccCCHHHHHHHHHH
Confidence            45699999999999987  458999999999999999999999997654  22333333 33456778899999999999


Q ss_pred             cccCCCCCC-----CHHHHhhCCCCCCC
Q 032788           94 LQVNPNDRP-----TAAQLMEHPFVKRP  116 (133)
Q Consensus        94 l~~~p~~R~-----s~~~~l~~~~~~~~  116 (133)
                      |..||.+|+     +++++++||||...
T Consensus       384 L~~dP~~R~~~~~~t~~ell~hp~f~~~  411 (446)
T 4ejn_A          384 LKKDPKQRLGGGSEDAKEIMQHRFFAGI  411 (446)
T ss_dssp             TCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             cccCHHHhCCCCCCCHHHHHhCccccCC
Confidence            999999999     99999999999864

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.81  E-value=1.7e-19  Score=125.90  Aligned_cols=100  Identities=25%  Similarity=0.435  Sum_probs=81.7

Q ss_pred             hhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCh----------HHHHHHHHhCCCCCCCCCCCH
Q 032788           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV----------EWALFKIARGELPPIPDSVSR   84 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~----------~~~~~~~~~~~~~~~~~~~~~   84 (133)
                      ..+.+||+.|+|||++.+  ..++.++|+||+|+++|+|++|..||...          ...+...........|..++.
T Consensus       210 ~~~~~gt~~Y~aPE~l~~--~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s~  287 (396)
T 4dc2_A          210 TSTFCGTPNYIAPEILRG--EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSV  287 (396)
T ss_dssp             BCCCCBCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTTSCH
T ss_pred             cccccCCcccCCchhhcC--CCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCcCCH
Confidence            345699999999999987  45899999999999999999999999532          122333333344466778999


Q ss_pred             HHHHHHHHHcccCCCCCCCH------HHHhhCCCCCCC
Q 032788           85 DARDFILKCLQVNPNDRPTA------AQLMEHPFVKRP  116 (133)
Q Consensus        85 ~~~~~~~~~l~~~p~~R~s~------~~~l~~~~~~~~  116 (133)
                      .+.+++.+||..||.+|+++      +++++||||+..
T Consensus       288 ~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i  325 (396)
T 4dc2_A          288 KAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  325 (396)
T ss_dssp             HHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred             HHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCC
Confidence            99999999999999999984      799999999853

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.81  E-value=2.4e-20  Score=128.38  Aligned_cols=98  Identities=21%  Similarity=0.340  Sum_probs=79.7

Q ss_pred             hhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ..+.+||+.|+|||++..  ..++.++|+||+|+++|+|++|..||.+.+  .....+.... ...+..++..+.+++.+
T Consensus       181 ~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~li~~  257 (353)
T 3txo_A          181 TATFCGTPDYIAPEILQE--MLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE-VVYPTWLHEDATGILKS  257 (353)
T ss_dssp             -----CCGGGCCHHHHHH--HHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-CCCCTTSCHHHHHHHHH
T ss_pred             ccccCCCcCeEChhhcCC--CCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHH
Confidence            345699999999999987  348999999999999999999999997754  3344444433 35677789999999999


Q ss_pred             HcccCCCCCCCH------HHHhhCCCCCC
Q 032788           93 CLQVNPNDRPTA------AQLMEHPFVKR  115 (133)
Q Consensus        93 ~l~~~p~~R~s~------~~~l~~~~~~~  115 (133)
                      ||..||.+|+++      +++++||||+.
T Consensus       258 lL~~dP~~R~~~~~~~~~~~il~hp~f~~  286 (353)
T 3txo_A          258 FMTKNPTMRLGSLTQGGEHAILRHPFFKE  286 (353)
T ss_dssp             HTCSSGGGSTTSGGGTCTHHHHTSGGGTT
T ss_pred             HhhhCHHHccCCcccCCHHHHhhCCcccC
Confidence            999999999998      89999999985

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.81  E-value=6.5e-20  Score=124.01  Aligned_cols=97  Identities=25%  Similarity=0.430  Sum_probs=76.2

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHHHHHHHhCCC-CCCCCCCCHHHHHHHHHHc
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGEL-PPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l   94 (133)
                      ....||+.|+|||++.+   .++.++|+||+|+++|++++|..++.+... ...+..+.. ...+..++..+.+++.+||
T Consensus       214 ~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~el~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~L  289 (311)
T 3p1a_A          214 EVQEGDPRYMAPELLQG---SYGTAADVFSLGLTILEVACNMELPHGGEG-WQQLRQGYLPPEFTAGLSSELRSVLVMML  289 (311)
T ss_dssp             -CCCCCGGGCCGGGGGT---CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH-HHHHTTTCCCHHHHTTSCHHHHHHHHHHS
T ss_pred             cccCCCccccCHhHhcC---CCCchhhHHHHHHHHHHHHhCCCCCCCccH-HHHHhccCCCcccccCCCHHHHHHHHHHc
Confidence            34579999999999875   389999999999999999999776655432 222222221 1234567899999999999


Q ss_pred             ccCCCCCCCHHHHhhCCCCCCC
Q 032788           95 QVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      ..||.+||+++++++||||+++
T Consensus       290 ~~dP~~Rpt~~ell~hp~~~~p  311 (311)
T 3p1a_A          290 EPDPKLRATAEALLALPVLRQP  311 (311)
T ss_dssp             CSSTTTSCCHHHHHTSGGGSCC
T ss_pred             CCChhhCcCHHHHHhCccccCC
Confidence            9999999999999999999863

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.81  E-value=3.4e-20  Score=127.28  Aligned_cols=98  Identities=20%  Similarity=0.395  Sum_probs=82.6

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...+||+.|+|||++.+  ..++.++|+||+|+++|++++|..||.+.+  .....+... ....+..++..+.+++.+|
T Consensus       176 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~l  252 (345)
T 1xjd_A          176 NTFCGTPDYIAPEILLG--QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD-NPFYPRWLEKEAKDLLVKL  252 (345)
T ss_dssp             CCCCSCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-CCCCCTTSCHHHHHHHHHH
T ss_pred             cCCCCCcccCChhhhcC--CCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhC-CCCCCcccCHHHHHHHHHH
Confidence            45699999999999987  458999999999999999999999997654  333344333 3456777899999999999


Q ss_pred             cccCCCCCCCHH-HHhhCCCCCCC
Q 032788           94 LQVNPNDRPTAA-QLMEHPFVKRP  116 (133)
Q Consensus        94 l~~~p~~R~s~~-~~l~~~~~~~~  116 (133)
                      |..||.+|+++. ++++||||+..
T Consensus       253 L~~dp~~R~~~~~~i~~hp~f~~~  276 (345)
T 1xjd_A          253 FVREPEKRLGVRGDIRQHPLFREI  276 (345)
T ss_dssp             SCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred             hcCCHhHcCCChHHHHcCccccCC
Confidence            999999999998 99999999763

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.81  E-value=1.8e-19  Score=127.36  Aligned_cols=97  Identities=29%  Similarity=0.542  Sum_probs=80.3

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCC---CCCCCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELP---PIPDSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~   91 (133)
                      ..+||+.|+|||++..  ..++.++|+||+|+++|++++|..||.+..  .....+..+...   +....++..+.+++.
T Consensus       172 ~~~gt~~Y~APE~l~~--~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  249 (444)
T 3soa_A          172 GFAGTPGYLSPEVLRK--DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN  249 (444)
T ss_dssp             CSCSCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHH
T ss_pred             cccCCcccCCHHHhcC--CCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHHHH
Confidence            4589999999999987  458999999999999999999999997654  334444444332   223467899999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      +||..||.+||+++|+++|||+..
T Consensus       250 ~~L~~dP~~Rpta~e~L~hp~~~~  273 (444)
T 3soa_A          250 KMLTINPSKRITAAEALKHPWISH  273 (444)
T ss_dssp             HHSCSSTTTSCCHHHHHHSCTTHH
T ss_pred             HHcCCChhHCCCHHHHhcCccccC
Confidence            999999999999999999999964

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.81  E-value=9.8e-20  Score=122.77  Aligned_cols=99  Identities=25%  Similarity=0.392  Sum_probs=75.7

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC--CCCC--------------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG--ELPP--------------   77 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~--~~~~--------------   77 (133)
                      ...+||+.|+|||++..  ..++.++|+||+|+++|++++|..||.+..  .....+...  ....              
T Consensus       177 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  254 (308)
T 3g33_A          177 TPVVVTLWYRAPEVLLQ--STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAF  254 (308)
T ss_dssp             GGGGCCCSSCCHHHHHT--SCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGS
T ss_pred             CCccccccccCchHHcC--CCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhcccccc
Confidence            44689999999999987  458999999999999999999999997654  222222211  1000              


Q ss_pred             ----------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           78 ----------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        78 ----------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                                ....++..+.+++.+||..||.+|++++|+++||||.+.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~  303 (308)
T 3g33_A          255 PPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD  303 (308)
T ss_dssp             CCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC---
T ss_pred             CCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCC
Confidence                      012467889999999999999999999999999999864

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.80  E-value=6e-20  Score=129.25  Aligned_cols=101  Identities=27%  Similarity=0.438  Sum_probs=74.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC--CCC----------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG--ELP----------------   76 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~--~~~----------------   76 (133)
                      ..+||+.|+|||++.+  ..++.++||||+||++|++++|..||.+..  ..+..+...  ..+                
T Consensus       258 ~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~  335 (429)
T 3kvw_A          258 TYIQSRFYRAPEVILG--ARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSS  335 (429)
T ss_dssp             SSCSCGGGCCHHHHHT--BCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCT
T ss_pred             ccCCCCCccChHHHhC--CCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCC
Confidence            4589999999999987  448999999999999999999999997654  222222110  000                


Q ss_pred             ----C------------------------------------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           77 ----P------------------------------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        77 ----~------------------------------------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                          .                                    .+...+..+.+|+.+||..||.+|+|++|+++||||++.
T Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~  415 (429)
T 3kvw_A          336 KGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRR  415 (429)
T ss_dssp             TSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC--
T ss_pred             CCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccC
Confidence                0                                    011236778999999999999999999999999999876


Q ss_pred             CCC
Q 032788          117 LPT  119 (133)
Q Consensus       117 ~~~  119 (133)
                      .+.
T Consensus       416 ~~~  418 (429)
T 3kvw_A          416 LPK  418 (429)
T ss_dssp             ---
T ss_pred             CCC
Confidence            543

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.80  E-value=1.2e-19  Score=124.99  Aligned_cols=98  Identities=21%  Similarity=0.346  Sum_probs=82.1

Q ss_pred             hhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ....+||+.|+|||++..  ..++.++|+||+|+++|+|++|..||.+.+  .....+... ....+..++..+.+++.+
T Consensus       178 ~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~  254 (353)
T 2i0e_A          178 TKTFCGTPDYIAPEIIAY--QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH-NVAYPKSMSKEAVAICKG  254 (353)
T ss_dssp             BCCCCSCGGGCCHHHHTT--CCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-CCCCCTTSCHHHHHHHHH
T ss_pred             cccccCCccccChhhhcC--CCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhC-CCCCCCCCCHHHHHHHHH
Confidence            345699999999999987  458999999999999999999999998754  333444443 345677899999999999


Q ss_pred             HcccCCCCCCC-----HHHHhhCCCCCC
Q 032788           93 CLQVNPNDRPT-----AAQLMEHPFVKR  115 (133)
Q Consensus        93 ~l~~~p~~R~s-----~~~~l~~~~~~~  115 (133)
                      ||..||.+|++     ++++++||||+.
T Consensus       255 lL~~dP~~R~~~~~~~~~~i~~h~~f~~  282 (353)
T 2i0e_A          255 LMTKHPGKRLGCGPEGERDIKEHAFFRY  282 (353)
T ss_dssp             HTCSCTTSCTTCSTTHHHHHHTSGGGTT
T ss_pred             HhhcCHHHcCCCCCCCHHHHhcCccccC
Confidence            99999999994     699999999975

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.80  E-value=1.1e-19  Score=123.62  Aligned_cols=104  Identities=24%  Similarity=0.358  Sum_probs=81.4

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC---CCCCCCCCHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL---PPIPDSVSRDARDFI   90 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~   90 (133)
                      ...+||+.|+|||.+..  ..++.++|+||+|+++|++++|..||.+..  .....+.....   ......++..+.+++
T Consensus       191 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  268 (327)
T 3lm5_A          191 REIMGTPEYLAPEILNY--DPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFI  268 (327)
T ss_dssp             ---CCCGGGCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHH
T ss_pred             ccccCCcCccCCeeecC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHHHHHHH
Confidence            34589999999999987  458999999999999999999999997654  22333332222   223356789999999


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCCCCCCCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFVKRPLPTSW  121 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~~~~~~~~~  121 (133)
                      ..||..||.+||+++++++|+||+.......
T Consensus       269 ~~~L~~dP~~Rpt~~~ll~h~~~~~~~~~~~  299 (327)
T 3lm5_A          269 QSLLVKNPEKRPTAEICLSHSWLQQWDFENL  299 (327)
T ss_dssp             HHHSCSSGGGSCCHHHHTTCGGGCCCCTTCC
T ss_pred             HHHcCCChhhCcCHHHHhCCHhhcccccccc
Confidence            9999999999999999999999987654443

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.80  E-value=1.3e-19  Score=123.13  Aligned_cols=97  Identities=22%  Similarity=0.381  Sum_probs=81.9

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      .+.+||+.|+|||++..  ..++.++|+||+|+++|++++|..||.+.+  .....+.... ...+...+..+.+++.+|
T Consensus       161 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~li~~l  237 (318)
T 1fot_A          161 YTLCGTPDYIAPEVVST--KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE-LRFPPFFNEDVKDLLSRL  237 (318)
T ss_dssp             CCCCSCTTTCCHHHHTT--CCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHH
T ss_pred             ccccCCccccCHhHhcC--CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-CCCCCCCCHHHHHHHHHH
Confidence            34689999999999987  458999999999999999999999997654  3334444433 356677899999999999


Q ss_pred             cccCCCCCC-----CHHHHhhCCCCCC
Q 032788           94 LQVNPNDRP-----TAAQLMEHPFVKR  115 (133)
Q Consensus        94 l~~~p~~R~-----s~~~~l~~~~~~~  115 (133)
                      +..||.+|+     +++++++||||+.
T Consensus       238 L~~dp~~R~~~~~~~~~~i~~hp~f~~  264 (318)
T 1fot_A          238 ITRDLSQRLGNLQNGTEDVKNHPWFKE  264 (318)
T ss_dssp             TCSCTTTCTTSSTTTTHHHHTSGGGSS
T ss_pred             hccCHHHcCCCcCCCHHHHhcCccccC
Confidence            999999999     8999999999985

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.80  E-value=1.6e-19  Score=123.35  Aligned_cols=105  Identities=23%  Similarity=0.316  Sum_probs=81.0

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC-C--CCCCCHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP-I--PDSVSRDARDFI   90 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~-~--~~~~~~~~~~~~   90 (133)
                      ....||+.|+|||.+......++.++|+||+|+++|++++|..||.+..  .....+....... .  ...++..+.+++
T Consensus       232 ~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  311 (345)
T 3hko_A          232 TTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLL  311 (345)
T ss_dssp             ---CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHH
T ss_pred             cccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHH
Confidence            4568999999999997533458899999999999999999999997654  3333333333211 1  124788999999


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCCCCCCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFVKRPLPTS  120 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~~~~~~~~  120 (133)
                      .+||..||.+||++.++++||||+......
T Consensus       312 ~~~l~~~p~~Rps~~~~l~hp~~~~~~~~~  341 (345)
T 3hko_A          312 SNLLNRNVDERFDAMRALQHPWISQFSDKI  341 (345)
T ss_dssp             HHHSCSCTTTSCCHHHHHHSHHHHTTSSCS
T ss_pred             HHHcCCChhHCCCHHHHhcChhhccChHhh
Confidence            999999999999999999999998765443

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.80  E-value=1.8e-19  Score=121.94  Aligned_cols=101  Identities=30%  Similarity=0.419  Sum_probs=76.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh---CCCCC--------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR---GELPP--------------   77 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~---~~~~~--------------   77 (133)
                      ..+||+.|+|||++.+. ..++.++|+||+|+++|++++|..||.+..  ..+..+..   ...+.              
T Consensus       178 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  256 (311)
T 3niz_A          178 HEVVTLWYRAPDVLMGS-KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQR  256 (311)
T ss_dssp             CCCCCCTTCCHHHHTTC-CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSC
T ss_pred             CCcccCCcCCHHHhcCC-CCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhc
Confidence            45889999999998753 347999999999999999999999997643  22222211   11100              


Q ss_pred             ------------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           78 ------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        78 ------------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                                  .....+.++.+++.+||..||.+|||++|+++||||+...+
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  309 (311)
T 3niz_A          257 TFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLDP  309 (311)
T ss_dssp             CCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSCT
T ss_pred             ccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCCc
Confidence                        01235678899999999999999999999999999987544

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.80  E-value=1.9e-19  Score=122.47  Aligned_cols=102  Identities=16%  Similarity=0.203  Sum_probs=79.7

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhC-CCCCCCCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARG-ELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   92 (133)
                      ..+||+.|+|||.+... ..++.++|+||+|+++|++++|..||....   ......... ........++..+.+++.+
T Consensus       166 ~~~gt~~y~aPE~~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  244 (323)
T 3tki_A          166 KMCGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK  244 (323)
T ss_dssp             SCCSCGGGSCHHHHHCS-SBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHH
T ss_pred             CCccCcCccCcHHhccC-CCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHH
Confidence            56899999999999863 223778999999999999999999997643   222222222 2222235678999999999


Q ss_pred             HcccCCCCCCCHHHHhhCCCCCCCCCC
Q 032788           93 CLQVNPNDRPTAAQLMEHPFVKRPLPT  119 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~~~~~~~~  119 (133)
                      ||..||.+|++++|+++|+||.+....
T Consensus       245 ~L~~dP~~R~t~~eil~h~~~~~~~~~  271 (323)
T 3tki_A          245 ILVENPSARITIPDIKKDRWYNKPLKK  271 (323)
T ss_dssp             HSCSSTTTSCCHHHHTTCTTTTCCCCC
T ss_pred             HccCChhhCcCHHHHhhChhhcccccc
Confidence            999999999999999999999875543

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.80  E-value=1.6e-19  Score=122.75  Aligned_cols=109  Identities=26%  Similarity=0.336  Sum_probs=78.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh--C-CCCC--------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR--G-ELPP--------------   77 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~--~-~~~~--------------   77 (133)
                      ..+||+.|+|||.+.+. ..++.++|+||+|+++|++++|..||.+..  ..+..+..  + ....              
T Consensus       159 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  237 (324)
T 3mtl_A          159 NEVVTLWYRPPDILLGS-TDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTY  237 (324)
T ss_dssp             ----CGGGCCHHHHTTC-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHT
T ss_pred             cccCcccccChhhhcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccc
Confidence            45789999999998763 347999999999999999999999997754  22222211  1 1000              


Q ss_pred             ------------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCCCCCCCCcc
Q 032788           78 ------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTP  126 (133)
Q Consensus        78 ------------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~~~~~~~~~  126 (133)
                                  ....++..+.+++.+||..||.+||+++|+++||||.........+|.+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~~~~~~  298 (324)
T 3mtl_A          238 NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHKLPDT  298 (324)
T ss_dssp             CCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCSTTSSSCTT
T ss_pred             ccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccccccCCCC
Confidence                        0123577889999999999999999999999999998765554444433

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.80  E-value=1.4e-19  Score=126.31  Aligned_cols=101  Identities=22%  Similarity=0.249  Sum_probs=72.7

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----------HHHHHHHhCCCCCC------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----------WALFKIARGELPPI------   78 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----------~~~~~~~~~~~~~~------   78 (133)
                      ...+||+.|+|||++.+. ..++.++||||+||++|+|++|..||.+..           ..+..+......+.      
T Consensus       193 ~~~~gt~~y~aPE~~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~  271 (405)
T 3rgf_A          193 DPVVVTFWYRAPELLLGA-RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWED  271 (405)
T ss_dssp             ----CCCTTCCHHHHTTC-CSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGG
T ss_pred             CCceecCcccCchhhcCC-CcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcch
Confidence            456899999999999863 348999999999999999999999996432           12222211100000      


Q ss_pred             -------------------------------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           79 -------------------------------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        79 -------------------------------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                                                     ....+..+.+++.+||..||.+|+|++|+++||||....
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~  341 (405)
T 3rgf_A          272 IKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP  341 (405)
T ss_dssp             GGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSS
T ss_pred             hhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCC
Confidence                                           011256788999999999999999999999999998653

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.80  E-value=1.3e-19  Score=124.50  Aligned_cols=97  Identities=26%  Similarity=0.540  Sum_probs=80.1

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHH-HHHHHhCCCCCC---CCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA-LFKIARGELPPI---PDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~   92 (133)
                      ..+||+.|+|||++..  ..++.++|+||+|+++|++++|..||.+.... ...+..+.....   +..++..+.+++.+
T Consensus       192 ~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  269 (351)
T 3c0i_A          192 GRVGTPHFMAPEVVKR--EPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRR  269 (351)
T ss_dssp             CCCSCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHH
T ss_pred             CCcCCcCccCHHHHcC--CCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCCCCCccccccCCHHHHHHHHH
Confidence            4589999999999987  45899999999999999999999999876533 334444433222   24678999999999


Q ss_pred             HcccCCCCCCCHHHHhhCCCCCC
Q 032788           93 CLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      ||..||.+|++++++++||||..
T Consensus       270 ~L~~dP~~R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          270 MLMLDPAERITVYEALNHPWLKE  292 (351)
T ss_dssp             HTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             HCCCChhHCcCHHHHhcChhhcC
Confidence            99999999999999999999975

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.80  E-value=3.7e-20  Score=131.47  Aligned_cols=99  Identities=27%  Similarity=0.377  Sum_probs=73.4

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCC-----------------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELP-----------------   76 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~-----------------   76 (133)
                      +..+||+.|+|||++.+  ..|+.++|+||+|+++|+|++|..||.+.+  ..+..+......                 
T Consensus       221 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~  298 (464)
T 3ttj_A          221 TPYVVTRYYRAPEVILG--MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV  298 (464)
T ss_dssp             ----CCCTTCCHHHHTT--CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHH
T ss_pred             CCCcccccccCHHHHcC--CCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHh
Confidence            44689999999999988  458999999999999999999999998754  222222211100                 


Q ss_pred             ----CC---------CCC-----------CCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           77 ----PI---------PDS-----------VSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        77 ----~~---------~~~-----------~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                          ..         +..           .+..+.+++.+||..||.+|+|++|+++||||..+
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~  362 (464)
T 3ttj_A          299 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW  362 (464)
T ss_dssp             TTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred             hcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhc
Confidence                00         000           03568899999999999999999999999999864

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.80  E-value=2.2e-19  Score=123.23  Aligned_cols=99  Identities=25%  Similarity=0.440  Sum_probs=80.2

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCh----------HHHHHHHHhCCCCCCCCCCCHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV----------EWALFKIARGELPPIPDSVSRD   85 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~----------~~~~~~~~~~~~~~~~~~~~~~   85 (133)
                      ...+||+.|+|||++..  ..++.++|+||+|+++|+|++|..||...          ...............+...+..
T Consensus       168 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~  245 (345)
T 3a8x_A          168 STFCGTPNYIAPEILRG--EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVK  245 (345)
T ss_dssp             CCCCSCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTTSCHH
T ss_pred             cccCCCccccCccccCC--CCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCCCCHH
Confidence            45699999999999987  45899999999999999999999999641          1222222223334567788999


Q ss_pred             HHHHHHHHcccCCCCCCCH------HHHhhCCCCCCC
Q 032788           86 ARDFILKCLQVNPNDRPTA------AQLMEHPFVKRP  116 (133)
Q Consensus        86 ~~~~~~~~l~~~p~~R~s~------~~~l~~~~~~~~  116 (133)
                      +.+++.+||..||.+|+++      +++++||||+..
T Consensus       246 ~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~  282 (345)
T 3a8x_A          246 AASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  282 (345)
T ss_dssp             HHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCC
Confidence            9999999999999999985      899999999753

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.80  E-value=2.9e-19  Score=127.25  Aligned_cols=102  Identities=25%  Similarity=0.338  Sum_probs=83.3

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      .+.+||+.|+|||++.+. ...+.++|+||+|+++|++++|..||.+..  .....+..+. ...+..++..+.+++.+|
T Consensus       173 ~~~~gt~~y~aPE~~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~Li~~~  250 (476)
T 2y94_A          173 RTSCGSPNYAAPEVISGR-LYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI-FYTPQYLNPSVISLLKHM  250 (476)
T ss_dssp             CCCCSCSTTCCHHHHTTC-CBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTC-CCCCTTCCHHHHHHHHHH
T ss_pred             cccCCCcCeEChhhccCC-CCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC-cCCCccCCHHHHHHHHHH
Confidence            456899999999999873 123689999999999999999999998754  3334444443 355677889999999999


Q ss_pred             cccCCCCCCCHHHHhhCCCCCCCCCC
Q 032788           94 LQVNPNDRPTAAQLMEHPFVKRPLPT  119 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~~~~~~~~~~  119 (133)
                      |..||.+||+++++++||||....+.
T Consensus       251 L~~dP~~Rpt~~eil~hp~~~~~~~~  276 (476)
T 2y94_A          251 LQVDPMKRATIKDIREHEWFKQDLPK  276 (476)
T ss_dssp             TCSSTTTSCCHHHHHTCHHHHTTCCT
T ss_pred             cCCCchhCcCHHHHHhCHHhhhcCcc
Confidence            99999999999999999999876543

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.79  E-value=2.3e-19  Score=123.33  Aligned_cols=96  Identities=24%  Similarity=0.411  Sum_probs=82.0

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..+||+.|+|||++..  ..++.++|+||+|+++|++++|..||.+..  .....+..+. ...+..++..+.+++.+||
T Consensus       197 ~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~li~~lL  273 (350)
T 1rdq_E          197 TLCGTPEALAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK-VRFPSHFSSDLKDLLRNLL  273 (350)
T ss_dssp             CCEECGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-CCCCTTCCHHHHHHHHHHS
T ss_pred             cccCCccccCHHHhcC--CCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHh
Confidence            4689999999999987  458999999999999999999999997654  3344444443 3567788999999999999


Q ss_pred             ccCCCCCCC-----HHHHhhCCCCCC
Q 032788           95 QVNPNDRPT-----AAQLMEHPFVKR  115 (133)
Q Consensus        95 ~~~p~~R~s-----~~~~l~~~~~~~  115 (133)
                      ..||.+|++     ++++++|+||..
T Consensus       274 ~~dp~~R~~~~~~~~~ei~~h~~f~~  299 (350)
T 1rdq_E          274 QVDLTKRFGNLKNGVNDIKNHKWFAT  299 (350)
T ss_dssp             CSCTTTCTTSSTTTTHHHHTSGGGTT
T ss_pred             hcCHHhccCCccCCHHHHHhCcCcCC
Confidence            999999998     999999999975

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.79  E-value=1.5e-19  Score=122.53  Aligned_cols=105  Identities=26%  Similarity=0.335  Sum_probs=77.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh--CCC-C---------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR--GEL-P---------------   76 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~--~~~-~---------------   76 (133)
                      ..+||+.|+|||++.+. ..++.++|+||+|+++|++++|..||.+..  ..+..+..  +.. .               
T Consensus       167 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  245 (317)
T 2pmi_A          167 SEVVTLWYRAPDVLMGS-RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPN  245 (317)
T ss_dssp             CCCSCCTTCCHHHHTTC-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTT
T ss_pred             CCcccccccCchHhhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccc
Confidence            45889999999999753 347999999999999999999999997654  22222211  100 0               


Q ss_pred             ---------------CCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCCCCCC
Q 032788           77 ---------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWG  122 (133)
Q Consensus        77 ---------------~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~~~~~  122 (133)
                                     ..+...+..+.+++.+||..||.+||+++|+++||||.+.....-.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~~~  306 (317)
T 2pmi_A          246 IQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHHASM  306 (317)
T ss_dssp             CCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC----
T ss_pred             cccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccchhhc
Confidence                           0112467889999999999999999999999999999876554433

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.79  E-value=2.4e-19  Score=132.25  Aligned_cols=98  Identities=21%  Similarity=0.349  Sum_probs=83.6

Q ss_pred             hhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ....+||+.|+|||++..  ..|+.++|+||+|+++|+|++|..||.+.+  .....+. ......+..++.++.+++.+
T Consensus       499 ~~~~~GT~~Y~APE~l~~--~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~-~~~~~~p~~~s~~~~~li~~  575 (674)
T 3pfq_A          499 TKTFCGTPDYIAPEIIAY--QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM-EHNVAYPKSMSKEAVAICKG  575 (674)
T ss_dssp             BCCCCSCSSSCCHHHHTC--CCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-SSCCCCCTTSCHHHHHHHHH
T ss_pred             cccccCCCcccCHhhhcC--CCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHH-hCCCCCCccCCHHHHHHHHH
Confidence            345799999999999987  458999999999999999999999998765  3334444 33446678899999999999


Q ss_pred             HcccCCCCCCCH-----HHHhhCCCCCC
Q 032788           93 CLQVNPNDRPTA-----AQLMEHPFVKR  115 (133)
Q Consensus        93 ~l~~~p~~R~s~-----~~~l~~~~~~~  115 (133)
                      ||..||.+|+++     +++++|+||+.
T Consensus       576 lL~~dP~~R~~~~~~~~~ei~~h~ff~~  603 (674)
T 3pfq_A          576 LMTKHPGKRLGCGPEGERDIKEHAFFRY  603 (674)
T ss_dssp             HSCSSSTTCTTCSTTHHHHHHSSGGGSS
T ss_pred             HccCCHHHCCCCCCCcHHHHhcCccccC
Confidence            999999999987     99999999985

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.79  E-value=3.8e-19  Score=121.06  Aligned_cols=99  Identities=26%  Similarity=0.404  Sum_probs=79.6

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC---CCCCCCHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP---IPDSVSRDARDFI   90 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~   90 (133)
                      ...+||+.|+|||++..  ..++.++|+||+|+++|++++|..||.+..  .....+.......   .+...+..+.+++
T Consensus       175 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  252 (326)
T 2y0a_A          175 KNIFGTPEFVAPEIVNY--EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI  252 (326)
T ss_dssp             CCCCSCTTTCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHH
T ss_pred             ccccCCcCcCCceeecC--CCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCCHHHHHHH
Confidence            34589999999999987  458999999999999999999999997654  3333333332211   1246788999999


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      .+||..||.+||+++++++||||...
T Consensus       253 ~~~L~~dP~~Rpt~~e~l~hp~~~~~  278 (326)
T 2y0a_A          253 RRLLVKDPKKRMTIQDSLQHPWIKPK  278 (326)
T ss_dssp             HHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred             HHHccCChhhCCCHHHHhcCCCccCC
Confidence            99999999999999999999999754

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.79  E-value=1.6e-19  Score=120.47  Aligned_cols=100  Identities=22%  Similarity=0.323  Sum_probs=82.3

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...+|++.|+|||.+..  ..++.++|+||+|+++|++++|..||....  .....+. ......+...+..+.+++..|
T Consensus       170 ~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~  246 (284)
T 2vgo_A          170 RTMCGTLDYLPPEMIEG--KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV-NVDLKFPPFLSDGSKDLISKL  246 (284)
T ss_dssp             CCCCSCGGGCCHHHHTT--CCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH-TTCCCCCTTSCHHHHHHHHHH
T ss_pred             ccccCCCCcCCHHHhcc--CCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHh-ccccCCCCcCCHHHHHHHHHH
Confidence            34589999999999987  448899999999999999999999997654  2223333 333456677899999999999


Q ss_pred             cccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           94 LQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      +..||.+||+++++++||||+....
T Consensus       247 l~~~p~~Rps~~~ll~h~~~~~~~~  271 (284)
T 2vgo_A          247 LRYHPPQRLPLKGVMEHPWVKANSR  271 (284)
T ss_dssp             SCSSGGGSCCHHHHHTCHHHHHHCC
T ss_pred             hhcCHhhCCCHHHHhhCHHHHhhcc
Confidence            9999999999999999999975443

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.79  E-value=2e-19  Score=122.50  Aligned_cols=99  Identities=22%  Similarity=0.357  Sum_probs=73.5

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC--CCCC---------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG--ELPP---------------   77 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~--~~~~---------------   77 (133)
                      ..+||+.|+|||++... ..++.++|+||+|+++|++++|..||.+..  ..+..+...  ....               
T Consensus       196 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (329)
T 3gbz_A          196 HEIITLWYRPPEILLGS-RHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQS  274 (329)
T ss_dssp             ----CCTTCCHHHHTTC-CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred             CCcCCccccCHHHhcCC-CCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhh
Confidence            45789999999999763 347999999999999999999999997654  222222211  1100               


Q ss_pred             C------------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           78 I------------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        78 ~------------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      .            +...+..+.+++.+||..||.+|++++|+++||||+..
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  325 (329)
T 3gbz_A          275 FPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN  325 (329)
T ss_dssp             CCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSS
T ss_pred             hhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCC
Confidence            0            01156889999999999999999999999999999864

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.79  E-value=5.8e-19  Score=121.22  Aligned_cols=102  Identities=25%  Similarity=0.411  Sum_probs=78.7

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--H-HHHHHHhCCCC---CCCCCCCHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--W-ALFKIARGELP---PIPDSVSRDARDF   89 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~-~~~~~~~~~~~---~~~~~~~~~~~~~   89 (133)
                      ...+||+.|+|||.+.+  ..++.++|+||+|+++|++++|..||....  . ....+......   ......+..+.++
T Consensus       208 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  285 (349)
T 2w4o_A          208 KTVCGTPGYCAPEILRG--CAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDL  285 (349)
T ss_dssp             -----CGGGSCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHH
T ss_pred             ccccCCCCccCHHHhcC--CCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHH
Confidence            34689999999999987  458999999999999999999999997654  2 33333333221   2235678999999


Q ss_pred             HHHHcccCCCCCCCHHHHhhCCCCCCCCCC
Q 032788           90 ILKCLQVNPNDRPTAAQLMEHPFVKRPLPT  119 (133)
Q Consensus        90 ~~~~l~~~p~~R~s~~~~l~~~~~~~~~~~  119 (133)
                      +.+||..||.+||+++++++||||......
T Consensus       286 i~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~  315 (349)
T 2w4o_A          286 VRKLIVLDPKKRLTTFQALQHPWVTGKAAN  315 (349)
T ss_dssp             HHTTSCSSGGGSCCHHHHHHSTTTTSTTCC
T ss_pred             HHHHccCChhhCcCHHHHhcCcccCCCccc
Confidence            999999999999999999999999875543

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.79  E-value=5.8e-19  Score=117.06  Aligned_cols=104  Identities=15%  Similarity=0.203  Sum_probs=79.7

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhCCC-CCCCCCCCHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGEL-PPIPDSVSRDARDFIL   91 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~   91 (133)
                      +..+||+.|+|||.+... ..++.++|+||+|+++|++++|..||....   ........... .......+..+.+++.
T Consensus       165 ~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  243 (276)
T 2yex_A          165 NKMCGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH  243 (276)
T ss_dssp             CCCCSCGGGCCGGGGTCS-SBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHH
T ss_pred             cCCccccCccChHHHhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHH
Confidence            345799999999999863 223678999999999999999999997643   22333332221 1223467889999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKRPLPTS  120 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~~~~~~  120 (133)
                      .||..||.+||+++++++|+||++.....
T Consensus       244 ~~l~~~p~~Rps~~~il~~~~~~~~~~~~  272 (276)
T 2yex_A          244 KILVENPSARITIPDIKKDRWYNKPLKKG  272 (276)
T ss_dssp             HHSCSSTTTSCCHHHHTTCTTTTCCCC--
T ss_pred             HHCCCCchhCCCHHHHhcCccccChhhcc
Confidence            99999999999999999999998876544

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.79  E-value=1.5e-19  Score=125.58  Aligned_cols=100  Identities=30%  Similarity=0.484  Sum_probs=73.8

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCC---------------------
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGE---------------------   74 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~---------------------   74 (133)
                      .+||+.|+|||++......++.++|+||+|+++|++++|..||.+..  ........+.                     
T Consensus       195 ~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (389)
T 3gni_B          195 SVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSR  274 (389)
T ss_dssp             CTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-------------------------
T ss_pred             ccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccc
Confidence            48899999999998632358999999999999999999999997532  1111110000                     


Q ss_pred             ------------------------CCCCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           75 ------------------------LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        75 ------------------------~~~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                                              ....+..++..+.+++.+||..||.+||+++|+++||||+...
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~  341 (389)
T 3gni_B          275 SVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK  341 (389)
T ss_dssp             -------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC-
T ss_pred             cccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHh
Confidence                                    0012345678899999999999999999999999999998643

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.79  E-value=3e-19  Score=121.58  Aligned_cols=98  Identities=24%  Similarity=0.443  Sum_probs=81.7

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...+||+.|+|||++..  ..++.++|+||+|+++|++++|..||.+..  .....+.... ...+..++..+.+++.+|
T Consensus       179 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~li~~~  255 (327)
T 3a62_A          179 HTFCGTIEYMAPEILMR--SGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK-LNLPPYLTQEARDLLKKL  255 (327)
T ss_dssp             CTTSSCCTTSCHHHHTT--SCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC-CCCCTTSCHHHHHHHHHH
T ss_pred             cccCCCcCccCHhhCcC--CCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC-CCCCCCCCHHHHHHHHHH
Confidence            34689999999999987  458999999999999999999999997654  3334444333 355677899999999999


Q ss_pred             cccCCCCCC-----CHHHHhhCCCCCCC
Q 032788           94 LQVNPNDRP-----TAAQLMEHPFVKRP  116 (133)
Q Consensus        94 l~~~p~~R~-----s~~~~l~~~~~~~~  116 (133)
                      |..||.+|+     +++++++||||+..
T Consensus       256 L~~dp~~R~~~~~~~~~e~l~hp~f~~~  283 (327)
T 3a62_A          256 LKRNAASRLGAGPGDAGEVQAHPFFRHI  283 (327)
T ss_dssp             SCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred             HhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence            999999998     89999999999753

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.79  E-value=7.7e-20  Score=126.79  Aligned_cols=100  Identities=25%  Similarity=0.361  Sum_probs=74.2

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC----------------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP----------------   77 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~----------------   77 (133)
                      ...+||+.|+|||++.+  ..++.++|+||+|+++|++++|..||.+..  ..+..+.......                
T Consensus       216 ~~~~~t~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  293 (382)
T 2vx3_A          216 YQYIQSRFYRSPEVLLG--MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFE  293 (382)
T ss_dssp             CSSCSCGGGCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEE
T ss_pred             ccccCCccccChHHHcC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHH
Confidence            34689999999999987  458999999999999999999999998654  2222221110000                


Q ss_pred             -CC------------------CC----------------------------CCHHHHHHHHHHcccCCCCCCCHHHHhhC
Q 032788           78 -IP------------------DS----------------------------VSRDARDFILKCLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        78 -~~------------------~~----------------------------~~~~~~~~~~~~l~~~p~~R~s~~~~l~~  110 (133)
                       .+                  ..                            ....+.+++.+||..||.+|||++|+++|
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~h  373 (382)
T 2vx3_A          294 KLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQH  373 (382)
T ss_dssp             ECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             hccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcC
Confidence             00                  00                            00367899999999999999999999999


Q ss_pred             CCCCCCC
Q 032788          111 PFVKRPL  117 (133)
Q Consensus       111 ~~~~~~~  117 (133)
                      |||++..
T Consensus       374 p~f~~~~  380 (382)
T 2vx3_A          374 SFFKKTA  380 (382)
T ss_dssp             GGGCC--
T ss_pred             cccccCC
Confidence            9998753

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.79  E-value=2.5e-19  Score=119.94  Aligned_cols=101  Identities=25%  Similarity=0.365  Sum_probs=74.6

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhC--CC----------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARG--EL----------------   75 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~--~~----------------   75 (133)
                      ..+||+.|+|||.+.+. ..++.++|+||+|+++|++++|..|+....   ..+..+...  ..                
T Consensus       160 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  238 (292)
T 3o0g_A          160 AEVVTLWYRPPDVLFGA-KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP  238 (292)
T ss_dssp             SCCSCGGGCCHHHHTTC-SCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred             CCccccCCcChHHHcCC-CCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccc
Confidence            45889999999999763 347999999999999999998877754322   222222110  00                


Q ss_pred             ----------CCCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           76 ----------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        76 ----------~~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                                .......+..+.+++.+||..||.+|+|++|+++||||++..+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~p  291 (292)
T 3o0g_A          239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCP  291 (292)
T ss_dssp             CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC--
T ss_pred             cccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccCCC
Confidence                      0011246788999999999999999999999999999987543

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.79  E-value=1.6e-20  Score=128.52  Aligned_cols=101  Identities=28%  Similarity=0.390  Sum_probs=79.9

Q ss_pred             hccccccccccccccccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCChH-HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGY-GLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~-~~~~diws~g~~~~~l~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...+||+.|+|||.+.+.  .+ +.++|+||+|+++|++++|..||.+.. ..+...........+..++..+.+++.+|
T Consensus       165 ~~~~gt~~y~aPE~~~~~--~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~  242 (336)
T 3h4j_B          165 KTSCGSPNYAAPEVINGK--LYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRM  242 (336)
T ss_dssp             CCCTTSTTTSCGGGSCCS--GGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCCCTTSCHHHHHHHHTT
T ss_pred             ccccCCcCcCCHHHHcCC--CCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCcccCCHHHHHHHHHH
Confidence            456899999999999873  34 689999999999999999999997643 11111111222345667889999999999


Q ss_pred             cccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           94 LQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      |..||.+||+++|+++||||+...+
T Consensus       243 L~~dP~~Rpt~~eil~hp~~~~~~~  267 (336)
T 3h4j_B          243 IVADPMQRITIQEIRRDPWFNVNLP  267 (336)
T ss_dssp             SCSSGGGSCCHHHHTTCHHHHTTCC
T ss_pred             cCCChhHCcCHHHHHhChhhccCCc
Confidence            9999999999999999999986544

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.79  E-value=4.5e-19  Score=120.44  Aligned_cols=99  Identities=31%  Similarity=0.527  Sum_probs=80.4

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCC--CCCCCHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDARDFIL   91 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~   91 (133)
                      ...+||+.|+|||.+..  ..++.++|+||+|+++|++++|..||....  .....+.....+..  ....+..+.+++.
T Consensus       199 ~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  276 (321)
T 2c30_A          199 KSLVGTPYWMAPEVISR--SLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLE  276 (321)
T ss_dssp             CCCCSCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHH
T ss_pred             ccccCCccccCHhhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHH
Confidence            34589999999999987  458999999999999999999999997654  33334444433222  3357889999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      +||..||.+||+++++++||||...
T Consensus       277 ~~l~~dp~~Rps~~ell~hp~~~~~  301 (321)
T 2c30_A          277 RMLVRDPQERATAQELLDHPFLLQT  301 (321)
T ss_dssp             HHSCSSTTTSCCHHHHHTSGGGGGC
T ss_pred             HHccCChhhCcCHHHHhcChhhccC
Confidence            9999999999999999999999754

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.79  E-value=4.2e-19  Score=118.72  Aligned_cols=98  Identities=30%  Similarity=0.476  Sum_probs=74.0

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh--CCC-C---------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR--GEL-P---------------   76 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~--~~~-~---------------   76 (133)
                      ..+||+.|+|||.+... ..++.++|+||+|+++|++++|..||.+..  ..+..+..  +.. .               
T Consensus       159 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (288)
T 1ob3_A          159 HEIVTLWYRAPDVLMGS-KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN  237 (288)
T ss_dssp             ---CCCTTCCHHHHTTC-CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred             cccccccccCchheeCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccc
Confidence            45889999999998753 347999999999999999999999997654  22222211  000 0               


Q ss_pred             ----------CCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           77 ----------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        77 ----------~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                                .....++..+.+++.+||..||.+||+++|+++||||++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  286 (288)
T 1ob3_A          238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (288)
T ss_dssp             CCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             cccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence                      011346788999999999999999999999999999975

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.79  E-value=2.4e-19  Score=125.83  Aligned_cols=100  Identities=19%  Similarity=0.287  Sum_probs=77.3

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC--------------CC-----
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG--------------EL-----   75 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~--------------~~-----   75 (133)
                      ..+||+.|+|||++.+. ..++.++|+||+||++|+|++|..||.+..  ..+..+...              ..     
T Consensus       215 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~  293 (420)
T 1j1b_A          215 SYICSRYYRAPELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKF  293 (420)
T ss_dssp             SCCSCTTSCCHHHHTTC-SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCC
T ss_pred             eeeeCCCcCCHHHHcCC-CCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhcc
Confidence            45899999999998753 358999999999999999999999997653  222222110              00     


