Citrus Sinensis ID: 032856

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130--
Protein Sequence
MSVEGDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Secondary Structure (PSIPRED)
ccccccccccEEcEEEEEcccHHHHHHHHHHccccEEEcEEcccccccEEEEEEcccEEEEEEEccccccccccccccccccEEEEEEccHHHHHHHHHHcccEEEEccccccEEEEEcccccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccccccEEEEEEEEEccHHHHHHHHHHHHccEEEHccHHHcccccHccccccccEEEEEcccccccccccccHccccccEEEEEccHHHHHHHHHHcccEEEEEccccEEEEEcccccccEEEEEEcc
Coil and Loop (DISEMBL)
msvegdygvVSVHHVGILCENLERSLEFYQNILGLeinearphdklpyrgaWLWVGAEMIhlmelpnpdplsgrpehggrdrhtciaIRDVSKLKMILDKAGisytlsksgrpaiftrdpdanaleftqvdg
Flexible Loop (DISEMBL)
msvegdygvvSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIsytlsksgrpaiftrdpdanaleftqvdg
Low Complexity Region (SEG)
MSVEGDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Disordered region (IsUnstruct)
*****DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL*****************HTCIAIRDVSKLKMILDKAGISYTLS************************
Disordered Region (DISOPRED)
*****DY**VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD*
Disordered Region (DISEMBL)
MSVEGDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS********DRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Disordered Region (DISPRO)
****GDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSVEGDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	132	2.2.26 [Sep-21-2011]
P45871	128	Uncharacterized protein Y	yes	no	0.871	0.898	0.305	3e-07
Q96PE7	176	Methylmalonyl-CoA epimera	yes	no	0.780	0.585	0.304	2e-05
Q9D1I5	178	Methylmalonyl-CoA epimera	yes	no	0.840	0.623	0.256	0.0002
Q2KIZ3	175	Methylmalonyl-CoA epimera	yes	no	0.810	0.611	0.264	0.0008
P52096	129	Uncharacterized protein Y	N/A	no	0.916	0.937	0.251	0.0008

>sp|P45871|YWKD_BACSU Uncharacterized protein YwkD OS=Bacillus subtilis (strain 168) GN=ywkD PE=4 SV=1

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 6/121 (4%)

Query: 11  SVHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 69
           S+HH+ I+C + E+S  FY + LG + I E    ++  Y+      G+ +I L   P+P 
Sbjct: 5   SIHHIAIICSDYEKSKAFYVHKLGFQVIQETYREERGSYKLDLSLNGSYVIELFSFPDPP 64

Query: 70  PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY----TLSKSGRPAIFTRDPDANAL 125
               RPE  G  RH    +  + K    L + GI      T   +G+   F  DPD   L
Sbjct: 65  ERQTRPEAAGL-RHLAFTVGSLDKAVQELHEKGIETEPIRTDPLTGKRFTFFFDPDQLPL 123

Query: 126 E 126
           E
Sbjct: 124 E 124

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|Q96PE7|MCEE_HUMAN Methylmalonyl-CoA epimerase, mitochondrial OS=Homo sapiens GN=MCEE PE=1 SV=1

 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 22/125 (17%)

Query: 12  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHL----MELPN 67
           ++HV I   +LE++  FY+NILG +++EA P   LP  G    V    ++L    MEL +
Sbjct: 48  LNHVAIAVPDLEKAAAFYKNILGAQVSEAVP---LPEHG----VSVVFVNLGNTKMELLH 100

Query: 68  P----DPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGI-----SYTLSKSGRPAIF 116
           P     P++G  +    G   H CI + +++   M L K  I        +   G+P IF
Sbjct: 101 PLGRDSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIF 160

Query: 117 TRDPD 121
               D
Sbjct: 161 LHPKD 165

Homo sapiens (taxid: 9606)

EC: 5

EC: .

EC: 1

EC: .

EC: 9

EC: 9

EC: .

EC: 1

>sp|Q9D1I5|MCEE_MOUSE Methylmalonyl-CoA epimerase, mitochondrial OS=Mus musculus GN=Mcee PE=2 SV=1

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 14/125 (11%)

Query: 12  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRG---AWLWVGAEMIHLME-LPN 67
           ++HV +   +LE++  FY+++LG +++E  P   LP  G    ++ +G   + L+  L +
Sbjct: 50  LNHVAVAVPDLEKASSFYRDVLGAQVSEVVP---LPEHGVSVVFVNLGNTKMELLHPLGS 106

Query: 68  PDPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGI-----SYTLSKSGRPAIFTRDP 120
             P++G  +    G   H CI + ++S   M L K  I        +   G+P IF    
Sbjct: 107 DSPITGFLQKNKAGGMHHVCIEVDNISAAVMDLKKKKIRSLSDEAKIGAHGKPVIFLHPK 166

Query: 121 DANAL 125
           D   +
Sbjct: 167 DCGGV 171

Mus musculus (taxid: 10090)

EC: 5

EC: .

EC: 1

EC: .

EC: 9

EC: 9

EC: .

EC: 1

>sp|Q2KIZ3|MCEE_BOVIN Methylmalonyl-CoA epimerase, mitochondrial OS=Bos taurus GN=MCEE PE=2 SV=1

 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 14/121 (11%)

Query: 12  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRG---AWLWVGAEMIHLME-LPN 67
           ++HV +   +LE++  FY+N+LG E+ E  P   LP  G    ++ +G   + L+  L +
Sbjct: 47  LNHVAVAVPDLEKARAFYKNVLGAEVGEPVP---LPEHGVSVVFVNLGNTKMELLHPLGS 103

Query: 68  PDPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGI-----SYTLSKSGRPAIFTRDP 120
             P++G  +    G   H CI + +++   M L +  I        +   G+P IF    
Sbjct: 104 DSPIAGFLKKNKAGGMHHVCIEVDNINVAVMDLKEKKIRILSEEAKIGAHGKPVIFLHPS 163

Query: 121 D 121
           D
Sbjct: 164 D 164

Bos taurus (taxid: 9913)

EC: 5

EC: .

EC: 1

EC: .

EC: 9

EC: 9

EC: .

EC: 1

>sp|P52096|YAER_ECOLI Uncharacterized protein YaeR OS=Escherichia coli (strain K12) GN=yaeR PE=4 SV=1

 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 6/127 (4%)

Query: 8   GVVSVHHVGILCENLERSLEFYQNILGLEI-NEARPHDKLPYRGAWLWVGAEMIHLMELP 66
           G+  VHH+ I+  +   S  FY +ILG  + +E     +  ++G     G  +I L   P
Sbjct: 3   GLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFP 62

Query: 67  NPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDA 122
            P     RPE  G  RH   ++ D+      L+   +     +    + +   F  DPD 
Sbjct: 63  FPPERPSRPEACGL-RHLAFSVDDIDAAVAHLESHNVKCETIRVDPYTQKRFTFFNDPDG 121

Query: 123 NALEFTQ 129
             LE  +
Sbjct: 122 LPLELYE 128

Escherichia coli (strain K12) (taxid: 83333)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	132
388493084	200	unknown [Lotus japonicus]	0.962	0.635	0.913	6e-66
15242020	197	Lactoylglutathione lyase / glyoxalase I	0.946	0.634	0.928	2e-65
449489903	206	PREDICTED: uncharacterized LOC101203815	1.0	0.640	0.893	2e-65
449452528	175	PREDICTED: uncharacterized protein LOC10	1.0	0.754	0.893	3e-65
297796591	196	lactoylglutathione lyase family protein	0.946	0.637	0.928	4e-65
356547897	209	PREDICTED: uncharacterized protein LOC10	0.969	0.612	0.890	1e-64
359807103	206	uncharacterized protein LOC100805881 [Gl	0.977	0.626	0.891	1e-64
226495911	193	glyoxalase/bleomycin resistance protein/	0.984	0.673	0.884	2e-64
358347730	129	Glyoxalase/bleomycin resistance protein/	0.946	0.968	0.904	1e-63
357134368	186	PREDICTED: uncharacterized protein ywkD-	0.977	0.693	0.844	5e-61

>gi|388493084|gb|AFK34608.1| unknown [Lotus japonicus]

 Score =  254 bits (650), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 116/127 (91%), Positives = 124/127 (97%)

Query: 5   GDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLME 64
            DYGVVS+HHVGILCENLER L+FYQN+LGLEINEARPHDKLPYRGAWLWVG+EMIHLME
Sbjct: 73  SDYGVVSIHHVGILCENLERPLDFYQNVLGLEINEARPHDKLPYRGAWLWVGSEMIHLME 132

Query: 65  LPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANA 124
           LPNPDPL+GRP+HGGRDRHTCIAIRDVSKLK ILDKAGISYTLS+SGRPAIFTRDPDANA
Sbjct: 133 LPNPDPLTGRPQHGGRDRHTCIAIRDVSKLKAILDKAGISYTLSRSGRPAIFTRDPDANA 192

Query: 125 LEFTQVD 131
           LEFTQ+D
Sbjct: 193 LEFTQID 199

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242020|ref|NP_200514.1| Lactoylglutathione lyase / glyoxalase I family protein [Arabidopsis thaliana] gi|8777444|dbj|BAA97034.1| unnamed protein product [Arabidopsis thaliana] gi|21594695|gb|AAM66034.1| unknown [Arabidopsis thaliana] gi|88193792|gb|ABD42985.1| At5g57040 [Arabidopsis thaliana] gi|110742698|dbj|BAE99260.1| hypothetical protein [Arabidopsis thaliana] gi|332009455|gb|AED96838.1| Lactoylglutathione lyase / glyoxalase I family protein [Arabidopsis thaliana]

 Score =  253 bits (646), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 116/125 (92%), Positives = 121/125 (96%)

Query: 6   DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 65
           DYGVV VHHVG+LCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG+EMIHLMEL
Sbjct: 73  DYGVVGVHHVGLLCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGSEMIHLMEL 132

Query: 66  PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANAL 125
           PNPDPL+GRPEHGGRDRH CIAIRDVS LK ILDKAGI+YT+SKSGRPAIFTRDPDANAL
Sbjct: 133 PNPDPLTGRPEHGGRDRHACIAIRDVSNLKEILDKAGIAYTMSKSGRPAIFTRDPDANAL 192

Query: 126 EFTQV 130
           EFTQV
Sbjct: 193 EFTQV 197

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449489903|ref|XP_004158454.1| PREDICTED: uncharacterized LOC101203815 [Cucumis sativus]

 Score =  253 bits (645), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 118/132 (89%), Positives = 123/132 (93%)

Query: 1   MSVEGDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMI 60
           + VE DYG V VHHVG+LCENLERSL FY NILGL+INEARPHDKLPYRGAWLWVGAEMI
Sbjct: 75  IDVENDYGAVGVHHVGVLCENLERSLHFYLNILGLQINEARPHDKLPYRGAWLWVGAEMI 134

Query: 61  HLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDP 120
           HLMELPNPDPL+GRPEHGGRDRHTC+ IRDVSKLK ILDKAGI YTLSKSGRPAIFTRDP
Sbjct: 135 HLMELPNPDPLTGRPEHGGRDRHTCLGIRDVSKLKAILDKAGIPYTLSKSGRPAIFTRDP 194

Query: 121 DANALEFTQVDG 132
           DANALEFTQVDG
Sbjct: 195 DANALEFTQVDG 206

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452528|ref|XP_004144011.1| PREDICTED: uncharacterized protein LOC101203815 [Cucumis sativus]

 Score =  252 bits (644), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 118/132 (89%), Positives = 123/132 (93%)

Query: 1   MSVEGDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMI 60
           + VE DYG V VHHVG+LCENLERSL FY NILGL+INEARPHDKLPYRGAWLWVGAEMI
Sbjct: 44  IDVENDYGAVGVHHVGVLCENLERSLHFYLNILGLQINEARPHDKLPYRGAWLWVGAEMI 103

Query: 61  HLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDP 120
           HLMELPNPDPL+GRPEHGGRDRHTC+ IRDVSKLK ILDKAGI YTLSKSGRPAIFTRDP
Sbjct: 104 HLMELPNPDPLTGRPEHGGRDRHTCLGIRDVSKLKAILDKAGIPYTLSKSGRPAIFTRDP 163

Query: 121 DANALEFTQVDG 132
           DANALEFTQVDG
Sbjct: 164 DANALEFTQVDG 175

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297796591|ref|XP_002866180.1| lactoylglutathione lyase family protein [Arabidopsis lyrata subsp. lyrata] gi|297312015|gb|EFH42439.1| lactoylglutathione lyase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  252 bits (643), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 116/125 (92%), Positives = 121/125 (96%)

Query: 6   DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 65
           DYGVV VHHVG+LCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG+EMIHLMEL
Sbjct: 72  DYGVVGVHHVGLLCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGSEMIHLMEL 131

Query: 66  PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANAL 125
           PNPDPL+GRPEHGGRDRH CIAIRDVS LK ILDKAGI+YT+SKSGRPAIFTRDPDANAL
Sbjct: 132 PNPDPLTGRPEHGGRDRHACIAIRDVSNLKEILDKAGIAYTMSKSGRPAIFTRDPDANAL 191

Query: 126 EFTQV 130
           EFTQV
Sbjct: 192 EFTQV 196

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547897|ref|XP_003542341.1| PREDICTED: uncharacterized protein LOC100788142 [Glycine max]

 Score =  250 bits (639), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 114/128 (89%), Positives = 123/128 (96%)

Query: 4   EGDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLM 63
           E DYGVV +HHVGILCENLERSL+FYQN+LGL+INEARPH+KLPYRGAWLWVG+EMIHLM
Sbjct: 81  ESDYGVVCMHHVGILCENLERSLDFYQNVLGLKINEARPHNKLPYRGAWLWVGSEMIHLM 140

Query: 64  ELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDAN 123
           ELPNPDPL+GRP+HGGRDRHTCIAIRDVSKLK I DKAGI+YTLS SGRPAIFTRDPDAN
Sbjct: 141 ELPNPDPLTGRPQHGGRDRHTCIAIRDVSKLKAIFDKAGIAYTLSHSGRPAIFTRDPDAN 200

Query: 124 ALEFTQVD 131
           ALEFTQVD
Sbjct: 201 ALEFTQVD 208

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807103|ref|NP_001241602.1| uncharacterized protein LOC100805881 [Glycine max] gi|255638057|gb|ACU19343.1| unknown [Glycine max]

 Score =  250 bits (639), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 115/129 (89%), Positives = 121/129 (93%)

Query: 4   EGDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLM 63
           E DYGVV +HHVGILCENLERSLEFYQN+LGL+INEARPHDKLPYRGAWLWVG+EMIHLM
Sbjct: 78  ESDYGVVCMHHVGILCENLERSLEFYQNVLGLKINEARPHDKLPYRGAWLWVGSEMIHLM 137

Query: 64  ELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDAN 123
           ELPNPDPL+GR +HGGRDRHTCIAIRDVSKLK I DKAGI YTLS SGRPAIF RDPDAN
Sbjct: 138 ELPNPDPLTGRAQHGGRDRHTCIAIRDVSKLKAIFDKAGIPYTLSHSGRPAIFARDPDAN 197

Query: 124 ALEFTQVDG 132
           ALEFTQVDG
Sbjct: 198 ALEFTQVDG 206

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226495911|ref|NP_001147026.1| glyoxalase/bleomycin resistance protein/dioxygenase [Zea mays] gi|195606588|gb|ACG25124.1| glyoxalase/bleomycin resistance protein/dioxygenase [Zea mays]

 Score =  249 bits (637), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 115/130 (88%), Positives = 123/130 (94%)

Query: 1   MSVEGDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMI 60
           ++ + DYGVV VHHVG+LCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG+EMI
Sbjct: 64  LNNKTDYGVVGVHHVGLLCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGSEMI 123

Query: 61  HLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDP 120
           HLMELPNPDPL+GRPEHGGRDRH CIAIRDVS LK ILDKAGI+YT+SKSGRPAIFTRDP
Sbjct: 124 HLMELPNPDPLTGRPEHGGRDRHACIAIRDVSVLKEILDKAGIAYTMSKSGRPAIFTRDP 183

Query: 121 DANALEFTQV 130
           D NALEFTQV
Sbjct: 184 DTNALEFTQV 193

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358347730|ref|XP_003637907.1| Glyoxalase/bleomycin resistance protein/dioxygenase [Medicago truncatula] gi|355503842|gb|AES85045.1| Glyoxalase/bleomycin resistance protein/dioxygenase [Medicago truncatula]

 Score =  247 bits (630), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 113/125 (90%), Positives = 122/125 (97%)

Query: 7   YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELP 66
           YGVVSVHHVGILCENLERSL+FYQN+LGL+INEARPHDKLPYRG WLWVG+EMIHLMELP
Sbjct: 4   YGVVSVHHVGILCENLERSLDFYQNVLGLKINEARPHDKLPYRGTWLWVGSEMIHLMELP 63

Query: 67  NPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALE 126
           NPDPL+GRP+HGGRDRHTCIAIRDVSKLK ILDKAG+ YTLS+SGRPAIFTRDPDANALE
Sbjct: 64  NPDPLTGRPQHGGRDRHTCIAIRDVSKLKAILDKAGVPYTLSRSGRPAIFTRDPDANALE 123

Query: 127 FTQVD 131
           FTQ+D
Sbjct: 124 FTQID 128

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357134368|ref|XP_003568789.1| PREDICTED: uncharacterized protein ywkD-like [Brachypodium distachyon]

 Score =  238 bits (607), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 109/129 (84%), Positives = 119/129 (92%)