Q ss_pred             CC---------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           76 PP---------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        76 ~~---------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      +.         .+...+..+.+++.+||..||.+|++++|+++|+||....
T Consensus       294 p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~  344 (420)
T 1j1b_A          294 PQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR  344 (420)
T ss_dssp             CCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred             CccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence            00         1234578999999999999999999999999999997643

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.79  E-value=4.9e-19  Score=118.83  Aligned_cols=99  Identities=22%  Similarity=0.352  Sum_probs=77.2

Q ss_pred             ccccccccccccccccCCCC-CCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC-CCCCCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGG-YGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL-PPIPDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~-~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~   92 (133)
                      ..+||+.|+|||.+...... ++.++|+||+|+++|++++|..||....  .....+..... .+....++..+.+++.+
T Consensus       196 ~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  275 (298)
T 2zv2_A          196 NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITR  275 (298)
T ss_dssp             CCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHH
T ss_pred             CCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCCCccccCHHHHHHHHH
Confidence            45899999999999763211 3678999999999999999999997654  22233333322 22234678999999999


Q ss_pred             HcccCCCCCCCHHHHhhCCCCCC
Q 032788           93 CLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      ||..||.+||+++|+++||||.+
T Consensus       276 ~l~~dp~~R~s~~e~l~hp~~~~  298 (298)
T 2zv2_A          276 MLDKNPESRIVVPEIKLHPWVTR  298 (298)
T ss_dssp             HTCSCTTTSCCHHHHTTCHHHHC
T ss_pred             HhhcChhhCCCHHHHhcCccccC
Confidence            99999999999999999999853

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.79  E-value=4.6e-19  Score=123.48  Aligned_cols=103  Identities=23%  Similarity=0.363  Sum_probs=79.0

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC-------------------CC
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG-------------------EL   75 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~-------------------~~   75 (133)
                      ..+||+.|+|||.+.+. ..++.++|+||+|+++|++++|..||.+..  ..+..+...                   ..
T Consensus       200 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~  278 (394)
T 4e7w_A          200 SYICSRYYRAPELIFGA-TNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKF  278 (394)
T ss_dssp             SSCSCGGGCCHHHHTTC-SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCC
T ss_pred             ccccCcCccCHHHHcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhcc
Confidence            45889999999998763 348999999999999999999999998754  222222210                   00


Q ss_pred             CC---------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCCCC
Q 032788           76 PP---------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS  120 (133)
Q Consensus        76 ~~---------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~~~  120 (133)
                      +.         .+...+..+.+++.+||..||.+|+++.++++||||+......
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~  332 (394)
T 4e7w_A          279 PQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGE  332 (394)
T ss_dssp             CCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTSSC
T ss_pred             ccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcccc
Confidence            00         1234678999999999999999999999999999998754433

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.79  E-value=8.1e-19  Score=120.20  Aligned_cols=101  Identities=23%  Similarity=0.270  Sum_probs=77.1

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC--CC-CC-C------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG--EL-PP-I------------   78 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~--~~-~~-~------------   78 (133)
                      ..+||+.|+|||.+.+. ..++.++|+||+|+++|++++|..||.+..  ..+..+...  .. .. .            
T Consensus       171 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  249 (346)
T 1ua2_A          171 HQVVTRWYRAPELLFGA-RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTF  249 (346)
T ss_dssp             CSCCCCTTCCHHHHTTC-SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCC
T ss_pred             cccccccccCchHhhCC-CCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccc
Confidence            35899999999998753 347899999999999999999999987654  222222211  10 00 0            


Q ss_pred             -----------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           79 -----------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        79 -----------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                                 ....+..+.+++.+||..||.+||+++|+++|+||.....
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~~  300 (346)
T 1ua2_A          250 KSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPG  300 (346)
T ss_dssp             CCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSC
T ss_pred             cccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCCC
Confidence                       1345688999999999999999999999999999986543

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.78  E-value=3.2e-19  Score=122.94  Aligned_cols=102  Identities=26%  Similarity=0.369  Sum_probs=77.5

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh--C------------------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR--G------------------   73 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~--~------------------   73 (133)
                      ...+||+.|+|||.+... ..++.++|+||+|+++|++++|..||.+..  ..+..+..  +                  
T Consensus       189 ~~~~gt~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  267 (364)
T 3qyz_A          189 TEYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY  267 (364)
T ss_dssp             CCCCSCGGGCCHHHHHTB-CSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHH
T ss_pred             cccccccCCCCCHHhcCC-CCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHH
Confidence            345899999999987652 347999999999999999999999997643  22222111  0                  


Q ss_pred             ---CCC--C-----CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           74 ---ELP--P-----IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        74 ---~~~--~-----~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                         ...  .     .....+..+.+++.+||..||.+|++++|+++||||+....
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  322 (364)
T 3qyz_A          268 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD  322 (364)
T ss_dssp             HHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred             HHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhccC
Confidence               000  0     01346788999999999999999999999999999987543

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.78  E-value=4.4e-19  Score=119.22  Aligned_cols=101  Identities=22%  Similarity=0.346  Sum_probs=81.5

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ...||+.|+|||.+......++.++|+||+|+++|++++|..||.+..  .....+..+. ...+...+..+.+++.+||
T Consensus       170 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~-~~~~~~~~~~l~~li~~~l  248 (305)
T 2wtk_C          170 TSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGS-YAIPGDCGPPLSDLLKGML  248 (305)
T ss_dssp             CCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCC-CCCCSSSCHHHHHHHHHHT
T ss_pred             cCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCC-CCCCCccCHHHHHHHHHHc
Confidence            457899999999997632224779999999999999999999998754  3333444333 3556778999999999999


Q ss_pred             ccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           95 QVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      ..||.+||+++++++|+||.+..+
T Consensus       249 ~~dp~~Rps~~~ll~~~~~~~~~~  272 (305)
T 2wtk_C          249 EYEPAKRFSIRQIRQHSWFRKKHP  272 (305)
T ss_dssp             CSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred             cCChhhCCCHHHHhcCcccccCCC
Confidence            999999999999999999976543

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.78  E-value=4.5e-19  Score=123.40  Aligned_cols=99  Identities=26%  Similarity=0.420  Sum_probs=80.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC---CCCCCCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL---PPIPDSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~   91 (133)
                      ..+||+.|+|||++..  ..++.++|+||+|+++|++++|..||.+..  ..+..+.....   ......++..+.+++.
T Consensus       209 ~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  286 (387)
T 1kob_A          209 VTTATAEFAAPEIVDR--EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIK  286 (387)
T ss_dssp             EECSSGGGCCHHHHTT--CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHH
T ss_pred             eeccCCCccCchhccC--CCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHH
Confidence            3589999999999987  458999999999999999999999998754  33344433322   2223467899999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      +||..||.+||+++++++|||+....
T Consensus       287 ~~L~~dP~~Rpt~~ell~hp~~~~~~  312 (387)
T 1kob_A          287 NLLQKEPRKRLTVHDALEHPWLKGDH  312 (387)
T ss_dssp             TTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred             HHcCCChhHCcCHHHHhhCccccCCc
Confidence            99999999999999999999998643

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.78  E-value=7.3e-19  Score=120.47  Aligned_cols=102  Identities=25%  Similarity=0.327  Sum_probs=76.4

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh---CCCCCCCCC---------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR---GELPPIPDS---------   81 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~---~~~~~~~~~---------   81 (133)
                      ...+||+.|+|||.+.+. ..++.++|+||+|+++|++++|..||.+..  .....+..   .........         
T Consensus       186 ~~~~gt~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  264 (351)
T 3mi9_A          186 TNRVVTLWYRPPELLLGE-RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEK  264 (351)
T ss_dssp             CSSCSCGGGCCHHHHTTC-CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTS
T ss_pred             CCcccccCccCchhhcCC-CCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcc
Confidence            345889999999998763 347999999999999999999999998754  22222221   111111111         


Q ss_pred             -------------------CCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           82 -------------------VSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        82 -------------------~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                                         .+..+.+++.+||..||.+|++++|+++||||.....
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  320 (351)
T 3mi9_A          265 LELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPM  320 (351)
T ss_dssp             SCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSSC
T ss_pred             cccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCCC
Confidence                               2567889999999999999999999999999976433

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.78  E-value=2.9e-19  Score=123.32  Aligned_cols=97  Identities=26%  Similarity=0.419  Sum_probs=79.5

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC---CCCCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP---IPDSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~   91 (133)
                      ..+||+.|+|||++..  ..++.++|+||+|+++|++++|..||.+.+  .....+..+....   ....++..+.+++.
T Consensus       189 ~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  266 (362)
T 2bdw_A          189 GFAGTPGYLSPEVLKK--DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID  266 (362)
T ss_dssp             CSCSCTTTCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHH
T ss_pred             cCCCCccccCHHHHcc--CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHH
Confidence            4589999999999987  458999999999999999999999997654  3334444443321   12457899999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      +||..||.+|++++++++|||+..
T Consensus       267 ~~L~~dP~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          267 SMLTVNPKKRITADQALKVPWICN  290 (362)
T ss_dssp             HHSCSSGGGSCCHHHHTTSHHHHT
T ss_pred             HHcCCChhhCcCHHHHhcCcccCC
Confidence            999999999999999999999964

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.78  E-value=6.1e-19  Score=117.18  Aligned_cols=100  Identities=23%  Similarity=0.410  Sum_probs=84.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ...|+..|+|||.+..  ..++.++|+||+|+++|++++|..||....  .....+..+.....+...+..+.+++.+||
T Consensus       175 ~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l  252 (279)
T 2w5a_A          175 TFVGTPYYMSPEQMNR--MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRML  252 (279)
T ss_dssp             HHHSCCTTCCHHHHHC--C-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHT
T ss_pred             ccCCCccccChHHhcc--CCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccCCcccCHHHHHHHHHHc
Confidence            4578999999999987  458999999999999999999999997654  334555666666677788999999999999


Q ss_pred             ccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           95 QVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      ..||.+||+++++++|+|+....+
T Consensus       253 ~~~p~~Rps~~~ll~~~~~~~~~~  276 (279)
T 2w5a_A          253 NLKDYHRPSVEEILENPLILEHHH  276 (279)
T ss_dssp             CSSGGGSCCHHHHHTSTTCCGGGS
T ss_pred             CCCcccCCCHHHHHhChhhhhhcc
Confidence            999999999999999999976544

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.78  E-value=6.8e-19  Score=117.62  Aligned_cols=97  Identities=25%  Similarity=0.381  Sum_probs=74.9

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC--CCCCCCCCHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL--PPIPDSVSRDARDFIL   91 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~   91 (133)
                      ...+||+.|+|||.+..   .++.++|+||+|+++|++++|..||.+..  ...........  .......+..+.+++.
T Consensus       184 ~~~~~t~~y~aPE~~~~---~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  260 (285)
T 3is5_A          184 TNAAGTALYMAPEVFKR---DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLK  260 (285)
T ss_dssp             ---CTTGGGCCHHHHTT---CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHH
T ss_pred             cCcccccCcCChHHhcc---CCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHH
Confidence            45689999999999864   37899999999999999999999998754  22222222221  1112346889999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      +||..||.+||+++|+++||||++
T Consensus       261 ~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          261 QMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             HHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             HHccCChhhCcCHHHHhcCHHhhc
Confidence            999999999999999999999975

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.78  E-value=9.9e-19  Score=121.59  Aligned_cols=100  Identities=21%  Similarity=0.399  Sum_probs=81.2

Q ss_pred             hccccccccccccccccC-CCCCCchhHHHHHHHHHHHHHhCCCCCCChH----HHHHHHHhCCCCCCCCCCCHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELPPIPDSVSRDARDFI   90 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~-~~~~~~~~diws~g~~~~~l~~~~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (133)
                      ...+||+.|+|||++... ...++.++|+||+|+++|++++|..||....    ..............+..++..+.+++
T Consensus       172 ~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p~~~s~~~~~li  251 (384)
T 4fr4_A          172 TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLL  251 (384)
T ss_dssp             CCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCCTTSCHHHHHHH
T ss_pred             eccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCCCcCCHHHHHHH
Confidence            456999999999999742 1347899999999999999999999996432    22222233344466778899999999


Q ss_pred             HHHcccCCCCCCC-HHHHhhCCCCCC
Q 032788           91 LKCLQVNPNDRPT-AAQLMEHPFVKR  115 (133)
Q Consensus        91 ~~~l~~~p~~R~s-~~~~l~~~~~~~  115 (133)
                      .+||..||.+|++ +++++.||||..
T Consensus       252 ~~lL~~dP~~R~s~~~~l~~hp~f~~  277 (384)
T 4fr4_A          252 KKLLEPNPDQRFSQLSDVQNFPYMND  277 (384)
T ss_dssp             HHHSCSSGGGSCCSHHHHHTSGGGTT
T ss_pred             HHHhcCCHhHhcccHHHHHcChhhhc
Confidence            9999999999998 899999999975

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.78  E-value=3.5e-19  Score=118.48  Aligned_cols=98  Identities=24%  Similarity=0.396  Sum_probs=80.1

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ....|++.|+|||.+.+  ..++.++|+||+|+++|++++|..||....  .....+. ......+...+..+.+++.+|
T Consensus       165 ~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~  241 (279)
T 3fdn_A          165 TDLCGTLDYLPPEMIEG--RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS-RVEFTFPDFVTEGARDLISRL  241 (279)
T ss_dssp             ---CCCCTTCCHHHHTT--CCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH-HTCCCCCTTSCHHHHHHHHHH
T ss_pred             cccCCCCCccCHhHhcc--CCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHH-hCCCCCCCcCCHHHHHHHHHH
Confidence            34589999999999987  457899999999999999999999998754  2333333 333456777899999999999


Q ss_pred             cccCCCCCCCHHHHhhCCCCCCC
Q 032788           94 LQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      |..||.+||+++++++||||...
T Consensus       242 l~~~p~~Rps~~e~l~h~~~~~~  264 (279)
T 3fdn_A          242 LKHNPSQRPMLREVLEHPWITAN  264 (279)
T ss_dssp             CCSSGGGSCCHHHHHHCHHHHHH
T ss_pred             hccChhhCCCHHHHhhCccccCC
Confidence            99999999999999999999753

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.78  E-value=4.9e-19  Score=122.70  Aligned_cols=97  Identities=20%  Similarity=0.289  Sum_probs=81.3

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...+||+.|+|||++..  ..++.++|+||+|+++|+|++|..||.+.+  .....+... ....+..++..+.+++.+|
T Consensus       197 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~li~~l  273 (373)
T 2r5t_A          197 STFCGTPEYLAPEVLHK--QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK-PLQLKPNITNSARHLLEGL  273 (373)
T ss_dssp             CSBSCCCCCCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHS-CCCCCSSSCHHHHHHHHHH
T ss_pred             ccccCCccccCHHHhCC--CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc-ccCCCCCCCHHHHHHHHHH
Confidence            45699999999999987  458999999999999999999999997654  334444444 3355677899999999999


Q ss_pred             cccCCCCCCCH----HHHhhCCCCCC
Q 032788           94 LQVNPNDRPTA----AQLMEHPFVKR  115 (133)
Q Consensus        94 l~~~p~~R~s~----~~~l~~~~~~~  115 (133)
                      |..||.+|+++    +++++|+||+.
T Consensus       274 L~~dp~~R~~~~~~~~~i~~h~~f~~  299 (373)
T 2r5t_A          274 LQKDRTKRLGAKDDFMEIKSHVFFSL  299 (373)
T ss_dssp             TCSSGGGSTTTTTTHHHHHTSGGGTT
T ss_pred             cccCHHhCCCCCCCHHHHhCCccccC
Confidence            99999999986    68999999975

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.78  E-value=5.5e-19  Score=121.85  Aligned_cols=101  Identities=23%  Similarity=0.345  Sum_probs=72.5

Q ss_pred             hccccccccccccccccCCCCCCch-hHHHHHHHHHHHHHhCCCCCCChH------HHHHHHHhCCC-CCCCCCCCHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLP-ADIWSVGCTVLEMLTRCRPYFGVE------WALFKIARGEL-PPIPDSVSRDAR   87 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~-~diws~g~~~~~l~~~~~p~~~~~------~~~~~~~~~~~-~~~~~~~~~~~~   87 (133)
                      ...+||+.|+|||++...  .+..+ +|+||+|+++|++++|..||.+..      .....+..... .+....++..+.
T Consensus       175 ~~~~gt~~y~aPE~~~~~--~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  252 (361)
T 3uc3_A          175 KSTVGTPAYIAPEVLLRQ--EYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECC  252 (361)
T ss_dssp             ------CTTSCHHHHHCS--SCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHH
T ss_pred             CCCcCCCCcCChhhhcCC--CCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHH
Confidence            446899999999999873  35544 899999999999999999997643      22222222222 222335789999


Q ss_pred             HHHHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           88 DFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        88 ~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      +++.+||..||.+||+++++++||||.+..+
T Consensus       253 ~li~~~L~~dP~~Rps~~ell~hp~f~~~~~  283 (361)
T 3uc3_A          253 HLISRIFVADPATRISIPEIKTHSWFLKNLP  283 (361)
T ss_dssp             HHHHHHSCSCTTTSCCHHHHHTSHHHHTTCC
T ss_pred             HHHHHHccCChhHCcCHHHHHhCcchhcCCc
Confidence            9999999999999999999999999976544

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.78  E-value=4.3e-19  Score=123.51  Aligned_cols=101  Identities=23%  Similarity=0.430  Sum_probs=79.0

Q ss_pred             hccccccccccccccccC---------CCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhC-CCCCCCCCC
Q 032788           16 KWHVSRWNSLTDQVVNSK---------NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARG-ELPPIPDSV   82 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~---------~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~-~~~~~~~~~   82 (133)
                      ...+||+.|+|||++...         ...++.++||||+|+++|++++|..||....   ..+..+... .....+...
T Consensus       214 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (390)
T 2zmd_A          214 DSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP  293 (390)
T ss_dssp             CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCS
T ss_pred             CCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccc
Confidence            356899999999998641         1247899999999999999999999997642   233333322 223446667


Q ss_pred             CHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           83 SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        83 ~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      +..+.+++.+||..||.+||+++++++|||+...
T Consensus       294 ~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  327 (390)
T 2zmd_A          294 EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  327 (390)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             hHHHHHHHHHHcccChhhCCCHHHHhhCcCcccc
Confidence            8899999999999999999999999999999753

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.78  E-value=3.9e-19  Score=121.65  Aligned_cols=101  Identities=23%  Similarity=0.443  Sum_probs=77.2

Q ss_pred             hcccccccccccccccc---------CCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHh-CCCCCCCCCC
Q 032788           16 KWHVSRWNSLTDQVVNS---------KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIAR-GELPPIPDSV   82 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~---------~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~-~~~~~~~~~~   82 (133)
                      +..+||+.|+|||.+..         ....++.++||||+|+++|++++|..||....   ..+..... ......+...
T Consensus       167 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (343)
T 3dbq_A          167 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP  246 (343)
T ss_dssp             ---CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCS
T ss_pred             CCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccC
Confidence            35689999999999863         11347889999999999999999999997643   22222222 2333456677


Q ss_pred             CHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           83 SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        83 ~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      +..+.+++..||..||.+||+++++++|||+...
T Consensus       247 ~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  280 (343)
T 3dbq_A          247 EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  280 (343)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             CHHHHHHHHHHcCCChhHCCCHHHHHhCcccccc
Confidence            8899999999999999999999999999999743

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.78  E-value=4.4e-19  Score=123.85  Aligned_cols=99  Identities=21%  Similarity=0.388  Sum_probs=75.3

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH------HHHHHHHhCCCC---CCCCCCCHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE------WALFKIARGELP---PIPDSVSRDA   86 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~------~~~~~~~~~~~~---~~~~~~~~~~   86 (133)
                      ...+||+.|+|||++..  ..++.++||||+|+++|++++|..||.+..      .....+..+...   .....++..+
T Consensus       221 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  298 (400)
T 1nxk_A          221 TTPCYTPYYVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEV  298 (400)
T ss_dssp             ------CTTCCGGGSCC--CCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHH
T ss_pred             ccCCCCCCccCHhhcCC--CCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHH
Confidence            45689999999999987  458999999999999999999999997543      123333333321   1224678999


Q ss_pred             HHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           87 RDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        87 ~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      .+++.+||..||.+|++++++++||||...
T Consensus       299 ~~li~~~L~~dP~~Rpt~~eil~hp~~~~~  328 (400)
T 1nxk_A          299 KMLIRNLLKTEPTQRMTITEFMNHPWIMQS  328 (400)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             HHHHHHHCCCChhHCcCHHHHhcCccccCC
Confidence            999999999999999999999999999754

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.78  E-value=1.5e-19  Score=123.98  Aligned_cols=98  Identities=32%  Similarity=0.485  Sum_probs=79.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHHHHHHhCCCC---CCCCCCCHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WALFKIARGELP---PIPDSVSRDARD   88 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~   88 (133)
                      ..+||+.|+|||++..  ..++.++|+||+|+++|++++|..||.+..     .....+..+...   ..+..++..+.+
T Consensus       179 ~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~  256 (342)
T 2qr7_A          179 TPCYTANFVAPEVLER--QGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKD  256 (342)
T ss_dssp             CSSCCSSCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHH
T ss_pred             ccCCCccccCHHHhcC--CCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHH
Confidence            4589999999999987  348899999999999999999999997531     334444444332   123568899999


Q ss_pred             HHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           89 FILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        89 ~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      ++.+||..||.+|++++++++|||+..+
T Consensus       257 li~~~L~~dP~~R~t~~~il~hp~~~~~  284 (342)
T 2qr7_A          257 LVSKMLHVDPHQRLTAALVLRHPWIVHW  284 (342)
T ss_dssp             HHHHHTCSSTTTSCCHHHHTTSHHHHTG
T ss_pred             HHHHHCCCChhHCcCHHHHhcCCeecCc
Confidence            9999999999999999999999999653

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.78  E-value=9.7e-20  Score=123.47  Aligned_cols=98  Identities=15%  Similarity=0.272  Sum_probs=75.7

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ...+||+.|+|||.+..  ..++.++|+||+|+++|++++|..++...............+.........+.+++.+||.
T Consensus       234 ~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  311 (332)
T 3qd2_B          234 TGQVGTKLYMSPEQIHG--NNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLS  311 (332)
T ss_dssp             CSCC-CGGGSCHHHHHC--CCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHC
T ss_pred             cccCCCcCccChHHhcC--CCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhccCCCcccccCChhHHHHHHHHcc
Confidence            34579999999999987  4589999999999999999998766543333333333333322233456788999999999


Q ss_pred             cCCCCCCCHHHHhhCCCCCC
Q 032788           96 VNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~~~~~~  115 (133)
                      .||.+||+++++++||||+.
T Consensus       312 ~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          312 PSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             SSGGGSCCHHHHHHSTTCCC
T ss_pred             CCCCcCCCHHHHhhchhhhc
Confidence            99999999999999999975

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.77  E-value=1.4e-18  Score=119.54  Aligned_cols=101  Identities=24%  Similarity=0.373  Sum_probs=79.5

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHHHHHHhCCCCCCCCCCCHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WALFKIARGELPPIPDSVSRDARDFI   90 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (133)
                      ...+||+.|+|||.+.+....++.++|+||+|+++|++++|..||....     ..+........+..+..++..+.+++
T Consensus       218 ~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  297 (355)
T 1vzo_A          218 YDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLI  297 (355)
T ss_dssp             CGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHH
T ss_pred             cCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCCCCcccCHHHHHHH
Confidence            3468999999999998532347889999999999999999999996432     22222222334456778899999999


Q ss_pred             HHHcccCCCCCC-----CHHHHhhCCCCCCC
Q 032788           91 LKCLQVNPNDRP-----TAAQLMEHPFVKRP  116 (133)
Q Consensus        91 ~~~l~~~p~~R~-----s~~~~l~~~~~~~~  116 (133)
                      .+||..||.+|+     +++++++|+||.+.
T Consensus       298 ~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~  328 (355)
T 1vzo_A          298 QRLLMKDPKKRLGCGPRDADEIKEHLFFQKI  328 (355)
T ss_dssp             HHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             HHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence            999999999999     99999999999864

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.77  E-value=6.1e-19  Score=121.01  Aligned_cols=100  Identities=22%  Similarity=0.289  Sum_probs=76.1

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC--CC-----------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG--EL-----------------   75 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~--~~-----------------   75 (133)
                      ..+||+.|+|||.+... ..++.++|+||+|+++|++++|..||.+..  ..+..+...  ..                 
T Consensus       190 ~~~gt~~y~aPE~~~~~-~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (360)
T 3e3p_A          190 AYICSRYYRAPELIFGN-QHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDL  268 (360)
T ss_dssp             STTSCGGGCCHHHHTTC-SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGG
T ss_pred             cccCCcceeCHHHHcCC-CCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccc
Confidence            45789999999998653 347999999999999999999999997654  222222110  00                 


Q ss_pred             ------------CCCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           76 ------------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        76 ------------~~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                                  .......+..+.+++.+||..||.+||++.|+++||||+...
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  322 (360)
T 3e3p_A          269 YNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH  322 (360)
T ss_dssp             GCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred             cccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence                        011122457899999999999999999999999999998643

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.77  E-value=1.9e-19  Score=123.72  Aligned_cols=96  Identities=25%  Similarity=0.391  Sum_probs=73.3

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC-----------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP-----------------   77 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~-----------------   77 (133)
                      ..+||+.|+|||++.+  ..++.++|+||+|+++|++++|..||.+..  ..+..+.....+.                 
T Consensus       218 ~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  295 (360)
T 3llt_A          218 SIINTRQYRAPEVILN--LGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYV  295 (360)
T ss_dssp             SCCSCGGGCCHHHHTT--CCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGE
T ss_pred             CccCcccccCcHHHcC--CCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCcccc
Confidence            4589999999999987  458999999999999999999999997643  2222222111100                 


Q ss_pred             --------CC--------------------CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCC
Q 032788           78 --------IP--------------------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK  114 (133)
Q Consensus        78 --------~~--------------------~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~  114 (133)
                              .+                    ......+.+++.+||..||.+||+++|+++||||+
T Consensus       296 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          296 NKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             ETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             CcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence                    00                    01236677999999999999999999999999985

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.77  E-value=2.1e-18  Score=117.01  Aligned_cols=99  Identities=26%  Similarity=0.351  Sum_probs=79.5

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCC---CCCCCHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI---PDSVSRDARDFI   90 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~   90 (133)
                      ....||+.|+|||.+..  ..++.++|+||+|+++|++++|..||.+..  .....+........   +...+..+.+++
T Consensus       176 ~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  253 (321)
T 2a2a_A          176 KNIFGTPEFVAPEIVNY--EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFI  253 (321)
T ss_dssp             CCCCSCGGGCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHH
T ss_pred             cccCCCCCccCcccccC--CCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccCHHHHHHH
Confidence            34579999999999987  458999999999999999999999997654  33333433322111   245788999999


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      .+||..||.+||+++++++||||...
T Consensus       254 ~~~l~~dp~~Rps~~e~l~hp~~~~~  279 (321)
T 2a2a_A          254 RKLLVKETRKRLTIQEALRHPWITPV  279 (321)
T ss_dssp             HTTSCSSTTTSCCHHHHHHSTTTSCS
T ss_pred             HHHcCCChhhCcCHHHHhcCccccCC
Confidence            99999999999999999999999753

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.77  E-value=6.7e-19  Score=120.92  Aligned_cols=103  Identities=35%  Similarity=0.569  Sum_probs=81.7

Q ss_pred             hcccccccccccccccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC-CCCCCCHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNS-KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP-IPDSVSRDARDFIL   91 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~-~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~   91 (133)
                      ...+||+.|+|||++.. ....++.++|+||+|+++|++++|..||.+..  ..+..+.....+. .+...+..+.+++.
T Consensus       208 ~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  287 (348)
T 1u5q_A          208 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVD  287 (348)
T ss_dssp             CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHH
T ss_pred             CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHH
Confidence            34689999999999853 11457899999999999999999999997654  3334444443332 34567899999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      .||..||.+||+++++++|+|+....+
T Consensus       288 ~~l~~dP~~Rps~~~ll~h~~~~~~~~  314 (348)
T 1u5q_A          288 SCLQKIPQDRPTSEVLLKHRFVLRERP  314 (348)
T ss_dssp             HHTCSSGGGSCCHHHHTTCHHHHSCCC
T ss_pred             HHcccChhhCcCHHHHhhChhhhccCC
Confidence            999999999999999999999976543

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.77  E-value=8.5e-19  Score=116.75  Aligned_cols=98  Identities=27%  Similarity=0.448  Sum_probs=79.4

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCC---CCCCCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELP---PIPDSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~   91 (133)
                      ...||+.|+|||.+..  ..++.++|+||+|+++|++++|..||.+..  .....+..+...   ......+..+.+++.
T Consensus       166 ~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  243 (284)
T 3kk8_A          166 GFAGTPGYLSPEVLKK--DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID  243 (284)
T ss_dssp             CSCSCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHH
T ss_pred             CCCCCcCCcCchhhcC--CCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHHH
Confidence            3589999999999987  458999999999999999999999997654  233333333221   122467899999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      .||..||.+||+++|+++|||+...
T Consensus       244 ~~l~~dp~~Rps~~~~l~h~~~~~~  268 (284)
T 3kk8_A          244 SMLTVNPKKRITADQALKVPWICNR  268 (284)
T ss_dssp             HHSCSSTTTSCCHHHHTTSHHHHSC
T ss_pred             HHcccChhhCCCHHHHhcCccccCC
Confidence            9999999999999999999999754

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.77  E-value=7.1e-19  Score=118.56  Aligned_cols=100  Identities=25%  Similarity=0.463  Sum_probs=72.3

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC--------------------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG--------------------   73 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~--------------------   73 (133)
                      ...+||..|+|||.+.+. ..++.++|+||+|+++|++++|..||.+..  .....+...                    
T Consensus       160 ~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (311)
T 4agu_A          160 DDEVATRWYRSPELLVGD-TQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG  238 (311)
T ss_dssp             ------GGGCCHHHHHTC-SCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTT
T ss_pred             CCCcCCccccChHHHhcC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccccc
Confidence            345899999999999753 347999999999999999999999997653  222111110                    


Q ss_pred             CCCCC----------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           74 ELPPI----------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        74 ~~~~~----------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      ...+.          ....+..+.+++.+||..||.+||+++|+++||||+..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  291 (311)
T 4agu_A          239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENI  291 (311)
T ss_dssp             CCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             CcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhc
Confidence            00000          12467789999999999999999999999999999864

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.77  E-value=4.4e-19  Score=118.59  Aligned_cols=96  Identities=18%  Similarity=0.350  Sum_probs=76.3

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhCCC-CCCCCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGEL-PPIPDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~   92 (133)
                      ...||+.|+|||.+..   .++.++|+||+|+++|++++|..||....   .....+..+.. ...+...+..+.+++..
T Consensus       189 ~~~~t~~y~aPE~~~~---~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  265 (290)
T 1t4h_A          189 AVIGTPEFMAPEMYEE---KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEG  265 (290)
T ss_dssp             ESCSSCCCCCGGGGGT---CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHH
T ss_pred             cccCCcCcCCHHHHhc---cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHH
Confidence            4579999999998864   38999999999999999999999997643   22233332222 12344567899999999


Q ss_pred             HcccCCCCCCCHHHHhhCCCCCC
Q 032788           93 CLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      ||..||.+||+++++++||||+.
T Consensus       266 ~l~~dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          266 CIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HccCChhhCCCHHHHhhCccccc
Confidence            99999999999999999999975

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.77  E-value=1.1e-18  Score=116.78  Aligned_cols=101  Identities=32%  Similarity=0.596  Sum_probs=80.5

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---H-HHHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---W-ALFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ...||+.|+|||.+......++.++|+||+|+++|++++|..||....   . ..........+..+..++..+.+++.+
T Consensus       182 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  261 (295)
T 2clq_A          182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILK  261 (295)
T ss_dssp             CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHH
T ss_pred             ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHHHHH
Confidence            458999999999997532237899999999999999999999996542   1 122223344456677889999999999


Q ss_pred             HcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           93 CLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      ||..||.+||+++++++|+||....
T Consensus       262 ~l~~dp~~Rps~~~ll~~~~~~~~~  286 (295)
T 2clq_A          262 CFEPDPDKRACANDLLVDEFLKVSS  286 (295)
T ss_dssp             TTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred             HccCChhhCCCHHHHhcChhhhhcc
Confidence            9999999999999999999997643

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.77  E-value=1.3e-18  Score=120.19  Aligned_cols=100  Identities=28%  Similarity=0.496  Sum_probs=78.7

Q ss_pred             hccccccccccccccccC----CCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCC---CCCCCHHH
Q 032788           16 KWHVSRWNSLTDQVVNSK----NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI---PDSVSRDA   86 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~----~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~---~~~~~~~~   86 (133)
                      ...+||+.|+|||.+...    ...++.++|+||+|+++|++++|..||.+..  .....+..+.....   +...+..+
T Consensus       257 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  336 (365)
T 2y7j_A          257 RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTV  336 (365)
T ss_dssp             CCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHHSSSCHHH
T ss_pred             ccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHH
Confidence            346899999999998632    1247889999999999999999999997654  33333444432211   24678889


Q ss_pred             HHHHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           87 RDFILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        87 ~~~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      .+++.+||..||.+||+++++++||||++
T Consensus       337 ~~li~~~L~~dP~~Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          337 KDLISRLLQVDPEARLTAEQALQHPFFER  365 (365)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             HHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence            99999999999999999999999999974

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.77  E-value=1.3e-18  Score=118.89  Aligned_cols=94  Identities=22%  Similarity=0.388  Sum_probs=77.9

Q ss_pred             ccccccccccccccccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCChHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGY-GLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~-~~~~diws~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ..+||+.|+|||.+...  .+ +.++|+||+|+++|++++|..||.......     ......+...+..+.+++.+||.
T Consensus       188 ~~~gt~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-----~~~~~~~~~~~~~l~~li~~~L~  260 (335)
T 3dls_A          188 TFCGTIEYCAPEVLMGN--PYRGPELEMWSLGVTLYTLVFEENPFCELEETV-----EAAIHPPYLVSKELMSLVSGLLQ  260 (335)
T ss_dssp             EECSCGGGCCHHHHTTC--CBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT-----TTCCCCSSCCCHHHHHHHHHHTC
T ss_pred             ccCCCccccChhhhcCC--CCCCCcccchhHHHHHHHHHhCCCchhhHHHHH-----hhccCCCcccCHHHHHHHHHHcc
Confidence            45799999999999873  34 789999999999999999999997654221     12223456688999999999999


Q ss_pred             cCCCCCCCHHHHhhCCCCCCCC
Q 032788           96 VNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      .||.+||+++++++||||....
T Consensus       261 ~dP~~Rps~~ell~hp~~~~~~  282 (335)
T 3dls_A          261 PVPERRTTLEKLVTDPWVTQPV  282 (335)
T ss_dssp             SSGGGSCCHHHHHHCTTTTCCC
T ss_pred             CChhhCcCHHHHhcCccccCCc
Confidence            9999999999999999998643

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.77  E-value=1.6e-18  Score=115.34  Aligned_cols=97  Identities=21%  Similarity=0.285  Sum_probs=78.9

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHcccC
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQVN   97 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   97 (133)
                      ..||+.|+|||.+... ..++.++|+||+|+++|+++++..++.... ....+..+..+..+..++..+.+++.+||..|
T Consensus       190 ~~gt~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d  267 (289)
T 1x8b_A          190 EEGDSRFLANEVLQEN-YTHLPKADIFALALTVVCAAGAEPLPRNGD-QWHEIRQGRLPRIPQVLSQEFTELLKVMIHPD  267 (289)
T ss_dssp             CCCCGGGCCHHHHTTC-CTTHHHHHHHHHHHHHHHHTTCCCCCSSSH-HHHHHHTTCCCCCSSCCCHHHHHHHHHHTCSS
T ss_pred             cCCCccccChhHhcCC-CCCCchhhHHHHHHHHHHHhcCCCCCcchh-HHHHHHcCCCCCCCcccCHHHHHHHHHHhCCC
Confidence            4799999999999863 246689999999999999999887665443 34445556666777889999999999999999


Q ss_pred             CCCCCCHHHHhhCCCCCCC
Q 032788           98 PNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        98 p~~R~s~~~~l~~~~~~~~  116 (133)
                      |.+||+++++++||||...
T Consensus       268 p~~Rps~~~ll~h~~~~~~  286 (289)
T 1x8b_A          268 PERRPSAMALVKHSVLLSA  286 (289)
T ss_dssp             GGGSCCHHHHHTCTTC---
T ss_pred             cccCCCHHHHhhChHhhhh
Confidence            9999999999999999764

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.77  E-value=2.1e-19  Score=122.19  Aligned_cols=98  Identities=21%  Similarity=0.318  Sum_probs=80.1

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCC---CCCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI---PDSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~   91 (133)
                      ..+||+.|+|||++..  ..++.++|+||+|+++|++++|..||.+..  .....+........   ...++..+.+++.
T Consensus       162 ~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  239 (321)
T 1tki_A          162 LLFTAPEYYAPEVHQH--DVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVD  239 (321)
T ss_dssp             EEESCGGGSCHHHHTT--CEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHH
T ss_pred             cccCChhhcCcHHhcC--CCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHH
Confidence            4579999999999987  347899999999999999999999997654  33444444433211   2467899999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      +||..||.+||+++|+++||||...
T Consensus       240 ~~L~~dp~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          240 RLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             TTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             HHcCCChhHCcCHHHHhcChhhccC
Confidence            9999999999999999999999764

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.77  E-value=8.1e-19  Score=116.43  Aligned_cols=100  Identities=27%  Similarity=0.396  Sum_probs=74.6

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..+|++.|+|||.+... ...+.++|+||+|+++|++++|..||....  .....+..+. ...+...+..+.+++.+||
T Consensus       169 ~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l  246 (276)
T 2h6d_A          169 TSCGSPNYAAPEVISGR-LYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGV-FYIPEYLNRSVATLLMHML  246 (276)
T ss_dssp             --------CCTGGGTTS-CCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHT
T ss_pred             cccCCccccCHHHHcCC-CCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCc-ccCchhcCHHHHHHHHHHc
Confidence            45789999999999863 123689999999999999999999997654  2333333333 3456778899999999999


Q ss_pred             ccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           95 QVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      ..||.+||+++++++|+||++..+
T Consensus       247 ~~~p~~Rps~~~~l~h~~~~~~~~  270 (276)
T 2h6d_A          247 QVDPLKRATIKDIREHEWFKQDLP  270 (276)
T ss_dssp             CSSGGGSCCHHHHHHSHHHHTTCC
T ss_pred             cCChhhCCCHHHHHhChhhccCch
Confidence            999999999999999999987654

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.77  E-value=2.4e-18  Score=115.74  Aligned_cols=100  Identities=25%  Similarity=0.436  Sum_probs=81.3

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCC---CCCCCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELP---PIPDSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~   91 (133)
                      ..+||+.|+|||.+..  ..++.++|+||+|+++|++++|..||....  .....+..+...   ..+..++..+.+++.
T Consensus       166 ~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  243 (304)
T 2jam_A          166 TACGTPGYVAPEVLAQ--KPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFIC  243 (304)
T ss_dssp             HHHSCCCBCCTTTBSS--CSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHH
T ss_pred             cccCCCCccChHHhcc--CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHHHH
Confidence            3478999999999987  458999999999999999999999997654  333444444321   234567899999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      +||..||.+||+++++++||||....+
T Consensus       244 ~~l~~dp~~Rps~~~~l~h~~~~~~~~  270 (304)
T 2jam_A          244 HLLEKDPNERYTCEKALSHPWIDGNTA  270 (304)
T ss_dssp             HHHCSSTTTSCCHHHHHTSHHHHSSCS
T ss_pred             HHcCCChhHCcCHHHHhcCccccCCCc
Confidence            999999999999999999999976544

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.77  E-value=4.7e-19  Score=122.71  Aligned_cols=97  Identities=26%  Similarity=0.380  Sum_probs=79.2

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC---CCCCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP---IPDSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~   91 (133)
                      ..+||+.|+|||.+..  ..++.++|+||+|+++|++++|..||.+..  ..+..+.......   ....++..+.+++.
T Consensus       247 ~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  324 (373)
T 2x4f_A          247 VNFGTPEFLAPEVVNY--DFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFIS  324 (373)
T ss_dssp             CCCSSCTTCCHHHHTT--CBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHH
T ss_pred             cccCCCcEeChhhccC--CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHH
Confidence            3479999999999987  458999999999999999999999998754  3334444333211   12467899999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      +||..||.+||+++++++||||..
T Consensus       325 ~~L~~dp~~Rps~~e~l~hp~~~~  348 (373)
T 2x4f_A          325 KLLIKEKSWRISASEALKHPWLSD  348 (373)
T ss_dssp             TTSCSSGGGSCCHHHHHHSHHHHC
T ss_pred             HHcCCChhhCCCHHHHhcCcCcCC
Confidence            999999999999999999999975

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.77  E-value=1e-18  Score=117.47  Aligned_cols=97  Identities=30%  Similarity=0.522  Sum_probs=82.5

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ...||+.|+|||.+..  ..++.++|+||+|+++|++++|..||....  .....+........+...+..+.+++..||
T Consensus       178 ~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  255 (303)
T 3a7i_A          178 TFVGTPFWMAPEVIKQ--SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACL  255 (303)
T ss_dssp             CCCSCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCSSCCHHHHHHHHHHC
T ss_pred             ccCCCcCccCHHHHhc--CCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCCCCccccCHHHHHHHHHHc
Confidence            4578999999999987  458899999999999999999999997654  334444555555667788999999999999


Q ss_pred             ccCCCCCCCHHHHhhCCCCCC
Q 032788           95 QVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      ..||.+||+++++++|+|+..
T Consensus       256 ~~dp~~Rps~~~ll~~~~~~~  276 (303)
T 3a7i_A          256 NKEPSFRPTAKELLKHKFILR  276 (303)
T ss_dssp             CSSGGGSCCHHHHTTCHHHHH
T ss_pred             CCChhhCcCHHHHhhChhhhc
Confidence            999999999999999999954

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.77  E-value=2e-18  Score=119.26  Aligned_cols=101  Identities=27%  Similarity=0.343  Sum_probs=77.9

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh--CCC----------------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR--GEL----------------   75 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~--~~~----------------   75 (133)
                      +..+||+.|+|||++... ..++.++|+||+||++|++++|..||.+.+  ..+..+..  +..                
T Consensus       183 ~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~  261 (367)
T 1cm8_A          183 TGYVVTRWYRAPEVILNW-MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNY  261 (367)
T ss_dssp             CSSCSCGGGCCTHHHHTT-TCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHH
T ss_pred             CcCcCCCCcCCHHHHhCC-CCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHH
Confidence            345899999999998763 348999999999999999999999997654  22222211  000                


Q ss_pred             ------------CCCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           76 ------------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        76 ------------~~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                                  .......+..+.+++.+||..||.+|++++++++||||....
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~  315 (367)
T 1cm8_A          262 MKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  315 (367)
T ss_dssp             HHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             HHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence                        011235678999999999999999999999999999998643

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.76  E-value=1.2e-18  Score=117.70  Aligned_cols=101  Identities=27%  Similarity=0.442  Sum_probs=74.9

Q ss_pred             ccccccccccccccccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----------------HHHHHHHhCCCC
Q 032788           17 WHVSRWNSLTDQVVNSK---NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----------------WALFKIARGELP   76 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~---~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----------------~~~~~~~~~~~~   76 (133)
                      ..+||+.|+|||.+...   ...++.++|+||+|+++|++++|..||.+..                 .....+..+.. 
T Consensus       180 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-  258 (316)
T 2ac3_A          180 TPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKY-  258 (316)
T ss_dssp             --CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCC-
T ss_pred             cccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCc-
Confidence            34799999999998641   0126789999999999999999999996531                 12233333332 


Q ss_pred             CCC----CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           77 PIP----DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        77 ~~~----~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      ..+    ..++..+.+++.+||..||.+||+++++++||||....+
T Consensus       259 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~  304 (316)
T 2ac3_A          259 EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAP  304 (316)
T ss_dssp             CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC----
T ss_pred             ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCCC
Confidence            222    357889999999999999999999999999999987543

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.76  E-value=2.8e-18  Score=121.41  Aligned_cols=101  Identities=29%  Similarity=0.407  Sum_probs=69.7

Q ss_pred             hhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-----------CCCCCCChH-------------------
Q 032788           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-----------RCRPYFGVE-------------------   64 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-----------~~~p~~~~~-------------------   64 (133)
                      .+..+||+.|+|||++... ..|+.++|+||+||++|+|++           +.++|.+..                   
T Consensus       240 ~~~~~gt~~Y~aPE~~~~~-~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~  318 (458)
T 3rp9_A          240 LTGHVVTRWYRAPELILLQ-ENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTR  318 (458)
T ss_dssp             -----CCCTTCCHHHHTTC-CCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CH
T ss_pred             ccCCcccccccChHHhhCC-CCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCcccccccccccccccccccc
Confidence            3456899999999987542 458999999999999999998           555554321                   