Query: 2   SVEGDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIH 61
           S E +YGVVS+HHVGILCENLERS+ FYQ++LGL++N ARP DKLPYRGAWLWVG+EMIH
Sbjct: 58  SQEPEYGVVSIHHVGILCENLERSIAFYQDLLGLKVNPARPTDKLPYRGAWLWVGSEMIH 117

Query: 62  LMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPD 121
           LMELPNPDPL+GRPEHGGRDRHTCIAI+DV KLK I DKAGISYTLSKSGRPAIF RDPD
Sbjct: 118 LMELPNPDPLTGRPEHGGRDRHTCIAIKDVLKLKEIFDKAGISYTLSKSGRPAIFARDPD 177

Query: 122 ANALEFTQV 130
            NALEFTQV
Sbjct: 178 GNALEFTQV 186

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	132
TAIR|locus:2164600	197	AT5G57040 "AT5G57040" [Arabido	0.946	0.634	0.928	4.8e-62
TAIR|locus:2016254	167	GLYI7 "AT1G80160" [Arabidopsis	0.916	0.724	0.304	1.9e-12
TAIR|locus:2037728	174	GLYI4 "AT1G15380" [Arabidopsis	0.916	0.695	0.304	1e-11
TIGR_CMR|BA_0607	128	BA_0607 "glyoxylase family pro	0.886	0.914	0.344	1.3e-11
TAIR|locus:2057522	184	GLYI8 "AT2G28420" [Arabidopsis	0.878	0.630	0.296	7.6e-09
UNIPROTKB|Q9KL58	127	VC_A0890 "Glyoxylase I family	0.871	0.905	0.296	1.1e-07
TIGR_CMR|VC_A0890	127	VC_A0890 "glyoxylase I family	0.871	0.905	0.296	1.1e-07
UNIPROTKB|E2REA1	189	MCEE "Uncharacterized protein"	0.833	0.582	0.285	2.3e-07
TIGR_CMR|CPS_2825	128	CPS_2825 "glyoxylase family pr	0.886	0.914	0.284	3.8e-07
UNIPROTKB|Q96PE7	176	MCEE "Methylmalonyl-CoA epimer	0.833	0.625	0.293	6.1e-07

TAIR|locus:2164600 AT5G57040 "AT5G57040" [Arabidopsis thaliana (taxid:3702)]

 Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
 Identities = 116/125 (92%), Positives = 121/125 (96%)

Query:     6 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 65
             DYGVV VHHVG+LCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG+EMIHLMEL
Sbjct:    73 DYGVVGVHHVGLLCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGSEMIHLMEL 132

Query:    66 PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANAL 125
             PNPDPL+GRPEHGGRDRH CIAIRDVS LK ILDKAGI+YT+SKSGRPAIFTRDPDANAL
Sbjct:   133 PNPDPLTGRPEHGGRDRHACIAIRDVSNLKEILDKAGIAYTMSKSGRPAIFTRDPDANAL 192

Query:   126 EFTQV 130
             EFTQV
Sbjct:   193 EFTQV 197

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2016254 GLYI7 "AT1G80160" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 39/128 (30%), Positives = 64/128 (50%)

Query:     9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 68
             + S++H+ +LC ++E S+ FYQN+LG  +   RP D   + GAWL+     IHL++ P P
Sbjct:    11 IKSLNHISLLCRSVEESISFYQNVLGF-LPIRRP-DSFDFDGAWLFGHGIGIHLLQSPEP 68

Query:    69 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT---LSKSGRPA--IFTRDPDAN 123
             + L  + E   +D H       +  ++  L +  I Y    + + G     +F  DPDA 
Sbjct:    69 EKLLKKTEINPKDNHISFQCESMEAVEKKLKEMEIEYVRAVVEEGGIQVDQLFFHDPDAF 128

Query:   124 ALEFTQVD 131
              +E    D
Sbjct:   129 MIEICNCD 136

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009414 "response to water deprivation" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2037728 GLYI4 "AT1G15380" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 39/128 (30%), Positives = 63/128 (49%)

Query:     9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 68
             + S++HV +LC +++ S+ FYQ +LG  I   RP + L + GAWL+     IHL+  P P
Sbjct:    11 LTSLNHVSVLCRSVDESMNFYQKVLGF-IPIRRP-ESLNFEGAWLFGHGIGIHLLCAPEP 68

Query:    69 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT--LSKSGR---PAIFTRDPDAN 123
             + L  +     +D H       +  ++  L++ GI Y   L + G      +F  DPD  
Sbjct:    69 EKLPKKTAINPKDNHISFQCESMGVVEKKLEEMGIDYVRALVEEGGIQVDQLFFHDPDGF 128

Query:   124 ALEFTQVD 131
              +E    D
Sbjct:   129 MIEICNCD 136

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

TIGR_CMR|BA_0607 BA_0607 "glyoxylase family protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 43/125 (34%), Positives = 61/125 (48%)

Query:    12 VHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAE-MIHLMELPNPD 69
             VHHV I+C N E S +FY  ILG + INE    ++  Y+   L VG E  I L   PNP 
Sbjct:     6 VHHVAIICSNYEVSKDFYTRILGFKAINEVYRKERDSYK-LDLCVGKEYQIELFSFPNPP 64

Query:    70 PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANAL 125
                  PE  G  RH   A+ ++ +    L + G+     +    +G+  +F +DPD   L
Sbjct:    65 KRPSFPEAAGL-RHLAFAVTNIEEAVQDLSQCGVETEAIRIDEITGKKFVFFQDPDGLPL 123

Query:   126 EFTQV 130
             E  +V
Sbjct:   124 ELYEV 128

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

TAIR|locus:2057522 GLYI8 "AT2G28420" [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 37/125 (29%), Positives = 61/125 (48%)

Query:     9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 68
             +++++HV  LC+++++SLEFY  +LG  +   RP     + GAWL+     IHL++  + 
Sbjct:    18 LMALNHVSRLCKDVKKSLEFYTKVLGF-VEIERPAS-FDFDGAWLFNYGVGIHLVQAKDQ 75

Query:    69 DPLSGRPEH-GGRDRHTCIAIRDVSKLKMILDKAGISY---TLSKSGRPAI---FTRDPD 121
             D L    +H    D H      D+  L+  L +  + Y   T+      AI   F  DPD
Sbjct:    76 DKLPSDTDHLDPMDNHISFQCEDMEALEKRLKEVKVKYIKRTVGDEKDAAIDQLFFNDPD 135

Query:   122 ANALE 126
                +E
Sbjct:   136 GFMVE 140

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009845 "seed germination" evidence=RCA

GO:0016114 "terpenoid biosynthetic process" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

UNIPROTKB|Q9KL58 VC_A0890 "Glyoxylase I family protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 37/125 (29%), Positives = 52/125 (41%)

Query:    12 VHHVGILCENLERSLEFYQNILGLEI---NEARPHDKLPYRGAWLWVGAEMIHLMELPNP 68
             +HH  I+C +  RS  FY  ILGL +   N     D   Y+          I L   P  
Sbjct:     5 IHHAAIICSDYPRSKAFYTEILGLRVLAENYRAARDS--YKLDLALPDGSQIELFSFPKA 62

Query:    69 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANA 124
                   PE  G  RH    + DV+++K  L++ G+S    +    +G+   F  DPD   
Sbjct:    63 PERPSFPEAQGL-RHLAFVVDDVAEIKAQLEQQGVSVEPIRIDEYTGKAYTFFADPDGLP 121

Query:   125 LEFTQ 129
             LE  Q
Sbjct:   122 LELYQ 126

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|VC_A0890 VC_A0890 "glyoxylase I family protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 37/125 (29%), Positives = 52/125 (41%)

Query:    12 VHHVGILCENLERSLEFYQNILGLEI---NEARPHDKLPYRGAWLWVGAEMIHLMELPNP 68
             +HH  I+C +  RS  FY  ILGL +   N     D   Y+          I L   P  
Sbjct:     5 IHHAAIICSDYPRSKAFYTEILGLRVLAENYRAARDS--YKLDLALPDGSQIELFSFPKA 62

Query:    69 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANA 124
                   PE  G  RH    + DV+++K  L++ G+S    +    +G+   F  DPD   
Sbjct:    63 PERPSFPEAQGL-RHLAFVVDDVAEIKAQLEQQGVSVEPIRIDEYTGKAYTFFADPDGLP 121

Query:   125 LEFTQ 129
             LE  Q
Sbjct:   122 LELYQ 126

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|E2REA1 MCEE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 36/126 (28%), Positives = 62/126 (49%)

Query:    12 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGA---WLWVGAEMIHLME-LPN 67
             ++H+ +   +LE++  FY+NILG +I+E  P   LP  G    ++ +G   + L+  L N
Sbjct:    61 LNHIAVAVPDLEKAKAFYKNILGAQISEVVP---LPEHGVSVVFVNLGNTKMELLHPLGN 117

Query:    68 PDPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS------GRPAIFTRD 119
               P++G  +    G   H CI + D++   M L +  I  +LS+       G+P IF   
Sbjct:   118 DSPIAGFLQKNKAGGMHHICIEVDDINAAVMDLKEKNIR-SLSEETKIGAHGKPVIFLHP 176

Query:   120 PDANAL 125
              D   +
Sbjct:   177 KDCGGI 182

GO:0046491 "L-methylmalonyl-CoA metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0004493 "methylmalonyl-CoA epimerase activity" evidence=IEA

TIGR_CMR|CPS_2825 CPS_2825 "glyoxylase family protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 35/123 (28%), Positives = 53/123 (43%)

Query:    12 VHHVGILCENLERSLEFYQNILGLEI-NEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 70
             +HHV I+C + E+S +FY  ILG +I  E    D+  ++          I L   P+   
Sbjct:     5 IHHVAIICSDYEKSKDFYTRILGFKIIAENYRADRDSFKLDLALADGTQIELFSFPDAPK 64

Query:    71 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGI---SYTLSK-SGRPAIFTRDPDANALE 126
                 PE  G  RH    + +V  +   L   G+   S  + + +G+   F  DPD   LE
Sbjct:    65 RPSFPEAQGL-RHLAFNVENVEAVSQYLTNLGVDVESIRVDEYTGKQFTFFSDPDGLPLE 123

Query:   127 FTQ 129
               Q
Sbjct:   124 LYQ 126

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

UNIPROTKB|Q96PE7 MCEE "Methylmalonyl-CoA epimerase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 37/126 (29%), Positives = 62/126 (49%)

Query:    12 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGA---WLWVGAEMIHLME-LPN 67
             ++HV I   +LE++  FY+NILG +++EA P   LP  G    ++ +G   + L+  L  
Sbjct:    48 LNHVAIAVPDLEKAAAFYKNILGAQVSEAVP---LPEHGVSVVFVNLGNTKMELLHPLGR 104

Query:    68 PDPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS------GRPAIFTRD 119
               P++G  +    G   H CI + +++   M L K  I  +LS+       G+P IF   
Sbjct:   105 DSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIR-SLSEEVKIGAHGKPVIFLHP 163

Query:   120 PDANAL 125
              D   +
Sbjct:   164 KDCGGV 169

GO:0046491 "L-methylmalonyl-CoA metabolic process" evidence=IDA

GO:0004493 "methylmalonyl-CoA epimerase activity" evidence=IDA

GO:0005759 "mitochondrial matrix" evidence=TAS

GO:0006635 "fatty acid beta-oxidation" evidence=TAS

GO:0019626 "short-chain fatty acid catabolic process" evidence=TAS

GO:0044255 "cellular lipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P45871	YWKD_BACSU	No assigned EC number	0.3057	0.8712	0.8984	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.13.11.39	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT5G57040	lactoylglutathione lyase family protein / glyoxalase I family protein; lactoylglutathione lyase family protein / glyoxalase I family protein; FUNCTIONS IN- catalytic activity; INVOLVED IN- metabolic process; LOCATED IN- chloroplast; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro-IPR004360); BEST Arabidopsis thaliana protein match is- lactoylglutathione lyase family protein / glyoxalase I family protein (TAIR-AT1G80160.1); Has 744 Blast hits to 744 proteins in 277 species- A [...] (197 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT2G45870	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (410 aa)							•		0.883
	AT1G65230	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (286 aa)				•			•		0.832
	AT2G12280	ligase, putative; ligase, putative; FUNCTIONS IN- formate-tetrahydrofolate ligase activity, lig [...] (90 aa)							•		0.825
	AT2G12200	ligase, putative; ligase, putative; FUNCTIONS IN- formate-tetrahydrofolate ligase activity, lig [...] (63 aa)							•		0.825
	AT2G42750	DNAJ heat shock N-terminal domain-containing protein; DNAJ heat shock N-terminal domain-contain [...] (344 aa)				•			•		0.785
	AT5G03880	electron carrier; electron carrier; FUNCTIONS IN- electron carrier activity; INVOLVED IN- cell [...] (339 aa)				•					0.698
	AT5G37360	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (309 aa)				•					0.690
	MSRB1	MSRB1 (methionine sulfoxide reductase B 1); peptide-methionine-(S)-S-oxide reductase; methionin [...] (202 aa)				•					0.681
	AT1G52870	peroxisomal membrane protein-related; peroxisomal membrane protein-related; FUNCTIONS IN- molec [...] (366 aa)				•					0.677
	AT5G57345	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (188 aa)				•					0.667

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	132
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	3e-34
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	1e-12
cd08352	125	cd08352, Glo_EDI_BRP_like_1, This conserved domain	1e-11
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	1e-11
cd08354	122	cd08354, Glo_EDI_BRP_like_13, This conserved domai	4e-11
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	2e-10
PRK11478	129	PRK11478, PRK11478, putative lyase; Provisional	3e-08
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	1e-07
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	2e-07
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	3e-06
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	1e-05
TIGR03081	128	TIGR03081, metmalonyl_epim, methylmalonyl-CoA epim	2e-05
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	3e-05
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	7e-04
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	0.001
cd07244	121	cd07244, FosA, FosA, a Fosfomycin resistance prote	0.004
cd07242	128	cd07242, Glo_EDI_BRP_like_6, This conserved domain	0.004
cd08357	125	cd08357, Glo_EDI_BRP_like_18, This conserved domai	0.004

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score =  115 bits (289), Expect = 3e-34
 Identities = 44/120 (36%), Positives = 59/120 (49%), Gaps = 10/120 (8%)

Query: 12  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDP 70
           + HV +   +LE S  FY ++LGLE     P     + GAWL+ G    +HL+E   PD 
Sbjct: 1   LDHVALRVPDLEASRAFYTDVLGLEEGPRPPF---LFPGAWLYAGDGPQLHLIEEDPPDA 57

Query: 71  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEF 127
           L   PE  GRD H    + D+   +  L  AG+ YT S     G   +F RDPD N +E 
Sbjct: 58  L---PEGPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPGDGVRQLFVRDPDGNRIEL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 59.7 bits (145), Expect = 1e-12
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 5/120 (4%)

Query: 12  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 71
           + HV +   +LE+SL+FY ++LG ++ E     + P R A+   G  ++ L+    P P 
Sbjct: 2   IDHVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFFTAGGRVLELLLNETPPPA 61

Query: 72  SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEF 127
           +              ++ DV      L  AG+           G    + RDPD N +E 
Sbjct: 62  AAGFGGHHI-AFIAFSVDDVDAAYDRLKAAGVEIVREPGRHGWGGRYSYFRDPDGNLIEL 120

Length = 120

>gnl|CDD|211358 cd08352, Glo_EDI_BRP_like_1, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 57.3 bits (139), Expect = 1e-11
 Identities = 39/128 (30%), Positives = 53/128 (41%), Gaps = 14/128 (10%)

Query: 11  SVHHVGILCENLERSLEFYQNILGLEI-NEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 69
            +HHV I+C +  RS EFY  +LGL +  E    ++  Y+      G   I L   PNP 
Sbjct: 3   GIHHVAIICSDYARSKEFYVEVLGLTLIRETYRPERKSYKLDLALNGEYQIELFSFPNPP 62

Query: 70  PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIS--------YTLSKSGRPAIFTRDPD 121
           P    PE  G  RH   A+ D+      L   G+         +T    G+   F  DPD
Sbjct: 63  PRPSYPEACGL-RHLAFAVEDIEAAVAELKAHGVEVEPIRVDEFT----GKRFTFFYDPD 117

Query: 122 ANALEFTQ 129
              LE  +
Sbjct: 118 GLPLELYE 125

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 57.0 bits (138), Expect = 1e-11
 Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 12/118 (10%)

Query: 14  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 73
           HVG+   +LE ++ FY+++LG E+      D      A+L +G   + L E   P     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEV---LERDGGGAEFAFLRLGGTRLELFEGDEP----- 52

Query: 74  RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEF 127
            P  GG   H    + DV      L  AG+         P      + RDPD N +E 
Sbjct: 53  APPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGGPREEPWGGRVAYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|176702 cd08354, Glo_EDI_BRP_like_13, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 55.8 bits (135), Expect = 4e-11
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 13/116 (11%)

Query: 20  ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGR-PEH 77
           ++LE +  FY+++LGLE        K   R A+ WVG   M+ L +        G  P H
Sbjct: 9   DDLEAAEAFYEDVLGLE-----LMLKEDRRLAFFWVGGRGMLLLFDPGATSTPGGEIPPH 63

Query: 78  GGRDR-HTCIAIR--DVSKLKMILDKAGI---SYTLSKSGRPAIFTRDPDANALEF 127
           GG    H   AI   ++++ +  L+  G+   S      G  +++ RDPD N LE 
Sbjct: 64  GGSGPGHFAFAIPAEELAEWEAHLEAKGVAIESEVQWPRGGRSLYFRDPDGNLLEL 119

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 122

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 54.4 bits (130), Expect = 2e-10
 Identities = 31/136 (22%), Positives = 48/136 (35%), Gaps = 18/136 (13%)