Q ss_pred             ---HHHHHHHh--CC--------------------CC--------CCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCC
Q 032788           65 ---WALFKIAR--GE--------------------LP--------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHP  111 (133)
Q Consensus        65 ---~~~~~~~~--~~--------------------~~--------~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~  111 (133)
                         ..+..+..  +.                    .+        ......+..+.+++.+||..||.+|++++|+++||
T Consensus       319 ~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp  398 (458)
T 3rp9_A          319 GNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHP  398 (458)
T ss_dssp             HHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred             CCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCH
Confidence               11111110  00                    00        01124578999999999999999999999999999


Q ss_pred             CCCCC
Q 032788          112 FVKRP  116 (133)
Q Consensus       112 ~~~~~  116 (133)
                      ||+..
T Consensus       399 ~f~~~  403 (458)
T 3rp9_A          399 FFKEV  403 (458)
T ss_dssp             GGTTT
T ss_pred             hhhhc
Confidence            99875

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.76  E-value=1.3e-18  Score=118.41  Aligned_cols=101  Identities=25%  Similarity=0.389  Sum_probs=64.4

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---------HHHHHHHhCCCCCC---CCCCC
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---------WALFKIARGELPPI---PDSVS   83 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---------~~~~~~~~~~~~~~---~~~~~   83 (133)
                      ...+||+.|+|||.+..  ..++.++|+||+|+++|++++|..||.+..         .....+..+.....   +..++
T Consensus       167 ~~~~~t~~y~aPE~~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s  244 (325)
T 3kn6_A          167 KTPCFTLHYAAPELLNQ--NGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVS  244 (325)
T ss_dssp             -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSC
T ss_pred             cccCCCcCccCHHHhcC--CCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCC
Confidence            44588999999999987  458999999999999999999999997532         22333333332111   12578


Q ss_pred             HHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           84 RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        84 ~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      ..+.+++.+||..||.+||+++++++|+|+.....
T Consensus       245 ~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~  279 (325)
T 3kn6_A          245 QEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQ  279 (325)
T ss_dssp             HHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCC
T ss_pred             HHHHHHHHHHCCCChhHCCCHHHHhcChhhccCcc
Confidence            89999999999999999999999999999986533

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.76  E-value=6.1e-19  Score=117.21  Aligned_cols=97  Identities=27%  Similarity=0.465  Sum_probs=59.2

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..+||+.|+|||.+..  ..++.++|+||+|+++|++++|..||....  .....+. ......+...+..+.+++.+||
T Consensus       171 ~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l  247 (278)
T 3cok_A          171 TLCGTPNYISPEIATR--SAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV-LADYEMPSFLSIEAKDLIHQLL  247 (278)
T ss_dssp             -----------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CC-SSCCCCCTTSCHHHHHHHHHHS
T ss_pred             eccCCCCcCCcchhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHh-hcccCCccccCHHHHHHHHHHc
Confidence            4578999999999987  447889999999999999999999997644  2222221 1222446678899999999999


Q ss_pred             ccCCCCCCCHHHHhhCCCCCCC
Q 032788           95 QVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      ..||.+||+++++++||||...
T Consensus       248 ~~dp~~Rps~~~~l~h~~~~~~  269 (278)
T 3cok_A          248 RRNPADRLSLSSVLDHPFMSRN  269 (278)
T ss_dssp             CSSGGGSCCHHHHTTSTTTC--
T ss_pred             ccCHhhCCCHHHHhcCccccCC
Confidence            9999999999999999999764

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.76  E-value=1e-18  Score=124.56  Aligned_cols=100  Identities=28%  Similarity=0.497  Sum_probs=81.4

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCC---CCCCCCCHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELP---PIPDSVSRDARDFI   90 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~   90 (133)
                      ...+||+.|+|||++.+   .++.++|+||+|+++|++++|..||.+..  ..+..+..+...   +.+..++..+.+++
T Consensus       181 ~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li  257 (486)
T 3mwu_A          181 KDRIGTAYYIAPEVLRG---TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI  257 (486)
T ss_dssp             -CCTTGGGGCCGGGGGS---CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHH
T ss_pred             CCCcCCCCCCCHHHhCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHH
Confidence            34589999999999975   38999999999999999999999997754  344445444332   12346789999999


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      .+||..||.+||++.++++|||+++...
T Consensus       258 ~~~L~~dp~~R~t~~~~l~hp~~~~~~~  285 (486)
T 3mwu_A          258 RKMLTFHPSLRITATQCLEHPWIQKYSS  285 (486)
T ss_dssp             HHHTCSSTTTSCCHHHHHHCHHHHHTCC
T ss_pred             HHHcCCChhhCcCHHHHhcCHhhccCcc
Confidence            9999999999999999999999976544

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.76  E-value=6.6e-19  Score=127.67  Aligned_cols=98  Identities=23%  Similarity=0.431  Sum_probs=81.8

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHHHHHHhCCCCCCCCCCCHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WALFKIARGELPPIPDSVSRDARDFI   90 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (133)
                      ...+||+.|+|||++..  ..++.++|+||+|+++|+|++|..||.+..     ..+...........+..++..+.+++
T Consensus       343 ~~~~GT~~Y~APEvl~~--~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p~~~s~~~~dLI  420 (576)
T 2acx_A          343 KGRVGTVGYMAPEVVKN--ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLC  420 (576)
T ss_dssp             ECCCSCGGGCCHHHHTT--CEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHH
T ss_pred             cccCCCccccCHHHHcC--CCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCCccCCHHHHHHH
Confidence            34699999999999987  458999999999999999999999997642     23333333344456778899999999


Q ss_pred             HHHcccCCCCCC-----CHHHHhhCCCCCC
Q 032788           91 LKCLQVNPNDRP-----TAAQLMEHPFVKR  115 (133)
Q Consensus        91 ~~~l~~~p~~R~-----s~~~~l~~~~~~~  115 (133)
                      .+||..||.+|+     +++++++||||+.
T Consensus       421 ~~lL~~dP~~R~g~~~~sa~eil~HpfF~~  450 (576)
T 2acx_A          421 SQLLCKDPAERLGCRGGSAREVKEHPLFKK  450 (576)
T ss_dssp             HHHTCSSGGGSTTCSSSHHHHHHTSGGGTT
T ss_pred             HHhccCCHHHcCCCCCCCHHHHHhChhhcc
Confidence            999999999999     7899999999986

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.76  E-value=1.4e-18  Score=122.02  Aligned_cols=100  Identities=26%  Similarity=0.369  Sum_probs=73.6

Q ss_pred             hcccccccccccccccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhCCCCCC---CCCCCHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNS-KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELPPI---PDSVSRDARD   88 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~-~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~   88 (133)
                      ...+||+.|+|||.+.. ....++.++|+||+|+++|++++|..||....   .....+..+.....   +..++..+.+
T Consensus       299 ~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  378 (419)
T 3i6u_A          299 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD  378 (419)
T ss_dssp             ------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHH
T ss_pred             cccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHH
Confidence            45689999999999863 12457889999999999999999999997543   22233333333222   2467889999


Q ss_pred             HHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           89 FILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        89 ~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      ++.+||..||.+||+++++++||||+.
T Consensus       379 li~~~L~~dP~~Rps~~e~l~hp~~~~  405 (419)
T 3i6u_A          379 LVKKLLVVDPKARFTTEEALRHPWLQD  405 (419)
T ss_dssp             HHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             HHHHHccCChhHCcCHHHHhCCcccCC
Confidence            999999999999999999999999975

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.76  E-value=7e-18  Score=118.76  Aligned_cols=102  Identities=26%  Similarity=0.321  Sum_probs=71.6

Q ss_pred             hhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhC-----------CCCCCChH-------------------
Q 032788           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-----------CRPYFGVE-------------------   64 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~-----------~~p~~~~~-------------------   64 (133)
                      .+..+||+.|+|||++... ..++.++|+||+||++|++++|           .++|.+..                   
T Consensus       208 ~~~~~gt~~Y~APE~~~~~-~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~  286 (432)
T 3n9x_A          208 LTSHVVTRWYRAPELILLQ-ENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNR  286 (432)
T ss_dssp             ---CCCCCTTCCHHHHTTC-SCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHH
T ss_pred             ccCCCCCccccCHHHHhcC-CCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchH
Confidence            3567999999999997542 4589999999999999999974           33332210                   


Q ss_pred             HHHHHHH-----------------------hCCCCCC-------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCC
Q 032788           65 WALFKIA-----------------------RGELPPI-------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK  114 (133)
Q Consensus        65 ~~~~~~~-----------------------~~~~~~~-------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~  114 (133)
                      ..+..+.                       .......       ....+..+.+++.+||..||.+|++++|+++||||+
T Consensus       287 ~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~  366 (432)
T 3n9x_A          287 DQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLK  366 (432)
T ss_dssp             HHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGT
T ss_pred             HHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhh
Confidence            1111111                       1111111       134788999999999999999999999999999998


Q ss_pred             CCC
Q 032788          115 RPL  117 (133)
Q Consensus       115 ~~~  117 (133)
                      ...
T Consensus       367 ~~~  369 (432)
T 3n9x_A          367 DVR  369 (432)
T ss_dssp             TTC
T ss_pred             hcc
Confidence            643

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.76  E-value=1.6e-18  Score=116.09  Aligned_cols=97  Identities=25%  Similarity=0.446  Sum_probs=80.6

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ...||+.|+|||.+..  ..++.++|+|++|+++|++++|..||....  .....+.. .....+...+..+.+++.+||
T Consensus       174 ~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l  250 (294)
T 2rku_A          174 VLCGTPNYIAPEVLSK--KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK-NEYSIPKHINPVAASLIQKML  250 (294)
T ss_dssp             CCCSCCSSCCHHHHTT--SCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT-TCCCCCTTSCHHHHHHHHHHT
T ss_pred             cccCCCCcCCcchhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhh-ccCCCccccCHHHHHHHHHHc
Confidence            3578999999999987  447899999999999999999999997654  23333333 334556778899999999999


Q ss_pred             ccCCCCCCCHHHHhhCCCCCCC
Q 032788           95 QVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      ..||.+||+++++++|+||...
T Consensus       251 ~~~p~~Rps~~~ll~~~~~~~~  272 (294)
T 2rku_A          251 QTDPTARPTINELLNDEFFTSG  272 (294)
T ss_dssp             CSSGGGSCCGGGGGGSHHHHTS
T ss_pred             ccChhhCcCHHHHhhChheecC
Confidence            9999999999999999999754

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.76  E-value=3.9e-18  Score=114.42  Aligned_cols=102  Identities=37%  Similarity=0.566  Sum_probs=78.0

Q ss_pred             hcccccccccccccccc---CCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC--CCCCCCHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNS---KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP--IPDSVSRDARD   88 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~---~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~   88 (133)
                      ....||+.|+|||.+..   ....++.++|+||+|+++|++++|..||....  .....+.....+.  .+..++..+.+
T Consensus       175 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  254 (302)
T 2j7t_A          175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRD  254 (302)
T ss_dssp             ----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHH
T ss_pred             ccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHHHH
Confidence            34589999999999841   11457899999999999999999999997654  2333333333322  24567889999


Q ss_pred             HHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           89 FILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        89 ~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      ++..||..||.+||+++++++||||....
T Consensus       255 li~~~l~~dp~~Rps~~~ll~h~~~~~~~  283 (302)
T 2j7t_A          255 FLKIALDKNPETRPSAAQLLEHPFVSSIT  283 (302)
T ss_dssp             HHHHHSCSCTTTSCCHHHHTTSTTTTTCC
T ss_pred             HHHHHcccChhhCCCHHHHhcChHHhhhc
Confidence            99999999999999999999999998644

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.76  E-value=1.3e-18  Score=125.58  Aligned_cols=96  Identities=20%  Similarity=0.321  Sum_probs=79.8

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HH-HHHHHhCCCCCCCCCCCHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WA-LFKIARGELPPIPDSVSRDARDFI   90 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~   90 (133)
                      ..+||+.|+|||++.+  ..|+.++|+||+|+++|+|++|..||.+..     .. ...+.. .....+..++..+.+++
T Consensus       348 ~~~GT~~Y~APE~l~~--~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~-~~~~~p~~~s~~~~~li  424 (543)
T 3c4z_A          348 GYAGTPGFMAPELLLG--EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE-QAVTYPDKFSPASKDFC  424 (543)
T ss_dssp             CCCSCTTTSCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHH-CCCCCCTTSCHHHHHHH
T ss_pred             cccCCccccChhhhcC--CCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhh-cccCCCcccCHHHHHHH
Confidence            4599999999999987  458999999999999999999999997642     22 233333 33456778899999999


Q ss_pred             HHHcccCCCCCCC-----HHHHhhCCCCCC
Q 032788           91 LKCLQVNPNDRPT-----AAQLMEHPFVKR  115 (133)
Q Consensus        91 ~~~l~~~p~~R~s-----~~~~l~~~~~~~  115 (133)
                      .+||..||.+|++     ++++++||||+.
T Consensus       425 ~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~  454 (543)
T 3c4z_A          425 EALLQKDPEKRLGFRDGSCDGLRTHPLFRD  454 (543)
T ss_dssp             HHHSCSSGGGSCCCBTTBSHHHHTSGGGTT
T ss_pred             HHhccCCHhHCCCCcccCHHHHHcCccccC
Confidence            9999999999996     489999999986

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.76  E-value=3.7e-19  Score=126.68  Aligned_cols=100  Identities=26%  Similarity=0.451  Sum_probs=81.5

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCC---CCCCCCCHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELP---PIPDSVSRDARDFI   90 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~   90 (133)
                      ...+||+.|+|||++.+   .++.++|+||+|+++|++++|..||.+..  ..+..+..+...   +.+..++..+.+++
T Consensus       186 ~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li  262 (484)
T 3nyv_A          186 KDKIGTAYYIAPEVLHG---TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLI  262 (484)
T ss_dssp             HHHTTGGGTCCHHHHHT---CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHH
T ss_pred             ccCCCCccccCceeecC---CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHH
Confidence            34589999999999875   38999999999999999999999998764  344455544332   12246789999999


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      .+||..+|.+||+++++++|||++....
T Consensus       263 ~~~L~~dp~~R~s~~e~l~h~~~~~~~~  290 (484)
T 3nyv_A          263 RKMLTYVPSMRISARDALDHEWIQTYTK  290 (484)
T ss_dssp             HHHTCSSGGGSCCHHHHHTSHHHHHHTC
T ss_pred             HHHCCCChhHCcCHHHHhhChhhccccc
Confidence            9999999999999999999999976443

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.76  E-value=9.9e-19  Score=122.49  Aligned_cols=101  Identities=26%  Similarity=0.377  Sum_probs=79.3

Q ss_pred             hccccccccccccccccCCC--CCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC---CCCCCCCCCCHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNG--GYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG---ELPPIPDSVSRDARD   88 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~--~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~   88 (133)
                      .+.+||+.|+|||++.....  .++.++|+||+|+++|+|++|..||.+.+  .....+...   ...+....++..+.+
T Consensus       227 ~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~  306 (410)
T 3v8s_A          227 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKN  306 (410)
T ss_dssp             CSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHHHHH
T ss_pred             cCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccccHHHHH
Confidence            36799999999999986311  16789999999999999999999998754  233333221   222233468999999


Q ss_pred             HHHHHcccCCCC--CCCHHHHhhCCCCCCC
Q 032788           89 FILKCLQVNPND--RPTAAQLMEHPFVKRP  116 (133)
Q Consensus        89 ~~~~~l~~~p~~--R~s~~~~l~~~~~~~~  116 (133)
                      ++.+||..+|.+  |++++++++||||+..
T Consensus       307 li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~  336 (410)
T 3v8s_A          307 LICAFLTDREVRLGRNGVEEIKRHLFFKND  336 (410)
T ss_dssp             HHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred             HHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence            999999988877  9999999999999863

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.76  E-value=1.3e-18  Score=120.63  Aligned_cols=98  Identities=21%  Similarity=0.367  Sum_probs=76.5

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC--C-----------------C
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG--E-----------------L   75 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~--~-----------------~   75 (133)
                      ..+||+.|+|||.+.+. ..++.++|+||+|+++|++++|..||.+..  ..+..+...  .                 .
T Consensus       200 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~  278 (383)
T 3eb0_A          200 AYICSRFYRAPELMLGA-TEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRF  278 (383)
T ss_dssp             CCCCCSSCCCHHHHTTC-SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCC
T ss_pred             CcccCCCccCHHHhcCC-CCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccC
Confidence            45889999999998763 348999999999999999999999997653  222222210  0                 0


Q ss_pred             CC---------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           76 PP---------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        76 ~~---------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      +.         .+...+..+.+++.+||..||.+|+++.|+++||||+.
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  327 (383)
T 3eb0_A          279 PTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH  327 (383)
T ss_dssp             CCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHH
T ss_pred             CccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHH
Confidence            00         23456788999999999999999999999999999963

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.76  E-value=1.3e-18  Score=116.04  Aligned_cols=99  Identities=29%  Similarity=0.500  Sum_probs=76.2

Q ss_pred             cccccccccccccccc--CCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhCCCCC-CCCCCCHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNS--KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELPP-IPDSVSRDARDFI   90 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~--~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~   90 (133)
                      ...||+.|+|||.+..  ....++.++|+||+|+++|++++|..||....   ............. .....+..+.+++
T Consensus       168 ~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  247 (290)
T 3fme_A          168 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFT  247 (290)
T ss_dssp             --CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHH
T ss_pred             ccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHH
Confidence            3489999999999732  11457899999999999999999999997532   3333333333333 3456889999999


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      .+||..||.+||+++++++||||..
T Consensus       248 ~~~l~~~p~~Rpt~~e~l~hp~f~~  272 (290)
T 3fme_A          248 SQCLKKNSKERPTYPELMQHPFFTL  272 (290)
T ss_dssp             HHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             HHHhhcChhhCcCHHHHHhCccccc
Confidence            9999999999999999999999964

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.76  E-value=1.1e-18  Score=120.09  Aligned_cols=101  Identities=27%  Similarity=0.449  Sum_probs=74.1

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--------HHHHHHHh--CCC----------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--------WALFKIAR--GEL----------   75 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--------~~~~~~~~--~~~----------   75 (133)
                      ...+||+.|+|||++.+  ..++.++|+||+|+++|++++|..||.+..        ..+..+..  +..          
T Consensus       193 ~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  270 (373)
T 1q8y_A          193 TNSIQTREYRSPEVLLG--APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKY  270 (373)
T ss_dssp             CSCCSCGGGCCHHHHHT--CCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTT
T ss_pred             CCCCCCccccCcHHHhC--CCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccch
Confidence            34589999999999987  458999999999999999999999997532        11111111  000          


Q ss_pred             -----------------------------CCCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           76 -----------------------------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        76 -----------------------------~~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                                                   ...+...+..+.+++.+||..||.+||+++++++||||.....
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  342 (373)
T 1q8y_A          271 TRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLG  342 (373)
T ss_dssp             HHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTT
T ss_pred             hhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhcccC
Confidence                                         0111223457889999999999999999999999999987543

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.76  E-value=2.5e-19  Score=123.81  Aligned_cols=100  Identities=25%  Similarity=0.360  Sum_probs=72.0

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCC---------------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI---------------   78 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~---------------   78 (133)
                      ...+||+.|+|||++.+  ..++.++|+||+|+++|++++|..||.+.+  ..+..+......+.               
T Consensus       184 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  261 (371)
T 2xrw_A          184 TPYVVTRYYRAPEVILG--MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYV  261 (371)
T ss_dssp             ------CTTCCHHHHTT--CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHH
T ss_pred             CCceecCCccCHHHhcC--CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHH
Confidence            34689999999999987  458999999999999999999999997654  22333322211100               


Q ss_pred             --------------------CC------CCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           79 --------------------PD------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        79 --------------------~~------~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                                          +.      ..+..+.+++.+||..||.+|+|++++++||||....
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~  326 (371)
T 2xrw_A          262 ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY  326 (371)
T ss_dssp             HSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred             hhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhhc
Confidence                                00      0145688999999999999999999999999997643

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.76  E-value=5.5e-19  Score=120.73  Aligned_cols=100  Identities=23%  Similarity=0.394  Sum_probs=75.1

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh--CCCCC--------------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR--GELPP--------------   77 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~--~~~~~--------------   77 (133)
                      ...+||+.|+|||++.+  ..++.++|+||+|+++|++++|..||....  ..+..+..  +..+.              
T Consensus       197 ~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  274 (355)
T 2eu9_A          197 TTIVATRHYRPPEVILE--LGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYK  274 (355)
T ss_dssp             CSSCSCGGGCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEET
T ss_pred             cCCcCCCcccCCeeeec--CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcc
Confidence            34589999999999987  458999999999999999999999997643  21111111  11000              


Q ss_pred             ---------------------------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           78 ---------------------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        78 ---------------------------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                                                 .....+..+.+++.+||..||.+||+++++++||||....
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  341 (355)
T 2eu9_A          275 GGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLT  341 (355)
T ss_dssp             TEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCC
T ss_pred             cccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCC
Confidence                                       0001134788999999999999999999999999998653

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.75  E-value=4e-18  Score=116.69  Aligned_cols=101  Identities=25%  Similarity=0.405  Sum_probs=77.2

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh--CCC-----------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR--GEL-----------------   75 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~--~~~-----------------   75 (133)
                      ..+||+.|+|||++... ..++.++|+||+|+++|++++|..||.+..  ..+..+..  +..                 
T Consensus       181 ~~~gt~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (353)
T 2b9h_A          181 EFVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREY  259 (353)
T ss_dssp             CCCCCGGGCCHHHHHSC-CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHH
T ss_pred             hccccccccCCeeeccC-CCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHH
Confidence            35889999999988652 458999999999999999999999997654  11111111  000                 


Q ss_pred             ----CC--------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           76 ----PP--------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        76 ----~~--------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                          +.        ....++..+.+++.+||..||.+||+++++++||||+....
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~  314 (353)
T 2b9h_A          260 IKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHD  314 (353)
T ss_dssp             HHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             hhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCC
Confidence                00        01356788999999999999999999999999999987544

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.75  E-value=5.8e-19  Score=119.85  Aligned_cols=97  Identities=28%  Similarity=0.444  Sum_probs=73.6

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh--CCCC----------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR--GELP----------------   76 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~--~~~~----------------   76 (133)
                      ..+||+.|+|||.+..  ..++.++|+||+|+++|++++|..||....  .....+..  +..+                
T Consensus       193 ~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  270 (339)
T 1z57_A          193 TLVSTRHYRAPEVILA--LGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHD  270 (339)
T ss_dssp             SSCSCGGGCCHHHHTT--SCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETT
T ss_pred             cccCCccccChHHhhC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhc
Confidence            4589999999999987  458999999999999999999999997643  11111111  1000                


Q ss_pred             -------------------------CCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           77 -------------------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        77 -------------------------~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                                               ......+..+.+++.+||..||.+||+++|+++||||+.
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~  334 (339)
T 1z57_A          271 RLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDL  334 (339)
T ss_dssp             EECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGG
T ss_pred             cccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHH
Confidence                                     001112356889999999999999999999999999975

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.75  E-value=2.5e-18  Score=122.83  Aligned_cols=97  Identities=28%  Similarity=0.450  Sum_probs=79.8

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC---CCCCCCHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP---IPDSVSRDARDFI   90 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~   90 (133)
                      ...+||+.|+|||++..   .++.++|+||+|+++|++++|..||.+..  ..+..+..+....   .+..++..+.+++
T Consensus       196 ~~~~gt~~y~aPE~l~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li  272 (494)
T 3lij_A          196 KERLGTAYYIAPEVLRK---KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLI  272 (494)
T ss_dssp             CCCCSCTTTCCHHHHTT---CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHH
T ss_pred             cccCCCcCeeCHHHHcc---cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHH
Confidence            34589999999999864   38999999999999999999999998754  3444444443322   1246789999999


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      .+||..+|.+||+++++++|||++.
T Consensus       273 ~~~L~~dp~~R~s~~e~l~hp~~~~  297 (494)
T 3lij_A          273 KQMLQFDSQRRISAQQALEHPWIKE  297 (494)
T ss_dssp             HHHTCSSTTTSCCHHHHHTCHHHHH
T ss_pred             HHHCCCChhhCccHHHHhcCccccc
Confidence            9999999999999999999999965

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.75  E-value=7.6e-18  Score=114.11  Aligned_cols=101  Identities=28%  Similarity=0.411  Sum_probs=78.9

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC--CC----------------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG--EL----------------   75 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~--~~----------------   75 (133)
                      ....||..|+|||.+..  ..++.++|+||+|+++|++++|..||.+..  ..+..+...  ..                
T Consensus       177 ~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  254 (326)
T 1blx_A          177 TSVVVTLWYRAPEVLLQ--SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAF  254 (326)
T ss_dssp             CCCCCCCTTCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGS
T ss_pred             cccccccceeCHHHHhc--CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhh
Confidence            34688999999999987  458999999999999999999999997654  222222211  00                


Q ss_pred             --------CCCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           76 --------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        76 --------~~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                              ......++..+.+++.+||..||.+||+++++++||||.....
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~  305 (326)
T 1blx_A          255 HSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER  305 (326)
T ss_dssp             CCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred             cccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccch
Confidence                    0112456788999999999999999999999999999986533

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.75  E-value=5.3e-19  Score=122.49  Aligned_cols=98  Identities=27%  Similarity=0.445  Sum_probs=72.7

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--------HHHHHHHh--CCCC---------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--------WALFKIAR--GELP---------   76 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--------~~~~~~~~--~~~~---------   76 (133)
                      ...+||+.|+|||++.+  ..++.++||||+|+++|+|++|..||....        ..+..+..  +..+         
T Consensus       251 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  328 (397)
T 1wak_A          251 TEDIQTRQYRSLEVLIG--SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKY  328 (397)
T ss_dssp             CSCCSCGGGCCHHHHHT--SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTT
T ss_pred             ccCCCCCcccCChhhcC--CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccc
Confidence            34589999999999987  448999999999999999999999996421        11111111  1100         


Q ss_pred             ------------------------------CCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           77 ------------------------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        77 ------------------------------~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                                                    ..+...+..+.+++.+||..||.+||+++|+++||||+.
T Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          329 SKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             GGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred             cccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence                                          001112356789999999999999999999999999963

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.75  E-value=2.5e-18  Score=116.11  Aligned_cols=101  Identities=23%  Similarity=0.432  Sum_probs=76.8

Q ss_pred             ccccccccccccccccC---------CCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHh-CCCCCCCCCCC
Q 032788           17 WHVSRWNSLTDQVVNSK---------NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIAR-GELPPIPDSVS   83 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~---------~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~-~~~~~~~~~~~   83 (133)
                      ..+||+.|+|||.+...         ...++.++|+||+|+++|++++|..||....   ........ ......+...+
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (313)
T 3cek_A          187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE  266 (313)
T ss_dssp             ---CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSC
T ss_pred             CCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccch
Confidence            45799999999998641         1247889999999999999999999997643   22222222 23334566678


Q ss_pred             HHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           84 RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        84 ~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      ..+.+++.+||..||.+||+++++++|+||....
T Consensus       267 ~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~  300 (313)
T 3cek_A          267 KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  300 (313)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC-
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHhcCccccCCC
Confidence            8999999999999999999999999999997643

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.75  E-value=3.7e-18  Score=117.32  Aligned_cols=99  Identities=29%  Similarity=0.465  Sum_probs=75.9

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH-H----------------------------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-A----------------------------   66 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~-~----------------------------   66 (133)
                      ...+||+.|+|||.+..  ..++.++|+||+|+++|++++|..||..... .                            
T Consensus       188 ~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (360)
T 3eqc_A          188 NSFVGTRSYMSPERLQG--THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLN  265 (360)
T ss_dssp             ---CCCCTTCCHHHHTT--CCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC----------------------
T ss_pred             cCCCCCCCeECHHHHcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccc
Confidence            45689999999999987  4589999999999999999999999865321 1                            


Q ss_pred             ---------------HHHHHhCCCCCC-CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           67 ---------------LFKIARGELPPI-PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        67 ---------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                                     ...+.....+.. ....+..+.+++.+||..||.+||+++++++||||+..
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  331 (360)
T 3eqc_A          266 KFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  331 (360)
T ss_dssp             --------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHH
T ss_pred             ccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcc
Confidence                           111122222222 23467899999999999999999999999999999753

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.75  E-value=1.4e-18  Score=118.53  Aligned_cols=97  Identities=26%  Similarity=0.466  Sum_probs=80.7

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..+||+.|+|||.+..  ..++.++|+||+|+++|++++|..||....  .....+.... ...+..++..+.+++.+||
T Consensus       200 ~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l  276 (335)
T 2owb_A          200 VLCGTPNYIAPEVLSK--KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNE-YSIPKHINPVAASLIQKML  276 (335)
T ss_dssp             CCCSCCSSCCHHHHHT--SCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC-CCCCTTSCHHHHHHHHHHT
T ss_pred             ccCCCccccCHHHhcc--CCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCC-CCCCccCCHHHHHHHHHHc
Confidence            3579999999999987  448899999999999999999999997654  3333333332 3456778899999999999


Q ss_pred             ccCCCCCCCHHHHhhCCCCCCC
Q 032788           95 QVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      ..||.+||+++++++|+||...
T Consensus       277 ~~dp~~Rps~~ell~~~~~~~~  298 (335)
T 2owb_A          277 QTDPTARPTINELLNDEFFTSG  298 (335)
T ss_dssp             CSSGGGSCCGGGGGGSHHHHTS
T ss_pred             cCChhHCcCHHHHhcCccccCC
Confidence            9999999999999999999754

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.75  E-value=3.4e-18  Score=118.18  Aligned_cols=100  Identities=33%  Similarity=0.413  Sum_probs=76.6

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh--CC-----------------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR--GE-----------------   74 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~--~~-----------------   74 (133)
                      ...+||+.|+|||.+... ..++.++|+||+|+++|++++|..||.+..  ..+..+..  +.                 
T Consensus       199 ~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  277 (371)
T 4exu_A          199 TGYVVTRWYRAPEVILSW-MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSY  277 (371)
T ss_dssp             -CTTCCCTTSCHHHHSCC-SCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHH
T ss_pred             CCcccCccccCHHHhcCC-CCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhh
Confidence            346889999999998763 348899999999999999999999997643  22221111  00                 


Q ss_pred             -----CCC------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           75 -----LPP------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        75 -----~~~------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                           ...      .....+..+.+++.+||..||.+|++++|+++||||+..
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  330 (371)
T 4exu_A          278 IQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF  330 (371)
T ss_dssp             HHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             hhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccC
Confidence                 000      123468899999999999999999999999999999864

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.75  E-value=5.6e-18  Score=115.76  Aligned_cols=99  Identities=20%  Similarity=0.317  Sum_probs=78.2

Q ss_pred             hccccccccccccccccCCCCCCc-hhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhCCCCCCC------------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGL-PADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELPPIP------------   79 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~-~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~~~~~~~------------   79 (133)
                      ....|+..|+|||.+... ..++. ++|+||+|+++|++++|..||....   .....+..+ ....+            
T Consensus       208 ~~~~~~~~y~aPE~~~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~  285 (348)
T 2pml_X          208 KGSRGTYEFMPPEFFSNE-SSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTK-NIEYPLDRNHFLYPLTN  285 (348)
T ss_dssp             CSSCSCGGGCCGGGGSSC-CCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSC-CCCCCCSSSSSTTTTCC
T ss_pred             cCCCCCcCccCchhhcCC-CCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhcc-CcCCccchhhhhccccc
Confidence            345899999999999873 24555 9999999999999999999997653   233333332 22333            


Q ss_pred             -------CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           80 -------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        80 -------~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                             ...+..+.+++.+||..||.+||+++++++||||...
T Consensus       286 ~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~  329 (348)
T 2pml_X          286 KKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADT  329 (348)
T ss_dssp             --------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTC
T ss_pred             cccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCC
Confidence                   4578899999999999999999999999999999864

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.75  E-value=2.3e-18  Score=119.07  Aligned_cols=101  Identities=27%  Similarity=0.290  Sum_probs=74.9

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC--C-----------------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG--E-----------------   74 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~--~-----------------   74 (133)
                      +..+||..|+|||.+... ..++.++|+||+|+++|++++|..||.+.+  ..+..+...  .                 
T Consensus       187 ~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~  265 (367)
T 2fst_X          187 TGYVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNY  265 (367)
T ss_dssp             ----CCCTTCCHHHHTTC-CSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHH
T ss_pred             CCcCcCcCccChHHHcCC-cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHH
Confidence            346899999999998763 348899999999999999999999997654  222222110  0                 


Q ss_pred             ---CCCC--------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           75 ---LPPI--------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        75 ---~~~~--------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                         ....        ....+..+.+++.+||..||.+|++++++++||||....
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~  319 (367)
T 2fst_X          266 IQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH  319 (367)
T ss_dssp             HHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             HhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhcc
Confidence               0000        124577899999999999999999999999999998643

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.74  E-value=3.4e-18  Score=114.63  Aligned_cols=101  Identities=32%  Similarity=0.535  Sum_probs=73.5

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC---------CCCCCCH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP---------IPDSVSR   84 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~---------~~~~~~~   84 (133)
                      ....||+.|+|||.+... ..++.++|+||+|+++|++++|..||....  .............         .....+.
T Consensus       184 ~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (303)
T 2vwi_A          184 KTFVGTPCWMAPEVMEQV-RGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGK  262 (303)
T ss_dssp             ----CCCTTCCHHHHHHH-HCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCH
T ss_pred             cccCCCccccCHHHhccc-cCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhH
Confidence            345899999999998752 237899999999999999999999997643  2222222222211         1235678


Q ss_pred             HHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           85 DARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        85 ~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      .+.+++.+||..||.+||+++++++|+||.+..
T Consensus       263 ~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  295 (303)
T 2vwi_A          263 SFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK  295 (303)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHHTSTTC----
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhhChhhhcCC
Confidence            999999999999999999999999999998643

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.74  E-value=2.6e-18  Score=122.97  Aligned_cols=100  Identities=20%  Similarity=0.302  Sum_probs=81.8

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCC---CCCCCHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI---PDSVSRDARDFI   90 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~   90 (133)
                      ...+||+.|+|||++..   .++.++|+||+|+++|++++|..||.+..  ..+..+..+.....   +..++..+.+++
T Consensus       206 ~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li  282 (504)
T 3q5i_A          206 RDRLGTAYYIAPEVLKK---KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELI  282 (504)
T ss_dssp             CCCCSCTTTCCHHHHTT---CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHH
T ss_pred             ccccCCcCCCCHHHhcc---CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHH
Confidence            34589999999999874   38999999999999999999999998754  34445554443211   246789999999


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      ..||..||.+||+++++++|||+++...
T Consensus       283 ~~~L~~dp~~R~t~~e~l~h~~~~~~~~  310 (504)
T 3q5i_A          283 KLMLTYDYNKRCTAEEALNSRWIKKYAN  310 (504)
T ss_dssp             HHHTCSSTTTSCCHHHHHTSHHHHHTCC
T ss_pred             HHHcCCChhHCCCHHHHhcCHhhhhchh
Confidence            9999999999999999999999976544

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.74  E-value=3e-18  Score=116.15  Aligned_cols=101  Identities=30%  Similarity=0.547  Sum_probs=75.9

Q ss_pred             hccccccccccccccccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCC-CCCCCCCHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSK---NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELP-PIPDSVSRDARDF   89 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~---~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~   89 (133)
                      ....||+.|+|||.+...   ...++.++|+||+|+++|++++|..||....  .....+.....+ ......+..+.++
T Consensus       187 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  266 (326)
T 2x7f_A          187 NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSF  266 (326)
T ss_dssp             ----CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCSCSCHHHHHH
T ss_pred             ccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccccCCccccCHHHHHH
Confidence            345799999999998621   1347889999999999999999999997654  233333333322 2345678999999


Q ss_pred             HHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           90 ILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        90 ~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      +.+||..||.+||+++++++||||...
T Consensus       267 i~~~l~~dp~~Rps~~~ll~hp~~~~~  293 (326)
T 2x7f_A          267 IESCLVKNHSQRPATEQLMKHPFIRDQ  293 (326)
T ss_dssp             HHHHCCSSGGGSCCHHHHHTSHHHHCC
T ss_pred             HHHHhccChhhCCCHHHHhhChHHhhC
Confidence            999999999999999999999999764

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.74  E-value=1.5e-17  Score=114.05  Aligned_cols=100  Identities=31%  Similarity=0.386  Sum_probs=76.3

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh----------------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR----------------------   72 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~----------------------   72 (133)
                      ..+||+.|+|||.+... ..++.++|+||+|+++|++++|..||.+..  ..+..+..                      
T Consensus       182 ~~~~t~~y~aPE~~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  260 (353)
T 3coi_A          182 GYVVTRWYRAPEVILSW-MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYI  260 (353)
T ss_dssp             --CCSBCCSCHHHHSCC-SCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHH
T ss_pred             ccccCcCcCCHHHHhCc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHH
Confidence            45889999999998762 347899999999999999999999997643  12211111                      


Q ss_pred             -C-------CCCCCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           73 -G-------ELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        73 -~-------~~~~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                       .       .........+..+.+++.+||..||.+||+++++++||||....
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~  313 (353)
T 3coi_A          261 QSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR  313 (353)
T ss_dssp             HTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred             HhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhcc
Confidence             0       00112345688999999999999999999999999999998643

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.74  E-value=2.8e-18  Score=113.92  Aligned_cols=98  Identities=26%  Similarity=0.372  Sum_probs=79.3

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCC---CCCCHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIP---DSVSRDARDFI   90 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~   90 (133)
                      ....||+.|+|||.+.+   .++.++|+||+|+++|++++|..||....  .....+..+......   ...+..+.+++
T Consensus       166 ~~~~~t~~y~aPE~~~~---~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  242 (277)
T 3f3z_A          166 RTKVGTPYYVSPQVLEG---LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLI  242 (277)
T ss_dssp             CCCCSCTTTCCHHHHTT---CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHH
T ss_pred             hccCCCCCccChHHhcc---cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHH
Confidence            34589999999999865   27899999999999999999999997654  334444444332211   25788999999


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      .+|+..||.+||++.++++|+||++.
T Consensus       243 ~~~l~~dp~~R~s~~~~l~h~~~~~~  268 (277)
T 3f3z_A          243 RRLLTKSPKQRITSLQALEHEWFEKQ  268 (277)
T ss_dssp             HHHTCSSTTTSCCHHHHTTSHHHHHH
T ss_pred             HHHccCChhhCcCHHHHhcCHHHhcc
Confidence            99999999999999999999999754

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.74  E-value=4.7e-18  Score=119.74  Aligned_cols=100  Identities=17%  Similarity=0.251  Sum_probs=72.7

Q ss_pred             hccccccccccccccccC-CCCCCchhHHHHHHHHHHHHHh-CCCCCCChHH-HHHHHHhCCCCCC---CCCCCHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEW-ALFKIARGELPPI---PDSVSRDARDF   89 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~-~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~   89 (133)
                      ...+||+.|+|||++... ...++.++|+||+|+++|++++ |..||..... .............   .......+.++
T Consensus       184 ~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  263 (432)
T 3p23_A          184 SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIAREL  263 (432)
T ss_dssp             --CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHHHHHHHHH
T ss_pred             cccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCccccccHHHHHH
Confidence            346899999999999741 1346789999999999999999 8888865542 2222222221111   11223457899


Q ss_pred             HHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           90 ILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        90 ~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      +.+||..||.+||+++++++||||..
T Consensus       264 i~~~L~~dP~~Rps~~evl~hp~f~~  289 (432)
T 3p23_A          264 IEKMIAMDPQKRPSAKHVLKHPFFWS  289 (432)
T ss_dssp             HHHHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred             HHHHHhCCHhhCCCHHHHHhCccccC
Confidence            99999999999999999999999964

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.74  E-value=4.2e-18  Score=114.91  Aligned_cols=99  Identities=34%  Similarity=0.576  Sum_probs=79.5

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC--CCCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP--IPDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~   92 (133)
                      ...||+.|+|||.+..  ..++.++|+||+|+++|++++|..||....  .....+.......  .+...+..+.+++..
T Consensus       184 ~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  261 (314)
T 3com_A          184 TVIGTPFWMAPEVIQE--IGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQ  261 (314)
T ss_dssp             CCCSCGGGCCHHHHSS--SCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHH
T ss_pred             ccCCCCCccChhhcCC--CCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHH
Confidence            4588999999999987  448899999999999999999999997654  2233333333222  244568899999999


Q ss_pred             HcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           93 CLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      ||..||.+||+++++++|+||....
T Consensus       262 ~l~~dp~~Rpt~~~ll~~~~~~~~~  286 (314)
T 3com_A          262 CLVKSPEQRATATQLLQHPFVRSAK  286 (314)
T ss_dssp             HTCSCTTTSCCHHHHTTSHHHHTCC
T ss_pred             HccCChhhCcCHHHHHhCHHHhcCC
Confidence            9999999999999999999997643

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.74  E-value=3.5e-18  Score=120.62  Aligned_cols=100  Identities=23%  Similarity=0.397  Sum_probs=78.1

Q ss_pred             cccccccccccccccc---CCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh----CCCCCCCCCCCHHHH
Q 032788           17 WHVSRWNSLTDQVVNS---KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR----GELPPIPDSVSRDAR   87 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~---~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~----~~~~~~~~~~~~~~~   87 (133)
                      ..+||+.|+|||++..   ....|+.++|+||+|+++|+|++|..||.+.+  .....+..    ...+.....++..+.
T Consensus       235 ~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~  314 (437)
T 4aw2_A          235 VAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAK  314 (437)
T ss_dssp             SCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHH
T ss_pred             cccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCCHHHH
Confidence            3689999999999872   11448899999999999999999999998754  23333321    222333345899999


Q ss_pred             HHHHHHcccCCCC--CCCHHHHhhCCCCCCC
Q 032788           88 DFILKCLQVNPND--RPTAAQLMEHPFVKRP  116 (133)
Q Consensus        88 ~~~~~~l~~~p~~--R~s~~~~l~~~~~~~~  116 (133)
                      +++.+|+..++.+  |++++++++||||++.
T Consensus       315 dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i  345 (437)
T 4aw2_A          315 DLIRRLICSREHRLGQNGIEDFKKHPFFSGI  345 (437)
T ss_dssp             HHHHTTSSCGGGCTTTTTTHHHHTSGGGTTC
T ss_pred             HHHHHHhcccccccCCCCHHHHhCCCccCCC
Confidence            9999999887777  9999999999999864

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.74  E-value=1e-17  Score=117.99  Aligned_cols=99  Identities=21%  Similarity=0.290  Sum_probs=71.9

Q ss_pred             ccccccccccccccccC-----CCCCCchhHHHHHHHHHHHHHh-CCCCCCChHHHHHHHHhCCCC-CCC-----CCCCH
Q 032788           17 WHVSRWNSLTDQVVNSK-----NGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFKIARGELP-PIP-----DSVSR   84 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~-----~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~-~~~-----~~~~~   84 (133)
                      ..+||+.|+|||++.+.     ...++.++|+||+|+++|++++ |..||.........+..+... ...     ..++.
T Consensus       191 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  270 (434)
T 2rio_A          191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIA  270 (434)
T ss_dssp             ----CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHHHHHTCCCCCCCTTCCCHHHHH
T ss_pred             CCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHHHhcCCCCcccccccccccchH
Confidence            45899999999998651     1347899999999999999998 899997654222222222221 111     12346


Q ss_pred             HHHHHHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           85 DARDFILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        85 ~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      .+.+++.+||..||.+||++.++++||||..
T Consensus       271 ~~~~li~~~L~~dP~~Rps~~eil~hp~f~~  301 (434)
T 2rio_A          271 EATDLISQMIDHDPLKRPTAMKVLRHPLFWP  301 (434)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred             HHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence            7899999999999999999999999999964

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.74  E-value=6.3e-19  Score=121.74  Aligned_cols=99  Identities=11%  Similarity=0.102  Sum_probs=75.1

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHHH----HH---HH---hCCCCCCCCCCCHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWAL----FK---IA---RGELPPIPDSVSRDA   86 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~----~~---~~---~~~~~~~~~~~~~~~   86 (133)
                      ...||+.|+|||.+......++.++|+||+|+++|++++|..||.+.....    ..   ..   .....+....++..+
T Consensus       250 ~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (371)
T 3q60_A          250 ASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFV  329 (371)
T ss_dssp             GGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHH
T ss_pred             CccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHH
Confidence            346679999999997522348999999999999999999999997652110    00   00   011111224678999


Q ss_pred             HHHHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           87 RDFILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        87 ~~~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      .+++.+||..||.+||+++++++||||+.
T Consensus       330 ~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  358 (371)
T 3q60_A          330 KTLIGRFLNFDRRRRLLPLEAMETPEFLQ  358 (371)
T ss_dssp             HHHHHHHTCSSTTTCCCHHHHTTSHHHHH
T ss_pred             HHHHHHHcCCChhhCCCHHHHhcCHHHHH
Confidence            99999999999999999999999999864

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.73  E-value=5.4e-18  Score=118.83  Aligned_cols=99  Identities=28%  Similarity=0.470  Sum_probs=75.6

Q ss_pred             ccccccccccccccccC-----CCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh----CCCCCCCCCCCHH
Q 032788           17 WHVSRWNSLTDQVVNSK-----NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR----GELPPIPDSVSRD   85 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~-----~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~----~~~~~~~~~~~~~   85 (133)
                      ..+||+.|+|||++...     ...|+.++|+||+|+++|+|++|..||.+.+  .....+..    ...+..+..++.+
T Consensus       222 ~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~  301 (412)
T 2vd5_A          222 VAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEE  301 (412)
T ss_dssp             SCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----CCCHH
T ss_pred             eeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccccCCCHH
Confidence            45999999999998731     1347899999999999999999999997654  22233321    2222334578999


Q ss_pred             HHHHHHHHcccCCCCC---CCHHHHhhCCCCCCC
Q 032788           86 ARDFILKCLQVNPNDR---PTAAQLMEHPFVKRP  116 (133)
Q Consensus        86 ~~~~~~~~l~~~p~~R---~s~~~~l~~~~~~~~  116 (133)
                      +.+++.+||. +|.+|   ++++++++||||+..
T Consensus       302 ~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i  334 (412)
T 2vd5_A          302 ARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGL  334 (412)
T ss_dssp             HHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTC
T ss_pred             HHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCC
Confidence            9999999998 89888   599999999999864

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.73  E-value=7.4e-18  Score=113.73  Aligned_cols=99  Identities=28%  Similarity=0.525  Sum_probs=74.8

Q ss_pred             cccccccccccccccc---CCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhCCCCCCC--CCCCHHHHH
Q 032788           17 WHVSRWNSLTDQVVNS---KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELPPIP--DSVSRDARD   88 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~---~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~   88 (133)
                      ...||+.|+|||.+..   ....++.++|+||+|+++|++++|..||....   .....+........+  ..++..+.+
T Consensus       183 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  262 (318)
T 2dyl_A          183 RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQS  262 (318)
T ss_dssp             ----CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHH
T ss_pred             ccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHH
Confidence            4579999999999852   11347889999999999999999999997632   334444444443333  357899999


Q ss_pred             HHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           89 FILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        89 ~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      ++..||..||.+||+++++++|+||..
T Consensus       263 li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (318)
T 2dyl_A          263 FVKDCLTKDHRKRPKYNKLLEHSFIKR  289 (318)
T ss_dssp             HHHHHTCSCTTTSCCHHHHTTSHHHHH
T ss_pred             HHHHHccCChhHCcCHHHHhhCHHHHh
Confidence            999999999999999999999999864

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.73  E-value=5.2e-18  Score=115.07  Aligned_cols=96  Identities=24%  Similarity=0.357  Sum_probs=78.5

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHccc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV   96 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   96 (133)
                      ...||+.|+|||.+... ..++.++|+||+|+++|++++|..||.......    .. ....+..++..+.+++.+||..
T Consensus       207 ~~~gt~~y~aPE~~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~----~~-~~~~~~~~~~~~~~li~~~l~~  280 (320)
T 3a99_A          207 DFDGTRVYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII----RG-QVFFRQRVSSECQHLIRWCLAL  280 (320)
T ss_dssp             CCCSCGGGSCHHHHHHS-CBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH----HC-CCCCSSCCCHHHHHHHHHHTCS
T ss_pred             CCCCCccCCChHHhccC-CCCCccchHHhHHHHHHHHHHCCCCCCChhhhh----cc-cccccccCCHHHHHHHHHHccC
Confidence            35799999999998763 223678999999999999999999997755322    12 2234567889999999999999


Q ss_pred             CCCCCCCHHHHhhCCCCCCCCC
Q 032788           97 NPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        97 ~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      ||.+||+++++++||||.....
T Consensus       281 dp~~Rps~~~ll~hp~~~~~~~  302 (320)
T 3a99_A          281 RPSDRPTFEEIQNHPWMQDVLL  302 (320)
T ss_dssp             SGGGSCCHHHHHTSGGGSSCCC
T ss_pred             ChhhCcCHHHHhcCHhhcCccC
Confidence            9999999999999999987543

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.73  E-value=9.7e-18  Score=112.31  Aligned_cols=104  Identities=24%  Similarity=0.423  Sum_probs=79.4

Q ss_pred             cccccccccccccccc----CCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC---CCCCCCHHHH
Q 032788           17 WHVSRWNSLTDQVVNS----KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP---IPDSVSRDAR   87 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~----~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~   87 (133)
                      ..+|++.|+|||.+..    ....++.++|+||+|+++|++++|..||....  .....+..+....   .....+..+.
T Consensus       182 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  261 (298)
T 1phk_A          182 EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK  261 (298)
T ss_dssp             CCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHH
T ss_pred             cccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcccccccCHHHH
Confidence            4579999999999852    11347889999999999999999999997654  2333333333221   1235788999


Q ss_pred             HHHHHHcccCCCCCCCHHHHhhCCCCCCCCCCC
Q 032788           88 DFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS  120 (133)
Q Consensus        88 ~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~~~  120 (133)
                      +++.+||..||.+||+++++++||||.+.....
T Consensus       262 ~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~~  294 (298)
T 1phk_A          262 DLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEE  294 (298)
T ss_dssp             HHHHHHCCSSGGGSCCHHHHTTSGGGCTTC---
T ss_pred             HHHHHHccCCcccCCCHHHHHhChHhhhccchh
Confidence            999999999999999999999999998765543

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.73  E-value=1.2e-17  Score=113.27  Aligned_cols=99  Identities=26%  Similarity=0.364  Sum_probs=77.5

Q ss_pred             cccccccccccccccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhCCCCCC---CCCCCHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNS-KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELPPI---PDSVSRDARDF   89 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~-~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~   89 (133)
                      ..+||+.|+|||.+.. ....++.++|+||+|+++|++++|..||....   .....+..+.....   +...+..+.++
T Consensus       175 ~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  254 (322)
T 2ycf_A          175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDL  254 (322)
T ss_dssp             HHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHH
T ss_pred             cccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHH
Confidence            4579999999999752 11457899999999999999999999997643   22223333333222   24678899999


Q ss_pred             HHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           90 ILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        90 ~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      +.+||..||.+||+++++++|+||..
T Consensus       255 i~~~l~~dP~~Rps~~~~l~h~~~~~  280 (322)
T 2ycf_A          255 VKKLLVVDPKARFTTEEALRHPWLQD  280 (322)
T ss_dssp             HHHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred             HHHHcccCHhhCCCHHHHhhCcCcCC
Confidence            99999999999999999999999974

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.73  E-value=6.2e-18  Score=114.79  Aligned_cols=102  Identities=26%  Similarity=0.406  Sum_probs=75.7

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHH-------------HhCCC----
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKI-------------ARGEL----   75 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~-------------~~~~~----   75 (133)
                      ...+|+..|+|||.+... ..++.++|+||+|+++|++++|..||....   ..+..+             .....    
T Consensus       188 ~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  266 (330)
T 3nsz_A          188 NVRVASRYFKGPELLVDY-QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP  266 (330)
T ss_dssp             CSCCSCGGGCCHHHHTTC-CCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCT
T ss_pred             ccccccccccChhhhcCC-CcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcccccc
Confidence            345899999999998762 348999999999999999999999985321   111111             11100    


Q ss_pred             -------------------CCCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           76 -------------------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        76 -------------------~~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                                         ...+..++..+.+++.+||..||.+||+++|+++||||.....
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~  328 (330)
T 3nsz_A          267 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK  328 (330)
T ss_dssp             HHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC-
T ss_pred             chhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhcc
Confidence                               0011226889999999999999999999999999999987543

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.73  E-value=1.8e-17  Score=111.85  Aligned_cols=95  Identities=22%  Similarity=0.360  Sum_probs=76.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHccc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV   96 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   96 (133)
                      ...|+..|+|||.+... ...+.++|+||+|+++|++++|..||........     .....+..++..+.+++.+||..
T Consensus       197 ~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~  270 (312)
T 2iwi_A          197 DFDGTRVYSPPEWISRH-QYHALPATVWSLGILLYDMVCGDIPFERDQEILE-----AELHFPAHVSPDCCALIRRCLAP  270 (312)
T ss_dssp             CCCSCTTTSCHHHHHHS-CBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHH-----TCCCCCTTSCHHHHHHHHHHTCS
T ss_pred             ccCCcccccCceeeecC-CCCCccchHHHHHHHHHHHHHCCCCCCChHHHhh-----hccCCcccCCHHHHHHHHHHccC
Confidence            45789999999998763 2234589999999999999999999977553221     22345667899999999999999


Q ss_pred             CCCCCCCHHHHhhCCCCCCCC
Q 032788           97 NPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        97 ~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      ||.+||+++++++|+||....
T Consensus       271 ~p~~Rps~~e~l~~~~~~~~~  291 (312)
T 2iwi_A          271 KPSSRPSLEEILLDPWMQTPA  291 (312)
T ss_dssp             STTTSCCHHHHHHSTTTCC--
T ss_pred             ChhhCcCHHHHhcChhhcCch
Confidence            999999999999999998643

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.73  E-value=1.1e-17  Score=113.39  Aligned_cols=97  Identities=22%  Similarity=0.403  Sum_probs=75.8

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..+++.|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+...+..+.+++.+||
T Consensus       199 ~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  276 (323)
T 3qup_A          199 SKLPVKWLALESLAD--NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCW  276 (323)
T ss_dssp             --CCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHTT
T ss_pred             ccCcccccCchhhcC--CCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCCCCCCCccCHHHHHHHHHHc
Confidence            356778999999987  458999999999999999999 899997654  444555555556667788999999999999


Q ss_pred             ccCCCCCCC-------HHHHhhCCCCCCC
Q 032788           95 QVNPNDRPT-------AAQLMEHPFVKRP  116 (133)
Q Consensus        95 ~~~p~~R~s-------~~~~l~~~~~~~~  116 (133)
                      ..||.+||+       +++++.|+|+...
T Consensus       277 ~~dp~~Rps~~~l~~~l~~~l~~~~~~~~  305 (323)
T 3qup_A          277 SADPKQRPSFTCLRMELENILGHLSVLST  305 (323)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHHHC------
T ss_pred             cCChhhCcCHHHHHHHHHHHHHHhhhcCC
Confidence            999999999       7888899999764

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.73  E-value=1.6e-18  Score=118.05  Aligned_cols=99  Identities=28%  Similarity=0.494  Sum_probs=74.9

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh--CC-----------------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR--GE-----------------   74 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~--~~-----------------   74 (133)
                      ...+||+.|+|||.+... ..++.++|+||+|+++|++++|..||.+..  .....+..  +.                 
T Consensus       182 ~~~~~t~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (331)
T 4aaa_A          182 DDEVATRWYRAPELLVGD-VKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAG  260 (331)
T ss_dssp             --CCCCCTTCCHHHHTTC-TTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTT
T ss_pred             CCCcCCccccCcccccCC-CCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccccc
Confidence            345899999999999763 357899999999999999999999997653  22211111  00                 


Q ss_pred             -C-CCC---------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           75 -L-PPI---------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        75 -~-~~~---------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                       . +..         ...++..+.+++.+||..||.+||+++|+++||||+.
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~  312 (331)
T 4aaa_A          261 VRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQM  312 (331)
T ss_dssp             CCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHG
T ss_pred             ccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhcc
Confidence             0 000         1246788999999999999999999999999999964

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.73  E-value=1.5e-18  Score=118.51  Aligned_cols=100  Identities=24%  Similarity=0.404  Sum_probs=60.2

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHH------HHHHHhC---CCCCCCCCCCHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA------LFKIARG---ELPPIPDSVSRDA   86 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~------~~~~~~~---~~~~~~~~~~~~~   86 (133)
                      ...+||+.|+|||.+..  ..++.++|+||+|+++|++++|..||......      ...+...   ........++..+
T Consensus       187 ~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (336)
T 3fhr_A          187 QTPCYTPYYVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDA  264 (336)
T ss_dssp             -------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHHH
T ss_pred             ccCCCCcCccChhhhCC--CCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHH
Confidence            34588999999999976  44889999999999999999999999664311      1111111   1112234678999


Q ss_pred             HHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           87 RDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        87 ~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      .+++.+||..||.+||+++++++||||....
T Consensus       265 ~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  295 (336)
T 3fhr_A          265 KQLIRLLLKTDPTERLTITQFMNHPWINQSM  295 (336)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHHSHHHHTGG
T ss_pred             HHHHHHHCCCChhHCcCHHHHhcCccccccc
Confidence            9999999999999999999999999997643

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.72  E-value=6.7e-18  Score=116.04  Aligned_cols=100  Identities=27%  Similarity=0.411  Sum_probs=73.5

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh---------------------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR---------------------   72 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~---------------------   72 (133)
                      ...+||+.|+|||.+... ..++.++|+||+|+++|++++|..||.+..  ..+..+..                     
T Consensus       191 ~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  269 (362)
T 3pg1_A          191 THYVTHRWYRAPELVMQF-KGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDY  269 (362)
T ss_dssp             -----CGGGCCHHHHTTC-TTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHH
T ss_pred             ceecccceecCcHHhcCC-CCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHH
Confidence            345899999999998762 348999999999999999999999997643  22222111                     


Q ss_pred             --CCCCCC--------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           73 --GELPPI--------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        73 --~~~~~~--------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                        ......        ....+..+.+++.+||..||.+||+++++++||||+..
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  323 (362)
T 3pg1_A          270 LRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESL  323 (362)
T ss_dssp             TTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             HHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhc
Confidence              000011        22457789999999999999999999999999999875

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.72  E-value=1.4e-17  Score=109.90  Aligned_cols=102  Identities=18%  Similarity=0.309  Sum_probs=78.5

Q ss_pred             chhhhhhhhccccccccccccccccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCChH--HH-HHHHHhCCCCCCCCCCC
Q 032788            8 GLGNALRRKWHVSRWNSLTDQVVNSKN-GGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WA-LFKIARGELPPIPDSVS   83 (133)
Q Consensus         8 ~~~~~~~~~~~~gt~~~~aPE~~~~~~-~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~-~~~~~~~~~~~~~~~~~   83 (133)
                      +++.........||+.|+|||.+.... ..++.++|+||+|+++|++++|..||.+..  .. .........+..+..++
T Consensus       158 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (271)
T 3kmu_A          158 DVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGIS  237 (271)
T ss_dssp             GSCCTTSCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCC
T ss_pred             cceeeecccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCC
Confidence            334444445668999999999998631 123348999999999999999999997654  22 22333445556677899


Q ss_pred             HHHHHHHHHHcccCCCCCCCHHHHhh
Q 032788           84 RDARDFILKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        84 ~~~~~~~~~~l~~~p~~R~s~~~~l~  109 (133)
                      ..+.+++..||..||.+||+++++++
T Consensus       238 ~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          238 PHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999999999875

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.72  E-value=1.2e-17  Score=111.15  Aligned_cols=98  Identities=30%  Similarity=0.415  Sum_probs=76.9

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC---CCCCCCHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP---IPDSVSRDARDFI   90 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~   90 (133)
                      ....|++.|+|||.+..  ..++.++|+||+|+++|++++|..||.+..  .....+.......   .....+..+.+++
T Consensus       169 ~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  246 (283)
T 3bhy_A          169 KNIFGTPEFVAPEIVNY--EPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFI  246 (283)
T ss_dssp             ---CCCGGGCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHH
T ss_pred             cccCCCcCccCcceecC--CCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHHHHHHH
Confidence            34579999999999987  458999999999999999999999997654  2333333322211   1245788899999


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      .+||..||.+||+++++++|+||+.
T Consensus       247 ~~~l~~dp~~Rps~~~~l~h~~~~~  271 (283)
T 3bhy_A          247 RRLLVKDPKRRMTIAQSLEHSWIKA  271 (283)
T ss_dssp             HTTSCSSGGGSCCHHHHHHCHHHHH
T ss_pred             HHHccCCHhHCcCHHHHHhCHHHHH
Confidence            9999999999999999999999964

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.72  E-value=4.3e-18  Score=114.81  Aligned_cols=99  Identities=26%  Similarity=0.389  Sum_probs=76.2

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC-------------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL-------------------   75 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~-------------------   75 (133)
                      ...||..|+|||.+... ..++.++|+||+|+++|++++|..||.+..  .....+.....                   
T Consensus       183 ~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (320)
T 2i6l_A          183 EGLVTKWYRSPRLLLSP-NNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIR  261 (320)
T ss_dssp             GGGSCCTTCCHHHHHCT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHH
T ss_pred             cccccccccCcHHhcCc-ccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCccccc
Confidence            34678899999988652 348999999999999999999999997653  22222211110                   


Q ss_pred             -----CC-----CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           76 -----PP-----IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        76 -----~~-----~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                           +.     ....++..+.+++.+||..||.+||+++++++||||+..
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  312 (320)
T 2i6l_A          262 NDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIY  312 (320)
T ss_dssp             HHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTT
T ss_pred             ccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccc
Confidence                 00     123578899999999999999999999999999999864

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.71  E-value=4e-18  Score=115.71  Aligned_cols=98  Identities=23%  Similarity=0.487  Sum_probs=60.0

Q ss_pred             ccccccccccccccc--CCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHHHHHH---HhCCCCCC----CCCCCHHHHH
Q 032788           18 HVSRWNSLTDQVVNS--KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI---ARGELPPI----PDSVSRDARD   88 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~--~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~   88 (133)
                      ..||+.|+|||.+..  ....++.++|+||+|+++|++++|..||..........   ..+..+..    ....+..+.+
T Consensus       185 ~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  264 (327)
T 3aln_A          185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFIN  264 (327)
T ss_dssp             ---------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHH
T ss_pred             CCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHH
Confidence            479999999999842  11347899999999999999999999997654222211   11222222    2357889999


Q ss_pred             HHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           89 FILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        89 ~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      ++..||..||.+||++.++++||||..
T Consensus       265 li~~~l~~dp~~Rps~~ell~hp~~~~  291 (327)
T 3aln_A          265 FVNLCLTKDESKRPKYKELLKHPFILM  291 (327)
T ss_dssp             HHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             HHHHHhhCChhhCcCHHHHHhChHHHH
Confidence            999999999999999999999999963

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.71  E-value=2.8e-17  Score=109.98  Aligned_cols=97  Identities=21%  Similarity=0.319  Sum_probs=69.4

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhCC---CCCCCCCCCHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGE---LPPIPDSVSRDARDF   89 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~   89 (133)
                      ...+||+.|+|||.+... ..++.++|+||+|+++|++++   ||....   .....+....   ....+...+..+.++
T Consensus       188 ~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  263 (303)
T 1zy4_A          188 TSAIGTAMYVATEVLDGT-GHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKI  263 (303)
T ss_dssp             ------CTTSCHHHHTSC-SCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHH
T ss_pred             ccCCCcccccCcccccCC-CCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhccccccccCccccccchHHHHHH
Confidence            456899999999999753 358899999999999999997   454332   2222332221   122344567789999


Q ss_pred             HHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           90 ILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        90 ~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      +.+||..||.+||+++++++||||...
T Consensus       264 i~~~l~~dp~~Rps~~~ll~h~~~~~~  290 (303)
T 1zy4_A          264 IRLLIDHDPNKRPGARTLLNSGWLPVK  290 (303)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred             HHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence            999999999999999999999999754

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.71  E-value=2.5e-17  Score=113.79  Aligned_cols=94  Identities=20%  Similarity=0.302  Sum_probs=79.5

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..||+.|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+..++..+.+++..||
T Consensus       246 ~~~t~~y~aPE~~~~--~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l  323 (367)
T 3l9p_A          246 AMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCW  323 (367)
T ss_dssp             GGSCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             cCCcccEECHHHhcC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHc
Confidence            477889999999987  458999999999999999998 999997654  344555555556667788999999999999


Q ss_pred             ccCCCCCCCHHHHhhCCCC
Q 032788           95 QVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~~~~  113 (133)
                      ..+|.+||++.+++++.+.
T Consensus       324 ~~dP~~Rps~~eil~~l~~  342 (367)
T 3l9p_A          324 QHQPEDRPNFAIILERIEY  342 (367)
T ss_dssp             CSSGGGSCCHHHHHHHHHH
T ss_pred             CCCHhHCcCHHHHHHHHHH
Confidence            9999999999999987654

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.71  E-value=4.6e-17  Score=110.06  Aligned_cols=92  Identities=18%  Similarity=0.287  Sum_probs=73.0

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHH-HhCCCCCCCCCCCHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKI-ARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ...+||+.|+|||.+..  ..++.++|+||+|+++|++++|..||.+..  .....+ ........+..++..+.+++.+
T Consensus       197 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  274 (309)
T 3p86_A          197 KSAAGTPEWMAPEVLRD--EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEG  274 (309)
T ss_dssp             -----CCTTSCHHHHTT--CCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHH
T ss_pred             ccCCCCccccChhhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHH
Confidence            34689999999999987  448999999999999999999999998754  222222 2344456677889999999999


Q ss_pred             HcccCCCCCCCHHHHhh
Q 032788           93 CLQVNPNDRPTAAQLME  109 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~  109 (133)
                      ||..+|.+||+++++++
T Consensus       275 ~l~~dP~~Rps~~~ll~  291 (309)
T 3p86_A          275 CWTNEPWKRPSFATIMD  291 (309)
T ss_dssp             HTCSSGGGSCCHHHHHH
T ss_pred             HccCChhhCcCHHHHHH
Confidence            99999999999999987

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.70  E-value=4.5e-18  Score=114.95  Aligned_cols=94  Identities=20%  Similarity=0.209  Sum_probs=63.9

Q ss_pred             ccccccccccccccccCC----CCCCchhHHHHHHHHHHHHHhCCCCCCC----------h------HHHHHHH-H-hCC
Q 032788           17 WHVSRWNSLTDQVVNSKN----GGYGLPADIWSVGCTVLEMLTRCRPYFG----------V------EWALFKI-A-RGE   74 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~----~~~~~~~diws~g~~~~~l~~~~~p~~~----------~------~~~~~~~-~-~~~   74 (133)
                      ..+||+.|+|||++.+..    ..++.++||||+||++||+++|..|+..          .      ....... . ...
T Consensus       171 ~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  250 (303)
T 3hmm_A          171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKL  250 (303)
T ss_dssp             ---CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCC
T ss_pred             cccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccC
Confidence            358999999999997521    1256799999999999999998765432          1      0122222 1 223


Q ss_pred             CCCCCCC-----CCHHHHHHHHHHcccCCCCCCCHHHHhhC
Q 032788           75 LPPIPDS-----VSRDARDFILKCLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        75 ~~~~~~~-----~~~~~~~~~~~~l~~~p~~R~s~~~~l~~  110 (133)
                      .+..|..     ....+.+++.+||..||.+|||+.|+++.
T Consensus       251 rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  291 (303)
T 3hmm_A          251 RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             CCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             CCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            3333332     22467899999999999999999998763

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.70  E-value=2.1e-18  Score=119.35  Aligned_cols=94  Identities=16%  Similarity=0.095  Sum_probs=72.3

Q ss_pred             hccccccccccccccccC---------CCCCCchhHHHHHHHHHHHHHhCCCCCCChHHH--HHHHHhCCCCCCCCCCCH
Q 032788           16 KWHVSRWNSLTDQVVNSK---------NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA--LFKIARGELPPIPDSVSR   84 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~---------~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~   84 (133)
                      ...+| +.|+|||.+...         ...++.++|+||+|+++|++++|..||.+....  ...+.     .....++.
T Consensus       261 ~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~~-----~~~~~~~~  334 (377)
T 3byv_A          261 VSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIF-----RSCKNIPQ  334 (377)
T ss_dssp             ECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGGG-----SSCCCCCH
T ss_pred             cCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhhh-----hhccCCCH
Confidence            34578 999999999863         004899999999999999999999999764311  11111     12346789


Q ss_pred             HHHHHHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           85 DARDFILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        85 ~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      .+.+++.+||..||.+||++.++++||||+.
T Consensus       335 ~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~  365 (377)
T 3byv_A          335 PVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  365 (377)
T ss_dssp             HHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred             HHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence            9999999999999999999999999999864

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.70  E-value=2.4e-17  Score=110.04  Aligned_cols=96  Identities=27%  Similarity=0.517  Sum_probs=77.7

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCC-CC--CCCCCHHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELP-PI--PDSVSRDARDFILK   92 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~   92 (133)
                      ..||+.|+|||.+.+   .++.++|+||+|+++|++++|..||.+..  .....+..+... ..  ...++..+.+++.+
T Consensus       183 ~~~~~~y~aPE~~~~---~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  259 (287)
T 2wei_A          183 RIGTAYYIAPEVLRG---TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRK  259 (287)
T ss_dssp             HHHHHTTCCHHHHTT---CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHH
T ss_pred             ccCcccccChHHhcC---CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHH
Confidence            368899999999875   37899999999999999999999997654  333444444332 11  24678999999999


Q ss_pred             HcccCCCCCCCHHHHhhCCCCCCC
Q 032788           93 CLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      ||..||.+||+++++++||||++.
T Consensus       260 ~l~~dp~~Rps~~ell~hp~~~~~  283 (287)
T 2wei_A          260 MLTFHPSLRITATQCLEHPWIQKY  283 (287)
T ss_dssp             HTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred             HcccChhhCcCHHHHhcCHHHhcc
Confidence            999999999999999999999754

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.70  E-value=3.1e-17  Score=112.46  Aligned_cols=92  Identities=24%  Similarity=0.436  Sum_probs=77.5

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH---HHHHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE---WALFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ...||+.|+|||.+..  ..++.++||||+|+++|++++ |..||.+..   .....+..+.....+...+..+.+++..
T Consensus       254 ~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  331 (359)
T 3vhe_A          254 DARLPLKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD  331 (359)
T ss_dssp             -CEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHH
T ss_pred             ccCCCceeEChhhhcC--CCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHHH
Confidence            3578889999999987  458999999999999999998 999997643   3344555566666778889999999999


Q ss_pred             HcccCCCCCCCHHHHhhC
Q 032788           93 CLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~  110 (133)
                      ||..||.+||+++++++|
T Consensus       332 ~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          332 CWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             HTCSSGGGSCCHHHHHHH
T ss_pred             HccCChhhCCCHHHHHHH
Confidence            999999999999999876

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.70  E-value=4.6e-17  Score=112.60  Aligned_cols=91  Identities=22%  Similarity=0.362  Sum_probs=77.1

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..||+.|+|||++..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+..++..+.+++..||
T Consensus       265 ~~~t~~y~aPE~~~~--~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  342 (370)
T 2psq_A          265 GRLPVKWMAPEALFD--RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCW  342 (370)
T ss_dssp             TTSCGGGCCHHHHHT--CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTSCHHHHHHHHHHT
T ss_pred             CCcccceECHhHhcC--CCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHc
Confidence            467788999999987  458999999999999999998 999997654  444555566666677888999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032788           95 QVNPNDRPTAAQLMEH  110 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~  110 (133)
                      ..+|.+||++++++++
T Consensus       343 ~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          343 HAVPSQRPTFKQLVED  358 (370)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             CCChhhCcCHHHHHHH
Confidence            9999999999998864

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.70  E-value=8.2e-17  Score=107.36  Aligned_cols=93  Identities=18%  Similarity=0.316  Sum_probs=74.5

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH----HHHHH-HHhCCCCCCCCCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFK-IARGELPPIPDSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~   91 (133)
                      ...||+.|+|||.+......++.++|+||+|+++|++++|..||....    ..... .........+..++..+.+++.
T Consensus       185 ~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  264 (287)
T 4f0f_A          185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIE  264 (287)
T ss_dssp             CCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHH
T ss_pred             ccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHH
Confidence            458999999999995432447889999999999999999999997643    11222 2334445567788999999999


Q ss_pred             HHcccCCCCCCCHHHHhh
Q 032788           92 KCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~  109 (133)
                      .||..||.+||+++++++
T Consensus       265 ~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          265 LCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             HHTCSSGGGSCCHHHHHH
T ss_pred             HHhcCChhhCcCHHHHHH
Confidence            999999999999999875

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.69  E-value=5.3e-17  Score=107.39  Aligned_cols=92  Identities=18%  Similarity=0.457  Sum_probs=73.6

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHH-HhCCCCCCCCCCCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKI-ARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...||+.|+|||.+..  ..++.++|+||+|+++|++++|..||.+..  ...... ........+...+..+.+++.+|
T Consensus       173 ~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  250 (271)
T 3dtc_A          173 SAAGAYAWMAPEVIRA--SMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDC  250 (271)
T ss_dssp             ---CCGGGSCHHHHHH--CCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHH
T ss_pred             CCCCccceeCHHHhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHH
Confidence            4589999999999987  458999999999999999999999998754  222222 23333455677889999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032788           94 LQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~  110 (133)
                      |..||.+||++++++++
T Consensus       251 l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          251 WNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             hcCCcccCcCHHHHHHH
Confidence            99999999999999874

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.69  E-value=1.7e-17  Score=111.99  Aligned_cols=97  Identities=24%  Similarity=0.372  Sum_probs=74.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC---CCCCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP---IPDSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~   91 (133)
                      ..+||+.|+|||.+.+  ..++.++|+||+|+++|++++|..||.+..  .............   ....++..+.+++.
T Consensus       178 ~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  255 (311)
T 3ork_A          178 AVIGTAQYLSPEQARG--DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVL  255 (311)
T ss_dssp             ----CCTTCCHHHHHT--CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHH
T ss_pred             ccCcCcccCCHHHhcC--CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHH
Confidence            4579999999999987  458999999999999999999999998754  2222222222211   13457899999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      +||..||.+|++..+++.|+|++.
T Consensus       256 ~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          256 KALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             HHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             HHHhcCHhhChhhHHHHHHHHHHH
Confidence            999999999999999999998863

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.68  E-value=7.4e-17  Score=109.69  Aligned_cols=91  Identities=24%  Similarity=0.406  Sum_probs=75.6

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..||..|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+...+..+.+++.+||
T Consensus       179 ~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  256 (327)
T 3poz_A          179 GKVPIKWMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW  256 (327)
T ss_dssp             -CCCGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHHHHHHHHT
T ss_pred             CCccccccChHHhcc--CCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHc
Confidence            366789999999987  458999999999999999999 999997654  333444455555667778999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032788           95 QVNPNDRPTAAQLMEH  110 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~  110 (133)
                      ..+|.+||++.+++++
T Consensus       257 ~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          257 MIDADSRPKFRELIIE  272 (327)
T ss_dssp             CSCGGGSCCHHHHHHH
T ss_pred             CCChhhCCCHHHHHHH
Confidence            9999999999998865

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.68  E-value=1.2e-16  Score=105.70  Aligned_cols=92  Identities=21%  Similarity=0.302  Sum_probs=76.8

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...||+.|+|||.+..  ..++.++|+||+|+++|++++ |..||....  .....+..+.....+...+..+.+++..|
T Consensus       166 ~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  243 (269)
T 4hcu_A          166 GTKFPVKWASPEVFSF--SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHC  243 (269)
T ss_dssp             STTCCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHH
T ss_pred             CcccccccCCHHHhcC--CCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCCCCcCCHHHHHHHHHH
Confidence            3467778999999987  458999999999999999999 899997654  34445555555566777899999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032788           94 LQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~  110 (133)
                      |..+|.+||++++++++
T Consensus       244 l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          244 WRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             ccCCcccCcCHHHHHHH
Confidence            99999999999999875

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.68  E-value=1.5e-16  Score=107.28  Aligned_cols=91  Identities=18%  Similarity=0.460  Sum_probs=73.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH----HHHHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ...||+.|+|||.+..  ..++.++|+||+|+++|++++|..||....    ........+..+..+..++..+.+++.+
T Consensus       162 ~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  239 (307)
T 2eva_A          162 NNKGSAAWMAPEVFEG--SNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTR  239 (307)
T ss_dssp             ---CCTTSSCHHHHTC--CCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHH
T ss_pred             cCCCCCceEChhhhCC--CCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHH
Confidence            4579999999999987  458999999999999999999999997532    2233344455556667789999999999


Q ss_pred             HcccCCCCCCCHHHHhh
Q 032788           93 CLQVNPNDRPTAAQLME  109 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~  109 (133)
                      ||..||.+||+++++++
T Consensus       240 ~l~~dp~~Rps~~ell~  256 (307)
T 2eva_A          240 CWSKDPSQRPSMEEIVK  256 (307)
T ss_dssp             HTCSSGGGSCCHHHHHH
T ss_pred             HhcCChhhCcCHHHHHH
Confidence            99999999999999876

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.68  E-value=6.8e-17  Score=109.71  Aligned_cols=94  Identities=20%  Similarity=0.302  Sum_probs=78.7

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..||+.|+|||.+..  ..++.++|+||+|+++|++++ |..||....  .....+..+.....+..++..+.+++..||
T Consensus       205 ~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  282 (327)
T 2yfx_A          205 AMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCW  282 (327)
T ss_dssp             GGSCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             cCCCcceeCHhHhcC--CCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHh
Confidence            467889999999987  458999999999999999998 888987654  344445555555667788999999999999


Q ss_pred             ccCCCCCCCHHHHhhCCCC
Q 032788           95 QVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~~~~  113 (133)
                      ..||.+||++.+++++.+.
T Consensus       283 ~~dp~~Rps~~~ll~~l~~  301 (327)
T 2yfx_A          283 QHQPEDRPNFAIILERIEY  301 (327)
T ss_dssp             CSSGGGSCCHHHHHHHHHH
T ss_pred             cCChhhCcCHHHHHHHHHH
Confidence            9999999999999998765

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.67  E-value=1.2e-16  Score=106.35  Aligned_cols=91  Identities=22%  Similarity=0.444  Sum_probs=74.8

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..+++.|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+..++..+.+++..||
T Consensus       177 ~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l  254 (281)
T 1mp8_A          177 GKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCW  254 (281)
T ss_dssp             --CCGGGCCHHHHHH--CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             CCCcccccChhhccc--CCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHc
Confidence            356778999999987  458999999999999999986 889997653  444555555556677788999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032788           95 QVNPNDRPTAAQLMEH  110 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~  110 (133)
                      ..||.+||++.+++++
T Consensus       255 ~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          255 AYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             cCChhhCcCHHHHHHH
Confidence            9999999999998764

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.67  E-value=1.3e-16  Score=106.08  Aligned_cols=92  Identities=20%  Similarity=0.389  Sum_probs=76.0

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...+++.|+|||.+..  ..++.++|+||+|+++|++++ |..||....  .....+..+.....+...+..+.+++.+|
T Consensus       173 ~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  250 (281)
T 3cc6_A          173 VTRLPIKWMSPESINF--RRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRC  250 (281)
T ss_dssp             CCCCCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCCCTTCCHHHHHHHHHH
T ss_pred             cCCCCcceeCchhhcc--CCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCCCCCCCHHHHHHHHHH
Confidence            3467788999999987  458999999999999999998 999986533  44444555555566777899999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032788           94 LQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~  110 (133)
                      |..||.+||++.+++++
T Consensus       251 l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          251 WDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             ccCCchhCcCHHHHHHH
Confidence            99999999999999864

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.67  E-value=1.3e-16  Score=107.58  Aligned_cols=91  Identities=24%  Similarity=0.460  Sum_probs=76.2

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH---HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE---WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ..||+.|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..   .....+..+.....+...+..+.+++..|
T Consensus       210 ~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  287 (316)
T 2xir_A          210 ARLPLKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDC  287 (316)
T ss_dssp             EEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHH
T ss_pred             CCcceeecCchhhcc--ccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHH
Confidence            467888999999987  458999999999999999998 999997643   33444555555566777899999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032788           94 LQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~  110 (133)
                      |..||.+||+++++++|
T Consensus       288 l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          288 WHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             cCCChhhCcCHHHHHHH
Confidence            99999999999999875

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.67  E-value=7.6e-17  Score=107.63  Aligned_cols=91  Identities=19%  Similarity=0.292  Sum_probs=76.5

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .||+.|+|||.+..  ..++.++|+||+|+++|++++ |..||....  .....+..+.....+..++..+.+++..||.
T Consensus       174 ~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~  251 (287)
T 1u59_A          174 KWPLKWYAPECINF--RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWI  251 (287)
T ss_dssp             CCCGGGCCHHHHHH--CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTC
T ss_pred             cccccccCHHHhcc--CCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCCCCCcCHHHHHHHHHHcC
Confidence            56788999999987  348999999999999999998 999997654  3444455555566777889999999999999


Q ss_pred             cCCCCCCCHHHHhhCC
Q 032788           96 VNPNDRPTAAQLMEHP  111 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~~  111 (133)
                      .+|.+||++++++++.
T Consensus       252 ~~p~~Rps~~~l~~~l  267 (287)
T 1u59_A          252 YKWEDRPDFLTVEQRM  267 (287)
T ss_dssp             SSGGGSCCHHHHHHHH
T ss_pred             CChhhCcCHHHHHHHH
Confidence            9999999999998764

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.67  E-value=1.6e-16  Score=116.27  Aligned_cols=89  Identities=19%  Similarity=0.306  Sum_probs=75.0

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .+++.|+|||++..  ..++.++||||+|+++|++++ |..||.+..  .....+..+.....+..++..+.+++..||.
T Consensus       500 ~~~~~y~APE~~~~--~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~  577 (613)
T 2ozo_A          500 KWPLKWYAPECINF--RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWI  577 (613)
T ss_dssp             --CCTTSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTC
T ss_pred             CCccceeCHhhhcC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcC
Confidence            45678999999987  458999999999999999998 999997654  4455566666667788899999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032788           96 VNPNDRPTAAQLME  109 (133)
Q Consensus        96 ~~p~~R~s~~~~l~  109 (133)
                      .+|.+||+++++++
T Consensus       578 ~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          578 YKWEDRPDFLTVEQ  591 (613)
T ss_dssp             SSTTTSCCHHHHHH
T ss_pred             CChhHCcCHHHHHH
Confidence            99999999998754

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.67  E-value=1.6e-16  Score=116.63  Aligned_cols=90  Identities=20%  Similarity=0.329  Sum_probs=75.7

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..||+.|+|||++..  ..++.++||||+|+++|++++ |..||.+..  .....+..+.....+..++..+.+++..||
T Consensus       532 ~~~t~~y~APE~~~~--~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl  609 (635)
T 4fl3_A          532 GKWPVKWYAPECINY--YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCW  609 (635)
T ss_dssp             ---CGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             CCCceeeeChhhhcC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHc
Confidence            356788999999987  458999999999999999998 999998754  445556666666778889999999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032788           95 QVNPNDRPTAAQLME  109 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~  109 (133)
                      ..||.+||+++++++
T Consensus       610 ~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          610 TYDVENRPGFAAVEL  624 (635)
T ss_dssp             CSSTTTSCCHHHHHH
T ss_pred             CCCHhHCcCHHHHHH
Confidence            999999999999875

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.67  E-value=7e-17  Score=109.69  Aligned_cols=92  Identities=26%  Similarity=0.413  Sum_probs=75.0

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...|+..|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+..++..+.+++.+|
T Consensus       176 ~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  253 (325)
T 3kex_A          176 EAKTPIKWMALESIHF--GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMVKC  253 (325)
T ss_dssp             ---CCTTTSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCTTBCTTTTHHHHHH
T ss_pred             CCCCcccccChHHhcc--CCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHH
Confidence            4477889999999987  458999999999999999999 999997654  34444555555566677888899999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032788           94 LQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~  110 (133)
                      |..||.+||++++++++
T Consensus       254 l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          254 WMIDENIRPTFKELANE  270 (325)
T ss_dssp             TCSCTTTSCCHHHHHHH
T ss_pred             cCCChhhCcCHHHHHHH
Confidence            99999999999999875

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.67  E-value=1.5e-16  Score=110.28  Aligned_cols=91  Identities=23%  Similarity=0.363  Sum_probs=77.3

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..||+.|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+..++..+.+++..||
T Consensus       253 ~~~t~~y~aPE~~~~--~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  330 (382)
T 3tt0_A          253 GRLPVKWMAPEALFD--RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCW  330 (382)
T ss_dssp             CCCGGGGSCHHHHHS--CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHT
T ss_pred             CCCCcceeCHHHhcC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHc
Confidence            467788999999987  458999999999999999998 999997654  444555556666677788999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032788           95 QVNPNDRPTAAQLMEH  110 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~  110 (133)
                      ..||.+||++++++++
T Consensus       331 ~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          331 HAVPSQRPTFKQLVED  346 (382)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             CCChhhCcCHHHHHHH
Confidence            9999999999998875

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.67  E-value=1.5e-16  Score=108.38  Aligned_cols=92  Identities=16%  Similarity=0.420  Sum_probs=76.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...||+.|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+..++..+.+++..|
T Consensus       235 ~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  312 (343)
T 1luf_A          235 NDAIPIRWMPPESIFY--NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLC  312 (343)
T ss_dssp             -CCBCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             CCcccceecChhhhcc--CCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcCCCCCCCCHHHHHHHHHH
Confidence            3478889999999987  458999999999999999998 999997654  34445555665666778899999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032788           94 LQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~  110 (133)
                      |..||.+||++.+++++
T Consensus       313 l~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          313 WSKLPADRPSFCSIHRI  329 (343)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             cccCcccCCCHHHHHHH
Confidence            99999999999998764

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.67  E-value=1.2e-16  Score=108.62  Aligned_cols=89  Identities=19%  Similarity=0.403  Sum_probs=74.5

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .+|+.|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+..++..+.+++..||.
T Consensus       215 ~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  292 (325)
T 3kul_A          215 KIPIRWTAPEAIAF--RTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWH  292 (325)
T ss_dssp             -CCGGGSCHHHHHH--CEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCcccccCHhHhcC--CCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCCCCcCHHHHHHHHHHcc
Confidence            45678999999987  448999999999999999998 999997654  4445555565666677889999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032788           96 VNPNDRPTAAQLME  109 (133)
Q Consensus        96 ~~p~~R~s~~~~l~  109 (133)
                      .||.+||+++++++
T Consensus       293 ~dp~~Rps~~eil~  306 (325)
T 3kul_A          293 KDRAQRPRFSQIVS  306 (325)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999999875

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.67  E-value=1.5e-16  Score=105.85  Aligned_cols=91  Identities=20%  Similarity=0.273  Sum_probs=76.2

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..||+.|+|||.+..  ..++.++|+||+|+++|++++ |..||....  .....+..+.....+...+..+.+++..||
T Consensus       181 ~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  258 (283)
T 3gen_A          181 SKFPVRWSPPEVLMY--SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCW  258 (283)
T ss_dssp             TTSCGGGCCHHHHHH--CCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTT
T ss_pred             CccCcccCCHHHhcc--CCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCCCcCCHHHHHHHHHHc
Confidence            356778999999987  458999999999999999998 999997654  344455555555667778899999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032788           95 QVNPNDRPTAAQLMEH  110 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~  110 (133)
                      ..+|.+||++++++++
T Consensus       259 ~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          259 HEKADERPTFKILLSN  274 (283)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             cCChhHCcCHHHHHHH
Confidence            9999999999999875

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.67  E-value=1.8e-16  Score=107.87  Aligned_cols=90  Identities=24%  Similarity=0.394  Sum_probs=75.3

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..||+.|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+...+..+.+++..||
T Consensus       179 ~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  256 (327)
T 3lzb_A          179 GKVPIKWMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCW  256 (327)
T ss_dssp             -CCCGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHHHHHHHHT
T ss_pred             CCccccccCHHHHcC--CCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHc
Confidence            366778999999987  458999999999999999999 999997654  334445555555667788999999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032788           95 QVNPNDRPTAAQLME  109 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~  109 (133)
                      ..||.+||+++++++
T Consensus       257 ~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          257 MIDADSRPKFRELII  271 (327)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             CCChhHCcCHHHHHH
Confidence            999999999999876

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.67  E-value=1.8e-16  Score=112.22  Aligned_cols=90  Identities=22%  Similarity=0.484  Sum_probs=76.3

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..++..|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+...+.+..++..+.+++.+||
T Consensus       345 ~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl  422 (454)
T 1qcf_A          345 AKFPIKWTAPEAINF--GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCW  422 (454)
T ss_dssp             SSSCGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHT
T ss_pred             CcccccccCHHHhcc--CCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHc
Confidence            356778999999987  458999999999999999998 999997654  444555666666677889999999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032788           95 QVNPNDRPTAAQLME  109 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~  109 (133)
                      ..||.+||++++++.
T Consensus       423 ~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          423 KNRPEERPTFEYIQS  437 (454)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             cCChhHCcCHHHHHH
Confidence            999999999999865