Query: 12  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL------ 65
           +HHV +   +LE S++FY ++LGL + +   ++     G  L          EL      
Sbjct: 3   IHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGF 62

Query: 66  -------PNPDPLSGRPEHGGRDRHTCIAIRD---VSKLKMILDKAGISYTLSKSGRPA- 114
                     D   G P       H    + D          LD  G+   L + GR   
Sbjct: 63  EGRAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRGGV 122

Query: 115 -IFTRDPDANALEFTQ 129
            ++ RDPD   +E   
Sbjct: 123 HVYFRDPDGILIELAT 138

Length = 138

>gnl|CDD|183156 PRK11478, PRK11478, putative lyase; Provisional

 Score = 48.7 bits (116), Expect = 3e-08
 Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 6/127 (4%)

Query: 8   GVVSVHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAEMIHLMELP 66
           G+  VHH+ I+  +   S  FY +ILG    +E     +  ++G     G  +I L   P
Sbjct: 3   GLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFP 62

Query: 67  NPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDA 122
            P     RPE  G  RH   ++ D+      L+   +     +    + +   F  DPD 
Sbjct: 63  FPPERPSRPEACGL-RHLAFSVDDIDAAVAHLESHNVKCEAIRVDPYTQKRFTFFNDPDG 121

Query: 123 NALEFTQ 129
             LE  +
Sbjct: 122 LPLELYE 128

Length = 129

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 46.7 bits (111), Expect = 1e-07
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 11/115 (9%)

Query: 17  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 76
           +   +LE +  FY+ +LG E+ E    +   +R   +      I L+ LP PD       
Sbjct: 1   LPVSDLEAARAFYEELLGFEVEE-EDGEYAEFRLGLVLALGGFIELIGLPEPDA------ 53

Query: 77  HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEF 127
            GG   H    + D+  L   L  AG +        P      + RDPD N +E 
Sbjct: 54  PGGGGVHLYFEVDDLDALVARLKAAGGTILEPPEDTPWGGREFYVRDPDGNLIEL 108

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 12/127 (9%)

Query: 12  VHHVGILCENLERSLEFYQNILGLE-----INEARPHDKLPYRGAWLWVGAEMIHLMELP 66
           +HHV ++  + + +++FY ++LGL      +N+  P     + G  L     ++   E P
Sbjct: 2   LHHVTLVTRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWP 61

Query: 67  NPDPLSGRPEHGGRDRHTCIAIRDVSKL---KMILDKAGISYT--LSKSGRPAIFTRDPD 121
           +  P  GR   G    H   ++   + L   +  L  AG+  +  + + G  +++  DPD
Sbjct: 62  DAGP-KGRRGPGQI-HHIAFSVPSEASLEAWRERLRAAGVPVSGVVDRFGERSLYFEDPD 119

Query: 122 ANALEFT 128
              LE T
Sbjct: 120 GIRLELT 126

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 28/128 (21%), Positives = 53/128 (41%), Gaps = 15/128 (11%)

Query: 9   VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 68
           +  + HV +   ++E +L+FY  +LG+E+               L  G++ I+L  +   
Sbjct: 1   IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEVGRKA----LRFGSQKINLHPVGGE 56

Query: 69  -DPLSGRPEHGGRDRHTCIAI-RDVSKLKMILDKAGISYTLSKSGR-------PAIFTRD 119
            +P +G P  G      C+     + +L   L+  G+        R        +++ RD
Sbjct: 57  FEPAAGSPGPGS--DDLCLITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRD 114

Query: 120 PDANALEF 127
           PD N +E 
Sbjct: 115 PDGNLIEL 122

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score = 41.7 bits (99), Expect = 1e-05
 Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 10/115 (8%)

Query: 14  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIH-LMELP-NPDPL 71
           H  +  ++LE+SL+FY ++LG+++   +   +  +   +L    E    ++EL  N    
Sbjct: 3   HTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWG-- 60

Query: 72  SGRPEHGGRD-RHTCIAIRDVSKLKMILDKAGISYT----LSKSGRPAIFTRDPD 121
           +  P   G    H   A+ DV      L++ G+  T           A F +DPD
Sbjct: 61  TEEPYDNGNGFGHLAFAVDDVYAACERLEEMGVEVTKPPGDGGMKGIA-FIKDPD 114

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|213772 TIGR03081, metmalonyl_epim, methylmalonyl-CoA epimerase

 Score = 40.8 bits (96), Expect = 2e-05
 Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 2/94 (2%)

Query: 12  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD-P 70
           + HVGI   +LE + +FY+++LG +++E     +   +  ++ +G   + L+E    D P
Sbjct: 2   IDHVGIAVPDLEEAAKFYEDVLGAQVSEIEELPEQGVKVVFIALGNTKVELLEPLGEDSP 61

Query: 71  LSGRPE-HGGRDRHTCIAIRDVSKLKMILDKAGI 103
           ++   E +GG   H  I + D+      L + G+
Sbjct: 62  IAKFLEKNGGGIHHIAIEVDDIEAALETLKEKGV 95

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer. Length = 128

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 40.3 bits (95), Expect = 3e-05
 Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 1/107 (0%)

Query: 13  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 72
           HH+GI+  +L+ +  F+ ++LGL        +      A+  +G      +EL  P    
Sbjct: 1   HHIGIVVPDLDAAAAFWVDLLGLGPWGDYRDEPQNVDLAFARLGDGPAVEVELIQPLDGE 60

Query: 73  GRPE-HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTR 118
              +  G    H    + D+      L+  G+          A   R
Sbjct: 61  SFLDKGGPGLHHIAYWVDDLDAAVARLEAQGVRVAPKGPRAGAAGRR 107

Length = 110

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 36.8 bits (86), Expect = 7e-04
 Identities = 34/121 (28%), Positives = 47/121 (38%), Gaps = 28/121 (23%)

Query: 21  NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG-- 78
           +LERSL FYQ++LGLE+ E           A L  G     L+ L   DP +     G  
Sbjct: 12  DLERSLAFYQDVLGLEVLERTDS------TAVLGTG-GKRPLLVL-EEDPDAPPAPPGTT 63

Query: 79  GRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----------AIFTRDPDANALEF 127
           G   H  I +   + L   L        L + G P           A++  DP+ N +E 
Sbjct: 64  GLY-HFAILLPSRADLARAL------RRLIELGIPLEGASDHLVSEALYLSDPEGNGIEI 116

Query: 128 T 128
            
Sbjct: 117 Y 117

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 36.0 bits (84), Expect = 0.001
 Identities = 10/25 (40%), Positives = 19/25 (76%)

Query: 12 VHHVGILCENLERSLEFYQNILGLE 36
          + H+GI   +LE +L+FY+++LG+ 
Sbjct: 1  IDHIGIAVPDLEAALKFYRDVLGVG 25

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|176668 cd07244, FosA, FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

 Score = 34.3 bits (79), Expect = 0.004
 Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 16/119 (13%)

Query: 11  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 70
            ++H+ +   +LERS+ FY ++LG      + H +   +GA+L  G   + L    N  P
Sbjct: 1   GINHITLAVSDLERSVAFYVDLLGF-----KLHVRWD-KGAYLEAGDLWLCLSVDANVGP 54

Query: 71  LSGRPEHGGRDRHTCIAIR--DVSKLKMILDKAGI-SYTLSKSGRPAIFTRDPDANALE 126
                       H   ++   D + LK  L +AG+  +  + S   + +  DPD + LE
Sbjct: 55  AK-------DYTHYAFSVSEEDFASLKEKLRQAGVKEWKENTSEGDSFYFLDPDGHKLE 106

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 121

>gnl|CDD|176666 cd07242, Glo_EDI_BRP_like_6, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 34.6 bits (80), Expect = 0.004
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 11 SVHHVGILCENLERSLEFYQNILGL 35
           +HHV +   +LERS  FY  +LGL
Sbjct: 1  GIHHVELTVRDLERSRAFYDWLLGL 25

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 128

>gnl|CDD|176705 cd08357, Glo_EDI_BRP_like_18, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 34.5 bits (80), Expect = 0.004
 Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 31/134 (23%)

Query: 13  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-----GAEMI-HLMELP 66
            H+ I   +LE +  FY ++LG    E R  +         WV     G +++ HL   P
Sbjct: 1   FHLAIPVRDLEAARAFYGDVLGC--KEGRSSET--------WVDFDFFGHQLVAHLS--P 48

Query: 67  NPDPLSGRPEHGGRD---RHTCIAIR--DVSKLKMILDKAGISYTLSKS----GRP---- 113
           N +  +      G      H  + +   +   L   L+ AG+ + +       G+P    
Sbjct: 49  NFNADASDNAVDGHPVPVPHFGLILSEEEFDALAERLEAAGVEFLIEPYTRFEGQPGEQE 108

Query: 114 AIFTRDPDANALEF 127
             F +DP  NALEF
Sbjct: 109 TFFLKDPSGNALEF 122

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	132
PRK11478	129	putative lyase; Provisional	99.93
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.93
PLN02367	233	lactoylglutathione lyase	99.92
PLN03042	185	Lactoylglutathione lyase; Provisional	99.92
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.91
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.91
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.91
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.91
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.91
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.91
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.91
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.9
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.9
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.9
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.9
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.9
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.9
PLN02300	286	lactoylglutathione lyase	99.9
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.89
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.89
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.89
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.89
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.89
PRK10291	129	glyoxalase I; Provisional	99.89
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.89
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.89
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.88
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.88
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.88
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.88
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.88
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.88
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.88
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.87
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.87
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.87
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.87
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.87
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.87
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.87
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.87
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.87
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.87
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.86
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.86
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.86
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.86
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.86
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.86
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.85
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.85
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.85
PRK06724	128	hypothetical protein; Provisional	99.85
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.85
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.85
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.85
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.84
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.84
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.83
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.83
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.83
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.83
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.82
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.82
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.82
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.82
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.82
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.82
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.81
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.81
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.81
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.81
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.8
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.8
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.78
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.77
PLN02300	286	lactoylglutathione lyase	99.77
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.74
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.73
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.68
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.67
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.59
COG3607	133	Predicted lactoylglutathione lyase [General functi	99.58
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.48
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.47
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.46
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.46
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	99.41
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	99.36
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	99.32
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	99.26
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.21
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	99.11
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	99.03
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.95
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	98.92
PRK10148	147	hypothetical protein; Provisional	98.87
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.8
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	98.79
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.72
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	98.07
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.05
PF15067	236	FAM124: FAM124 family	97.96
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	97.87
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	97.31
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	96.97
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	96.55
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	96.43
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	95.75
PLN02367	233	lactoylglutathione lyase	95.72
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	95.69
PRK11478	129	putative lyase; Provisional	95.6
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	95.59
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	95.59
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	95.47
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	94.99
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	94.99
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	94.93
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	94.89
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	94.81
PF13670	83	PepSY_2: Peptidase propeptide and YPEB domain This	94.78
PRK10291	129	glyoxalase I; Provisional	94.57
PF06185	185	YecM: YecM protein; InterPro: IPR010393 This famil	94.57
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	94.38
PLN03042	185	Lactoylglutathione lyase; Provisional	94.38
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	94.08
COG3865	151	Uncharacterized protein conserved in bacteria [Fun	93.97
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	93.79
PRK11700	187	hypothetical protein; Provisional	93.7
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	93.58
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	93.56
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	93.3
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	93.09
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	93.02
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	92.83
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	92.72
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	92.53
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	92.52
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	92.49
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	91.77
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	91.03
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	91.03
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	90.99
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	90.9
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	90.79
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	90.01
PF02208	47	Sorb: Sorbin homologous domain; InterPro: IPR00312	89.91
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	89.75
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	89.67
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	89.65
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	89.62
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	89.5
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	89.37
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	88.68
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	88.51
PRK04101	139	fosfomycin resistance protein FosB; Provisional	88.0
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	87.86
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	87.68
cd07268	149	Glo_EDI_BRP_like_4 This conserved domain belongs t	87.52
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	86.28
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	85.85
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	85.61
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	85.31
cd04882	65	ACT_Bt0572_2 C-terminal ACT domain of a novel prot	85.16
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	84.94
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	84.29
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	82.2
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	81.58
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	80.88
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	80.78
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	80.76
PF07063	302	DUF1338: Domain of unknown function (DUF1338); Int	80.7
cd04883	72	ACT_AcuB C-terminal ACT domain of the Bacillus sub	80.24

>PRK11478 putative lyase; Provisional

Probab=99.93  E-value=6.9e-24  Score=126.97  Aligned_cols=122  Identities=23%  Similarity=0.358  Sum_probs=87.2

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEecCCCCCCCCCCCCCCCceEEE
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTC   85 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~   85 (132)
                      +.+.+++||+|.|+|++++.+||+++||+++......+........+.. ++..++++....+...... ....++.|++
T Consensus         2 ~~i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~-~~~~g~~hi~   80 (129)
T PRK11478          2 LGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFPFPPERPSR-PEACGLRHLA   80 (129)
T ss_pred             CCcceecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccceeeEecCCCcEEEEEEecCCCCCCCC-CCCCceeEEE
Confidence            5678999999999999999999999999998653221111111112333 4456777654332221111 1234678999


Q ss_pred             EEECCHHHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEe
Q 032856           86 IAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        86 ~~v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~  129 (132)
                      |.|+|+++++++|+++|+++...    ..+.+.+||.||+||.|||+|
T Consensus        81 f~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         81 FSVDDIDAAVAHLESHNVKCEAIRVDPYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             EEeCCHHHHHHHHHHcCCeeeccccCCCCCCEEEEEECCCCCEEEEEe
Confidence            99999999999999999997642    246788999999999999987

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.93  E-value=5.9e-24  Score=129.31  Aligned_cols=121  Identities=21%  Similarity=0.343  Sum_probs=89.9

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCC-----------CCceeEEEEe--CCeEEEEEecCCCCCCCC--
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----------LPYRGAWLWV--GAEMIHLMELPNPDPLSG--   73 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~-----------~~~~~~~~~~--~~~~~~l~~~~~~~~~~~--   73 (132)
                      +++++||+|.|+|++++.+||++ |||+...+.....           .....+++..  ++..++|+....+.....  
T Consensus         1 ~~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~~~~~~~~~~   79 (142)
T cd08353           1 VSRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFHHPAVIADHR   79 (142)
T ss_pred             CceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEecCCCCcCcCC
Confidence            46899999999999999999998 9998765433111           1123344443  345788887654432211  


Q ss_pred             -CCCCCCCceEEEEEECCHHHHHHHHHhCCCeEEccC----CCccEEEEeCCCCCeEEEEee
Q 032856           74 -RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        74 -~~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~----~~~~~~~~~Dp~G~~iel~~~  130 (132)
                       ....+.+..|+||.|+|+++++++|+++|+++..++    .+.+.+|++||+|+.|||+|.
T Consensus        80 ~~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          80 PAPVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYENSYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCCCeEEEEEECCCCCEEEeeec
Confidence             123346788999999999999999999999986532    467889999999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PLN02367 lactoylglutathione lyase

Probab=99.92  E-value=3.1e-23  Score=133.32  Aligned_cols=123  Identities=15%  Similarity=0.192  Sum_probs=94.6

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeC-------------------CeEEEEEecCCCC
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-------------------AEMIHLMELPNPD   69 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~l~~~~~~~   69 (132)
                      --.+.|+.|.|+|++++++||+++||++...+.+.+..++..+|+..+                   +..++|....+..
T Consensus        73 ~~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e  152 (233)
T PLN02367         73 GYIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTE  152 (233)
T ss_pred             CcEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCC
Confidence            347999999999999999999999999998877766666777777431                   2367776544432


Q ss_pred             C--CCCCCC----CCCCceEEEEEECCHHHHHHHHHhCCCeEEccCC---CccEEEEeCCCCCeEEEEeeC
Q 032856           70 P--LSGRPE----HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        70 ~--~~~~~~----~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~~---~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      .  ....+.    ...+..|+||.|+|+++++++|+++|+++...+.   ..+.+|++|||||.|||+|..
T Consensus       153 ~~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~~riaFIkDPDGn~IEL~e~~  223 (233)
T PLN02367        153 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKMKGIAFIKDPDGYWIEIFDLK  223 (233)
T ss_pred             ccccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCceEEEEEECCCCCEEEEEecc
Confidence            1  111121    1257899999999999999999999999875442   245789999999999999875

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.92  E-value=5.1e-23  Score=129.55  Aligned_cols=125  Identities=17%  Similarity=0.205  Sum_probs=92.5

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-------------------CCeEEEEEecCC
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-------------------GAEMIHLMELPN   67 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~l~~~~~   67 (132)
                      ..-.++.|+.|.|.|+++|++||+++|||+...+...+...+..+++..                   ++..++|+....
T Consensus        23 ~~~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~  102 (185)
T PLN03042         23 TKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWG  102 (185)
T ss_pred             CCCcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCC
Confidence            3456899999999999999999999999999877554454455555542                   234677776443


Q ss_pred             CCCCC--C----CCCCCCCceEEEEEECCHHHHHHHHHhCCCeEEccCC---CccEEEEeCCCCCeEEEEeeC
Q 032856           68 PDPLS--G----RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        68 ~~~~~--~----~~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~~---~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      ....+  .    ......++.|++|.|+|+++++++|+++|+++...+.   +.+.+|++||||+.|||++..
T Consensus       103 ~~~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~~~~~~fi~DPdG~~IEl~e~~  175 (185)
T PLN03042        103 TESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDLK  175 (185)
T ss_pred             CcccccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCCceeEEEEECCCCCEEEEEECC
Confidence            22110  0    1112257899999999999999999999999875432   345678899999999999865

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.91  E-value=7.8e-23  Score=127.00  Aligned_cols=122  Identities=22%  Similarity=0.264  Sum_probs=88.7