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.66  E-value=1.5e-16  Score=108.53  Aligned_cols=92  Identities=18%  Similarity=0.289  Sum_probs=75.5

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH---HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE---WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ..||+.|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..   .....+..+.....+...+..+.+++.+|
T Consensus       234 ~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  311 (344)
T 1rjb_A          234 ARLPVKWMAPESLFE--GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSC  311 (344)
T ss_dssp             EEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             ccCccCccCHHHhcc--CCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHH
Confidence            467788999999987  458999999999999999998 999997653   22333444555566777899999999999


Q ss_pred             cccCCCCCCCHHHHhhCC
Q 032788           94 LQVNPNDRPTAAQLMEHP  111 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~~  111 (133)
                      |..||.+||++.+++++.
T Consensus       312 l~~dp~~Rps~~~l~~~l  329 (344)
T 1rjb_A          312 WAFDSRKRPSFPNLTSFL  329 (344)
T ss_dssp             TCSSGGGSCCHHHHHHHH
T ss_pred             cCCCchhCcCHHHHHHHH
Confidence            999999999999998753

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.66  E-value=2.1e-16  Score=111.84  Aligned_cols=90  Identities=20%  Similarity=0.337  Sum_probs=76.6

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..++..|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+..++..+.+++..||
T Consensus       346 ~~~~~~y~aPE~~~~--~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl  423 (450)
T 1k9a_A          346 GKLPVKWTAPEALRE--KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCW  423 (450)
T ss_dssp             -CCCTTTSCHHHHHS--SCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             CCCCcceeCHHHhcC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHc
Confidence            367788999999987  458999999999999999998 999997654  445556666666778889999999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032788           95 QVNPNDRPTAAQLME  109 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~  109 (133)
                      ..||.+||++.++++
T Consensus       424 ~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          424 HLDAATRPTFLQLRE  438 (450)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             CCChhHCcCHHHHHH
Confidence            999999999998864

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.66  E-value=1.2e-16  Score=110.65  Aligned_cols=89  Identities=19%  Similarity=0.388  Sum_probs=74.1

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+...+.+..++..+.+++..||.
T Consensus       276 ~~~~~y~aPE~~~~--~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  353 (377)
T 3cbl_A          276 QVPVKWTAPEALNY--GRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWA  353 (377)
T ss_dssp             EEEGGGSCHHHHHH--CEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCcCcCCHhHhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcC
Confidence            35678999999987  448999999999999999998 999997654  3344455555566677889999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032788           96 VNPNDRPTAAQLME  109 (133)
Q Consensus        96 ~~p~~R~s~~~~l~  109 (133)
                      .||.+||+++++++
T Consensus       354 ~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          354 YEPGQRPSFSTIYQ  367 (377)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             CCchhCcCHHHHHH
Confidence            99999999999875

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.66  E-value=4.6e-16  Score=106.06  Aligned_cols=90  Identities=20%  Similarity=0.369  Sum_probs=74.4

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .+|..|+|||.+..  ..++.++|+||+|+++|++++ |..||....  .....+..+.....+..++..+.+++..||.
T Consensus       211 ~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  288 (333)
T 1mqb_A          211 KIPIRWTAPEAISY--RKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQ  288 (333)
T ss_dssp             CCCGGGSCHHHHHS--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTC
T ss_pred             CccccccCchhccc--CCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCcccCCHHHHHHHHHHcC
Confidence            55778999999987  458999999999999999998 999997654  3444555555556667788999999999999


Q ss_pred             cCCCCCCCHHHHhhC
Q 032788           96 VNPNDRPTAAQLMEH  110 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~  110 (133)
                      .+|.+||++.+++++
T Consensus       289 ~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          289 QERARRPKFADIVSI  303 (333)
T ss_dssp             SSTTTSCCHHHHHHH
T ss_pred             CChhhCcCHHHHHHH
Confidence            999999999988764

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.66  E-value=2e-16  Score=107.05  Aligned_cols=91  Identities=23%  Similarity=0.414  Sum_probs=76.1

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..||+.|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+..++..+.+++.+||
T Consensus       200 ~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  277 (322)
T 1p4o_A          200 GLLPVRWMSPESLKD--GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCW  277 (322)
T ss_dssp             SEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             CCCCCCccChhhhcc--CCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHc
Confidence            467888999999987  448999999999999999998 888887654  334445555555667788999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032788           95 QVNPNDRPTAAQLMEH  110 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~  110 (133)
                      ..||.+||++.+++++
T Consensus       278 ~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          278 QYNPKMRPSFLEIISS  293 (322)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             CCCcccCcCHHHHHHH
Confidence            9999999999999875

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.66  E-value=2.4e-16  Score=105.38  Aligned_cols=89  Identities=20%  Similarity=0.338  Sum_probs=74.5

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .|++.|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+..++..+.+++..||.
T Consensus       181 ~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  258 (291)
T 1xbb_A          181 KWPVKWYAPECINY--YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWT  258 (291)
T ss_dssp             CCCGGGCCHHHHHH--CEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCceeeChHHhcc--CCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcC
Confidence            45688999999987  347899999999999999998 999997654  3344455555566677889999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032788           96 VNPNDRPTAAQLME  109 (133)
Q Consensus        96 ~~p~~R~s~~~~l~  109 (133)
                      .||.+||++.++++
T Consensus       259 ~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          259 YDVENRPGFAAVEL  272 (291)
T ss_dssp             SSTTTSCCHHHHHH
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999999875

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.66  E-value=1.2e-16  Score=105.65  Aligned_cols=91  Identities=21%  Similarity=0.301  Sum_probs=75.4

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..||+.|+|||.+..  ..++.++|+||+|+++|++++ |..||....  .....+..+.....+...+..+.+++..||
T Consensus       165 ~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  242 (268)
T 3sxs_A          165 TKFPVKWSAPEVFHY--FKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCW  242 (268)
T ss_dssp             CCCCGGGCCHHHHHH--SEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHTT
T ss_pred             CCcCcccCCHHHHhc--cCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCCCcChHHHHHHHHHHc
Confidence            355677999999987  348899999999999999998 999997654  344445555555667778999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032788           95 QVNPNDRPTAAQLMEH  110 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~  110 (133)
                      ..+|.+||++.+++++
T Consensus       243 ~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          243 HELPEKRPTFQQLLSS  258 (268)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             CCChhhCcCHHHHHHH
Confidence            9999999999999875

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.66  E-value=2.7e-16  Score=103.70  Aligned_cols=92  Identities=21%  Similarity=0.302  Sum_probs=75.8

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...|+..|+|||.+..  ..++.++|+||+|+++|++++ |..||....  .....+..+.....+...+..+.+++..|
T Consensus       164 ~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~  241 (267)
T 3t9t_A          164 GTKFPVKWASPEVFSF--SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHC  241 (267)
T ss_dssp             STTCCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHH
T ss_pred             cccccccccChhhhcC--CCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCCCccCcHHHHHHHHHH
Confidence            3467788999999987  448999999999999999999 899987654  33445555555556677889999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032788           94 LQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~  110 (133)
                      |..+|.+||++++++++
T Consensus       242 l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          242 WRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             ccCChhhCcCHHHHHHH
Confidence            99999999999999864

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.66  E-value=1.5e-16  Score=107.09  Aligned_cols=91  Identities=22%  Similarity=0.395  Sum_probs=76.2

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..|++.|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+..++..+.+++.+||
T Consensus       212 ~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  289 (314)
T 2ivs_A          212 GRIPVKWMAIESLFD--HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCW  289 (314)
T ss_dssp             CCSCGGGCCHHHHHH--CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             CCCcccccChhhhcC--CCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCcCCCCccCCHHHHHHHHHHc
Confidence            366788999999987  448999999999999999998 999997654  344455555556667788999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032788           95 QVNPNDRPTAAQLMEH  110 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~  110 (133)
                      ..||.+||++++++++
T Consensus       290 ~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          290 KQEPDKRPVFADISKD  305 (314)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             cCChhhCcCHHHHHHH
Confidence            9999999999999864

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.66  E-value=1.7e-16  Score=106.19  Aligned_cols=92  Identities=11%  Similarity=0.087  Sum_probs=71.3

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHHHHHHh----CCCCCCCCCCCHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WALFKIAR----GELPPIPDSVSRDA   86 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~~~~~~----~~~~~~~~~~~~~~   86 (133)
                      ...+||+.|+|||.+..  ..++.++|+||+|+++|++++|..||.+..     .....+..    .........++..+
T Consensus       176 ~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  253 (298)
T 1csn_A          176 KNLSGTARYMSINTHLG--REQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEF  253 (298)
T ss_dssp             CCCCSCTTTCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHH
T ss_pred             cCCCCCcccCCchhhcC--CCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHH
Confidence            34579999999999987  458999999999999999999999997632     22222211    11112234678999


Q ss_pred             HHHHHHHcccCCCCCCCHHHHhh
Q 032788           87 RDFILKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        87 ~~~~~~~l~~~p~~R~s~~~~l~  109 (133)
                      .+++..||..||.+||+++++++
T Consensus       254 ~~li~~~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          254 YKYMHYARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             HHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHHHhcCCcccCCCHHHHHH
Confidence            99999999999999999998865

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.66  E-value=1.3e-16  Score=109.27  Aligned_cols=93  Identities=14%  Similarity=0.104  Sum_probs=70.8

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhCCCCCC---------CCCCC
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELPPI---------PDSVS   83 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~~~~~~---------~~~~~   83 (133)
                      ....||+.|+|||.+..  ..++.++|+||+|+++|++++|..||.+..   ..............         ....+
T Consensus       218 ~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (345)
T 2v62_A          218 KGHNGTIEFTSLDAHKG--VALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSC  295 (345)
T ss_dssp             GCSCSCTTTCCHHHHHT--CCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCC
T ss_pred             cccCCCccccCHHHhcC--CCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccH
Confidence            45589999999999987  458999999999999999999999995421   11111111111111         12678


Q ss_pred             HHHHHHHHHHcccCCCCCCCHHHHhhC
Q 032788           84 RDARDFILKCLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        84 ~~~~~~~~~~l~~~p~~R~s~~~~l~~  110 (133)
                      ..+.+++..||..||.+||+++++++.
T Consensus       296 ~~l~~li~~~l~~dp~~Rps~~~l~~~  322 (345)
T 2v62_A          296 CEIAQFLVCAHSLAYDEKPNYQALKKI  322 (345)
T ss_dssp             HHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred             HHHHHHHHHHhhcCcccCCCHHHHHHH
Confidence            899999999999999999999998864

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.66  E-value=3.1e-16  Score=110.97  Aligned_cols=90  Identities=24%  Similarity=0.413  Sum_probs=75.5

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..++..|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+...+.+..++..+.+++..||
T Consensus       341 ~~~~~~y~aPE~~~~--~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl  418 (452)
T 1fmk_A          341 AKFPIKWTAPEAALY--GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW  418 (452)
T ss_dssp             --CCGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHT
T ss_pred             CcccccccCHhHHhc--CCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHc
Confidence            356778999999987  458999999999999999999 899997654  445555666666677789999999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032788           95 QVNPNDRPTAAQLME  109 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~  109 (133)
                      ..||.+||+++++++
T Consensus       419 ~~dP~~Rpt~~~l~~  433 (452)
T 1fmk_A          419 RKEPEERPTFEYLQA  433 (452)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             cCChhhCcCHHHHHH
Confidence            999999999999876

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.66  E-value=5.4e-16  Score=103.82  Aligned_cols=90  Identities=18%  Similarity=0.264  Sum_probs=73.0

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH------------------HHHHHHhCCCCCCC
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW------------------ALFKIARGELPPIP   79 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~------------------~~~~~~~~~~~~~~   79 (133)
                      ..|+..|+|||.+..  ..++.++|+||+|+++|++++|..|+.....                  ....+........+
T Consensus       177 ~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (295)
T 3ugc_A          177 GESPIFWYAPESLTE--SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP  254 (295)
T ss_dssp             TTCGGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCC
T ss_pred             CCCccceeCcHHhcC--CCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCC
Confidence            467778999999987  4589999999999999999999888765321                  12233344455667


Q ss_pred             CCCCHHHHHHHHHHcccCCCCCCCHHHHhh
Q 032788           80 DSVSRDARDFILKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        80 ~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~  109 (133)
                      ..++..+.+++..||..||.+||+++++++
T Consensus       255 ~~~~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          255 DGCPDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             TTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             cCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            788999999999999999999999999875

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.65  E-value=2.2e-16  Score=105.58  Aligned_cols=92  Identities=12%  Similarity=0.112  Sum_probs=70.9

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHHHHHH----hCCCCCCCCCCCHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WALFKIA----RGELPPIPDSVSRDA   86 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~~~~~----~~~~~~~~~~~~~~~   86 (133)
                      ....||+.|+|||.+.+  ..++.++|+||+|+++|++++|..||.+..     .....+.    ..........++..+
T Consensus       173 ~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  250 (296)
T 3uzp_A          173 KNLTGTARYASINTHLG--IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEF  250 (296)
T ss_dssp             CCCCSCTTTCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHH
T ss_pred             cccccccccCChhhhcC--CCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHH
Confidence            34589999999999987  448999999999999999999999997532     1121111    111111235678999


Q ss_pred             HHHHHHHcccCCCCCCCHHHHhh
Q 032788           87 RDFILKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        87 ~~~~~~~l~~~p~~R~s~~~~l~  109 (133)
                      .+++..||..||.+||+++++++
T Consensus       251 ~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          251 ATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHHHHHHhcCcCcCCCHHHHHH
Confidence            99999999999999999998875

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.65  E-value=2.5e-16  Score=105.22  Aligned_cols=91  Identities=11%  Similarity=0.101  Sum_probs=70.4

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHHHHHH----hCCCCCCCCCCCHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WALFKIA----RGELPPIPDSVSRDAR   87 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~~~~~----~~~~~~~~~~~~~~~~   87 (133)
                      ...||+.|+|||.+.+  ..++.++|+||+|+++|++++|..||.+..     .....+.    ..........++..+.
T Consensus       174 ~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  251 (296)
T 4hgt_A          174 NLTGTARYASINTHLG--IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFA  251 (296)
T ss_dssp             CCCSCGGGCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHH
T ss_pred             ccCCCccccchHHhcC--CCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHH
Confidence            4589999999999987  458999999999999999999999997532     1111111    1111112256789999


Q ss_pred             HHHHHHcccCCCCCCCHHHHhh
Q 032788           88 DFILKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        88 ~~~~~~l~~~p~~R~s~~~~l~  109 (133)
                      +++..||..+|.+||+++++++
T Consensus       252 ~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          252 TYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHHHHHhcCCCCCCCHHHHHH
Confidence            9999999999999999998875

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.65  E-value=3.4e-16  Score=105.37  Aligned_cols=91  Identities=21%  Similarity=0.349  Sum_probs=74.1

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH---HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE---WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ..||+.|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..   .....+........+...+..+.+++.+|
T Consensus       207 ~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  284 (313)
T 1t46_A          207 ARLPVKWMAPESIFN--CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTC  284 (313)
T ss_dssp             SEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHH
T ss_pred             CCCcceeeChHHhcC--CCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHH
Confidence            356778999999987  458999999999999999998 999987643   22333444444455677899999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032788           94 LQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~  110 (133)
                      |..||.+||++++++++
T Consensus       285 l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          285 WDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             cCCCchhCcCHHHHHHH
Confidence            99999999999999864

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.65  E-value=2.8e-17  Score=115.11  Aligned_cols=93  Identities=14%  Similarity=0.082  Sum_probs=72.8

Q ss_pred             hcccccccccccccccc--------CCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHH--HHHHHhCCCCCCCCCCCHH
Q 032788           16 KWHVSRWNSLTDQVVNS--------KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA--LFKIARGELPPIPDSVSRD   85 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~--------~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~   85 (133)
                      ...+| +.|+|||.+..        ....++.++|+||+|+++|++++|..||......  ...+.     .....++..
T Consensus       266 ~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~-----~~~~~~~~~  339 (413)
T 3dzo_A          266 VSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIF-----RSCKNIPQP  339 (413)
T ss_dssp             CCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGG-----SSCCCCCHH
T ss_pred             ccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHH-----hhcccCCHH
Confidence            34588 99999999931        1134788999999999999999999999765411  11111     112357899


Q ss_pred             HHHHHHHHcccCCCCCCCHHHHhhCCCCC
Q 032788           86 ARDFILKCLQVNPNDRPTAAQLMEHPFVK  114 (133)
Q Consensus        86 ~~~~~~~~l~~~p~~R~s~~~~l~~~~~~  114 (133)
                      +.+++.+||..||.+||++.++++|+||+
T Consensus       340 ~~~li~~~l~~dP~~Rpt~~~~l~~~~~~  368 (413)
T 3dzo_A          340 VRALLEGFLRYPKEDRLLPLQAMETPEYE  368 (413)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred             HHHHHHHHccCChhhCcCHHHHHhCHHHH
Confidence            99999999999999999999999999986

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.64  E-value=4.3e-16  Score=107.90  Aligned_cols=92  Identities=18%  Similarity=0.316  Sum_probs=73.4

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...+++.|+|||.+..  ..++.++|+||+|+++|++++ +.+||....  .....+..+.....+..++..+.+++..|
T Consensus       255 ~~~~~~~y~aPE~~~~--~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~c  332 (373)
T 3c1x_A          255 GAKLPVKWMALESLQT--QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC  332 (373)
T ss_dssp             ---CCGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             CCCCcccccChHHhcC--CCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHH
Confidence            3467788999999987  458999999999999999999 677776543  33344455555566778899999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032788           94 LQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~  110 (133)
                      |..||.+||++++++++
T Consensus       333 l~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          333 WHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             cCCChhhCcCHHHHHHH
Confidence            99999999999998764

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.64  E-value=2.8e-16  Score=108.77  Aligned_cols=89  Identities=20%  Similarity=0.390  Sum_probs=70.2

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|+|||.+..  ..++.++|+||+|+++|++++ |..||....  .....+..+...+.+..++..+.+++..||.
T Consensus       211 ~~~~~y~aPE~~~~--~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~  288 (373)
T 2qol_A          211 KIPIRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQ  288 (373)
T ss_dssp             ---CTTSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCCTTCBHHHHHHHHHHTC
T ss_pred             CcCCCccChhhhcc--CCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHhC
Confidence            45678999999987  458999999999999999987 999997654  3344444444445566788999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032788           96 VNPNDRPTAAQLME  109 (133)
Q Consensus        96 ~~p~~R~s~~~~l~  109 (133)
                      .||.+||+++++++
T Consensus       289 ~dp~~RPs~~~i~~  302 (373)
T 2qol_A          289 KDRNNRPKFEQIVS  302 (373)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             cChhhCcCHHHHHH
Confidence            99999999998865

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.64  E-value=5.4e-16  Score=103.02  Aligned_cols=90  Identities=18%  Similarity=0.315  Sum_probs=74.0

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..++..|+|||.+..  ..++.++|+||+|+++|++++ |..||....  .....+..+.....+...+..+.+++..||
T Consensus       174 ~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  251 (278)
T 1byg_A          174 GKLPVKWTAPEALRE--KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCW  251 (278)
T ss_dssp             --CCTTTSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             CCccccccCHHHhCC--CCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHh
Confidence            467888999999987  458999999999999999998 999987654  344445455555667788999999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032788           95 QVNPNDRPTAAQLME  109 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~  109 (133)
                      ..||.+||++.++++
T Consensus       252 ~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          252 HLDAAMRPSFLQLRE  266 (278)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             cCChhhCCCHHHHHH
Confidence            999999999999875

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.64  E-value=1.1e-16  Score=108.31  Aligned_cols=95  Identities=17%  Similarity=0.242  Sum_probs=70.3

Q ss_pred             ccccccccccccccccC------CCCCCchhHHHHHHHHHHHHHhCCCCCCChH------HHHHHHHhCCCCC-------
Q 032788           17 WHVSRWNSLTDQVVNSK------NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE------WALFKIARGELPP-------   77 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~------~~~~~~~~diws~g~~~~~l~~~~~p~~~~~------~~~~~~~~~~~~~-------   77 (133)
                      ..+||+.|+|||++...      ...++.++|+||+|+++|++++|..||....      .....+..+....       
T Consensus       174 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  253 (319)
T 4euu_A          174 SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQK  253 (319)
T ss_dssp             CCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEEC
T ss_pred             ecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhc
Confidence            45799999999998620      1457899999999999999999999986321      3333333332211       


Q ss_pred             -----------C------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCC
Q 032788           78 -----------I------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHP  111 (133)
Q Consensus        78 -----------~------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~  111 (133)
                                 .      ....+..+.+++.+||..||.+|++++|+++|+
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~  304 (319)
T 4euu_A          254 AENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET  304 (319)
T ss_dssp             STTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred             ccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence                       0      112345778899999999999999999999987

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.64  E-value=3.3e-16  Score=106.65  Aligned_cols=91  Identities=22%  Similarity=0.362  Sum_probs=75.9

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..+|+.|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+..++..+.+++..||
T Consensus       219 ~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  296 (334)
T 2pvf_A          219 GRLPVKWMAPEALFD--RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCW  296 (334)
T ss_dssp             CCCCGGGCCHHHHHH--CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             CCcccceeChHHhcC--CCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHc
Confidence            356788999999987  448999999999999999998 999997654  334455556556667788999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032788           95 QVNPNDRPTAAQLMEH  110 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~  110 (133)
                      ..+|.+||++++++++
T Consensus       297 ~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          297 HAVPSQRPTFKQLVED  312 (334)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             cCChhhCcCHHHHHHH
Confidence            9999999999998864

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.64  E-value=4.5e-16  Score=105.78  Aligned_cols=91  Identities=19%  Similarity=0.327  Sum_probs=73.7

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH---HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE---WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ..||+.|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..   ..............+...+..+.+++..|
T Consensus       226 ~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  303 (333)
T 2i1m_A          226 ARLPVKWMAPESIFD--CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQAC  303 (333)
T ss_dssp             CEECGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHH
T ss_pred             CCCCccccCHHHhcc--CCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHH
Confidence            356778999999987  458999999999999999998 888987643   22333344555555677889999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032788           94 LQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~  110 (133)
                      |..||.+||++++++++
T Consensus       304 l~~~p~~Rps~~~l~~~  320 (333)
T 2i1m_A          304 WALEPTHRPTFQQICSF  320 (333)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             hccChhhCcCHHHHHHH
Confidence            99999999999998863

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.64  E-value=2.6e-16  Score=106.85  Aligned_cols=91  Identities=22%  Similarity=0.377  Sum_probs=74.3

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..+++.|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+..++..+.+++.+||
T Consensus       201 ~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  278 (327)
T 1fvr_A          201 GRLPVRWMAIESLNY--SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCW  278 (327)
T ss_dssp             --CCTTTCCHHHHHH--CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHT
T ss_pred             CCCCccccChhhhcc--ccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHc
Confidence            356788999999987  448999999999999999998 999997654  334444455555667788999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032788           95 QVNPNDRPTAAQLMEH  110 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~  110 (133)
                      ..+|.+||++++++++
T Consensus       279 ~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          279 REKPYERPSFAQILVS  294 (327)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             cCChhhCcCHHHHHHH
Confidence            9999999999998874

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.64  E-value=4.7e-16  Score=104.88  Aligned_cols=92  Identities=22%  Similarity=0.345  Sum_probs=74.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...+++.|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+..++..+.+++..|
T Consensus       208 ~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  285 (313)
T 3brb_A          208 IAKMPVKWIAIESLAD--RVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSC  285 (313)
T ss_dssp             ---CCGGGSCHHHHHS--SCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCBTTCCHHHHHHHHHT
T ss_pred             ccCCCccccCchhhcC--CCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHH
Confidence            3467788999999987  458999999999999999999 888887643  34444555555666778899999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032788           94 LQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~  110 (133)
                      |..||.+||++.+++++
T Consensus       286 l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          286 WRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             cCCChhhCcCHHHHHHH
Confidence            99999999999998864

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.64  E-value=7.7e-16  Score=103.96  Aligned_cols=109  Identities=17%  Similarity=0.358  Sum_probs=74.4

Q ss_pred             cccccccccccccccC-------CCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCC-CCCCCHHHH
Q 032788           18 HVSRWNSLTDQVVNSK-------NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI-PDSVSRDAR   87 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~-------~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~   87 (133)
                      ..||+.|+|||.+...       ...++.++|+||+|+++|++++|..||....  .....+..+..+.. ...++..+.
T Consensus       194 ~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  273 (319)
T 2y4i_B          194 QNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEIS  273 (319)
T ss_dssp             CSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCCCSSCCTTHH
T ss_pred             CCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCCcCCCCHHHH
Confidence            4699999999998741       1347889999999999999999999997654  33333444433332 235778899


Q ss_pred             HHHHHHcccCCCCCCCHHHHhhCCCCCCCCCCCCCCCcccc
Q 032788           88 DFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHH  128 (133)
Q Consensus        88 ~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~~~~~~~~~~~  128 (133)
                      +++..||..||.+||+++++++.  +.......-.++.|.+
T Consensus       274 ~li~~~l~~~p~~Rpt~~~l~~~--l~~l~~~~~~~~~~~~  312 (319)
T 2y4i_B          274 DILLFCWAFEQEERPTFTKLMDM--LEKLPKRNRRLSHPGH  312 (319)
T ss_dssp             HHHHHHHCSSTTTSCCHHHHHHH--HTTC------------
T ss_pred             HHHHHHhcCChhhCcCHHHHHHH--HHHHHHhhccCCCCcc
Confidence            99999999999999999999874  3433333333344433

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.64  E-value=7.5e-16  Score=102.66  Aligned_cols=90  Identities=19%  Similarity=0.386  Sum_probs=74.8

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..||+.|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+........+..++..+.+++..|+
T Consensus       172 ~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  249 (288)
T 3kfa_A          172 AKFPIKWTAPESLAY--NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACW  249 (288)
T ss_dssp             EEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             CccccCcCChhhhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHh
Confidence            356778999999987  458999999999999999999 888887644  344444555555667788999999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032788           95 QVNPNDRPTAAQLME  109 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~  109 (133)
                      ..||.+||+++++++
T Consensus       250 ~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          250 QWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             CCChhhCcCHHHHHH
Confidence            999999999999875

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.63  E-value=4.7e-16  Score=111.21  Aligned_cols=89  Identities=19%  Similarity=0.393  Sum_probs=75.2

Q ss_pred             ccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      .++..|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+..++..+.+++..||.
T Consensus       380 ~~~~~y~aPE~~~~--~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  457 (495)
T 1opk_A          380 KFPIKWTAPESLAY--NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ  457 (495)
T ss_dssp             CCCGGGCCHHHHHH--CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred             cCCcceeCHhHHhc--CCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcC
Confidence            55678999999987  448999999999999999998 889987654  4444555566666778899999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032788           96 VNPNDRPTAAQLME  109 (133)
Q Consensus        96 ~~p~~R~s~~~~l~  109 (133)
                      .||.+||+++++++
T Consensus       458 ~dP~~RPs~~el~~  471 (495)
T 1opk_A          458 WNPSDRPSFAEIHQ  471 (495)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             cChhHCcCHHHHHH
Confidence            99999999999876

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.63  E-value=7.3e-16  Score=111.15  Aligned_cols=90  Identities=24%  Similarity=0.413  Sum_probs=76.3

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..++..|+|||.+..  ..++.++||||+|+++|++++ |..||.+..  .....+..+.....+..++..+.+++..||
T Consensus       424 ~~~~~~y~aPE~~~~--~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl  501 (535)
T 2h8h_A          424 AKFPIKWTAPEAALY--GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW  501 (535)
T ss_dssp             TTSCGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             CcCcccccCHHHhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHc
Confidence            356778999999987  458999999999999999999 899997653  445555666666667788999999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032788           95 QVNPNDRPTAAQLME  109 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~  109 (133)
                      ..||.+||+++++++
T Consensus       502 ~~dP~~RPt~~~l~~  516 (535)
T 2h8h_A          502 RKEPEERPTFEYLQA  516 (535)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             CCChhHCcCHHHHHH
Confidence            999999999999876

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.63  E-value=1.1e-15  Score=102.41  Aligned_cols=91  Identities=19%  Similarity=0.318  Sum_probs=73.2

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...||+.|+|||.+..  ..++.++|+||+|+++|++++ +.+||....  .....+..+.....+...+..+.+++..|
T Consensus       191 ~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  268 (298)
T 3f66_A          191 GAKLPVKWMALESLQT--QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC  268 (298)
T ss_dssp             -CCBCGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             CCCCCccccChHHhcC--CCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHH
Confidence            4477788999999987  458999999999999999999 556665443  33444455555566777899999999999


Q ss_pred             cccCCCCCCCHHHHhh
Q 032788           94 LQVNPNDRPTAAQLME  109 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~  109 (133)
                      |..+|.+||+++++++
T Consensus       269 l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          269 WHPKAEMRPSFSELVS  284 (298)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             cCCChhhCcCHHHHHH
Confidence            9999999999999876

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.62  E-value=3.4e-16  Score=107.81  Aligned_cols=89  Identities=10%  Similarity=0.075  Sum_probs=68.5

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HH-HH-----------HHHhCCCCCCCCCC
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WA-LF-----------KIARGELPPIPDSV   82 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~-~~-----------~~~~~~~~~~~~~~   82 (133)
                      ..+||+.|+|||.+.+  ..++.++||||+|+++|++++|..||.+..  .. ..           .+.....  .....
T Consensus       220 ~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  295 (364)
T 3op5_A          220 CHDGTIEFTSIDAHNG--VAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCF--PAANA  295 (364)
T ss_dssp             CCCCCTTTCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHS--CTTCC
T ss_pred             ccCCCCCccCHHHhCC--CCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhc--ccccC
Confidence            3469999999999987  448999999999999999999999997531  11 10           0000100  12467


Q ss_pred             CHHHHHHHHHHcccCCCCCCCHHHHhh
Q 032788           83 SRDARDFILKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        83 ~~~~~~~~~~~l~~~p~~R~s~~~~l~  109 (133)
                      +..+.+++..||..+|.+||+++++++
T Consensus       296 ~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          296 PGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             CHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            889999999999999999999988765

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.62  E-value=1.6e-15  Score=101.36  Aligned_cols=94  Identities=17%  Similarity=0.448  Sum_probs=69.4

Q ss_pred             hccccccccccccccccC-CCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhCCCCC----CCCCCCHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELPP----IPDSVSRDAR   87 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~-~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~   87 (133)
                      ....||+.|+|||.+... ...++.++|+||+|+++|++++|..||.+..   .....+..+....    ....++..+.
T Consensus       180 ~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  259 (289)
T 3og7_A          180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMK  259 (289)
T ss_dssp             ----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHH
T ss_pred             cccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHH
Confidence            345799999999998621 1457889999999999999999999997643   2223333332221    2346789999


Q ss_pred             HHHHHHcccCCCCCCCHHHHhh
Q 032788           88 DFILKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        88 ~~~~~~l~~~p~~R~s~~~~l~  109 (133)
                      +++..||..+|.+||+++++++
T Consensus       260 ~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          260 RLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHccCChhhCCCHHHHHH
Confidence            9999999999999999999876

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.62  E-value=8.4e-16  Score=102.06  Aligned_cols=90  Identities=24%  Similarity=0.417  Sum_probs=74.3

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..++..|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+...+..+.+++..||
T Consensus       170 ~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  247 (279)
T 1qpc_A          170 AKFPIKWTAPEAINY--GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCW  247 (279)
T ss_dssp             CCCCTTTSCHHHHHH--CEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             CCCccCccChhhhcc--CCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCCcccccHHHHHHHHHHh
Confidence            356778999999987  448899999999999999998 899987654  344455555555667788999999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032788           95 QVNPNDRPTAAQLME  109 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~  109 (133)
                      ..+|.+||+++++++
T Consensus       248 ~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          248 KERPEDRPTFDYLRS  262 (279)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             ccChhhCCCHHHHHH
Confidence            999999999998875

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.62  E-value=2.1e-15  Score=100.85  Aligned_cols=91  Identities=22%  Similarity=0.354  Sum_probs=73.1

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCC-CCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRP-YFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...|++.|+|||.+..  ..++.++|+||+|+++|++++|..| +....  .....+........+...+..+.+++..|
T Consensus       187 ~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  264 (298)
T 3pls_A          187 HARLPVKWTALESLQT--YRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQC  264 (298)
T ss_dssp             CTTCGGGGSCHHHHTT--CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             CCCCCccccChhhhcc--CCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccchHHHHHHHHHH
Confidence            4577889999999987  4589999999999999999995555 44332  34444555555566777899999999999


Q ss_pred             cccCCCCCCCHHHHhh
Q 032788           94 LQVNPNDRPTAAQLME  109 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~  109 (133)
                      |..||.+||+++++++
T Consensus       265 l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          265 WEADPAVRPTFRVLVG  280 (298)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             ccCChhhCcCHHHHHH
Confidence            9999999999998876

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.62  E-value=2.1e-15  Score=101.58  Aligned_cols=92  Identities=26%  Similarity=0.568  Sum_probs=69.4

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH----HHHHHHHhCCCCCC-CCCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELPPI-PDSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~   91 (133)
                      ...|++.|+|||.+..  ..++.++|+||+|+++|++++|..||.+..    .....+.....+.. ....+..+.+++.
T Consensus       195 ~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  272 (310)
T 2wqm_A          195 SLVGTPYYMSPERIHE--NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVN  272 (310)
T ss_dssp             ----CCSSCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHH
T ss_pred             ccCCCeeEeChHHhCC--CCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHH
Confidence            3578999999999987  458999999999999999999999997643    22233333333333 3567899999999


Q ss_pred             HHcccCCCCCCCHHHHhhC
Q 032788           92 KCLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~  110 (133)
                      .||..||.+||++++++++
T Consensus       273 ~~l~~dp~~Rps~~~il~~  291 (310)
T 2wqm_A          273 MCINPDPEKRPDVTYVYDV  291 (310)
T ss_dssp             HHTCSSGGGSCCHHHHHHH
T ss_pred             HHcCCChhhCCCHHHHHHH
Confidence            9999999999999998864

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.61  E-value=3.4e-16  Score=104.39  Aligned_cols=93  Identities=16%  Similarity=0.318  Sum_probs=69.2

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhC-CCCCCChHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ...||..|+|||.+... ..++.++|+||+|+++|++++| ..++..................+...+..+.+++..||.
T Consensus       176 ~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  254 (289)
T 4fvq_A          176 ILQERIPWVPPECIENP-KNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPKAAELANLINNCMD  254 (289)
T ss_dssp             HHHHTTTTSCHHHHHCG-GGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCSSCTTHHHHHHHSC
T ss_pred             ccCCcCcccCHHHhCCC-CCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCCCCCCCCHHHHHHHHHHcC
Confidence            34688899999999762 3479999999999999999995 455544332211111122334455667789999999999


Q ss_pred             cCCCCCCCHHHHhhC
Q 032788           96 VNPNDRPTAAQLMEH  110 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~  110 (133)
                      .||.+||++++++++
T Consensus       255 ~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          255 YEPDHRPSFRAIIRD  269 (289)
T ss_dssp             SSGGGSCCHHHHHHH
T ss_pred             CChhHCcCHHHHHHH
Confidence            999999999999875

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.61  E-value=1.3e-15  Score=102.77  Aligned_cols=94  Identities=17%  Similarity=0.257  Sum_probs=71.2

Q ss_pred             ccccccccccccccccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCChH----HHHHHHHhCCCCCCCCCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKN-GGYGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELPPIPDSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~-~~~~~~~diws~g~~~~~l~~~~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (133)
                      ...||+.|+|||.+.... ..++.++|+||+|+++|++++|..||....    ............+.+...+..+.+++.
T Consensus       202 ~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  281 (317)
T 2buj_A          202 AQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLN  281 (317)
T ss_dssp             HHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--CCCCTTSCHHHHHHHH
T ss_pred             cccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccCCCCccccCCHHHHHHHH
Confidence            456799999999987521 125789999999999999999999986422    122222223333334567899999999


Q ss_pred             HHcccCCCCCCCHHHHhhC
Q 032788           92 KCLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~  110 (133)
                      +||..||.+||++++++++
T Consensus       282 ~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          282 SMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             HHTCSSGGGSCCHHHHHHH
T ss_pred             HHhhcChhhCCCHHHHHHH
Confidence            9999999999999999886

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.61  E-value=6.5e-16  Score=102.63  Aligned_cols=92  Identities=21%  Similarity=0.418  Sum_probs=74.5

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHccc
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV   96 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   96 (133)
                      ...||+.|+|||.+..  ..++.++|+||+|+++|+++++..|+.........+...   ..+...+..+.+++..||..
T Consensus       180 ~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~  254 (284)
T 2a19_B          180 RSKGTLRYMSPEQISS--QDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDG---IISDIFDKKEKTLLQKLLSK  254 (284)
T ss_dssp             CCCSCCTTSCHHHHHC--SCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTT---CCCTTSCHHHHHHHHHHTCS
T ss_pred             ccCCcccccChhhhcc--CCCcchhhhHHHHHHHHHHHhcCCcchhHHHHHHHhhcc---cccccCCHHHHHHHHHHccC
Confidence            4579999999999987  458999999999999999999988775443333333332   23566889999999999999


Q ss_pred             CCCCCCCHHHHhhCCCC
Q 032788           97 NPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        97 ~p~~R~s~~~~l~~~~~  113 (133)
                      ||.+||++.+++++.+.
T Consensus       255 dp~~Rps~~e~l~~l~~  271 (284)
T 2a19_B          255 KPEDRPNTSEILRTLTV  271 (284)
T ss_dssp             SGGGSCCHHHHHHHHHH
T ss_pred             ChhhCcCHHHHHHHHHH
Confidence            99999999999998654

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.60  E-value=2.6e-15  Score=102.97  Aligned_cols=91  Identities=15%  Similarity=0.177  Sum_probs=69.6

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHH---hCCCCCCC------CCCCH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIA---RGELPPIP------DSVSR   84 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~---~~~~~~~~------~~~~~   84 (133)
                      ...||+.|+|||.+.+  ..++.++|+||+|+++|++++|..||....   .......   ........      ...+.
T Consensus       227 ~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (352)
T 2jii_A          227 PHEGDLEFISMDLHKG--CGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSE  304 (352)
T ss_dssp             TTCSCTTTCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCH
T ss_pred             cccCCccccCHHHHcc--CCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcH
Confidence            3489999999999987  458999999999999999999999997642   1111111   11111111      24689


Q ss_pred             HHHHHHHHHcccCCCCCCCHHHHhh
Q 032788           85 DARDFILKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        85 ~~~~~~~~~l~~~p~~R~s~~~~l~  109 (133)
                      .+.+++..||..||.+||+++++++
T Consensus       305 ~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          305 TLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             HHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHHHhCChhhCCCHHHHHH
Confidence            9999999999999999999998865

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.60  E-value=2.3e-15  Score=110.84  Aligned_cols=90  Identities=22%  Similarity=0.444  Sum_probs=75.3

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..||+.|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+..+.....+..++..+.+++.+||
T Consensus       552 ~~~t~~y~aPE~~~~--~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l  629 (656)
T 2j0j_A          552 GKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCW  629 (656)
T ss_dssp             --CCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             CCCCcceeCHHHhcC--CCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHc
Confidence            466788999999987  458999999999999999986 889997654  445556666666677889999999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032788           95 QVNPNDRPTAAQLME  109 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~  109 (133)
                      ..||.+||++.++++
T Consensus       630 ~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          630 AYDPSRRPRFTELKA  644 (656)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             CCChhHCcCHHHHHH
Confidence            999999999999875

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.60  E-value=2e-16  Score=106.66  Aligned_cols=88  Identities=16%  Similarity=0.248  Sum_probs=69.1

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-------HHHHHHHhCCCCCCCCCCCHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-------WALFKIARGELPPIPDSVSRDARDF   89 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~   89 (133)
                      ..+||+.|+|||.+.+  ..++.++|+||+|+++|++++|..|+....       .........   ..+..++..+.++
T Consensus       181 ~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~l  255 (310)
T 3s95_A          181 TVVGNPYWMAPEMING--RSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR---YCPPNCPPSFFPI  255 (310)
T ss_dssp             CCCSCGGGCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH---TCCTTCCTTHHHH
T ss_pred             ccCCCcceeCHHHhcC--CCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc---cCCCCCCHHHHHH
Confidence            5689999999999987  458999999999999999999988875421       011111111   2345677889999


Q ss_pred             HHHHcccCCCCCCCHHHHhh
Q 032788           90 ILKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        90 ~~~~l~~~p~~R~s~~~~l~  109 (133)
                      +.+||..||.+||+++++++
T Consensus       256 i~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          256 TVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             HHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHccCChhhCcCHHHHHH
Confidence            99999999999999999875

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.60  E-value=1.1e-15  Score=103.71  Aligned_cols=94  Identities=21%  Similarity=0.244  Sum_probs=54.9

Q ss_pred             cccccccccccccccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           17 WHVSRWNSLTDQVVNS-KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~-~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ..+||+.|+|||.+.. ....++.++|+||+|+++|++++|..||....... .................+.+++..||.
T Consensus       209 ~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~  287 (337)
T 3ll6_A          209 TRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR-IVNGKYSIPPHDTQYTVFHSLIRAMLQ  287 (337)
T ss_dssp             ---------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------------CCCCTTCCSSGGGHHHHHHHSC
T ss_pred             cccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH-hhcCcccCCcccccchHHHHHHHHHcc
Confidence            4579999999999842 11447889999999999999999999997644211 111222223345566788999999999


Q ss_pred             cCCCCCCCHHHHhhCC
Q 032788           96 VNPNDRPTAAQLMEHP  111 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~~  111 (133)
                      .||.+||++++++++.
T Consensus       288 ~~p~~Rps~~e~l~~l  303 (337)
T 3ll6_A          288 VNPEERLSIAEVVHQL  303 (337)
T ss_dssp             SSGGGSCCHHHHHHHH
T ss_pred             CChhhCcCHHHHHHHH
Confidence            9999999999998763

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.59  E-value=1.7e-15  Score=101.00  Aligned_cols=91  Identities=26%  Similarity=0.533  Sum_probs=71.8

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHh-CCCCCCCCCCCHHHHHHHHHH
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIAR-GELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ..+|..|+|||.+..  ..++.++|+||+|+++|++++ |..||.+..  .....+.. ......+..++..+.+++..|
T Consensus       184 ~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  261 (291)
T 1u46_A          184 RKVPFAWCAPESLKT--RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQC  261 (291)
T ss_dssp             --CCGGGCCHHHHHH--CEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHH
T ss_pred             CCCCceeeCchhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcCHHHHHHHHHH
Confidence            467778999999987  347899999999999999999 999997654  23333322 233344567889999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032788           94 LQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~  110 (133)
                      |..||.+||++.+++++
T Consensus       262 l~~~p~~Rps~~~l~~~  278 (291)
T 1u46_A          262 WAHKPEDRPTFVALRDF  278 (291)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             ccCCcccCcCHHHHHHH
Confidence            99999999999999863

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.59  E-value=1.4e-15  Score=103.31  Aligned_cols=91  Identities=20%  Similarity=0.375  Sum_probs=73.5

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----------------HHHHHHHhCCCCCCCC
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----------------WALFKIARGELPPIPD   80 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----------------~~~~~~~~~~~~~~~~   80 (133)
                      ..||..|+|||.+.+  ..++.++|+||+|+++|++++|..||....                 .....+..+.....+.
T Consensus       190 ~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (327)
T 3lxl_A          190 GQSPIFWYAPESLSD--NIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPP  267 (327)
T ss_dssp             CCSCGGGSCHHHHHH--CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCT
T ss_pred             CCccccccCHHHhcc--CCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCCCC
Confidence            467888999999987  448999999999999999999998886532                 1122334445555677


Q ss_pred             CCCHHHHHHHHHHcccCCCCCCCHHHHhhC
Q 032788           81 SVSRDARDFILKCLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        81 ~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~  110 (133)
                      .++..+.+++..||..||.+||++++++++
T Consensus       268 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          268 ACPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            889999999999999999999999999653

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.59  E-value=1.5e-15  Score=103.33  Aligned_cols=91  Identities=11%  Similarity=0.102  Sum_probs=68.4

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHHHHHHhCCC---CC-CCCCCCHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WALFKIARGEL---PP-IPDSVSRDA   86 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~~~~~~~~~---~~-~~~~~~~~~   86 (133)
                      ...+||+.|+|||++.+  ..++.++|+||+|+++|++++|..||.+..     .....+.....   .. .....+ .+
T Consensus       175 ~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p-~~  251 (330)
T 2izr_A          175 KSLTGTARYMSINTHLG--KEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP-EM  251 (330)
T ss_dssp             CCCCSCTTTCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCH-HH
T ss_pred             CCcCCCccccChHHHcC--CCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccCh-HH
Confidence            35689999999999987  458999999999999999999999997632     22222211111   00 112233 89


Q ss_pred             HHHHHHHcccCCCCCCCHHHHhh
Q 032788           87 RDFILKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        87 ~~~~~~~l~~~p~~R~s~~~~l~  109 (133)
                      .+++..||..+|.+||+++++.+
T Consensus       252 ~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          252 ATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCCHHHHHH
Confidence            99999999999999999988765

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.59  E-value=3.3e-15  Score=100.22  Aligned_cols=91  Identities=16%  Similarity=0.277  Sum_probs=67.0

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC----CCCCCCHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP----IPDSVSRDARDF   89 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~~~   89 (133)
                      ...+||+.|+|||.+..  ..++.++|+||+|+++|++++|..||.+..  ...........+.    .+..++..+.++
T Consensus       170 ~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  247 (294)
T 4eqm_A          170 NHVLGTVQYFSPEQAKG--EATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNV  247 (294)
T ss_dssp             -----CCSSCCHHHHHT--CCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHH
T ss_pred             CccccCccccCHhHhcC--CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHH
Confidence            34579999999999987  448899999999999999999999998764  2222222232222    245678999999


Q ss_pred             HHHHcccCCCCCC-CHHHHh
Q 032788           90 ILKCLQVNPNDRP-TAAQLM  108 (133)
Q Consensus        90 ~~~~l~~~p~~R~-s~~~~l  108 (133)
                      +.+|+..||.+|+ +++++.
T Consensus       248 i~~~l~~dp~~R~~~~~~l~  267 (294)
T 4eqm_A          248 ILRATEKDKANRYKTIQEMK  267 (294)
T ss_dssp             HHHHSCSSGGGSCSSHHHHH
T ss_pred             HHHHhcCCHhHccccHHHHH
Confidence            9999999999999 555444

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.59  E-value=2.3e-15  Score=101.91  Aligned_cols=90  Identities=23%  Similarity=0.358  Sum_probs=73.0

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH-----------------HHHHHHhCCCCCCCC
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-----------------ALFKIARGELPPIPD   80 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~-----------------~~~~~~~~~~~~~~~   80 (133)
                      ..||..|+|||.+..  ..++.++|+||+|+++|++++|..||.....                 ....+..+.....+.
T Consensus       197 ~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (318)
T 3lxp_A          197 GDSPVFWYAPECLKE--YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPD  274 (318)
T ss_dssp             CCCCGGGCCHHHHHH--CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCT
T ss_pred             CCCCceeeChHHhcC--CCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCc
Confidence            467888999999987  4488999999999999999999999865321                 122233444556677


Q ss_pred             CCCHHHHHHHHHHcccCCCCCCCHHHHhh
Q 032788           81 SVSRDARDFILKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        81 ~~~~~~~~~~~~~l~~~p~~R~s~~~~l~  109 (133)
                      .++..+.+++..||..||.+||+++++++
T Consensus       275 ~~~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          275 KCPAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            88999999999999999999999999875

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.59  E-value=1.8e-15  Score=108.02  Aligned_cols=91  Identities=13%  Similarity=0.142  Sum_probs=70.3

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHHHHHH----hCCCCCCCCCCCHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WALFKIA----RGELPPIPDSVSRDAR   87 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~~~~~----~~~~~~~~~~~~~~~~   87 (133)
                      ..+||+.|++||.+.+  ..++.++||||+|+++|++++|..||.+..     ..+..+.    ..........++.++.
T Consensus       172 ~~~gt~~Y~aPE~~~~--~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~  249 (483)
T 3sv0_A          172 NLTGTARYASVNTHLG--IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFA  249 (483)
T ss_dssp             CCCSCTTTCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHH
T ss_pred             ccCCCccccCHHHhcC--CCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHH
Confidence            5689999999999987  458999999999999999999999997632     1121111    1111122346788999


Q ss_pred             HHHHHHcccCCCCCCCHHHHhh
Q 032788           88 DFILKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        88 ~~~~~~l~~~p~~R~s~~~~l~  109 (133)
                      +++..||..+|.+||+++++++
T Consensus       250 ~li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          250 SYFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             HHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHhcCChhhCcCHHHHHH
Confidence            9999999999999999987654

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.58  E-value=6.4e-15  Score=99.38  Aligned_cols=91  Identities=21%  Similarity=0.308  Sum_probs=67.6

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH-HHHHHHhCCCC---CCCCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-ALFKIARGELP---PIPDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~   92 (133)
                      ...|++.|+|||.+..  ..++.++|+||+|+++|++++|..||.+... ...........   ..+..++..+.+++.+
T Consensus       194 ~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  271 (309)
T 2h34_A          194 NTVGTLYYMAPERFSE--SHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAVIAR  271 (309)
T ss_dssp             ---CCGGGCCGGGTCC------CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHHHHHH
T ss_pred             ccCCCcCccCHHHHcC--CCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHHHHHH
Confidence            4578999999999987  4488899999999999999999999987652 22222222221   2345678899999999


Q ss_pred             HcccCCCCCC-CHHHHhh
Q 032788           93 CLQVNPNDRP-TAAQLME  109 (133)
Q Consensus        93 ~l~~~p~~R~-s~~~~l~  109 (133)
                      ||..||.+|| +++++++
T Consensus       272 ~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          272 GMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             HTCSSGGGSCSSHHHHHH
T ss_pred             hccCCHHHHHHhHHHHHH
Confidence            9999999999 8888765

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.58  E-value=2.2e-15  Score=100.88  Aligned_cols=92  Identities=22%  Similarity=0.378  Sum_probs=66.2

Q ss_pred             cccccccccccccccCCC----CCCchhHHHHHHHHHHHHHhC----------CCCCCChH------HHHHHHH--hCCC
Q 032788           18 HVSRWNSLTDQVVNSKNG----GYGLPADIWSVGCTVLEMLTR----------CRPYFGVE------WALFKIA--RGEL   75 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~----~~~~~~diws~g~~~~~l~~~----------~~p~~~~~------~~~~~~~--~~~~   75 (133)
                      .+||+.|+|||.+.....    .++.++|+||+|+++|++++|          ..||....      .......  ....
T Consensus       177 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~  256 (301)
T 3q4u_A          177 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQR  256 (301)
T ss_dssp             CCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCC
T ss_pred             cccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCC
Confidence            489999999999986311    244689999999999999999          78875421      2222221  1222


Q ss_pred             CCCCC-----CCCHHHHHHHHHHcccCCCCCCCHHHHhh
Q 032788           76 PPIPD-----SVSRDARDFILKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        76 ~~~~~-----~~~~~~~~~~~~~l~~~p~~R~s~~~~l~  109 (133)
                      +..+.     ..+..+.+++..||..||.+||+++++++
T Consensus       257 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          257 PNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             CCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             CCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence            22222     13467899999999999999999999875

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.57  E-value=1.3e-15  Score=112.09  Aligned_cols=97  Identities=19%  Similarity=0.285  Sum_probs=70.2

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHHHH----------H-HH-----hC-----C
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF----------K-IA-----RG-----E   74 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~~----------~-~~-----~~-----~   74 (133)
                      ...+||+.|+|||.+..  ..++.++|+||+|+++|++++|..||.+......          . ..     .+     .
T Consensus       181 ~~~~gt~~Y~APE~l~~--~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~  258 (676)
T 3qa8_A          181 TEFVGTLQYLAPELLEQ--KKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSS  258 (676)
T ss_dssp             CCCCSCCTTCSSCSSCC--SCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCS
T ss_pred             ccccCCcccCChHHhcc--CCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhcccccccc
Confidence            34589999999999987  4589999999999999999999999965321100          0 00     00     0


Q ss_pred             CCC----CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCC
Q 032788           75 LPP----IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK  114 (133)
Q Consensus        75 ~~~----~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~  114 (133)
                      ..+    .....+..+.+++..||..||.+||+++++++|+||.
T Consensus       259 ~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~  302 (676)
T 3qa8_A          259 VLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQ  302 (676)
T ss_dssp             SSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHH
T ss_pred             ccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHH
Confidence            000    1122457899999999999999999999999999986

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.56  E-value=3e-15  Score=101.70  Aligned_cols=92  Identities=22%  Similarity=0.319  Sum_probs=65.6

Q ss_pred             ccccccccccccccccCCCCCCc------hhHHHHHHHHHHHHHhC----------CCCCCChH------HHHHHHH--h
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGL------PADIWSVGCTVLEMLTR----------CRPYFGVE------WALFKIA--R   72 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~------~~diws~g~~~~~l~~~----------~~p~~~~~------~~~~~~~--~   72 (133)
                      ..+||+.|+|||.+...  .+..      ++|+||+|+++|++++|          ..||....      .......  .
T Consensus       205 ~~~gt~~y~aPE~~~~~--~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  282 (337)
T 3mdy_A          205 TRVGTKRYMPPEVLDES--LNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIK  282 (337)
T ss_dssp             SSCSCGGGCCHHHHTTC--CCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTS
T ss_pred             CCccCcceeChhhcccc--cCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhh
Confidence            45899999999999863  2333      49999999999999999          66665421      1222211  1


Q ss_pred             CCCCCCCC-----CCCHHHHHHHHHHcccCCCCCCCHHHHhhC
Q 032788           73 GELPPIPD-----SVSRDARDFILKCLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        73 ~~~~~~~~-----~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~  110 (133)
                      ...+..+.     .++..+.+++..||..||.+||++.+++++
T Consensus       283 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          283 KLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             CCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             ccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence            22222222     344678999999999999999999999875

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.56  E-value=8.7e-15  Score=98.09  Aligned_cols=91  Identities=21%  Similarity=0.369  Sum_probs=72.6

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----------------HHHHHHHhCCCCCCC
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----------------WALFKIARGELPPIP   79 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----------------~~~~~~~~~~~~~~~   79 (133)
                      ...||..|+|||.+..  ..++.++|+||+|+++|++++|..|+....                 .....+..+.....+
T Consensus       188 ~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (302)
T 4e5w_A          188 DRDSPVFWYAPECLMQ--SKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCP  265 (302)
T ss_dssp             CTTCCGGGCCHHHHHH--CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCC
T ss_pred             CCCCCccccCCeeecC--CCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCC
Confidence            3477888999999987  448899999999999999999887753321                 222334445555667


Q ss_pred             CCCCHHHHHHHHHHcccCCCCCCCHHHHhh
Q 032788           80 DSVSRDARDFILKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        80 ~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~  109 (133)
                      ..++..+.+++.+||..||.+||+++++++
T Consensus       266 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          266 PNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             TTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             CCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            788999999999999999999999999875

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.55  E-value=3.3e-15  Score=101.25  Aligned_cols=92  Identities=18%  Similarity=0.314  Sum_probs=67.3

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH------HHHHHHHhCCCCC----------C---
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE------WALFKIARGELPP----------I---   78 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~------~~~~~~~~~~~~~----------~---   78 (133)
                      ..||+.|+|||.+..  ..++.++|+||+|+++|++++|..||....      .............          .   
T Consensus       195 ~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (326)
T 3uim_A          195 VRGTIGHIAPEYLST--GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGN  272 (326)
T ss_dssp             CCSCGGGCCHHHHHH--SEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTS
T ss_pred             ccCCcCccCHHHhcc--CCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccc
Confidence            469999999999987  348999999999999999999999996321      0111111111100          0   


Q ss_pred             -CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCC
Q 032788           79 -PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHP  111 (133)
Q Consensus        79 -~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~  111 (133)
                       +......+.+++..||..||.+||++.+++++-
T Consensus       273 ~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L  306 (326)
T 3uim_A          273 YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML  306 (326)
T ss_dssp             CCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHh
Confidence             111235788999999999999999999999874

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.55  E-value=7.3e-15  Score=99.71  Aligned_cols=90  Identities=18%  Similarity=0.264  Sum_probs=71.2

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH------------------HHHHHHhCCCCCCC
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW------------------ALFKIARGELPPIP   79 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~------------------~~~~~~~~~~~~~~   79 (133)
                      ..++..|+|||.+..  ..++.++|+||+|+++|++++|..|+.....                  ....+........+
T Consensus       208 ~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (326)
T 2w1i_A          208 GESPIFWYAPESLTE--SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP  285 (326)
T ss_dssp             CSCCGGGCCHHHHHH--CEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCC
T ss_pred             CCCceeEECchhhcC--CCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCC
Confidence            356778999999987  3488999999999999999999888764321                  11222333444556


Q ss_pred             CCCCHHHHHHHHHHcccCCCCCCCHHHHhh
Q 032788           80 DSVSRDARDFILKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        80 ~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~  109 (133)
                      ..++..+.+++..||..||.+||+++++++
T Consensus       286 ~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          286 DGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             TTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            778999999999999999999999999875

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.54  E-value=1.2e-15  Score=103.43  Aligned_cols=91  Identities=21%  Similarity=0.370  Sum_probs=66.9

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---------HHHHHHHhCCC-----CCCC----
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---------WALFKIARGEL-----PPIP----   79 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---------~~~~~~~~~~~-----~~~~----   79 (133)
                      ..||+.|+|||.+..  ..++.++|+||+|+++|++++|..||....         +.......+..     +...    
T Consensus       201 ~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (321)
T 2qkw_B          201 VKGTLGYIDPEYFIK--GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIR  278 (321)
T ss_dssp             CEEETTTCCHHHHHH--CBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSC
T ss_pred             cCCCccccCHHHhcC--CCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccC
Confidence            468999999999987  448999999999999999999999986532         11111111111     1111    


Q ss_pred             CCCCHHHHHHHHHHcccCCCCCCCHHHHhhC
Q 032788           80 DSVSRDARDFILKCLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        80 ~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~  110 (133)
                      ...+..+.+++.+||..||.+||++.+++++
T Consensus       279 ~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  309 (321)
T 2qkw_B          279 PESLRKFGDTAVKCLALSSEDRPSMGDVLWK  309 (321)
T ss_dssp             HHHHHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            1234568899999999999999999999875

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.54  E-value=4.3e-15  Score=100.80  Aligned_cols=92  Identities=17%  Similarity=0.227  Sum_probs=64.6

Q ss_pred             cccccccccccccccCC---CCCCchhHHHHHHHHHHHHHhCCCCCCChH-----------------HHHH-HHHhC-CC
Q 032788           18 HVSRWNSLTDQVVNSKN---GGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----------------WALF-KIARG-EL   75 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~---~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----------------~~~~-~~~~~-~~   75 (133)
                      .+||+.|+|||.+....   ..++.++|+||+|+++|++++|..||.+..                 .... ..... ..
T Consensus       193 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (322)
T 3soc_A          193 QVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKR  272 (322)
T ss_dssp             CCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCC
T ss_pred             CccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCC
Confidence            58999999999987521   124568899999999999999999886421                 1111 11111 11


Q ss_pred             CCCCC-----CCCHHHHHHHHHHcccCCCCCCCHHHHhh
Q 032788           76 PPIPD-----SVSRDARDFILKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        76 ~~~~~-----~~~~~~~~~~~~~l~~~p~~R~s~~~~l~  109 (133)
                      +..+.     .....+.+++.+||..||.+||+++++++
T Consensus       273 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          273 PVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             CCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            11111     12345899999999999999999999876

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.52  E-value=3.5e-15  Score=101.44  Aligned_cols=99  Identities=18%  Similarity=0.293  Sum_probs=66.6

Q ss_pred             ccccccccccccccccCC-----CCCCchhHHHHHHHHHHHHHhCCCCCCChH-------------------HHHHHHH-
Q 032788           17 WHVSRWNSLTDQVVNSKN-----GGYGLPADIWSVGCTVLEMLTRCRPYFGVE-------------------WALFKIA-   71 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~-----~~~~~~~diws~g~~~~~l~~~~~p~~~~~-------------------~~~~~~~-   71 (133)
                      ..+||+.|+|||++.+..     ..++.++||||+|+++|++++|..|+....                   ....... 
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (336)
T 3g2f_A          187 SEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVS  266 (336)
T ss_dssp             CTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHT
T ss_pred             cCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhc
Confidence            457999999999987521     124568999999999999999866653210                   1111111 


Q ss_pred             -hCCCCCCCCC------CCHHHHHHHHHHcccCCCCCCCHHHHhh------CCCCCC
Q 032788           72 -RGELPPIPDS------VSRDARDFILKCLQVNPNDRPTAAQLME------HPFVKR  115 (133)
Q Consensus        72 -~~~~~~~~~~------~~~~~~~~~~~~l~~~p~~R~s~~~~l~------~~~~~~  115 (133)
                       ....+..+..      .+..+.+++.+||..||.+||+++++++      ++|.++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~  323 (336)
T 3g2f_A          267 REKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERN  323 (336)
T ss_dssp             TSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred             ccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhc
Confidence             1222222322      2347999999999999999999999854      556554

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.52  E-value=5.8e-15  Score=99.22  Aligned_cols=91  Identities=15%  Similarity=0.210  Sum_probs=66.8

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHH-HHHHhC----------CCCCCCC
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WAL-FKIARG----------ELPPIPD   80 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~-~~~~~~----------~~~~~~~   80 (133)
                      ...||+.|+|||.+.+   .++.++|+||+|+++|++++|..||....     ..+ ......          .....+.
T Consensus       194 ~~~g~~~y~aPE~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (307)
T 2nru_A          194 RIVGTTAYMAPEALRG---EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADS  270 (307)
T ss_dssp             SCCSCGGGCCHHHHTT---EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCH
T ss_pred             ccCCCcCcCChHHhcC---CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccch
Confidence            3578999999999875   37889999999999999999999987532     111 111111          1111122


Q ss_pred             CCCHHHHHHHHHHcccCCCCCCCHHHHhhC
Q 032788           81 SVSRDARDFILKCLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        81 ~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~  110 (133)
                      ..+..+.+++..||..+|.+||++++++++
T Consensus       271 ~~~~~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          271 TSVEAMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             HHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            334678899999999999999999998864

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.49  E-value=1.8e-14  Score=98.09  Aligned_cols=94  Identities=20%  Similarity=0.284  Sum_probs=66.2

Q ss_pred             ccccccccccccccccCCC----CCCchhHHHHHHHHHHHHHhC----------CCCCCChH------HHHH-HHHhC-C
Q 032788           17 WHVSRWNSLTDQVVNSKNG----GYGLPADIWSVGCTVLEMLTR----------CRPYFGVE------WALF-KIARG-E   74 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~----~~~~~~diws~g~~~~~l~~~----------~~p~~~~~------~~~~-~~~~~-~   74 (133)
                      ...||+.|+|||.+.....    .++.++|+||+|+++|++++|          ..||....      .... .+... .
T Consensus       210 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  289 (342)
T 1b6c_B          210 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKL  289 (342)
T ss_dssp             SCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCC
T ss_pred             cCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHh
Confidence            4489999999999976311    123689999999999999998          67775531      2222 22222 2


Q ss_pred             CCCCCC-----CCCHHHHHHHHHHcccCCCCCCCHHHHhhC
Q 032788           75 LPPIPD-----SVSRDARDFILKCLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        75 ~~~~~~-----~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~  110 (133)
                      .+..+.     .....+.+++..||..||.+||++++++++
T Consensus       290 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          290 RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             CCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             CCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence            222222     223578899999999999999999999875

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.48  E-value=1.9e-14  Score=100.19  Aligned_cols=94  Identities=16%  Similarity=0.217  Sum_probs=68.2

Q ss_pred             hccccccccccccccccC------CCCCCchhHHHHHHHHHHHHHhCCCCCCCh------HHHHHHHHhCCCCCC-----
Q 032788           16 KWHVSRWNSLTDQVVNSK------NGGYGLPADIWSVGCTVLEMLTRCRPYFGV------EWALFKIARGELPPI-----   78 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~------~~~~~~~~diws~g~~~~~l~~~~~p~~~~------~~~~~~~~~~~~~~~-----   78 (133)
                      ...+||+.|+|||.+...      ...++.++|+||+|+++|++++|..||...      ......+..+.....     
T Consensus       173 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  252 (396)
T 4eut_A          173 VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQ  252 (396)
T ss_dssp             SCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEE
T ss_pred             ccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhhe
Confidence            345899999999998631      012678999999999999999999998532      134444444432211     


Q ss_pred             ---------------C----CCCCHHHHHHHHHHcccCCCCCCCHHHHhh
Q 032788           79 ---------------P----DSVSRDARDFILKCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        79 ---------------~----~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~  109 (133)
                                     .    ......+.+++.+||..||.+|+++.++++
T Consensus       253 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~  302 (396)
T 4eut_A          253 KAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA  302 (396)
T ss_dssp             CSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             eccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence                           1    123356789999999999999999998855

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.47  E-value=2.7e-14  Score=95.86  Aligned_cols=81  Identities=22%  Similarity=0.475  Sum_probs=60.0

Q ss_pred             CCCchhHHHHHHHHHHHHHhCCCCCCChHHHHH--HHHhC---CCCCCC----CCCCHHHHHHHHHHcccCCCCCCCHHH
Q 032788           36 GYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF--KIARG---ELPPIP----DSVSRDARDFILKCLQVNPNDRPTAAQ  106 (133)
Q Consensus        36 ~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~~--~~~~~---~~~~~~----~~~~~~~~~~~~~~l~~~p~~R~s~~~  106 (133)
                      .++.++|+||+|+++|++++|..||.+......  .....   .....+    ..++..+.+++.+||..||.+||++++
T Consensus       174 ~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e  253 (299)
T 3m2w_A          174 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITE  253 (299)
T ss_dssp             GGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             cCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHH
Confidence            478899999999999999999999976542111  00000   001111    457889999999999999999999999


Q ss_pred             HhhCCCCCCC
Q 032788          107 LMEHPFVKRP  116 (133)
Q Consensus       107 ~l~~~~~~~~  116 (133)
                      +++||||...
T Consensus       254 ~l~hp~~~~~  263 (299)
T 3m2w_A          254 FMNHPWIMQS  263 (299)
T ss_dssp             HHTSHHHHTG
T ss_pred             HhcChhhccc
Confidence            9999999764

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.33  E-value=1.3e-13  Score=94.94  Aligned_cols=87  Identities=14%  Similarity=0.027  Sum_probs=62.6

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ...+||+.|+|||++.+  ..++.++|+||+|+++|+|++|..||......... ......  .........+++..|+.
T Consensus       243 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~l~  317 (365)
T 3e7e_A          243 TAKCETSGFQCVEMLSN--KPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK-PEGLFR--RLPHLDMWNEFFHVMLN  317 (365)
T ss_dssp             CCSSCTTSCCCHHHHTT--CCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE-ECSCCT--TCSSHHHHHHHHHHHHC
T ss_pred             eeecCCCCCCChHHhcC--CCCCccccHHHHHHHHHHHHhCCCccccCCCCcee-echhcc--ccCcHHHHHHHHHHHcC
Confidence            34589999999999988  44899999999999999999999998643211000 001111  11235677889999999


Q ss_pred             cCCCCCC-CHHHH
Q 032788           96 VNPNDRP-TAAQL  107 (133)
Q Consensus        96 ~~p~~R~-s~~~~  107 (133)
                      .+|.+|+ +++++
T Consensus       318 ~~p~~r~~~~~~l  330 (365)
T 3e7e_A          318 IPDCHHLPSLDLL  330 (365)
T ss_dssp             CCCTTCCCCHHHH
T ss_pred             CCCCCcchHHHHH
Confidence            9999995 44443

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.25  E-value=3e-12  Score=87.15  Aligned_cols=102  Identities=16%  Similarity=0.169  Sum_probs=69.8

Q ss_pred             hhhchhhhhh--hhccccccccccccccccCCCCCCchhHHHHHHHH-HHHHHhCCCCCCChHH---HHHHHHhCCC-CC
Q 032788            5 TVEGLGNALR--RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCT-VLEMLTRCRPYFGVEW---ALFKIARGEL-PP   77 (133)
Q Consensus         5 ~~~~~~~~~~--~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~-~~~l~~~~~p~~~~~~---~~~~~~~~~~-~~   77 (133)
                      .+.+|+.+..  ....+||+.|+|||++.+.   .+.++||||++++ .++++.|..||.+..+   ....+..... ..
T Consensus       222 kL~DFG~a~~~~~~~~~gt~~y~aPE~~~g~---~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  298 (336)
T 2vuw_A          222 SIIDYTLSRLERDGIVVFCDVSMDEDLFTGD---GDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKT  298 (336)
T ss_dssp             EECCCTTCBEEETTEEECCCCTTCSGGGCCC---SSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSS
T ss_pred             EEeeccccEecCCCcEEEeecccChhhhcCC---CccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCc
Confidence            3445554432  3456899999999999863   3889999998766 6677888888855321   2222222211 11


Q ss_pred             C-----CCCCCHHHHHHHHHHcccCCCCCCCHHHHh-hCCCCC
Q 032788           78 I-----PDSVSRDARDFILKCLQVNPNDRPTAAQLM-EHPFVK  114 (133)
Q Consensus        78 ~-----~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l-~~~~~~  114 (133)
                      .     +..++.++.+++.+||..|     |++|++ +||||+
T Consensus       299 ~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          299 KCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             ccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence            1     1235678999999999976     999999 999985

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.23  E-value=7.1e-13  Score=98.02  Aligned_cols=89  Identities=15%  Similarity=0.116  Sum_probs=66.1

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHHHHHHHhCCCCCC-CCCCCHHHHHHHHHHc
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPI-PDSVSRDARDFILKCL   94 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l   94 (133)
                      ...+||+.|+|||++...   ++.++||||+|+++|++++|..++.+...      ....... ....+..+.+++.+||
T Consensus       235 ~~~~gt~~y~aPE~~~~~---~~~~sDi~slG~~l~~l~~g~~~~~~~~~------~~~~~~~~~~~~~~~l~~li~~~l  305 (681)
T 2pzi_A          235 GYLYGTPGFQAPEIVRTG---PTVATDIYTVGRTLAALTLDLPTRNGRYV------DGLPEDDPVLKTYDSYGRLLRRAI  305 (681)
T ss_dssp             SCCCCCTTTSCTTHHHHC---SCHHHHHHHHHHHHHHHHSCCCEETTEEC------SSCCTTCHHHHHCHHHHHHHHHHT
T ss_pred             CccCCCccccCHHHHcCC---CCCceehhhhHHHHHHHHhCCCCCccccc------ccccccccccccCHHHHHHHhhhc
Confidence            345899999999999763   48899999999999999999887754210      0000000 0123467899999999


Q ss_pred             ccCCCCCCCHHHHhhCCCC
Q 032788           95 QVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~~~~  113 (133)
                      ..||.+|++..+.+.++|+
T Consensus       306 ~~dP~~R~~~~~~l~~~l~  324 (681)
T 2pzi_A          306 DPDPRQRFTTAEEMSAQLT  324 (681)
T ss_dssp             CSSGGGSCSSHHHHHHHHH
T ss_pred             cCChhhCCCHHHHHHHHHH
Confidence            9999999987777777655

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.12  E-value=1e-11  Score=83.10  Aligned_cols=73  Identities=16%  Similarity=0.184  Sum_probs=54.1

Q ss_pred             CCchhHHHHHHHHHHHHHhCCCCCCChHH--HH---HHHHhCCCC---CCCCCCCHHHHHHHHHHcccCCCCCCCHHHHh
Q 032788           37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--AL---FKIARGELP---PIPDSVSRDARDFILKCLQVNPNDRPTAAQLM  108 (133)
Q Consensus        37 ~~~~~diws~g~~~~~l~~~~~p~~~~~~--~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l  108 (133)
                      ++.++|+||+|+++|++++|..||.+...  .+   .........   .....++..+.+++.+||..||.+| ++++++
T Consensus       179 ~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~  257 (286)
T 3uqc_A          179 ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLL  257 (286)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHH
Confidence            68899999999999999999999976431  01   000011111   1134678899999999999999999 999987


Q ss_pred             hC
Q 032788          109 EH  110 (133)
Q Consensus       109 ~~  110 (133)
                      +.
T Consensus       258 ~~  259 (286)
T 3uqc_A          258 NL  259 (286)
T ss_dssp             HH
T ss_pred             HH
Confidence            63

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=95.91  E-value=0.00022  Score=52.05  Aligned_cols=37  Identities=5%  Similarity=-0.022  Sum_probs=15.9

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHh
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT   55 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~   55 (133)
                      ++.+||+.|++||++.++   +...+|+|++|++.+++..
T Consensus       397 ~t~vGTp~YmAPE~l~g~---~~~~~d~~s~g~~~~~l~~  433 (569)
T 4azs_A          397 TNLVQSFFVFVNELFAEN---KSWNGFWRSAPVHPFNLPQ  433 (569)
T ss_dssp             HHHHHHHHHHHHHHC--------------------CCCCT
T ss_pred             cCceechhhccHHHhCCC---CCCcccccccccchhhhcc
Confidence            456999999999999863   5778999999998665543

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=94.03  E-value=0.27  Score=31.68  Aligned_cols=67  Identities=10%  Similarity=0.007  Sum_probs=40.6

Q ss_pred             cccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHccc-------
Q 032788           24 SLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV-------   96 (133)
Q Consensus        24 ~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------   96 (133)
                      +.+||...   ...+.+.-|+|+|+++|..+.-..                ....+..++..+..++..|...       
T Consensus       103 ~~~pe~~~---~~~te~~~IysLG~tLY~ALDygL----------------~e~eE~eLS~~LE~LL~~Mt~~~~d~~~~  163 (229)
T 2yle_A          103 PVAGKLGY---SQCMETEVIESLGIIIYKALDYGL----------------KENEERELSPPLEQLIDHMANTVEADGSN  163 (229)
T ss_dssp             ----CCSS---SSSCHHHHHHHHHHHHHHHHTTTC----------------CTTEEECCCHHHHHHHHHHTTCCC-----
T ss_pred             CCChhhcc---ccchHHHHHHHHHHHHHHHhhcCC----------------CcccchhhCHHHHHHHHHHHhcccccccc
Confidence            45665553   124678899999999998765322                2223445666666666666544       


Q ss_pred             ------------------CCCCCCCHHHHhh
Q 032788           97 ------------------NPNDRPTAAQLME  109 (133)
Q Consensus        97 ------------------~p~~R~s~~~~l~  109 (133)
                                        .+..|.+++++++
T Consensus       164 DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~  194 (229)
T 2yle_A          164 DEGYEAAEEGLGDEDEKRKISAIRSYRDVMK  194 (229)
T ss_dssp             ---------------CCSCCCCCCSHHHHHH
T ss_pred             cccccccccccccccccccccCcCCHHHHHH
Confidence                              3457788888765

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=93.44  E-value=0.004  Score=45.19  Aligned_cols=45  Identities=20%  Similarity=0.242  Sum_probs=33.7

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCC
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPY   60 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~   60 (133)
                      ...+||+.|+|||++......|+..+|+|+...-..+....+.+|
T Consensus       494 ~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          494 KAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             hhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            467999999999999852223777889999887777666655544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	133
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	6e-28
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-27
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-27
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-26
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	4e-26
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-25
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	3e-25
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	5e-25
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-24
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-24
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-24
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	9e-24
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-23
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	7e-23
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-22
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-22
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	4e-22
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-21
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-21
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-21
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	6e-21
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-20
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-20
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-20
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-20
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-20
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-20
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-20
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	3e-20
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-20
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-20
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	5e-20
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	9e-20
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-19
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-19
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-19
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-19
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-19
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-19
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-19
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	4e-19
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	7e-19
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	8e-19
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-18
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-18
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	4e-18
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	6e-18
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	9e-18
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-17
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	4e-17
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	6e-17
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-16
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	7e-16
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-15
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-15
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-15
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-14
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-14
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	7e-14
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	6e-13
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	8e-13
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-12

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (254), Expect = 6e-28
 Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 4/92 (4%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPI--PDSVSRDARD 88
               YG   DIWS+G   +EM+    PY       AL+ IA    P +  P+ +S   RD
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRD 248

Query: 89  FILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 120
           F+ +CL ++   R +A +L++H F+K   P S
Sbjct: 249 FLNRCLDMDVEKRGSAKELLQHQFLKIAKPLS 280

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  101 bits (253), Expect = 1e-27
 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 3/104 (2%)

Query: 20  SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV--EWALFKIARGELPP 77
           + +    + ++    G Y    D+WS+G T +E+  R  P F +    AL+ IA+ E P 
Sbjct: 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPA 233

Query: 78  I-PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 120
           +     S   R+F+  CLQ  P DRPT+  L++H FV R  P +
Sbjct: 234 LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPT 277

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (250), Expect = 1e-27
 Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 2/83 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA--LFKIARGELPPIPDSVSRDARDFI 90
               Y   +DIWS+GC + E+     P+          KI  G+   IP   S +  + I
Sbjct: 187 NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEII 246

Query: 91  LKCLQVNPNDRPTAAQLMEHPFV 113
            + L +    RP+  +++E+P +
Sbjct: 247 TRMLNLKDYHRPSVEEILENPLI 269

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.4 bits (242), Expect = 3e-26
 Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 4/89 (4%)

Query: 31  NSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA--LFKIARGELP--PIPDSVSRDA 86
            SK+  Y   AD+WS+G T++EM     P+  +     L KIA+ E P    P   S + 
Sbjct: 186 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNF 245

Query: 87  RDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
           +DF+ KCL+ N + R T +QL++HPFV  
Sbjct: 246 KDFLKKCLEKNVDARWTTSQLLQHPFVTV 274

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.4 bits (242), Expect = 4e-26
 Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 5/91 (5%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGEL---PPIPDSVSRDAR 87
           ++       D+WS+G  V  +L+   P+     +  +  I   E          +S +A 
Sbjct: 176 QHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAM 235

Query: 88  DFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 118
           DF+ + L      R TA++ ++HP++K+ + 
Sbjct: 236 DFVDRLLVKERKSRMTASEALQHPWLKQKIE 266

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.7 bits (235), Expect = 2e-25
 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 3/84 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA--LFKIARGELPPIPDSVSRDARDFI 90
           +   +    D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I
Sbjct: 177 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE-FTFPDFVTEGARDLI 235

Query: 91  LKCLQVNPNDRPTAAQLMEHPFVK 114
            + L+ NP+ RP   +++EHP++ 
Sbjct: 236 SRLLKHNPSQRPMLREVLEHPWIT 259

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 94.4 bits (234), Expect = 3e-25
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 5/90 (5%)

Query: 31  NSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA--LFKIARGEL---PPIPDSVSRD 85
           N  + GYG   D+WS G  +  +L    P++  +    L  I  G      P  D  S  
Sbjct: 186 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDT 245

Query: 86  ARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
            +D + + L V P  R TA + + HPF ++
Sbjct: 246 VKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 275

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.9 bits (233), Expect = 5e-25
 Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 4/85 (4%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGELPP-IPDSVSRDARDF 89
              Y    D+++ G  +LEM T   PY           ++  G  P         + ++ 
Sbjct: 186 EEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEI 245

Query: 90  ILKCLQVNPNDRPTAAQLMEHPFVK 114
           I  C++ N ++R +   L+ H F +
Sbjct: 246 IEGCIRQNKDERYSIKDLLNHAFFQ 270

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 93.2 bits (231), Expect = 1e-24
 Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 5/99 (5%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA--LFKIARGEL---PPIPDSVSRDAR 87
               Y    D WS+G     +L    P++    A    +I + E     P  D +S  A+
Sbjct: 182 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 241

Query: 88  DFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTP 126
           DFI   ++ +P  R T  Q ++HP++         +   
Sbjct: 242 DFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQS 280

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.1 bits (228), Expect = 3e-24
 Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 10/102 (9%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGEL---PPIPDSVSRDAR 87
                GL AD+WS+G     +L+   P+ G   +  L  ++            + S  A+
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 248

Query: 88  DFILKCLQVNPNDRPTAAQLMEHPFVK-----RPLPTSWGLP 124
           DFI + L  +P  R T    ++HP++K     + L ++W  P
Sbjct: 249 DFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 290

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.6 bits (227), Expect = 3e-24
 Identities = 16/91 (17%), Positives = 30/91 (32%), Gaps = 4/91 (4%)

Query: 32  SKNGGYGLPADIWSVGCTVLEMLTRCRPYFG----VEWALFKIARGELPPIPDSVSRDAR 87
            +   +  P D+WS G  +  ML    P+       +       +         +     
Sbjct: 178 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 237

Query: 88  DFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 118
             + K L  NP+ R T   + +  +  +PL 
Sbjct: 238 ALLHKILVENPSARITIPDIKKDRWYNKPLK 268

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 91.7 bits (227), Expect = 9e-24
 Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 5/87 (5%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGEL---PPIPDSVSRDAR 87
                G   D+W++G     +L+   P+ G +    L  + R +         SVS +A+
Sbjct: 201 DREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAK 260

Query: 88  DFILKCLQVNPNDRPTAAQLMEHPFVK 114
           DFI   LQ  P  R T    +EHP++K
Sbjct: 261 DFIKNLLQKEPRKRLTVHDALEHPWLK 287

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 91.3 bits (226), Expect = 1e-23
 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 5/88 (5%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGEL---PPIPDSVSRDAR 87
           +    G   D+WSVG     +L+   P+ G   +  L  +   +          +S D +
Sbjct: 198 EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGK 257

Query: 88  DFILKCLQVNPNDRPTAAQLMEHPFVKR 115
           DFI K L  +PN R T  Q +EHP++  
Sbjct: 258 DFIRKLLLADPNTRMTIHQALEHPWLTP 285

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.8 bits (217), Expect = 7e-23
 Identities = 15/81 (18%), Positives = 34/81 (41%), Gaps = 3/81 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGELPPIPDSVSRDARDF 89
           +   +   +D+WS G  + E+ +  R  +    ++  + ++ +G     PD       + 
Sbjct: 173 REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEV 232

Query: 90  ILKCLQVNPNDRPTAAQLMEH 110
           +  C  ++   RP+  QL E 
Sbjct: 233 MKNCWHLDAAMRPSFLQLREQ 253

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.9 bits (215), Expect = 2e-22
 Identities = 20/99 (20%), Positives = 43/99 (43%), Gaps = 8/99 (8%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGELPP----IPD 80
            +       Y   +D+++ G  + E++T   PY      +  +F + RG L P    +  
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRS 236

Query: 81  SVSRDARDFILKCLQVNPNDRPTAAQLMEHP-FVKRPLP 118
           +  +  +  + +CL+   ++RP   Q++     + R LP
Sbjct: 237 NCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 275

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.1 bits (215), Expect = 3e-22
 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 2/84 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALFKIARGELPPIPDSVSRDARDFIL 91
               Y    D WS G  + EML    P+ G  E  LF   R + P  P  + ++A+D ++
Sbjct: 176 LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLV 235

Query: 92  KCLQVNPNDRPTAA-QLMEHPFVK 114
           K     P  R      + +HP  +
Sbjct: 236 KLFVREPEKRLGVRGDIRQHPLFR 259

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.7 bits (214), Expect = 4e-22
 Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 5/91 (5%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGELPPIPDSVSRDARDF 89
             G + + +D+WS G  + E+ T+ R  +        L ++ RG   P P        D 
Sbjct: 187 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL 246

Query: 90  ILKCLQVNPNDRPTAAQLME--HPFVKRPLP 118
           + +C +  P +RPT   L      +     P
Sbjct: 247 MCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 277

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.1 bits (210), Expect = 1e-21
 Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 5/81 (6%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKC 93
           +  +G  A +WS+G  + +M+    P+   E    +I RG++      VS + +  I  C
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIRGQVF-FRQRVSSECQHLIRWC 238

Query: 94  LQVNPNDRPTAAQLMEHPFVK 114
           L + P+DRPT  ++  HP+++
Sbjct: 239 LALRPSDRPTFEEIQNHPWMQ 259

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.3 bits (208), Expect = 2e-21
 Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 3/85 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA--LFKIARGELPPIPDSVSRDARDFI 90
                   +D+W++GC + +++    P+          KI + E    P+     ARD +
Sbjct: 183 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE-YDFPEKFFPKARDLV 241

Query: 91  LKCLQVNPNDRPTAAQLMEHPFVKR 115
            K L ++   R    ++  +  +K 
Sbjct: 242 EKLLVLDATKRLGCEEMEGYGPLKA 266

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.1 bits (207), Expect = 4e-21
 Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGELPPIPDSVSRDARDF 89
           +   +   +D+WS G  + E++TR  P +           + +G     P+       + 
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEV 266

Query: 90  ILKCLQVNPNDRPTAAQLMEH 110
           +LKC       RP+ ++L+  
Sbjct: 267 MLKCWHPKAEMRPSFSELVSR 287

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.0 bits (207), Expect = 6e-21
 Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 9/95 (9%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--------WALFKIARGELP-PIPDSVS 83
               Y    D+WS+G  +  +L    P++               ++ + E P P    VS
Sbjct: 186 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 245

Query: 84  RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 118
            + +  I   L+  P  R T  + M HP++ +   
Sbjct: 246 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 280

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.5 bits (203), Expect = 1e-20
 Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 3/81 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGELPPIPDSVSRDARDF 89
               +   +D+W  G  + E+L      F        + +I  GE  P+P +        
Sbjct: 182 NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSL 241

Query: 90  ILKCLQVNPNDRPTAAQLMEH 110
           + KC   +P+ RP   +L   
Sbjct: 242 MTKCWAYDPSRRPRFTELKAQ 262

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.0 bits (202), Expect = 1e-20
 Identities = 15/81 (18%), Positives = 29/81 (35%), Gaps = 3/81 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGELPPIPDSVSRDARDF 89
               +   +DIW+ G  + E+ +  +  +           IA+G     P   S      
Sbjct: 174 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTI 233

Query: 90  ILKCLQVNPNDRPTAAQLMEH 110
           +  C     ++RPT   L+ +
Sbjct: 234 MYSCWHEKADERPTFKILLSN 254

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.0 bits (202), Expect = 1e-20
 Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 3/81 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGELPPIPDSVSRDARDF 89
               Y   +D+WS G  + E+ +  +  +        +  I+ G     P   S      
Sbjct: 175 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQI 234

Query: 90  ILKCLQVNPNDRPTAAQLMEH 110
           +  C +  P DRP  ++L+  
Sbjct: 235 MNHCWKERPEDRPAFSRLLRQ 255

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.1 bits (202), Expect = 1e-20
 Identities = 14/86 (16%), Positives = 31/86 (36%), Gaps = 6/86 (6%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGELPPIPDSVSRDARDF 89
               +   +D+WS G  + E  +  +  +           + +GE    P    R+  D 
Sbjct: 183 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDL 242

Query: 90  ILKCLQVNPNDRPTAAQL---MEHPF 112
           +  C   +  +RP  A +   + + +
Sbjct: 243 MNLCWTYDVENRPGFAAVELRLRNYY 268

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.6 bits (203), Expect = 2e-20
 Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 10/108 (9%)

Query: 17  WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG-----VEWALFKIA 71
                   +   +V   + G+    D WS+G  + E+LT   P+        +  + +  
Sbjct: 189 DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRI 248

Query: 72  RGELPPIPDSVSRDARDFILKCLQVNPNDRP-----TAAQLMEHPFVK 114
               PP P  +S  A+D I + L  +P  R       A ++ EH F +
Sbjct: 249 LKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQ 296

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.7 bits (201), Expect = 2e-20
 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 4/82 (4%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIAR-GELPPIPDSVSRDARD 88
           K   +   +D W  G T+ EM T  +  +        L KI + GE  P P+   +D  +
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYN 246

Query: 89  FILKCLQVNPNDRPTAAQLMEH 110
            +++C    P DRPT   L + 
Sbjct: 247 VMVQCWAHKPEDRPTFVALRDF 268

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.1 bits (202), Expect = 2e-20
 Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 6/88 (6%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-ALFKIARGELPPIPDSVSRDARDFIL 91
           ++  YG   D W +G  + EM+    P++  +   LF++   E    P ++S +A+  + 
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLA 237

Query: 92  KCLQVNPNDRP-----TAAQLMEHPFVK 114
             L+ +P  R       A ++MEH F  
Sbjct: 238 GLLKKDPKQRLGGGPSDAKEVMEHRFFL 265

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.3 bits (200), Expect = 3e-20
 Identities = 15/88 (17%), Positives = 29/88 (32%), Gaps = 6/88 (6%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGELPPIPDSVSRDARDF 89
               +   +D+WS G T+ E L+  +  +        +  I +G+    P     +    
Sbjct: 185 NFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYAL 244

Query: 90  ILKCLQVNPNDRPTAAQL---MEHPFVK 114
           +  C      DRP    +   M   +  
Sbjct: 245 MSDCWIYKWEDRPDFLTVEQRMRACYYS 272

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.4 bits (200), Expect = 3e-20
 Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGELPPIPDSVSRDARDF 89
            +  Y   +D+WS G  + E+ T     +    VE     +  G     P + + +    
Sbjct: 210 FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMM 269