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccC----CC--------------CCCCceeEEEEeCC-eEEEEEecCCCCC
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEAR----PH--------------DKLPYRGAWLWVGA-EMIHLMELPNPDP   70 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~----~~--------------~~~~~~~~~~~~~~-~~~~l~~~~~~~~   70 (132)
                      .+++||+|.|+|+++|++||+++||++...+.    +.              .......+++..++ ..++++....+..
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~~~~   82 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKNQEN   82 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccCCCC
Confidence            57999999999999999999999999875321    10              01113455566543 4688888765433


Q ss_pred             CCCCC-CCCCCceEEEEEECCHHHHHHHHHhCCCeEEccC-----C---CccEEEEeCCCCCeEEEEeeC
Q 032856           71 LSGRP-EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK-----S---GRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        71 ~~~~~-~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~-----~---~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      +.... ..+.+..|+||.|+|+++++++|+++|++....+     .   +.+.+|++|||||.|||++.+
T Consensus        83 ~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  152 (162)
T TIGR03645        83 PEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHS  152 (162)
T ss_pred             CCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcC
Confidence            22221 1246789999999999999999999998653221     1   237899999999999999875

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.91  E-value=8e-23  Score=121.33  Aligned_cols=120  Identities=26%  Similarity=0.415  Sum_probs=86.2

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA   87 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   87 (132)
                      +.+++||+|.|.|++++++||+++||++................+.. ++..++++........... ....+..|++|.
T Consensus         1 ~~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~-~~~~g~~h~~~~   79 (125)
T cd08352           1 LFGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFSFPNPPERPSY-PEACGLRHLAFS   79 (125)
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEEcCCCCCCCCC-CcCCCceEEEEE
Confidence            36899999999999999999999999998764322221111122333 4456666654433221111 123567899999


Q ss_pred             ECCHHHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEe
Q 032856           88 IRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        88 v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~  129 (132)
                      |+|+++++++++++|+++...    ..+.+.+|++||+||.|||+|
T Consensus        80 v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          80 VEDIEAAVKHLKAKGVEVEPIRVDEFTGKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             eCCHHHHHHHHHHcCCccccccccCCCceEEEEEECCCCCEEEecC
Confidence            999999999999999987643    235678999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.91  E-value=7.6e-23  Score=121.56  Aligned_cols=117  Identities=23%  Similarity=0.318  Sum_probs=84.2

Q ss_pred             eeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeC-CeEEEEEecCCCCCCCCCCCCCCCceEEEEEEC
Q 032856           11 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR   89 (132)
Q Consensus        11 ~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~   89 (132)
                      +++||+|.|+|++++++||+++||+++......+..+....|+..+ +..++++......... ......+..|+||.|+
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~g~~hi~f~v~   79 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMTRPDIAPSP-NEGERTGWAHLAFSVG   79 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEcCcccCCCc-ccCCCCceEEEEEECC
Confidence            4789999999999999999999999976543222333345666664 4567777543222111 1123356789999996


Q ss_pred             ---CHHHHHHHHHhCCCeEEccC----CCccEEEEeCCCCCeEEEE
Q 032856           90 ---DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFT  128 (132)
Q Consensus        90 ---d~~~~~~~l~~~g~~~~~~~----~~~~~~~~~Dp~G~~iel~  128 (132)
                         ++++++++|+++|+++...+    .+.+.++++|||||.|||.
T Consensus        80 ~~~~v~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          80 SKEAVDELTERLRADGYLIIGEPRTTGDGYYESVILDPEGNRIEIT  125 (125)
T ss_pred             CHHHHHHHHHHHHHCCCEEEeCceecCCCeEEEEEECCCCCEEEeC
Confidence               58899999999999886533    3445678999999999983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.91  E-value=6.8e-23  Score=123.93  Aligned_cols=119  Identities=13%  Similarity=0.058  Sum_probs=87.6

Q ss_pred             eeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCC--CCCCCCCceEEEEEEC
Q 032856           12 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAIR   89 (132)
Q Consensus        12 ~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~hi~~~v~   89 (132)
                      ++|++|.|+|++++++||+++|||+.......+  .....++..++..+.+...........  ....+.+..|++|.|+
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~--~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia~~V~   78 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSE--DKASYLLRQGDINFVLNSPLNSFAPVADFLEKHGDGVCDVAFRVD   78 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCC--ceEEEEEEcCCEEEEEecCCCCCCchHHHHHhcCCceEEEEEEeC
Confidence            589999999999999999999999988754422  123344555555565554332221101  0123456789999999


Q ss_pred             CHHHHHHHHHhCCCeEEccC----CCccEEEEeCCCCCeEEEEeeCC
Q 032856           90 DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVDG  132 (132)
Q Consensus        90 d~~~~~~~l~~~g~~~~~~~----~~~~~~~~~Dp~G~~iel~~~~~  132 (132)
                      |+++++++|+++|+++...+    .+.+.++++||+|+.|||++.++
T Consensus        79 Dvda~~~~l~~~G~~v~~~p~~~~~~~~~~~i~dp~G~~ie~~~~~~  125 (136)
T cd08342          79 DAAAAYERAVARGAKPVQEPVEEPGELKIAAIKGYGDSLHTLVDRKG  125 (136)
T ss_pred             CHHHHHHHHHHcCCeEccCceecCCeEEEEEEeccCCcEEEEEecCC
Confidence            99999999999999986433    45689999999999999999753

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.91  E-value=9.2e-23  Score=125.26  Aligned_cols=124  Identities=23%  Similarity=0.306  Sum_probs=85.7

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCe-EEEEEecCCCCCCCCCCCCCCCceEEE
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTC   85 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~hi~   85 (132)
                      ...++++||.|.|+|++++++||+++|||+.......+......+++..++. ....+........ .....+.++.|++
T Consensus        13 ~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~g~~hi~   91 (150)
T TIGR00068        13 TKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGT-EKYDLGNGFGHIA   91 (150)
T ss_pred             cCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCC-CcccCCCceeEEE
Confidence            4578999999999999999999999999998765433332233445544322 1111111111000 1112234678999


Q ss_pred             EEECCHHHHHHHHHhCCCeEEccC-----CCccEEEEeCCCCCeEEEEeeC
Q 032856           86 IAIRDVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        86 ~~v~d~~~~~~~l~~~g~~~~~~~-----~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      |.|+|+++++++|.++|+++...+     .+.+.+||+||+||.|||++..
T Consensus        92 f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  142 (150)
T TIGR00068        92 IGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRK  142 (150)
T ss_pred             EecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECC
Confidence            999999999999999999875433     2346789999999999999864

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.91  E-value=1e-22  Score=124.11  Aligned_cols=113  Identities=16%  Similarity=0.231  Sum_probs=81.5

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCC-ceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   86 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   86 (132)
                      .+++++||+|.|+|++++.+||+++|||++..+...+... ...+|+..+... +.......        ..+++.|+||
T Consensus         3 ~~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~~-h~~~~~~~--------~~~~~~Hiaf   73 (143)
T cd07243           3 GAHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNKP-HDIAFVGG--------PDGKLHHFSF   73 (143)
T ss_pred             CCceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCCc-ceEEEecC--------CCCCceEEEE
Confidence            4679999999999999999999999999976653222211 134566554332 22222111        1256889999


Q ss_pred             EECCHHH---HHHHHHhCCCeEEccC-----CCccEEEEeCCCCCeEEEEe
Q 032856           87 AIRDVSK---LKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        87 ~v~d~~~---~~~~l~~~g~~~~~~~-----~~~~~~~~~Dp~G~~iel~~  129 (132)
                      .|+|+++   +.++|+++|+++..++     .+.+++||.|||||.|||++
T Consensus        74 ~v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~  124 (143)
T cd07243          74 FLESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFA  124 (143)
T ss_pred             EcCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEec
Confidence            9999888   5689999999876433     23578999999999999975

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.91  E-value=1.8e-22  Score=122.46  Aligned_cols=113  Identities=23%  Similarity=0.361  Sum_probs=87.3

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA   87 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   87 (132)
                      |+.+++|+.|.|+|++++++||+++||+++..+..      ..+++..++..+.+.......    ......+..|++|.
T Consensus         1 ~i~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~g~~l~l~~~~~~~----~~~~~~~~~hiaf~   70 (139)
T PRK04101          1 MLKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLNGLWIALNEEKDIP----RNEIHQSYTHIAFS   70 (139)
T ss_pred             CCCcEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecCCeEEEeeccCCCC----CccCCCCeeEEEEE
Confidence            56789999999999999999999999999876422      346677777666554321111    11123456899999