Query: 90  ILKCLQVNPNDRPTAAQLMEH 110
           +  C    P+ RPT  QL+E 
Sbjct: 270 MRDCWHAVPSQRPTFKQLVED 290

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 81.8 bits (201), Expect = 3e-20
 Identities = 13/80 (16%), Positives = 31/80 (38%), Gaps = 3/80 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIARGELPPIPDSVSRDARDF 89
               Y   +D+W+ G  + E+ +     +     E  ++ +  G +   P++   +  + 
Sbjct: 215 FYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNL 274

Query: 90  ILKCLQVNPNDRPTAAQLME 109
           +  C    P DRP+   +  
Sbjct: 275 MRLCWSKLPADRPSFCSIHR 294

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 81.7 bits (201), Expect = 5e-20
 Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 9/109 (8%)

Query: 15  RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG----VEWALFKI 70
           +       +      V  K   Y   AD +S+GC + ++L    P+       +  + ++
Sbjct: 161 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM 220

Query: 71  ARGELPPIPDSVSRDARDFILKCLQVNPNDRPT-----AAQLMEHPFVK 114
                  +PDS S + R  +   LQ + N R       A ++ E PF +
Sbjct: 221 TLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 269

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.7 bits (196), Expect = 9e-20
 Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 6/86 (6%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGELPPIPDSVSRDARDF 89
             G + + +D+WS G  + E++T  R  +        +  + RG     PD+   +    
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 242

Query: 90  ILKCLQVNPNDRPTAAQLM---EHPF 112
           +  C +  P DRPT   L    E  F
Sbjct: 243 MRLCWKERPEDRPTFDYLRSVLEDFF 268

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.2 bits (197), Expect = 1e-19
 Identities = 16/81 (19%), Positives = 34/81 (41%), Gaps = 3/81 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGELPPIPDSVSRDARDF 89
               Y   +D+WS G  + E+++     +          K+ +G     P +   +  D 
Sbjct: 199 NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDL 258

Query: 90  ILKCLQVNPNDRPTAAQLMEH 110
           + +C +  P +RP+ AQ++  
Sbjct: 259 MRQCWREKPYERPSFAQILVS 279

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.8 bits (196), Expect = 2e-19
 Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 3/81 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGELPPIPDSVSRDARDF 89
            +  Y   +D+WS G TV E++T     +           + +GE  P P   + D    
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 245

Query: 90  ILKCLQVNPNDRPTAAQLMEH 110
           ++KC  ++ + RP   +L+  
Sbjct: 246 MVKCWMIDADSRPKFRELIIE 266

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.7 bits (196), Expect = 2e-19
 Identities = 29/128 (22%), Positives = 43/128 (33%), Gaps = 45/128 (35%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG------------------------------ 62
           +   Y + +DIWS+G +++EM     P                                 
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 235

Query: 63  --------------VEWALFKIARGELPPIPDS-VSRDARDFILKCLQVNPNDRPTAAQL 107
                         +   L  I     P +P    S + +DF+ KCL  NP +R    QL
Sbjct: 236 PLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295

Query: 108 MEHPFVKR 115
           M H F+KR
Sbjct: 296 MVHAFIKR 303

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.2 bits (194), Expect = 2e-19
 Identities = 24/110 (21%), Positives = 35/110 (31%), Gaps = 28/110 (25%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG----------------------------VE 64
               Y  P D+WSVGC   EM  R   + G                              
Sbjct: 188 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 247

Query: 65  WALFKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
            A    +   +      +    +D +LKCL  NP  R +A   + HP+ +
Sbjct: 248 QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 297

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 78.6 bits (193), Expect = 3e-19
 Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 5/87 (5%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPP---IPDSVSRDAR 87
           +       +D++S+GC + E+LT   P+ G       ++  R +  P     + +S D  
Sbjct: 187 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLD 246

Query: 88  DFILKCLQVNPNDRPTAAQLMEHPFVK 114
             +LK L  NP +R   A  M    V+
Sbjct: 247 AVVLKALAKNPENRYQTAAEMRADLVR 273

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 79.0 bits (194), Expect = 3e-19
 Identities = 19/89 (21%), Positives = 31/89 (34%), Gaps = 8/89 (8%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRDARDFI 90
               Y    D WS G  + EML    P++         KI   E    P   + D +D +
Sbjct: 174 STKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE-LRFPPFFNEDVKDLL 232

Query: 91  LKCLQVNPNDR-----PTAAQLMEHPFVK 114
            + +  + + R          +  HP+ K
Sbjct: 233 SRLITRDLSQRLGNLQNGTEDVKNHPWFK 261

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.1 bits (194), Expect = 3e-19
 Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 9/93 (9%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGELPPIPDSVSRDARDF 89
           K+G +   +D+WS G  + E+ T     +     E  L  +  G L   PD+      + 
Sbjct: 208 KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFEL 267

Query: 90  ILKCLQVNPNDRPTAAQLME------HPFVKRP 116
           +  C Q NP  RP+  +++        P  +  
Sbjct: 268 MRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 300

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.8 bits (193), Expect = 4e-19
 Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 4/82 (4%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG----VEWALFKIARGELPPIPDSVSRDARD 88
            +  Y + +D+WS G  + E+ +     +      E    ++  G     PD  + +   
Sbjct: 209 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ 268

Query: 89  FILKCLQVNPNDRPTAAQLMEH 110
            +L C    P+ RPT ++L+EH
Sbjct: 269 TMLDCWHGEPSQRPTFSELVEH 290

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 77.9 bits (191), Expect = 7e-19
 Identities = 15/81 (18%), Positives = 31/81 (38%), Gaps = 3/81 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIARGELPPIPDSVSRDARDF 89
           +   +   +D+WS G  + E+++     +     +  +  I +    P P          
Sbjct: 206 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQL 265

Query: 90  ILKCLQVNPNDRPTAAQLMEH 110
           +L C Q + N RP   Q++  
Sbjct: 266 MLDCWQKDRNHRPKFGQIVNT 286

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.6 bits (190), Expect = 8e-19
 Identities = 31/123 (25%), Positives = 42/123 (34%), Gaps = 31/123 (25%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPP---------------- 77
            YG+  D+W+VGC + E+L R     G      L +I      P                
Sbjct: 177 MYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT 236

Query: 78  -----------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK-RPLPT-SWGLP 124
                      I  +   D  D I      NP  R TA Q ++  +   RP PT    LP
Sbjct: 237 FKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLP 296

Query: 125 TPH 127
            P+
Sbjct: 297 RPN 299

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.1 bits (189), Expect = 2e-18
 Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 4/82 (4%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGEL-PPIPDSVSRDARD 88
             G Y + +D+WS G  + E+ +     +    V+   +K+ +       P   + +   
Sbjct: 239 FEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYI 298

Query: 89  FILKCLQVNPNDRPTAAQLMEH 110
            +  C   +   RP+   L   
Sbjct: 299 IMQSCWAFDSRKRPSFPNLTSF 320

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 76.5 bits (187), Expect = 2e-18
 Identities = 33/136 (24%), Positives = 46/136 (33%), Gaps = 30/136 (22%)

Query: 9   LGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA-- 66
            G  +R+  H           V   +  Y    DIWSVGC   EM+     + GV  A  
Sbjct: 150 FGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ 209

Query: 67  LFKIARGELPP----------------------------IPDSVSRDARDFILKCLQVNP 98
           L +I R    P                                +     D + K L+++P
Sbjct: 210 LMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDP 269

Query: 99  NDRPTAAQLMEHPFVK 114
           N R TA Q +EH + K
Sbjct: 270 NQRITAKQALEHAYFK 285

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.1 bits (186), Expect = 4e-18
 Identities = 29/119 (24%), Positives = 43/119 (36%), Gaps = 33/119 (27%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPP------------- 77
               Y    DIWS+GC   EM+TR   + G      LF+I R    P             
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235

Query: 78  ---------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK---RPLP 118
                          +   +  D R  + + L  +PN R +A   + HPF +   +P+P
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.3 bits (184), Expect = 6e-18
 Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 5/89 (5%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGELPPIPDSVSRDARDF 89
               +   +D+WS G  + E++T     +        +  I  G   P P          
Sbjct: 186 SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQL 245

Query: 90  ILKCLQVNPNDRPTAAQLME--HPFVKRP 116
           +++C Q     RP  A ++      ++ P
Sbjct: 246 MMQCWQQERARRPKFADIVSILDKLIRAP 274

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.3 bits (184), Expect = 9e-18
 Identities = 26/118 (22%), Positives = 38/118 (32%), Gaps = 34/118 (28%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPD------------- 80
            YG P D+W  GC + EM TR     G   +  L  I++      P+             
Sbjct: 198 DYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEK 257

Query: 81  ------------------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR-PLPT 119
                                  A D I K L ++P  R  +   + H F    P+P+
Sbjct: 258 LELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPS 315

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 74.0 bits (181), Expect = 2e-17
 Identities = 14/80 (17%), Positives = 33/80 (41%), Gaps = 3/80 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGELPPIPDSVSRDARDF 89
               + + +D+W+ G  + E+ T     +    +      + +      P+       + 
Sbjct: 189 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYEL 248

Query: 90  ILKCLQVNPNDRPTAAQLME 109
           +  C Q NP+DRP+ A++ +
Sbjct: 249 MRACWQWNPSDRPSFAEIHQ 268

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 73.3 bits (179), Expect = 4e-17
 Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 6/87 (6%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALFKIARGELPPIPDSVSRDARDFILK 92
           + GY    D W++G  + EM     P+F      +++         P   S D +D +  
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271

Query: 93  CLQVNPNDR-----PTAAQLMEHPFVK 114
            LQV+   R          +  H +  
Sbjct: 272 LLQVDLTKRFGNLKNGVNDIKNHKWFA 298

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.9 bits (178), Expect = 6e-17
 Identities = 24/136 (17%), Positives = 36/136 (26%), Gaps = 36/136 (26%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPD---------- 80
               Y    D+WS GC + E+L     + G      L +I +    P  +          
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 255

Query: 81  ------------------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR------P 116
                                 +A     + L+  P  R T  +   H F          
Sbjct: 256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVK 315

Query: 117 LPTSWGLPTPHHFIMQ 132
           LP     P   +F  Q
Sbjct: 316 LPNGRDTPALFNFTTQ 331

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.9 bits (175), Expect = 1e-16
 Identities = 26/120 (21%), Positives = 40/120 (33%), Gaps = 31/120 (25%)

Query: 30  VNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIARGELPP--------- 77
           V      Y    D+WS GC   E+    RP F    V+  L +I R    P         
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT 231

Query: 78  -------------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 118
                              +   ++   RD +   L+ NP  R +A + ++HP+     P
Sbjct: 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCP 291

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.8 bits (170), Expect = 7e-16
 Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 4/81 (4%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGEL-PPIPDSVSRDARD 88
            N  Y   +D+WS G  + E+ +     +    V+   +K+ +       P+    +  D
Sbjct: 220 FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYD 279

Query: 89  FILKCLQVNPNDRPTAAQLME 109
            +  C   +P  RPT  Q+++
Sbjct: 280 IMKTCWDADPLKRPTFKQIVQ 300

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 69.5 bits (169), Expect = 1e-15
 Identities = 11/95 (11%), Positives = 27/95 (28%), Gaps = 12/95 (12%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLT--RCRPYFGVEWALFKIARGE-------LPPIPDSVS 83
                    D+ S+G  ++                   K  R         +  +     
Sbjct: 186 LGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYP 245

Query: 84  RDARDFILKCLQVNPNDRPTAA---QLMEHPFVKR 115
            +   ++  C  +  +D+P  +   QL  + F ++
Sbjct: 246 SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 280

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.1 bits (168), Expect = 1e-15
 Identities = 24/117 (20%), Positives = 40/117 (34%), Gaps = 32/117 (27%)

Query: 30  VNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG--------------------------- 62
           V      Y    DIWSVGC + EM+T    + G                           
Sbjct: 189 VILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQS 248

Query: 63  -----VEWALFKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
                    L ++ + +   I  + S  A + + K L ++   R TA + + HP+ +
Sbjct: 249 DEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 305

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.8 bits (167), Expect = 2e-15
 Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 33/134 (24%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG------------------------------ 62
               Y    DIWSVGC + E+LT    + G                              
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 251

Query: 63  --VEWALFKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR-PLPT 119
                +L ++ +     +    +  A D + K L ++ + R TAAQ + H +  +   P 
Sbjct: 252 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 311

Query: 120 SWGLPTPHHFIMQS 133
              +  P+    +S
Sbjct: 312 DEPVADPYDQSFES 325

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.8 bits (162), Expect = 1e-14
 Identities = 26/112 (23%), Positives = 38/112 (33%), Gaps = 32/112 (28%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPP---------------- 77
           GY    DIWSVGC + EML+    + G      L  I      P                
Sbjct: 189 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 248

Query: 78  --------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
                         +  +    A D + K L  NP+ R    Q + HP++++
Sbjct: 249 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 300

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 66.0 bits (160), Expect = 2e-14
 Identities = 28/124 (22%), Positives = 42/124 (33%), Gaps = 39/124 (31%)

Query: 30  VNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF----------------GVEWALFKIARG 73
           +      Y    D+WS+GC +  M+ R  P+F                G E     I + 
Sbjct: 200 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 259

Query: 74  ELPPIPD-----------------------SVSRDARDFILKCLQVNPNDRPTAAQLMEH 110
            +   P                         VS +A DF+ K L+ +   R TA + MEH
Sbjct: 260 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 319

Query: 111 PFVK 114
           P+  
Sbjct: 320 PYFY 323

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.6 bits (156), Expect = 7e-14
 Identities = 28/144 (19%), Positives = 43/144 (29%), Gaps = 44/144 (30%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPD---------- 80
              GY    DIWSVGC + EM+     + G        K+      P P+          
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 250

Query: 81  -------------------------------SVSRDARDFILKCLQVNPNDRPTAAQLME 109
                                            +  ARD + K L ++P  R +    ++
Sbjct: 251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 310

Query: 110 HPFVKR-PLPTSWGLPTPHHFIMQ 132
           HP++     P     P P  +  Q
Sbjct: 311 HPYINVWYDPAEVEAPPPQIYDKQ 334

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.8 bits (149), Expect = 6e-13
 Identities = 18/103 (17%), Positives = 36/103 (34%), Gaps = 23/103 (22%)

Query: 30  VNSKNGGYGLPADIWSVGCTVLEMLTRCRPY-------------FGVEWALFKIARGEL- 75
           +N K+      ADI+++G    E+  RC                   + ++ ++ +    
Sbjct: 188 INMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE 247

Query: 76  ----PPIPDS-----VSRDARDFILKCLQVNPNDRPTAAQLME 109
               P IP+        R     + +C   N   R TA ++ +
Sbjct: 248 QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.6 bits (148), Expect = 8e-13
 Identities = 27/137 (19%), Positives = 41/137 (29%), Gaps = 49/137 (35%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----------WALFKIARGELPP----- 77
               +G  ADIWS  C + E++T    +   E           A      GELP      
Sbjct: 202 LGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRN 261

Query: 78  ----------------------------------IPDSVSRDARDFILKCLQVNPNDRPT 103
                                                  +++  DF+   LQ++P  R  
Sbjct: 262 GKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 321

Query: 104 AAQLMEHPFVKRPLPTS 120
           A  L+ HP++K  L   
Sbjct: 322 AGGLVNHPWLKDTLGME 338

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 60.6 bits (146), Expect = 1e-12
 Identities = 8/86 (9%), Positives = 22/86 (25%), Gaps = 9/86 (10%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG-----VEWALFKIARGELPP----IPDSVS 83
                    D+ ++G   +  L    P+ G      +    +I   +       +     
Sbjct: 186 LGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFP 245

Query: 84  RDARDFILKCLQVNPNDRPTAAQLME 109
            +   ++     +  +  P    L  
Sbjct: 246 EEFYKYMHYARNLAFDATPDYDYLQG 271

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	133
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.91
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.91
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.91
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.9
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.9
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.89
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.89
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.89
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.89
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.89
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.88
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.88
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.88
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.88
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.88
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.88
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.88
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.87
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.87
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.86
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.86
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.85
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.84
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.84
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.84
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.83
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.83
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.83
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.83
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.83
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.82
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.82
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.82
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.82
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.82
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.82
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.81
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.81
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.81
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.81
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.81
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.81
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.81
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.8
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.79
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.79
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.79
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.79
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.78
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.78
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.78
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.78
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.77
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.77
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.77
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.77
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.76
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.76
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.75
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.72
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.67
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.59

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=6.4e-25  Score=144.65  Aligned_cols=96  Identities=25%  Similarity=0.458  Sum_probs=82.0

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      +..+||+.|+|||++..  ..|+.++||||+||++|+|++|..||.+..  .....+..+.....+..++.++.+++.+|
T Consensus       172 ~~~~gt~~Y~APE~l~~--~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~s~~l~~li~~~  249 (269)
T d2java1         172 KAFVGTPYYMSPEQMNR--MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRM  249 (269)
T ss_dssp             ----CCCSCCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHH
T ss_pred             ccCCCCcccCCHHHHcC--CCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHH
Confidence            45699999999999987  458999999999999999999999998754  44556666766677888999999999999


Q ss_pred             cccCCCCCCCHHHHhhCCCC
Q 032788           94 LQVNPNDRPTAAQLMEHPFV  113 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~~~~  113 (133)
                      |..||.+||+++|+++|||+
T Consensus       250 L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         250 LNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             TCSSGGGSCCHHHHHTSTTC
T ss_pred             cCCChhHCcCHHHHHhCCcC
Confidence            99999999999999999995

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.6e-24  Score=142.82  Aligned_cols=103  Identities=16%  Similarity=0.203  Sum_probs=80.7

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhC-CCCCCCCCCCHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARG-ELPPIPDSVSRDARDFIL   91 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~   91 (133)
                      +..+||+.|+|||++... ..++.++||||+||++|+|++|..||....   ......... .....+..++.++.+++.
T Consensus       163 ~~~~GT~~Y~APE~~~~~-~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~  241 (271)
T d1nvra_         163 NKMCGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH  241 (271)
T ss_dssp             CCCCSCGGGSCTHHHHCS-SBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHH
T ss_pred             cceeeCcCccCHhHhcCC-CCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCHHHHHHHH
Confidence            456899999999999873 223678999999999999999999997643   222222222 222233567899999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKRPLPT  119 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~~~~~  119 (133)
                      +||..||.+|||++|+++||||++..+.
T Consensus       242 ~~L~~dP~~R~t~~eil~hpwf~~~l~k  269 (271)
T d1nvra_         242 KILVENPSARITIPDIKKDRWYNKPLKK  269 (271)
T ss_dssp             HHSCSSTTTSCCHHHHTTCTTTTCCCCC
T ss_pred             HHcCCChhHCcCHHHHhcCHhhCcCCCC
Confidence            9999999999999999999999876653

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=7.5e-25  Score=143.90  Aligned_cols=97  Identities=25%  Similarity=0.409  Sum_probs=82.3

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...+||+.|+|||++.+  ..|+.++||||+||++|+|++|..||.+..  .....+. ......|..++.++.+++.+|
T Consensus       162 ~~~~Gt~~Y~APE~~~~--~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~-~~~~~~p~~~s~~~~~li~~~  238 (263)
T d2j4za1         162 TTLCGTLDYLPPEMIEG--RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS-RVEFTFPDFVTEGARDLISRL  238 (263)
T ss_dssp             EETTEEGGGCCHHHHTT--CCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH-TTCCCCCTTSCHHHHHHHHHH
T ss_pred             cccCCCCcccCHHHHcC--CCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHH-cCCCCCCccCCHHHHHHHHHH
Confidence            34589999999999987  458999999999999999999999998764  3333333 344466778899999999999


Q ss_pred             cccCCCCCCCHHHHhhCCCCCC
Q 032788           94 LQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      |..||.+|||++|+++||||..
T Consensus       239 L~~dp~~R~t~~eil~hp~~~~  260 (263)
T d2j4za1         239 LKHNPSQRPMLREVLEHPWITA  260 (263)
T ss_dssp             TCSSGGGSCCHHHHHTCHHHHH
T ss_pred             ccCCHhHCcCHHHHHcCcCcCC
Confidence            9999999999999999999853

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.4e-24  Score=141.95  Aligned_cols=96  Identities=20%  Similarity=0.382  Sum_probs=78.2

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--H-HHHHHHhCCCC-CCCCCCCHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--W-ALFKIARGELP-PIPDSVSRDARDFIL   91 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~-~~~~~~~~~~~-~~~~~~~~~~~~~~~   91 (133)
                      .+.+||+.|+|||++.+   .|+.++||||+||++|+|++|..||.+..  . ....+..+..+ ..+...+.++.+++.
T Consensus       171 ~~~~GT~~Y~aPE~~~~---~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~  247 (270)
T d1t4ha_         171 KAVIGTPEFMAPEMYEE---KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIE  247 (270)
T ss_dssp             EESCSSCCCCCGGGGGT---CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHH
T ss_pred             CCcccCccccCHHHhCC---CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcccCccCCHHHHHHHH
Confidence            34699999999999875   38999999999999999999999997543  2 23334333322 234457889999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVK  114 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~  114 (133)
                      +||..||.+|||++|+++||||+
T Consensus       248 ~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         248 GCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             HHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             HHccCCHhHCcCHHHHhCCcccC
Confidence            99999999999999999999985

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=5.3e-24  Score=141.43  Aligned_cols=99  Identities=19%  Similarity=0.366  Sum_probs=81.8

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ++.+||+.|+|||++.+  ..|+.++||||+||++|+|++|..||.+.+  .....+... ....+..++..+.+++.+|
T Consensus       168 ~~~~GT~~Y~APE~~~~--~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~~  244 (288)
T d1uu3a_         168 NSFVGTAQYVSPELLTE--KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-EYDFPEKFFPKARDLVEKL  244 (288)
T ss_dssp             --CCCCGGGCCHHHHHT--CCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTT-CCCCCTTCCHHHHHHHHTT
T ss_pred             ccccCCccccCceeecc--CCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcC-CCCCCccCCHHHHHHHHHH
Confidence            45689999999999987  458999999999999999999999998754  333444433 3456778899999999999


Q ss_pred             cccCCCCCCCHHH------HhhCCCCCCCC
Q 032788           94 LQVNPNDRPTAAQ------LMEHPFVKRPL  117 (133)
Q Consensus        94 l~~~p~~R~s~~~------~l~~~~~~~~~  117 (133)
                      |..||.+|+|++|      +++||||+.--
T Consensus       245 L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~  274 (288)
T d1uu3a_         245 LVLDATKRLGCEEMEGYGPLKAHPFFESVT  274 (288)
T ss_dssp             SCSSGGGSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred             ccCCHhHCcCHHHHcCCHHHHcCCccCCCC
Confidence            9999999999987      58899998743

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=8.2e-24  Score=141.65  Aligned_cols=100  Identities=23%  Similarity=0.415  Sum_probs=77.7

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCC---CCCCCCCHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELP---PIPDSVSRDARDFI   90 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~   90 (133)
                      .+.+||+.|+|||++.+  ..|+.++||||+||++|+|++|..||.+..  .....+......   +.+..++..+.+++
T Consensus       167 ~~~~GT~~y~APE~~~~--~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li  244 (307)
T d1a06a_         167 STACGTPGYVAPEVLAQ--KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFI  244 (307)
T ss_dssp             ------CTTSCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHH
T ss_pred             eeeeeCccccCcHHHcC--CCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHHHHHHH
Confidence            45689999999999987  458999999999999999999999997754  333344333321   23356889999999


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      .+||..||.+|||++|+++||||++..
T Consensus       245 ~~~L~~dP~~R~s~~eil~hp~~~~~~  271 (307)
T d1a06a_         245 RHLMEKDPEKRFTCEQALQHPWIAGDT  271 (307)
T ss_dssp             HHHSCSSGGGSCCHHHHHHSTTTTSSC
T ss_pred             HHHccCCHhHCcCHHHHhcCHhhCCCC
Confidence            999999999999999999999998643

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1e-23  Score=140.37  Aligned_cols=98  Identities=32%  Similarity=0.526  Sum_probs=81.1

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC--CCCCCCCCHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL--PPIPDSVSRDARDFIL   91 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~   91 (133)
                      ...+||+.|+|||++.+  ..|+.++||||+||++|+|++|..||.+..  ..+..+.....  ...+..++..+.+++.
T Consensus       174 ~~~~gt~~Y~aPE~~~~--~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~  251 (293)
T d1yhwa1         174 STMVGTPYWMAPEVVTR--KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN  251 (293)
T ss_dssp             CCCCSCGGGCCHHHHSS--SCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHH
T ss_pred             cccccCCCccChhhhcC--CCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHHHHH
Confidence            34589999999999987  458999999999999999999999997754  33333333322  2345678899999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                      +||..||.+|++++|+++||||+.
T Consensus       252 ~~L~~dP~~R~s~~eil~Hp~~~~  275 (293)
T d1yhwa1         252 RCLDMDVEKRGSAKELLQHQFLKI  275 (293)
T ss_dssp             HHTCSSTTTSCCHHHHTTCGGGGG
T ss_pred             HHccCChhHCcCHHHHhcCHhhCC
Confidence            999999999999999999999974

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.8e-23  Score=137.94  Aligned_cols=102  Identities=35%  Similarity=0.552  Sum_probs=82.8

Q ss_pred             hhcccccccccccccccc---CCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC--CCCCCCHHHH
Q 032788           15 RKWHVSRWNSLTDQVVNS---KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP--IPDSVSRDAR   87 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~---~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~   87 (133)
                      .++.+||+.|+|||++..   ....|+.++||||+||++|+|++|..||.+..  ..+..+.....+.  .+..++.++.
T Consensus       167 ~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~  246 (288)
T d2jfla1         167 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFK  246 (288)
T ss_dssp             HTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGGGSCHHHH
T ss_pred             ccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCccccCCHHHH
Confidence            346799999999999853   12447899999999999999999999997654  4455555554332  3457889999


Q ss_pred             HHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           88 DFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        88 ~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      +++.+||..||.+|+|++|+++|||++..
T Consensus       247 ~li~~~L~~dp~~R~t~~ell~hp~~~~~  275 (288)
T d2jfla1         247 DFLKKCLEKNVDARWTTSQLLQHPFVTVD  275 (288)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHTTSGGGCCC
T ss_pred             HHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence            99999999999999999999999999753

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3.4e-23  Score=140.17  Aligned_cols=98  Identities=26%  Similarity=0.456  Sum_probs=82.6

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ...+||+.|+|||++.+  ..|+.++|+||+||++|+|++|..||.+.+ ..+...........|..++.++.+++.+||
T Consensus       163 ~~~~GT~~Y~aPE~~~~--~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli~~~L  240 (337)
T d1o6la_         163 KTFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLL  240 (337)
T ss_dssp             CCCEECGGGCCGGGGSS--SCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHT
T ss_pred             ccceeCHHHhhhhhccC--CCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCCccCCHHHHHHHHhhc
Confidence            34699999999999988  459999999999999999999999998765 333333333345678889999999999999


Q ss_pred             ccCCCCCCC-----HHHHhhCCCCCC
Q 032788           95 QVNPNDRPT-----AAQLMEHPFVKR  115 (133)
Q Consensus        95 ~~~p~~R~s-----~~~~l~~~~~~~  115 (133)
                      ..||.+|++     ++++++||||+.
T Consensus       241 ~~dP~~R~~~~~~~~~eil~Hp~f~~  266 (337)
T d1o6la_         241 KKDPKQRLGGGPSDAKEVMEHRFFLS  266 (337)
T ss_dssp             CSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred             cCCchhhcccccccHHHHHcCccccc
Confidence            999999994     899999999975

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=2.2e-23  Score=139.67  Aligned_cols=103  Identities=35%  Similarity=0.563  Sum_probs=83.4

Q ss_pred             hccccccccccccccccC-CCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC-CCCCCCHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP-IPDSVSRDARDFIL   91 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~-~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~   91 (133)
                      ...+||+.|+|||++... ...|+.++||||+||++|++++|..||.+..  ..+..+..+..+. .+..++..+.+++.
T Consensus       169 ~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~li~  248 (309)
T d1u5ra_         169 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVD  248 (309)
T ss_dssp             CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSCHHHHHHHH
T ss_pred             CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCCCHHHHHHHH
Confidence            456999999999998642 2458899999999999999999999997654  4444454554433 34567899999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                      +||..||.+|||++|+++|||+....+
T Consensus       249 ~~L~~dP~~Rpt~~ell~Hp~~~~~~~  275 (309)
T d1u5ra_         249 SCLQKIPQDRPTSEVLLKHRFVLRERP  275 (309)
T ss_dssp             HHTCSSGGGSCCHHHHTTCHHHHSCCC
T ss_pred             HHCcCChhHCcCHHHHHhCHHhcCCCC
Confidence            999999999999999999999976443

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=5.4e-23  Score=137.29  Aligned_cols=100  Identities=28%  Similarity=0.420  Sum_probs=79.4

Q ss_pred             hhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhC--CC---------------
Q 032788           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARG--EL---------------   75 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~--~~---------------   75 (133)
                      ....+||+.|+|||++..  ..|+.++||||+||++|+|++|..||.+..  ..+..+...  ..               
T Consensus       172 ~~~~~gT~~Y~APE~~~~--~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  249 (305)
T d1blxa_         172 LTSVVVTLWYRAPEVLLQ--SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA  249 (305)
T ss_dssp             GCCCCCCCTTCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGG
T ss_pred             CCCcccChhhcCcchhcC--CCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhh
Confidence            346799999999999987  459999999999999999999999998654  222222210  00               


Q ss_pred             ---------CCCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           76 ---------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        76 ---------~~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                               .......+..+.+|+.+||..||.+|+|++|+++||||++.
T Consensus       250 ~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i  299 (305)
T d1blxa_         250 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL  299 (305)
T ss_dssp             SCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             hccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCc
Confidence                     01123567889999999999999999999999999999864

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=7.8e-23  Score=136.30  Aligned_cols=100  Identities=23%  Similarity=0.276  Sum_probs=77.1

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCC------------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELP------------------   76 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~------------------   76 (133)
                      ..+||+.|+|||++... ..|+.++||||+||++|+|++|..||.+..  +.+..+.+....                  
T Consensus       159 ~~~gt~~y~aPE~~~~~-~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~  237 (299)
T d1ua2a_         159 HQVVTRWYRAPELLFGA-RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTF  237 (299)
T ss_dssp             CSCCCCTTCCHHHHTTC-SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCC
T ss_pred             ceecChhhccHHHHccC-CCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhh
Confidence            35899999999998753 347999999999999999999999997653  333332211000                  


Q ss_pred             -CC--------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           77 -PI--------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        77 -~~--------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                       ..        ....+..+.+++.+||..||.+|+|++|+++||||+...
T Consensus       238 ~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p  287 (299)
T d1ua2a_         238 KSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP  287 (299)
T ss_dssp             CCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred             ccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCCC
Confidence             00        123567899999999999999999999999999998654

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.88  E-value=8.2e-23  Score=138.92  Aligned_cols=99  Identities=26%  Similarity=0.364  Sum_probs=81.4

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC---CCCCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP---IPDSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~   91 (133)
                      +.+||+.|+|||++.+  ..|+.++||||+||++|+|++|..||.+.+  ..+..+.......   ....++..+.+++.
T Consensus       184 ~~~gT~~Y~aPEv~~~--~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  261 (350)
T d1koaa2         184 VTTGTAEFAAPEVAEG--KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIR  261 (350)
T ss_dssp             EECSCTTTCCHHHHHT--CCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHH
T ss_pred             eecCcccccCHHHHcC--CCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHH
Confidence            4699999999999987  458999999999999999999999998654  3444444443321   12357889999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                      +||..||.+|+|++|+++||||+...
T Consensus       262 ~~L~~dP~~R~t~~eil~hp~~~~~~  287 (350)
T d1koaa2         262 KLLLADPNTRMTIHQALEHPWLTPGN  287 (350)
T ss_dssp             HHCCSSGGGSCCHHHHHHSTTTSCTT
T ss_pred             HHccCChhHCcCHHHHhcCcccCCCC
Confidence            99999999999999999999998643

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.88  E-value=5.8e-23  Score=137.96  Aligned_cols=98  Identities=21%  Similarity=0.371  Sum_probs=83.0

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      .+.+||+.|+|||++.+  ..|+.++|+||+||++|+|++|..||.+.+  .....+..+. ...+..++.++.+++.+|
T Consensus       159 ~~~~Gt~~Y~APE~l~~--~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~~  235 (316)
T d1fota_         159 YTLCGTPDYIAPEVVST--KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE-LRFPPFFNEDVKDLLSRL  235 (316)
T ss_dssp             CCCCSCTTTCCHHHHTT--CCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHH
T ss_pred             ccccCcccccCHHHHcC--CCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHH
Confidence            45699999999999987  458999999999999999999999998765  3344444443 356778899999999999


Q ss_pred             cccCCCCCC-----CHHHHhhCCCCCCC
Q 032788           94 LQVNPNDRP-----TAAQLMEHPFVKRP  116 (133)
Q Consensus        94 l~~~p~~R~-----s~~~~l~~~~~~~~  116 (133)
                      |..||.+|+     +++++++||||++.
T Consensus       236 L~~dp~~R~~~~r~t~~~il~Hp~f~~i  263 (316)
T d1fota_         236 ITRDLSQRLGNLQNGTEDVKNHPWFKEV  263 (316)
T ss_dssp             TCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             hhhCHHhccccchhhHHHHHcCcccccC
Confidence            999999996     89999999999864

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.88  E-value=8.4e-23  Score=139.51  Aligned_cols=99  Identities=23%  Similarity=0.379  Sum_probs=81.6

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH----HHHHHHHhCCCCCCCCCCCHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELPPIPDSVSRDARDFIL   91 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (133)
                      ...+||+.|+|||++... ..|+.++|+||+||++|+|++|..||.+..    ..+...........+..++.++.+++.
T Consensus       163 ~~~~GT~~y~APE~~~~~-~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~  241 (364)
T d1omwa3         163 HASVGTHGYMAPEVLQKG-VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE  241 (364)
T ss_dssp             CSCCSCGGGCCHHHHSTT-CCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCCCSSSCHHHHHHHH
T ss_pred             cccccccccchhHHhhcC-CCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHH
Confidence            346899999999999752 358999999999999999999999997643    223333334444567789999999999


Q ss_pred             HHcccCCCCCCC-----HHHHhhCCCCCC
Q 032788           92 KCLQVNPNDRPT-----AAQLMEHPFVKR  115 (133)
Q Consensus        92 ~~l~~~p~~R~s-----~~~~l~~~~~~~  115 (133)
                      +||..||.+|++     ++++++||||+.
T Consensus       242 ~~L~~dP~~R~t~~~~~a~eil~Hp~f~~  270 (364)
T d1omwa3         242 GLLQRDVNRRLGCLGRGAQEVKESPFFRS  270 (364)
T ss_dssp             HHTCSSTTTSTTTSSSTHHHHHTSGGGTT
T ss_pred             HHcccCHHHhCCCcccCHHHHHcCccccC
Confidence            999999999999     799999999985

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.8e-23  Score=139.73  Aligned_cols=97  Identities=21%  Similarity=0.408  Sum_probs=82.5

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      +..+||+.|+|||++.+  ..|+.++|+||+||++|+|++|..||.+..  .....+..+ .+..+..++..+.+++.+|
T Consensus       161 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dli~~~  237 (320)
T d1xjda_         161 NTFCGTPDYIAPEILLG--QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD-NPFYPRWLEKEAKDLLVKL  237 (320)
T ss_dssp             CCCCSCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-CCCCCTTSCHHHHHHHHHH
T ss_pred             cccCCCCCcCCHHHHcC--CCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcC-CCCCCccCCHHHHHHHHHh
Confidence            34699999999999998  458999999999999999999999998754  333444444 3466778899999999999


Q ss_pred             cccCCCCCCCHH-HHhhCCCCCC
Q 032788           94 LQVNPNDRPTAA-QLMEHPFVKR  115 (133)
Q Consensus        94 l~~~p~~R~s~~-~~l~~~~~~~  115 (133)
                      |..||.+|++++ ++++||||++
T Consensus       238 L~~dP~~R~s~~~~l~~hpff~~  260 (320)
T d1xjda_         238 FVREPEKRLGVRGDIRQHPLFRE  260 (320)
T ss_dssp             SCSSGGGSBTTBSCGGGSGGGTT
T ss_pred             cccCCCCCcCHHHHHHhCchhcc
Confidence            999999999996 8999999976

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=8.3e-23  Score=138.89  Aligned_cols=97  Identities=24%  Similarity=0.395  Sum_probs=82.2

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      .+.+||+.|+|||++.+  ..|+.++|+||+||++|+|++|..||.+.+  .....+..+. ...+..++.++.+++.+|
T Consensus       196 ~~~~Gt~~Y~APE~~~~--~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~~  272 (350)
T d1rdqe_         196 WTLCGTPEALAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK-VRFPSHFSSDLKDLLRNL  272 (350)
T ss_dssp             CCCEECGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-CCCCTTCCHHHHHHHHHH
T ss_pred             ccccCccccCCHHHHcC--CCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCC-CCCCccCCHHHHHHHHHH
Confidence            34689999999999987  458999999999999999999999998765  3334444443 455778999999999999


Q ss_pred             cccCCCCCC-----CHHHHhhCCCCCC
Q 032788           94 LQVNPNDRP-----TAAQLMEHPFVKR  115 (133)
Q Consensus        94 l~~~p~~R~-----s~~~~l~~~~~~~  115 (133)
                      |..||.+|+     +++++++||||+.
T Consensus       273 L~~dP~kR~~~~r~t~~ell~Hp~f~~  299 (350)
T d1rdqe_         273 LQVDLTKRFGNLKNGVNDIKNHKWFAT  299 (350)
T ss_dssp             SCSCTTTCTTSSTTTTHHHHTSGGGTT
T ss_pred             hhhCHHhccccccccHHHHHcCccccC
Confidence            999999995     8999999999975

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1e-22  Score=135.51  Aligned_cols=99  Identities=26%  Similarity=0.404  Sum_probs=80.8

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCC---CCCCCCHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP---IPDSVSRDARDFI   90 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~   90 (133)
                      .+.+||+.|+|||++.+  ..++.++||||+||++|+|++|..||.+..  ..+..+.......   .+..++..+.+++
T Consensus       174 ~~~~~t~~y~APE~~~~--~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li  251 (293)
T d1jksa_         174 KNIFGTPEFVAPEIVNY--EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI  251 (293)
T ss_dssp             SCCCCCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHH
T ss_pred             cccCCCCcccCHHHHcC--CCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCCCHHHHHHH
Confidence            34689999999999987  458999999999999999999999998754  3344444433221   1246788999999


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      .+||..||.+|||++|+++||||+..
T Consensus       252 ~~~L~~dP~~R~s~~eil~hp~~~~~  277 (293)
T d1jksa_         252 RRLLVKDPKKRMTIQDSLQHPWIKPK  277 (293)
T ss_dssp             HTTSCSSGGGSCCHHHHHHSTTTCC-
T ss_pred             HHHccCChhHCcCHHHHhcCcccCCC
Confidence            99999999999999999999999864

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=7e-23  Score=135.05  Aligned_cols=95  Identities=23%  Similarity=0.354  Sum_probs=79.2

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHcc
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQ   95 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (133)
                      ++.+||+.|+|||++.+. ..++.++||||+||++|+|++|..||.+.+..    ..+. ...+..++.++.+++.+||.
T Consensus       167 ~~~~GT~~y~aPE~~~~~-~~~~~~~DiwSlGvilyell~g~~Pf~~~~~i----~~~~-~~~~~~~s~~~~~li~~~L~  240 (273)
T d1xwsa_         167 TDFDGTRVYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI----IRGQ-VFFRQRVSSECQHLIRWCLA  240 (273)
T ss_dssp             CCCCSCGGGSCHHHHHHS-CBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH----HHCC-CCCSSCCCHHHHHHHHHHTC
T ss_pred             cccccCCCcCCHHHHcCC-CCCCcccccccceeeehhHhhCCCCCCCchHH----hhcc-cCCCCCCCHHHHHHHHHHcc
Confidence            456899999999999863 22467899999999999999999999876532    2222 24566789999999999999


Q ss_pred             cCCCCCCCHHHHhhCCCCCCC
Q 032788           96 VNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        96 ~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      .||.+|||++|+++||||++.
T Consensus       241 ~dp~~R~s~~eil~hp~~~~~  261 (273)
T d1xwsa_         241 LRPSDRPTFEEIQNHPWMQDV  261 (273)
T ss_dssp             SSGGGSCCHHHHHTSGGGSSC
T ss_pred             CCHhHCcCHHHHhcCHhhCCC
Confidence            999999999999999999864

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.86  E-value=4.9e-22  Score=135.13  Aligned_cols=99  Identities=27%  Similarity=0.437  Sum_probs=82.5

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCC---CCCCCCCHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELP---PIPDSVSRDARDFI   90 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~   90 (133)
                      ...+||+.|+|||++.+  ..|+.++||||+||++|+|++|..||.+..  ..+..+......   ..+..++.++.+++
T Consensus       186 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li  263 (352)
T d1koba_         186 KVTTATAEFAAPEIVDR--EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFI  263 (352)
T ss_dssp             EEECSSGGGCCHHHHTT--CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHH
T ss_pred             eeccCcccccCHHHHcC--CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHH
Confidence            34599999999999987  458999999999999999999999998754  344445444332   23356889999999


Q ss_pred             HHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           91 LKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        91 ~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      .+||..||.+|+|++|+++||||+..
T Consensus       264 ~~~L~~dp~~R~s~~eil~Hp~~~~~  289 (352)
T d1koba_         264 KNLLQKEPRKRLTVHDALEHPWLKGD  289 (352)
T ss_dssp             HTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred             HHHccCChhHCcCHHHHhcCHhhCCC
Confidence            99999999999999999999999764

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=2.4e-22  Score=135.27  Aligned_cols=98  Identities=31%  Similarity=0.493  Sum_probs=74.2

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChHH-H----------------------------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-A----------------------------   66 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~~-~----------------------------   66 (133)
                      ++.+||+.|+|||++.+  ..|+.++||||+||++|+|++|..||.+.+. .                            
T Consensus       161 ~~~~GT~~Y~APEvl~~--~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (322)
T d1s9ja_         161 NSFVGTRSYMSPERLQG--THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLS  238 (322)
T ss_dssp             ---CCSSCCCCHHHHHC--SCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-----------------------
T ss_pred             ccccCCccccCchHHcC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccccc
Confidence            45799999999999998  4599999999999999999999999965320 0                            


Q ss_pred             ---------------HHHHHhCCCCCCC-CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           67 ---------------LFKIARGELPPIP-DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        67 ---------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                                     .........+..+ ...+.++.+++.+||..||.+|||++|+++||||+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~  303 (322)
T d1s9ja_         239 SYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR  303 (322)
T ss_dssp             -------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred             ccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCc
Confidence                           0000111111111 235788999999999999999999999999999964

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=4.4e-21  Score=128.64  Aligned_cols=99  Identities=25%  Similarity=0.328  Sum_probs=74.3

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHH---HhCCCCCCC------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKI---ARGELPPIP------------   79 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~---~~~~~~~~~------------   79 (133)
                      ..+||+.|+|||++... ..|+.++||||+||++|+|++|..||.+..  .....+   .........            
T Consensus       180 ~~~gT~~Y~aPE~~~~~-~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  258 (318)
T d3blha1         180 NRVVTLWYRPPELLLGE-RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKL  258 (318)
T ss_dssp             SCCSCGGGCCHHHHTTC-SSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC------
T ss_pred             ceecCHHHhhHHHHcCC-CCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhh
Confidence            35899999999998763 358899999999999999999999997644  222221   111111100            


Q ss_pred             ----------------CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           80 ----------------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        80 ----------------~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                                      ......+.+++.+||..||++|+|++|+++||||+..
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~  311 (318)
T d3blha1         259 ELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD  311 (318)
T ss_dssp             -CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSS
T ss_pred             cccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhccC
Confidence                            0124567889999999999999999999999999853

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1e-21  Score=129.70  Aligned_cols=90  Identities=20%  Similarity=0.336  Sum_probs=76.7

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...||+.|+|||.+..  ..++.++||||+|+++||+++ |..||.+..  .....+..+..+..|..++.++.+++..|
T Consensus       169 ~~~gt~~y~APE~l~~--~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~c  246 (277)
T d1xbba_         169 HGKWPVKWYAPECINY--YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLC  246 (277)
T ss_dssp             --CCCGGGCCHHHHHH--CEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             ccCCCceecCchhhcC--CCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHH
Confidence            3478999999999987  458999999999999999997 899998754  44455666777778888999999999999


Q ss_pred             cccCCCCCCCHHHHh
Q 032788           94 LQVNPNDRPTAAQLM  108 (133)
Q Consensus        94 l~~~p~~R~s~~~~l  108 (133)
                      |..||.+||++++++
T Consensus       247 l~~dp~~RPs~~~i~  261 (277)
T d1xbba_         247 WTYDVENRPGFAAVE  261 (277)
T ss_dssp             TCSSTTTSCCHHHHH
T ss_pred             cCCCHhHCcCHHHHH
Confidence            999999999999984

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.84  E-value=2.6e-21  Score=127.72  Aligned_cols=101  Identities=26%  Similarity=0.481  Sum_probs=81.0

Q ss_pred             hcccccccccccccccc----CCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCC---CCCCCCCHHH
Q 032788           16 KWHVSRWNSLTDQVVNS----KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELP---PIPDSVSRDA   86 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~----~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~---~~~~~~~~~~   86 (133)
                      ...+||+.|++||.+..    ....++.++|+||+|+++|+|++|..||.+..  .....+..+...   +....++.++
T Consensus       167 ~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  246 (277)
T d1phka_         167 REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTV  246 (277)
T ss_dssp             CCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHH
T ss_pred             eeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHH
Confidence            44689999999999863    12347889999999999999999999998765  333444444321   1233688999


Q ss_pred             HHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           87 RDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        87 ~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      .+++.+||..||.+|++++|+++||||++.
T Consensus       247 ~~li~~~L~~~p~~R~s~~eil~h~~~~~~  276 (277)
T d1phka_         247 KDLVSRFLVVQPQKRYTAEEALAHPFFQQY  276 (277)
T ss_dssp             HHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred             HHHHHHHccCChhHCcCHHHHHcCHHHHHh
Confidence            999999999999999999999999999875

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=6.2e-22  Score=133.86  Aligned_cols=99  Identities=19%  Similarity=0.345  Sum_probs=76.0

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCC---CCCCC----CCCCHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGE---LPPIP----DSVSRDA   86 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~---~~~~~----~~~~~~~   86 (133)
                      ...+||+.|+|||++.+  ..|+.++|+||+||++|+|++|..||.+..  .....+....   ....+    ..++.++
T Consensus       171 ~~~~gt~~y~aPE~~~~--~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  248 (335)
T d2ozaa1         171 TTPCYTPYYVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEV  248 (335)
T ss_dssp             CCCSCCCSSCCCCCCCG--GGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHH
T ss_pred             ccccCCcccCCcHHHcC--CCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHH
Confidence            34589999999999987  458999999999999999999999997654  2222111111   11122    2468899


Q ss_pred             HHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           87 RDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        87 ~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      .+++.+||..||.+|++++|+++||||...
T Consensus       249 ~~li~~~L~~dP~~R~s~~eil~hp~~~~~  278 (335)
T d2ozaa1         249 KMLIRNLLKTEPTQRMTITEFMNHPWIMQS  278 (335)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHHHSHHHHTT
T ss_pred             HHHHHHHccCChhHCcCHHHHHcCHHhhCC
Confidence            999999999999999999999999999654

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=7.6e-21  Score=127.87  Aligned_cols=100  Identities=24%  Similarity=0.385  Sum_probs=79.7

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHHHHHHhCCCCCCCCCCCHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WALFKIARGELPPIPDSVSRDARDFI   90 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (133)
                      .+..|++.|++||.+......++.++||||+||++|+|++|..||.+..     ..+........+..+...+..+.+++
T Consensus       188 ~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li  267 (322)
T d1vzoa_         188 YDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLI  267 (322)
T ss_dssp             CGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHH
T ss_pred             cccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCcccCCHHHHHHH
Confidence            3468999999999997643346889999999999999999999997643     23333233334456678999999999


Q ss_pred             HHHcccCCCCCC-----CHHHHhhCCCCCC
Q 032788           91 LKCLQVNPNDRP-----TAAQLMEHPFVKR  115 (133)
Q Consensus        91 ~~~l~~~p~~R~-----s~~~~l~~~~~~~  115 (133)
                      .+||..||.+|+     +++|+++||||++
T Consensus       268 ~~~l~~dP~~R~s~~~~t~~eil~Hpff~~  297 (322)
T d1vzoa_         268 QRLLMKDPKKRLGCGPRDADEIKEHLFFQK  297 (322)
T ss_dssp             HHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred             HHHcccCHHHcCCCCcccHHHHHcCHhhcC
Confidence            999999999998     5899999999986

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.7e-21  Score=129.16  Aligned_cols=95  Identities=19%  Similarity=0.287  Sum_probs=80.8

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ..+||+.|+|||++..  ..++.++||||+|+++||+++ |..||.+..  +....+..+..+..|..++.++.+++..|
T Consensus       171 ~~~gt~~y~aPE~~~~--~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~c  248 (285)
T d1u59a_         171 AGKWPLKWYAPECINF--RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDC  248 (285)
T ss_dssp             SSCCCGGGCCHHHHHH--CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHHHHHHHHHT
T ss_pred             ccccCccccChHHHhC--CCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHH
Confidence            3478999999999987  458999999999999999987 899997654  45566677777788888999999999999


Q ss_pred             cccCCCCCCCHHHH---hhCCCC
Q 032788           94 LQVNPNDRPTAAQL---MEHPFV  113 (133)
Q Consensus        94 l~~~p~~R~s~~~~---l~~~~~  113 (133)
                      |..||.+||++.++   +++.|+
T Consensus       249 l~~~p~~RPs~~~i~~~L~~~~~  271 (285)
T d1u59a_         249 WIYKWEDRPDFLTVEQRMRACYY  271 (285)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cCCCHhHCcCHHHHHHHHHHHHH
Confidence            99999999999887   456655

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=3.5e-21  Score=129.66  Aligned_cols=92  Identities=18%  Similarity=0.299  Sum_probs=77.4

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHH-HHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WAL-FKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ..+||+.|+|||++..  ..|+.++||||+||++|+|++ |..||.+..  ..+ ..+..+...+.|..++..+.+++.+
T Consensus       225 ~~~gt~~y~aPE~l~~--~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~  302 (325)
T d1rjba_         225 NARLPVKWMAPESLFE--GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQS  302 (325)
T ss_dssp             TEEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred             cccCCCccCChHHHcC--CCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHH
Confidence            3478999999999987  459999999999999999997 899997653  333 3344555566778899999999999


Q ss_pred             HcccCCCCCCCHHHHhhC
Q 032788           93 CLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~  110 (133)
                      ||..||.+|||++|+++|
T Consensus       303 cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         303 CWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             HTCSSGGGSCCHHHHHHH
T ss_pred             HcCCChhHCcCHHHHHHH
Confidence            999999999999999875

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.2e-20  Score=124.89  Aligned_cols=91  Identities=16%  Similarity=0.273  Sum_probs=74.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCC-ChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...||+.|+|||++..  ..++.++||||+|+++||++++..|+. ...  .....+..+..++.+..++..+.+++..|
T Consensus       172 ~~~gt~~Y~APE~l~~--~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~c  249 (283)
T d1mqba_         172 GGKIPIRWTAPEAISY--RKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQC  249 (283)
T ss_dssp             --CCCGGGSCHHHHHS--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHH
T ss_pred             cCCCCccccCHHHHcc--CCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCCCCchhhHHHHHHHHHHH
Confidence            3478999999999987  459999999999999999998655543 322  44556666777777888999999999999


Q ss_pred             cccCCCCCCCHHHHhh
Q 032788           94 LQVNPNDRPTAAQLME  109 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~  109 (133)
                      |..||.+||++.++++
T Consensus       250 l~~~p~~RPt~~eil~  265 (283)
T d1mqba_         250 WQQERARRPKFADIVS  265 (283)
T ss_dssp             TCSSTTTSCCHHHHHH
T ss_pred             CcCCHhHCcCHHHHHH
Confidence            9999999999999876

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=7e-21  Score=124.50  Aligned_cols=91  Identities=20%  Similarity=0.273  Sum_probs=79.4

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..||+.|+|||.+..  ..++.++||||+|+++|++++ |+.||.+..  +....+.++.....|...+..+.+++.+||
T Consensus       161 ~~~t~~y~aPE~~~~--~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl  238 (258)
T d1k2pa_         161 SKFPVRWSPPEVLMY--SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCW  238 (258)
T ss_dssp             SCCCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTT
T ss_pred             cCCCCCcCCcHHhcC--CCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCCCcccccHHHHHHHHHHc
Confidence            578999999999997  458999999999999999997 788997654  445566677777778888999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032788           95 QVNPNDRPTAAQLMEH  110 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~  110 (133)
                      ..||++|||++++++|
T Consensus       239 ~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         239 HEKADERPTFKILLSN  254 (258)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             cCCHhHCcCHHHHHHH
Confidence            9999999999999986

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2.6e-20  Score=123.93  Aligned_cols=98  Identities=29%  Similarity=0.464  Sum_probs=75.0

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh--CCCCC---------------C
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR--GELPP---------------I   78 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~--~~~~~---------------~   78 (133)
                      .+||+.|+|||.+... ..++.++|+||+|+++|++++|..||.+.+  ..+..+..  +....               .
T Consensus       162 ~~gt~~y~apE~~~~~-~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  240 (298)
T d1gz8a_         162 EVVTLWYRAPEILLGC-KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF  240 (298)
T ss_dssp             CBCCCTTCCHHHHTTC-SSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTS
T ss_pred             ecccceeeehhhhccc-cCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcccccccccccccc
Confidence            4899999999998763 335789999999999999999999997654  22222211  10000               0


Q ss_pred             -----------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           79 -----------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        79 -----------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                                 ....+..+.+++.+||..||.+|+|++|+++||||+.-
T Consensus       241 ~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~  289 (298)
T d1gz8a_         241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV  289 (298)
T ss_dssp             CCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             ccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccC
Confidence                       11346789999999999999999999999999999754

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.2e-20  Score=124.24  Aligned_cols=93  Identities=22%  Similarity=0.422  Sum_probs=77.7

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ....||+.|+|||++..  ..++.++||||+|+++|++++ |..||.+..  .....+..+...+.+..++..+.+++.+
T Consensus       167 ~~~~gt~~y~apE~l~~--~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~  244 (273)
T d1mp8a_         167 SKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTK  244 (273)
T ss_dssp             ----CCGGGCCHHHHHH--CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred             cceecCcccchhhHhcc--CCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHH
Confidence            34578999999999987  459999999999999999987 888887654  4555666777777788899999999999


Q ss_pred             HcccCCCCCCCHHHHhhC
Q 032788           93 CLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~  110 (133)
                      ||..||.+|||++|++++
T Consensus       245 cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         245 CWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             HTCSSGGGSCCHHHHHHH
T ss_pred             HcCCCHhHCcCHHHHHHH
Confidence            999999999999999875

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2e-20  Score=123.40  Aligned_cols=95  Identities=18%  Similarity=0.436  Sum_probs=74.3

Q ss_pred             hccccccccccccccccC-CCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhCCCC----CCCCCCCHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELP----PIPDSVSRDAR   87 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~-~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~   87 (133)
                      +...||+.|+|||++... ...|+.++||||+|+++||+++|..||.+..   .....+..+...    ..+..++..+.
T Consensus       164 ~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~  243 (276)
T d1uwha_         164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK  243 (276)
T ss_dssp             --CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHH
T ss_pred             cccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHH
Confidence            456899999999999753 2358999999999999999999999997643   222333333322    23556789999


Q ss_pred             HHHHHHcccCCCCCCCHHHHhhC
Q 032788           88 DFILKCLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        88 ~~~~~~l~~~p~~R~s~~~~l~~  110 (133)
                      +++.+||..||.+|||+++++++
T Consensus       244 ~li~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         244 RLMAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHH
Confidence            99999999999999999999876

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.9e-20  Score=122.74  Aligned_cols=91  Identities=21%  Similarity=0.325  Sum_probs=74.6

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhC-CCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~-~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..||+.|+|||++..  ..|+.++||||+|+++||++++ .+++....  .....+..+.....|..++.++.+++..||
T Consensus       162 ~~gt~~y~aPE~l~~--~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl  239 (263)
T d1sm2a_         162 TKFPVKWASPEVFSF--SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCW  239 (263)
T ss_dssp             ---CTTSCCHHHHTT--CCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHT
T ss_pred             eecCcccCChHHhcC--CCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHc
Confidence            578999999999987  4599999999999999999985 55555433  445566667767778888999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032788           95 QVNPNDRPTAAQLMEH  110 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~  110 (133)
                      ..||.+||++++++++
T Consensus       240 ~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         240 KERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             cCCHhHCcCHHHHHHH
Confidence            9999999999999875

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.82  E-value=2.3e-20  Score=123.50  Aligned_cols=98  Identities=30%  Similarity=0.473  Sum_probs=74.1

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh--CCC-----------------
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR--GEL-----------------   75 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~--~~~-----------------   75 (133)
                      ...|++.|++||.+... ..++.++|+||+|+++|++++|..||.+.+  ..+..+..  +..                 
T Consensus       159 ~~~~~~~y~~pE~~~~~-~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  237 (286)
T d1ob3a_         159 HEIVTLWYRAPDVLMGS-KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN  237 (286)
T ss_dssp             ---CCCTTCCHHHHTTC-CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred             eecccchhhhHHHHhCC-CCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccc
Confidence            34799999999999763 347899999999999999999999997653  22222211  000                 


Q ss_pred             ---------CCCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCC
Q 032788           76 ---------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  115 (133)
Q Consensus        76 ---------~~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~  115 (133)
                               .......+..+.+++.+||..||++|+|++|+++||||++
T Consensus       238 ~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             CCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             cccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence                     0012345788999999999999999999999999999974

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.9e-20  Score=124.59  Aligned_cols=92  Identities=24%  Similarity=0.432  Sum_probs=78.2

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhC-CCCCCChH---HHHHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVE---WALFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~-~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ..+||+.|+|||++..  ..++.++||||+|+++|+|+++ ..||.+..   .....+..+..+..+..++.++.+++.+
T Consensus       195 ~~~gt~~y~APE~l~~--~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  272 (299)
T d1ywna1         195 DARLPLKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD  272 (299)
T ss_dssp             SCCCGGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHH
T ss_pred             ceeeCccccchhHhhc--CCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHH
Confidence            4589999999999988  4589999999999999999986 55776543   3345556677777888899999999999


Q ss_pred             HcccCCCCCCCHHHHhhC
Q 032788           93 CLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~  110 (133)
                      ||..||.+|||++|+++|
T Consensus       273 cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         273 CWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             HTCSSGGGSCCHHHHHHH
T ss_pred             HcCCChhHCcCHHHHHHH
Confidence            999999999999999986

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.81  E-value=3.9e-20  Score=123.22  Aligned_cols=91  Identities=20%  Similarity=0.370  Sum_probs=75.9

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..||+.|+|||.+..  ..++.++||||+||++||+++ |..||.+..  .....+..+...+.+..++..+.+++..||
T Consensus       193 ~~~t~~y~aPE~~~~--~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl  270 (299)
T d1jpaa_         193 GKIPIRWTAPEAIQY--RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCW  270 (299)
T ss_dssp             ---CGGGSCHHHHHS--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             ccCCccccCHHHHhc--CCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHc
Confidence            367899999999987  458999999999999999997 899997654  445566666666778889999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032788           95 QVNPNDRPTAAQLMEH  110 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~  110 (133)
                      ..||.+||++.|+++.
T Consensus       271 ~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         271 QKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             CSSTTTSCCHHHHHHH
T ss_pred             CCCHhHCcCHHHHHHH
Confidence            9999999999988764

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.6e-20  Score=126.03  Aligned_cols=91  Identities=24%  Similarity=0.406  Sum_probs=77.9

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..||+.|+|||++..  ..|+.++||||+|+++||+++ |..||.+..  .....+..+...+.+..++..+.+++.+||
T Consensus       173 ~~gt~~y~APE~l~~--~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl  250 (317)
T d1xkka_         173 GKVPIKWMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW  250 (317)
T ss_dssp             --CCTTTSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCCCCCTTBCHHHHHHHHHHT
T ss_pred             cccCccccChHHHhc--CCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHhC
Confidence            468999999999988  459999999999999999998 788887654  445566667777778889999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032788           95 QVNPNDRPTAAQLMEH  110 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~  110 (133)
                      ..||.+||++.+++.|
T Consensus       251 ~~dP~~RPs~~eil~~  266 (317)
T d1xkka_         251 MIDADSRPKFRELIIE  266 (317)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             CCChhhCcCHHHHHHH
Confidence            9999999999999876

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=3.8e-21  Score=129.31  Aligned_cols=98  Identities=21%  Similarity=0.318  Sum_probs=80.3

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCCCCC---CCCCCHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI---PDSVSRDARDFIL   91 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~   91 (133)
                      ..+||+.|++||...+  ..|+.++|+||+||++|+|++|..||.+..  .....+........   +..++.++.+++.
T Consensus       162 ~~~~t~~y~ape~~~~--~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  239 (321)
T d1tkia_         162 LLFTAPEYYAPEVHQH--DVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVD  239 (321)
T ss_dssp             EEESCGGGSCHHHHTT--CEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHH
T ss_pred             ccccccccccchhccC--CCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHHHHHH
Confidence            3489999999999987  458999999999999999999999997754  33444444433211   2367899999999


Q ss_pred             HHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           92 KCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      +||..||.+|++++|+++||||++.
T Consensus       240 ~~L~~dp~~R~s~~eil~hp~~~~~  264 (321)
T d1tkia_         240 RLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             TTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             HHccCChhHCcCHHHHhcCHhhccC
Confidence            9999999999999999999999754

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.5e-20  Score=126.56  Aligned_cols=100  Identities=20%  Similarity=0.329  Sum_probs=77.0

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh--C-----------------C
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR--G-----------------E   74 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~--~-----------------~   74 (133)
                      .+.+||..|+|||.+... ..|+.++||||+||++|++++|..||....  ..+..+.+  +                 .
T Consensus       180 ~~~~gt~~y~aPE~~~~~-~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~  258 (350)
T d1q5ka_         180 VSYICSRYYRAPELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK  258 (350)
T ss_dssp             CSCCSCTTSCCHHHHTTC-SSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCC
T ss_pred             ccccccccccChHHhhcc-cCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhcc
Confidence            345899999999998753 458999999999999999999999997643  22222211  0                 0


Q ss_pred             CCC---------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           75 LPP---------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        75 ~~~---------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                      .+.         .....+..+.+++.+||..||.+|+|++|+++||||+..
T Consensus       259 ~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  309 (350)
T d1q5ka_         259 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL  309 (350)
T ss_dssp             CCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             ccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccc
Confidence            000         122467889999999999999999999999999999764

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=5.3e-20  Score=121.85  Aligned_cols=99  Identities=21%  Similarity=0.367  Sum_probs=80.1

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCC-ChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...||+.|+|||.+..  ..++.++||||+|+++|++++|..|+. +..  ..+..+..+...+.+..++..+.+++.+|
T Consensus       173 ~~~gt~~y~aPE~~~~--~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~c  250 (285)
T d1fmka3         173 GAKFPIKWTAPEAALY--GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC  250 (285)
T ss_dssp             ---CCGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHH
T ss_pred             cccccccccChHHHhC--CCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccCHHHHHHHHHH
Confidence            3578999999999987  458999999999999999999655543 332  45566666766677888999999999999


Q ss_pred             cccCCCCCCCHHHHhh--CCCCCCCC
Q 032788           94 LQVNPNDRPTAAQLME--HPFVKRPL  117 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~--~~~~~~~~  117 (133)
                      |..||++||+++++++  ++|+....
T Consensus       251 l~~dP~~Rps~~~i~~~L~~~~~~~~  276 (285)
T d1fmka3         251 WRKEPEERPTFEYLQAFLEDYFTSTE  276 (285)
T ss_dssp             TCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred             cccCHhHCcCHHHHHHHHhhhhcCCC
Confidence            9999999999999987  77886543

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.1e-20  Score=124.42  Aligned_cols=95  Identities=24%  Similarity=0.400  Sum_probs=78.3

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCC-CCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRP-YFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...||+.|+|||.+..  ..++.++||||+|+++|+++++..| +....  .....+..+..+..+..++..+.+++.+|
T Consensus       169 ~~~gt~~y~APE~~~~--~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~c  246 (272)
T d1qpca_         169 GAKFPIKWTAPEAINY--GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLC  246 (272)
T ss_dssp             TCCCCTTTSCHHHHHH--CEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             ccCCcccccChHHHhC--CCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCcccChHHHHHHHHHH
Confidence            4578999999999987  4589999999999999999986554 44332  44556666677777888999999999999


Q ss_pred             cccCCCCCCCHHHHhh--CCCC
Q 032788           94 LQVNPNDRPTAAQLME--HPFV  113 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~--~~~~  113 (133)
                      |..||.+|||++++++  ++||
T Consensus       247 l~~~P~~Rpt~~ei~~~L~~~f  268 (272)
T d1qpca_         247 WKERPEDRPTFDYLRSVLEDFF  268 (272)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cCCCHhHCcCHHHHHHHhhhhh
Confidence            9999999999999987  5555

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=4.7e-20  Score=124.93  Aligned_cols=100  Identities=27%  Similarity=0.353  Sum_probs=76.6

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh--CC-----------------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR--GE-----------------   74 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~--~~-----------------   74 (133)
                      +..+||+.|+|||++.+. ..++.++|+||+||++|+|++|..||.+.+  ..+.....  +.                 
T Consensus       176 ~~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (346)
T d1cm8a_         176 TGYVVTRWYRAPEVILNW-MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNY  254 (346)
T ss_dssp             CSSCSCGGGCCTHHHHTT-TCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHH
T ss_pred             ccccccccccCHHHHcCC-CCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhh
Confidence            456899999999998763 346899999999999999999999997653  11111110  00                 


Q ss_pred             ----C-------CCCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           75 ----L-------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        75 ----~-------~~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                          .       .......+..+.+|+.+||..||.+|+|++|+++||||+..
T Consensus       255 ~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~  307 (346)
T d1cm8a_         255 MKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL  307 (346)
T ss_dssp             HHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             hccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcC
Confidence                0       01123467889999999999999999999999999999864

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.80  E-value=7.2e-20  Score=121.96  Aligned_cols=91  Identities=16%  Similarity=0.427  Sum_probs=77.9

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCC-CCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRC-RPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~-~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      +.+|++.|+|||.+..  ..|+.++||||+|+++||++++. +||.+..  +....+..+..+..+..++.++.+++.+|
T Consensus       201 ~~~~~~~y~aPE~~~~--~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~~~~p~~~~~~~~~li~~c  278 (301)
T d1lufa_         201 NDAIPIRWMPPESIFY--NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLC  278 (301)
T ss_dssp             -CCBCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             CCCcCcCcCCHHHHcc--CCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHH
Confidence            4588899999999998  45999999999999999999875 5676654  45566777777778888999999999999


Q ss_pred             cccCCCCCCCHHHHhh
Q 032788           94 LQVNPNDRPTAAQLME  109 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~  109 (133)
                      |..+|.+|||+.|+++
T Consensus       279 l~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         279 WSKLPADRPSFCSIHR  294 (301)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             cCCChhHCcCHHHHHH
Confidence            9999999999999865

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.4e-19  Score=122.61  Aligned_cols=102  Identities=25%  Similarity=0.349  Sum_probs=76.4

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHh---------------------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR---------------------   72 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~---------------------   72 (133)
                      ...+||+.|+|||++... ..++.++|+||+|+++|+|++|..||.+..  ........                     
T Consensus       170 ~~~~gt~~y~aPE~l~~~-~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (345)
T d1pmea_         170 TEYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY  248 (345)
T ss_dssp             CCCCSCGGGCCGGGTTTB-CSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHH
T ss_pred             ccccccceechHHHhhcC-CCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcc
Confidence            445899999999998653 457899999999999999999999997643  11111100                     


Q ss_pred             --CCCCC-------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           73 --GELPP-------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        73 --~~~~~-------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                        .....       ....++..+.+++.+||..||.+|++++|+++||||+....
T Consensus       249 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~  303 (345)
T d1pmea_         249 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD  303 (345)
T ss_dssp             HHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred             cccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCCC
Confidence              00000       12245678999999999999999999999999999986543

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=8e-20  Score=119.68  Aligned_cols=93  Identities=17%  Similarity=0.298  Sum_probs=76.8

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ....+|..|+|||.+..  ..++.++||||+|+++||+++ |..||....  .....+..+..++.+..++.++.+++.+
T Consensus       158 ~~~~~~~~y~aPE~l~~--~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~  235 (262)
T d1byga_         158 DTGKLPVKWTAPEALRE--KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKN  235 (262)
T ss_dssp             ----CCTTTSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHH
T ss_pred             ccccccccCCChHHHhC--CCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHH
Confidence            34578899999999987  458999999999999999997 687776643  4556666677778888899999999999


Q ss_pred             HcccCCCCCCCHHHHhhC
Q 032788           93 CLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~  110 (133)
                      ||..||.+||++.+++++
T Consensus       236 cl~~dP~~Rps~~~l~~~  253 (262)
T d1byga_         236 CWHLDAAMRPSFLQLREQ  253 (262)
T ss_dssp             HTCSSGGGSCCHHHHHHH
T ss_pred             HcccCHhHCcCHHHHHHH
Confidence            999999999999998764

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=3.2e-20  Score=126.23  Aligned_cols=101  Identities=25%  Similarity=0.342  Sum_probs=71.1

Q ss_pred             hhhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHH--------------------
Q 032788           14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIA--------------------   71 (133)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~--------------------   71 (133)
                      ..+..+||+.|+|||++.+  ..++.++|+||+||++|++++|+.||.+.+  .....+.                    
T Consensus       174 ~~~~~~~t~~y~aPE~l~~--~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  251 (355)
T d2b1pa1         174 MMTPYVVTRYYRAPEVILG--MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN  251 (355)
T ss_dssp             -------CCTTCCHHHHTT--CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHH
T ss_pred             ccccccccccccChhhhcC--CCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHH
Confidence            3455689999999999987  458999999999999999999999997543  1111111                    


Q ss_pred             --hCCCCCC-------------C------CCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           72 --RGELPPI-------------P------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        72 --~~~~~~~-------------~------~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                        .......             +      ...+..+.+|+.+|+..||.+|+|++|+++||||+..
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~  317 (355)
T d2b1pa1         252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW  317 (355)
T ss_dssp             HHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred             HhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence              1110000             0      0124567899999999999999999999999999863

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.3e-19  Score=120.60  Aligned_cols=91  Identities=23%  Similarity=0.348  Sum_probs=78.4

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ..+||+.|+|||.+..  ..|+.++||||+|+++|++++ |..||.+..  .....+..+..+..+..++..+.+++.+|
T Consensus       196 ~~~~~~~y~aPE~l~~--~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~c  273 (299)
T d1fgka_         196 NGRLPVKWMAPEALFD--RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDC  273 (299)
T ss_dssp             TSCCGGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHH
T ss_pred             cCCCChhhhhhhHhcC--CCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHH
Confidence            3589999999999987  459999999999999999997 688886554  44456666777777888999999999999


Q ss_pred             cccCCCCCCCHHHHhh
Q 032788           94 LQVNPNDRPTAAQLME  109 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~  109 (133)
                      |..||.+|||+.|+++
T Consensus       274 l~~dP~~Rps~~eil~  289 (299)
T d1fgka_         274 WHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             ccCCHhHCcCHHHHHH
Confidence            9999999999999986

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.78  E-value=1.6e-19  Score=119.02  Aligned_cols=92  Identities=25%  Similarity=0.403  Sum_probs=66.6

Q ss_pred             hhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC-C--CCCCCCCHHHHHH
Q 032788           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL-P--PIPDSVSRDARDF   89 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~-~--~~~~~~~~~~~~~   89 (133)
                      ....+||+.|+|||++.+  ..++.++||||+|+++|+|++|..||.+..  ........... +  .....++..+.++
T Consensus       171 ~~~~~Gt~~Y~aPE~~~~--~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~l  248 (277)
T d1o6ya_         171 TAAVIGTAQYLSPEQARG--DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAV  248 (277)
T ss_dssp             --------TTCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHHHHHH
T ss_pred             cccccCcccccCHHHHcC--CCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccCCCHHHHHH
Confidence            345689999999999987  458999999999999999999999998754  33333333322 1  2245688999999


Q ss_pred             HHHHcccCCCCCC-CHHHHh
Q 032788           90 ILKCLQVNPNDRP-TAAQLM  108 (133)
Q Consensus        90 ~~~~l~~~p~~R~-s~~~~l  108 (133)
                      +.+||..||.+|| ++++++
T Consensus       249 i~~~L~~dp~~R~~sa~~l~  268 (277)
T d1o6ya_         249 VLKALAKNPENRYQTAAEMR  268 (277)
T ss_dssp             HHHHTCSSGGGSCSSHHHHH
T ss_pred             HHHHccCCHhHCHhHHHHHH
Confidence            9999999999999 676654

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=1.9e-19  Score=121.85  Aligned_cols=101  Identities=26%  Similarity=0.257  Sum_probs=76.8

Q ss_pred             hhccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--HHHHHHHhCCC-----------------
Q 032788           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGEL-----------------   75 (133)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--~~~~~~~~~~~-----------------   75 (133)
                      ..+..||+.|+|||.+... ..++.++|+||+||++|+|++|..||.+.+  .....+.....                 
T Consensus       175 ~~~~~g~~~y~apE~~~~~-~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  253 (348)
T d2gfsa1         175 MTGYVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN  253 (348)
T ss_dssp             GSSSCHHHHTSCHHHHTTC-SCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHH
T ss_pred             cccccccccccCchhhcCC-ccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhh
Confidence            3456899999999998763 346889999999999999999999997643  11111111000                 


Q ss_pred             -----CCC--------CCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           76 -----PPI--------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        76 -----~~~--------~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                           ...        ....+..+.+|+.+||..||.+|+|++|+++||||++.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~  307 (348)
T d2gfsa1         254 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY  307 (348)
T ss_dssp             HHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             hhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCC
Confidence                 000        13467889999999999999999999999999999864

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=3.9e-19  Score=117.61  Aligned_cols=100  Identities=26%  Similarity=0.417  Sum_probs=74.5

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHh--CCC-----------------
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIAR--GEL-----------------   75 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~--~~~-----------------   75 (133)
                      ..++..|++||.+... ..++.++||||+||++|+|++|..||....   .....+..  +..                 
T Consensus       161 ~~~~~~~~~pe~~~~~-~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (292)
T d1unla_         161 EVVTLWYRPPDVLFGA-KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY  239 (292)
T ss_dssp             CCSCGGGCCHHHHTTC-SCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCC
T ss_pred             eccccchhhhhHhccC-CCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhccccccc
Confidence            3677889999998763 346899999999999999999998865422   22222111  100                 


Q ss_pred             ---------CCCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCCC
Q 032788           76 ---------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  118 (133)
Q Consensus        76 ---------~~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~~  118 (133)
                               .......+..+.+++.+|+..||.+|+|++|+++||||++..+
T Consensus       240 ~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~~~  291 (292)
T d1unla_         240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCP  291 (292)
T ss_dssp             CCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSCSC
T ss_pred             ccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCCCC
Confidence                     0112345678999999999999999999999999999987544

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=6e-20  Score=120.92  Aligned_cols=91  Identities=26%  Similarity=0.522  Sum_probs=73.1

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHHHHHH-hCCCCCCCCCCCHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WALFKIA-RGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ...|+..|+|||.+..  ..++.++||||+|+++||+++ |..||.+.+  .....+. .+..++.+..++..+.+++..
T Consensus       173 ~~~~~~~~~aPE~~~~--~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~  250 (273)
T d1u46a_         173 HRKVPFAWCAPESLKT--RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQ  250 (273)
T ss_dssp             ---CCGGGCCHHHHHH--CEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHH
T ss_pred             ccccCcccCCHHHHhC--CCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCCcccccHHHHHHHHH
Confidence            3478889999999987  458999999999999999997 899997654  3334433 334455667889999999999


Q ss_pred             HcccCCCCCCCHHHHhh
Q 032788           93 CLQVNPNDRPTAAQLME  109 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~  109 (133)
                      ||..||++|||++++++
T Consensus       251 cl~~dp~~RPt~~ei~~  267 (273)
T d1u46a_         251 CWAHKPEDRPTFVALRD  267 (273)
T ss_dssp             HTCSSGGGSCCHHHHHH
T ss_pred             HcCCChhHCcCHHHHHH
Confidence            99999999999999864

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.77  E-value=4.1e-19  Score=117.60  Aligned_cols=90  Identities=16%  Similarity=0.309  Sum_probs=74.4

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCC-hH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG-VE--WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..|++.|+|||++..  ..|+.++||||+|+++|+++++..|+.. .+  .....+..+..+..+..++..+.+++.+||
T Consensus       176 ~~g~~~y~aPE~~~~--~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl  253 (287)
T d1opja_         176 AKFPIKWTAPESLAY--NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACW  253 (287)
T ss_dssp             EEECGGGCCHHHHHH--CCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             ccccccccChHHHcC--CCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCCCCCCccchHHHHHHHHHHc
Confidence            368889999999988  4599999999999999999997666543 32  333445556666778889999999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032788           95 QVNPNDRPTAAQLME  109 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~  109 (133)
                      ..||.+|||++++++
T Consensus       254 ~~dP~~Rps~~ei~~  268 (287)
T d1opja_         254 QWNPSDRPSFAEIHQ  268 (287)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             CCCHhHCcCHHHHHH
Confidence            999999999999975

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.77  E-value=4.9e-19  Score=119.06  Aligned_cols=100  Identities=28%  Similarity=0.419  Sum_probs=75.1

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHH-------------hCCC----
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIA-------------RGEL----   75 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~-------------~~~~----   75 (133)
                      ...+||+.|+|||.+... ..++.++|+||+|+++|++++|..||....   .....+.             ....    
T Consensus       187 ~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~  265 (328)
T d3bqca1         187 NVRVASRYFKGPELLVDY-QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP  265 (328)
T ss_dssp             CSCCSCGGGCCHHHHTTC-CCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCG
T ss_pred             cccccCccccCcccccCC-CCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCc
Confidence            445899999999998763 347999999999999999999999986532   1111100             0000    


Q ss_pred             -------------------CCCCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCC
Q 032788           76 -------------------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  116 (133)
Q Consensus        76 -------------------~~~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~  116 (133)
                                         ......++.++.+|+.+||..||.+|+|++|+++||||..-
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v  325 (328)
T d3bqca1         266 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV  325 (328)
T ss_dssp             GGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTS
T ss_pred             ccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence                               00112357889999999999999999999999999999764

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.77  E-value=2.3e-19  Score=121.88  Aligned_cols=100  Identities=27%  Similarity=0.470  Sum_probs=72.5

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH--------HHHHHHHh--CCC----------
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--------WALFKIAR--GEL----------   75 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~--------~~~~~~~~--~~~----------   75 (133)
                      ...+||+.|+|||++..  ..++.++|+||+|++++++++|+.||....        ..+.....  +..          
T Consensus       187 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~  264 (362)
T d1q8ya_         187 TNSIQTREYRSPEVLLG--APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKY  264 (362)
T ss_dssp             CSCCSCGGGCCHHHHHT--CCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTT
T ss_pred             ccccccccccChhhccc--cCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccc
Confidence            34589999999999987  458999999999999999999999986432        11111100  000          


Q ss_pred             --------------CC---------------CCCCCCHHHHHHHHHHcccCCCCCCCHHHHhhCCCCCCCC
Q 032788           76 --------------PP---------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  117 (133)
Q Consensus        76 --------------~~---------------~~~~~~~~~~~~~~~~l~~~p~~R~s~~~~l~~~~~~~~~  117 (133)
                                    ..               .....++.+.+|+.+|+..||.+|||++|+|+||||+...
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~~  335 (362)
T d1q8ya_         265 TRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL  335 (362)
T ss_dssp             HHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred             cccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCCC
Confidence                          00               0112245788999999999999999999999999998543

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=2.4e-19  Score=119.82  Aligned_cols=92  Identities=22%  Similarity=0.365  Sum_probs=76.1

Q ss_pred             ccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCC-CCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Q 032788           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRC-RPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC   93 (133)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~-~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (133)
                      ...||..|+|||.+..  ..++.++||||+|+++|+|++|. .||.+.+  .....+.++..+..+..++.++.+++.+|
T Consensus       185 ~~~gt~~y~aPE~l~~--~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c  262 (309)
T d1fvra_         185 MGRLPVRWMAIESLNY--SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQC  262 (309)
T ss_dssp             ---CCTTTCCHHHHHH--CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHH
T ss_pred             ceecCCcccchHHhcc--CCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCCCCCCccCCHHHHHHHHHH
Confidence            3478999999999987  45899999999999999999965 5676544  44455566667777888999999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032788           94 LQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        94 l~~~p~~R~s~~~~l~~  110 (133)
                      |..||++||++++++++
T Consensus       263 l~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         263 WREKPYERPSFAQILVS  279 (309)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             cCCChhHCcCHHHHHHH
Confidence            99999999999999876

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=5e-19  Score=118.40  Aligned_cols=91  Identities=18%  Similarity=0.300  Sum_probs=76.0

Q ss_pred             cccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH---HHHHHHHhCCCCCCCCCCCHHHHHHHHHHc
Q 032788           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WALFKIARGELPPIPDSVSRDARDFILKCL   94 (133)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   94 (133)
                      ..||..|+|||.+..  ..++.++||||+|+++||++++..||....   .....+..+..+..+..++..+.+++.+||
T Consensus       194 ~~gt~~y~aPE~~~~--~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~p~~~~~~l~~li~~cl  271 (311)
T d1r0pa_         194 AKLPVKWMALESLQT--QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW  271 (311)
T ss_dssp             SSCCGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             ccccccccChHHHhc--CCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCcccCcHHHHHHHHHHc
Confidence            478999999999987  458999999999999999999777765533   334455667777778888999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032788           95 QVNPNDRPTAAQLMEH  110 (133)
Q Consensus        95 ~~~p~~R~s~~~~l~~  110 (133)
                      ..||.+||++.|++++
T Consensus       272 ~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         272 HPKAEMRPSFSELVSR  287 (311)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             CCCHhHCcCHHHHHHH
Confidence            9999999999999887

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=9e-19  Score=116.97  Aligned_cols=93  Identities=23%  Similarity=0.383  Sum_probs=78.9

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhC-CCCCCChH--HHHHHHHhCCCCCCCCCCCHHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILK   92 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~-~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (133)
                      ....||+.|++||.+..  ..++.++|+||+|+++|+++++ ..||.+..  ..+..+.++.....+..++..+.+++.+
T Consensus       193 ~~~~~t~~y~aPe~l~~--~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~  270 (308)
T d1p4oa_         193 GKGLLPVRWMSPESLKD--GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRM  270 (308)
T ss_dssp             GSSEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred             cceecccccCCHHHHcc--CCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCCCCCCcccchHHHHHHHHH
Confidence            34578999999999987  4589999999999999999987 46676544  4556666777777788899999999999


Q ss_pred             HcccCCCCCCCHHHHhhC
Q 032788           93 CLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        93 ~l~~~p~~R~s~~~~l~~  110 (133)
                      ||..+|++|||+++++++
T Consensus       271 cl~~~P~~RPs~~~il~~  288 (308)
T d1p4oa_         271 CWQYNPKMRPSFLEIISS  288 (308)
T ss_dssp             HTCSSGGGSCCHHHHHHH
T ss_pred             HcCCChhHCcCHHHHHHH
Confidence            999999999999999873

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.3e-18  Score=116.25  Aligned_cols=92  Identities=21%  Similarity=0.350  Sum_probs=75.2

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCChH--HHH-HHHHhCCCCCCCCCCCHHHHHHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE--WAL-FKIARGELPPIPDSVSRDARDFIL   91 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~-~~~p~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~   91 (133)
                      ...+||+.|+|||.+..  ..++.++||||+|+++|+|++ |.+++....  ..+ ..+..+..+..+...+..+.+++.
T Consensus       205 ~~~~gt~~y~aPE~~~~--~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~  282 (311)
T d1t46a_         205 GNARLPVKWMAPESIFN--CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK  282 (311)
T ss_dssp             SSSEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHH
T ss_pred             eecccChHHcCHHHhcC--CCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccccHHHHHHHH
Confidence            34589999999999987  458999999999999999998 555554432  333 345566666777788999999999


Q ss_pred             HHcccCCCCCCCHHHHhh
Q 032788           92 KCLQVNPNDRPTAAQLME  109 (133)
Q Consensus        92 ~~l~~~p~~R~s~~~~l~  109 (133)
                      +||..||.+||+++++++
T Consensus       283 ~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         283 TCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             HHTCSSGGGSCCHHHHHH
T ss_pred             HHcCCChhHCcCHHHHHH
Confidence            999999999999999885

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.72  E-value=3.7e-18  Score=113.39  Aligned_cols=96  Identities=13%  Similarity=0.121  Sum_probs=72.0

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHHHHH----HhCCCCCCCCCCCHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WALFKI----ARGELPPIPDSVSRDA   86 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~~~~----~~~~~~~~~~~~~~~~   86 (133)
                      +..+||+.|+|||.+.+  ..++.++||||+|+++|++++|..||....     ......    ...........++.++
T Consensus       171 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  248 (299)
T d1ckia_         171 KNLTGTARYASINTHLG--IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEF  248 (299)
T ss_dssp             CSCCCCSSSCCHHHHTT--BCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHH
T ss_pred             CCcCCCccccCHHHHhC--CCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHH
Confidence            34589999999999987  458999999999999999999999997532     111111    1111122345688999


Q ss_pred             HHHHHHHcccCCCCCCCHHHH---hhCCCC
Q 032788           87 RDFILKCLQVNPNDRPTAAQL---MEHPFV  113 (133)
Q Consensus        87 ~~~~~~~l~~~p~~R~s~~~~---l~~~~~  113 (133)
                      .+++..||..+|++||+++++   +++.|.
T Consensus       249 ~~li~~cl~~~p~~RP~~~~i~~~l~~~~~  278 (299)
T d1ckia_         249 ATYLNFCRSLRFDDKPDYSYLRQLFRNLFH  278 (299)
T ss_dssp             HHHHHHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHccCChhHCcCHHHHHHHHHHHHH
Confidence            999999999999999998754   556544

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.67  E-value=4.6e-17  Score=107.88  Aligned_cols=91  Identities=11%  Similarity=0.089  Sum_probs=69.5

Q ss_pred             hccccccccccccccccCCCCCCchhHHHHHHHHHHHHHhCCCCCCChH-----HHHHHHH----hCCCCCCCCCCCHHH
Q 032788           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WALFKIA----RGELPPIPDSVSRDA   86 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~diws~g~~~~~l~~~~~p~~~~~-----~~~~~~~----~~~~~~~~~~~~~~~   86 (133)
                      ...+||+.|+|||.+.+  ..++.++|+||+|+++|++++|..||.+..     .....+.    ..........++.++
T Consensus       171 ~~~~GT~~y~aPE~~~~--~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l  248 (293)
T d1csna_         171 KNLSGTARYMSINTHLG--REQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEF  248 (293)
T ss_dssp             CCCCSCTTTCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHH
T ss_pred             CceEEchhhcCHHHhcC--CCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHH
Confidence            34589999999999987  458999999999999999999999997532     1111111    111112234678999


Q ss_pred             HHHHHHHcccCCCCCCCHHHHh
Q 032788           87 RDFILKCLQVNPNDRPTAAQLM  108 (133)
Q Consensus        87 ~~~~~~~l~~~p~~R~s~~~~l  108 (133)
                      .+++..|+..+|++||+.+.+.
T Consensus       249 ~~ii~~~~~~~~~~rP~y~~l~  270 (293)
T d1csna_         249 YKYMHYARNLAFDATPDYDYLQ  270 (293)
T ss_dssp             HHHHHHHHHCCTTCCCCHHHHH
T ss_pred             HHHHHHHhcCCcccCcCHHHHH
Confidence            9999999999999999876654

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=3.7e-16  Score=103.94  Aligned_cols=95  Identities=19%  Similarity=0.195  Sum_probs=64.3

Q ss_pred             hccccccccccccccccCCC----CCCchhHHHHHHHHHHHHHhCCCCCCCh----------------HHHHH-HHHh-C
Q 032788           16 KWHVSRWNSLTDQVVNSKNG----GYGLPADIWSVGCTVLEMLTRCRPYFGV----------------EWALF-KIAR-G   73 (133)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~----~~~~~~diws~g~~~~~l~~~~~p~~~~----------------~~~~~-~~~~-~   73 (133)
                      ...+||+.|+|||.+.....    .++.++||||+|+++||+++|..|+...                ..... .... .
T Consensus       170 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (303)
T d1vjya_         170 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK  249 (303)
T ss_dssp             --CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSC
T ss_pred             cceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccc
Confidence            34689999999999875211    1467899999999999999987765320                01122 1211 2


Q ss_pred             CCCCCCCC-----CCHHHHHHHHHHcccCCCCCCCHHHHhhC
Q 032788           74 ELPPIPDS-----VSRDARDFILKCLQVNPNDRPTAAQLMEH  110 (133)
Q Consensus        74 ~~~~~~~~-----~~~~~~~~~~~~l~~~p~~R~s~~~~l~~  110 (133)
                      ..+..+..     ....+.+++.+||..||.+|||+.|++++
T Consensus       250 ~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~  291 (303)
T d1vjya_         250 LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             CCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             cCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            22222222     12458899999999999999999998763