Q ss_pred             EC--CHHHHHHHHHhCCCeEEccC----CCccEEEEeCCCCCeEEEEee
Q 032856           88 IR--DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        88 v~--d~~~~~~~l~~~g~~~~~~~----~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      ++  |+++++++++++|+++...+    .+.+++||+|||||.|||.+.
T Consensus        71 v~~~dv~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~  119 (139)
T PRK04101         71 IEEEDFDHWYQRLKENDVNILPGRERDERDKKSIYFTDPDGHKFEFHTG  119 (139)
T ss_pred             ecHHHHHHHHHHHHHCCceEcCCccccCCCceEEEEECCCCCEEEEEeC
Confidence            98  99999999999999875432    367999999999999999864

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.90  E-value=2.1e-22  Score=121.06  Aligned_cols=115  Identities=17%  Similarity=0.277  Sum_probs=83.9

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCC-ceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   86 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   86 (132)
                      |+.+++||+|.|+|++++++||+++||++...+....... ....++..++..+.+.....+        ...++.|++|
T Consensus         1 mi~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~--------~~~~~~Hiaf   72 (131)
T cd08364           1 MIEGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIGGLWIAIMEGDSL--------QERTYNHIAF   72 (131)
T ss_pred             CcccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcCCeEEEEecCCCC--------CCCCceEEEE
Confidence            4678999999999999999999999999876543321110 111233445555555432111        1135789999


Q ss_pred             EEC--CHHHHHHHHHhCCCeEEccC----CCccEEEEeCCCCCeEEEEee
Q 032856           87 AIR--DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        87 ~v~--d~~~~~~~l~~~g~~~~~~~----~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      .|+  +++++.++|+++|+++....    ..++++||+|||||.|||.+.
T Consensus        73 ~v~~~~ld~~~~~l~~~gv~~~~~~~~~~~~g~~~yf~DPdG~~iEl~~~  122 (131)
T cd08364          73 KISDSDVDEYTERIKALGVEMKPPRPRVQGEGRSIYFYDFDNHLFELHTG  122 (131)
T ss_pred             EcCHHHHHHHHHHHHHCCCEEecCCccccCCceEEEEECCCCCEEEEecC
Confidence            998  79999999999999876532    246899999999999999864

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.90  E-value=5.2e-22  Score=117.47  Aligned_cols=114  Identities=21%  Similarity=0.315  Sum_probs=84.4

Q ss_pred             eeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCC----eEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 032856           12 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCIA   87 (132)
Q Consensus        12 ~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   87 (132)
                      +.|++|.|+|++++.+||+++||+++.............+++..++    ..+++........   ....+.+..|++|.
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~i~~~   77 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEE---PYDNGNGFGHLAFA   77 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCC---CcCCCCCeEEEEEE
Confidence            5799999999999999999999999877544333234456666643    3455544322211   11223467899999


Q ss_pred             ECCHHHHHHHHHhCCCeEEccC---CCccEEEEeCCCCCeEEEE
Q 032856           88 IRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFT  128 (132)
Q Consensus        88 v~d~~~~~~~l~~~g~~~~~~~---~~~~~~~~~Dp~G~~iel~  128 (132)
                      |+|+++++++++++|+++...+   .+.+.+||+||+||++||+
T Consensus        78 v~did~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          78 VDDVYAACERLEEMGVEVTKPPGDGGMKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             eCCHHHHHHHHHHCCCEEeeCCccCCCceEEEEECCCCCEEEeC
Confidence            9999999999999999987654   3567889999999999984

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.90  E-value=8.3e-22  Score=117.45  Aligned_cols=110  Identities=18%  Similarity=0.269  Sum_probs=83.3

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEE
Q 032856            6 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC   85 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~   85 (132)
                      +.++.++.||.|.|+|++++.+||+++|||++..+..      ..+|+..++....+......          .+..|++
T Consensus         1 ~~~~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~i~l~~~~----------~~~~~ia   64 (124)
T cd08361           1 MIELQDIAYVRLGTRDLAGATRFATDILGLQVAERTA------KATYFRSDARDHTLVYIEGD----------PAEQASG   64 (124)
T ss_pred             CceEEEeeEEEEeeCCHHHHHHHHHhccCceeccCCC------CeEEEEcCCccEEEEEEeCC----------CceEEEE
Confidence            3578999999999999999999999999999875432      24667765433333322111          2347899


Q ss_pred             EEECC---HHHHHHHHHhCCCeEEccC-------CCccEEEEeCCCCCeEEEEeeC
Q 032856           86 IAIRD---VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        86 ~~v~d---~~~~~~~l~~~g~~~~~~~-------~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      |+|+|   +++++++++++|+++..++       .+.+.+||+|||||.||++..+
T Consensus        65 f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          65 FELRDDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             EEECCHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence            99985   9999999999999876532       3356789999999999998764

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.90  E-value=8.9e-22  Score=116.82  Aligned_cols=117  Identities=21%  Similarity=0.373  Sum_probs=87.4

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   88 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   88 (132)
                      +.+++|+.|.|+|++++++||+++||++.....+..    ...++..++..+++......... .......+..|++|.+
T Consensus         1 ~~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~hi~~~~   75 (125)
T cd07253           1 IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV----GRKALRFGSQKINLHPVGGEFEP-AAGSPGPGSDDLCLIT   75 (125)
T ss_pred             CcccceEEEEecCHHHHHHHHHHHhCceeecccccC----CceEEEeCCEEEEEecCCCccCc-CccCCCCCCceEEEEe
Confidence            468999999999999999999999999988754321    23456666666666554332211 1222345678999999


Q ss_pred             CC-HHHHHHHHHhCCCeEEccC-------CCccEEEEeCCCCCeEEEEee
Q 032856           89 RD-VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        89 ~d-~~~~~~~l~~~g~~~~~~~-------~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      ++ +++++++|+++|+++...+       .+++.+||.||+||.||+.++
T Consensus        76 ~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  125 (125)
T cd07253          76 EPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSNY  125 (125)
T ss_pred             cccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeeeC
Confidence            84 9999999999999875432       235789999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.90  E-value=4e-22  Score=116.27  Aligned_cols=110  Identities=40%  Similarity=0.745  Sum_probs=85.0

Q ss_pred             eeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCe-EEEEEecCCCCCCCCCCCCCCCceEEEEEECC
Q 032856           12 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD   90 (132)
Q Consensus        12 ~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d   90 (132)
                      ++|++|.|+|++++++||+++||++........   ...+|+..++. .+++.........   +....+..|++|.|+|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~i~l~~~~~~~~~---~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL---FPGAWLYAGDGPQLHLIEEDPPDAL---PEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCC---CCceEEEeCCCcEEEEEecCCCccc---cCCCcccceEEEEeCC
Confidence            589999999999999999999999987654322   23466777655 6777655443221   2233557899999999


Q ss_pred             HHHHHHHHHhCCCeEEccC---CCccEEEEeCCCCCeEEE
Q 032856           91 VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEF  127 (132)
Q Consensus        91 ~~~~~~~l~~~g~~~~~~~---~~~~~~~~~Dp~G~~iel  127 (132)
                      +++++++++++|+++...+   .+.+++++.||+||.+||
T Consensus        75 ~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          75 LDAFRARLKAAGVPYTESDVPGDGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHHHHcCCCcccccCCCCCccEEEEECCCCCEEeC
Confidence            9999999999999986543   466889999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.90  E-value=2.1e-22  Score=120.21  Aligned_cols=119  Identities=20%  Similarity=0.414  Sum_probs=86.6

Q ss_pred             eeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCC--CCCCCCceEEEEEE
Q 032856           11 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR--PEHGGRDRHTCIAI   88 (132)
Q Consensus        11 ~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~hi~~~v   88 (132)
                      +++|++|.|+|++++++||+++||++..............+++..++..++|............  .....+..|+||.|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i~~~v   80 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGNTKVELLEPLGEDSPIAKFLEKNGGGIHHIAIEV   80 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCCEEEEEEecCCCCChHHHHHhcCCCceEEEEEEc
Confidence            5799999999999999999999999987643322334456667777777787654222211100  11235678999999


Q ss_pred             CCHHHHHHHHHhCCCeEEcc-C----CCccEEEE--eCCCCCeEEEEe
Q 032856           89 RDVSKLKMILDKAGISYTLS-K----SGRPAIFT--RDPDANALEFTQ  129 (132)
Q Consensus        89 ~d~~~~~~~l~~~g~~~~~~-~----~~~~~~~~--~Dp~G~~iel~~  129 (132)
                      +|+++++++|+++|+++... +    .+.+.+|+  +||||+.||+.|
T Consensus        81 ~di~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        81 DDIEAALETLKEKGVRLIDEEPRIGAGGKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             CCHHHHHHHHHHCCCcccCCCCccCCCCCEEEEecccccCcEEEEecC
Confidence            99999999999999987642 2    23455566  799999999975

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>PLN02300 lactoylglutathione lyase

Probab=99.90  E-value=4.9e-22  Score=133.52  Aligned_cols=121  Identities=25%  Similarity=0.325  Sum_probs=88.7

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCe----EEEEEecCCCCCCCCCCCCCCCce
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDR   82 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~   82 (132)
                      +.+.+++|++|.|+|++++++||+++|||+...+...+......+|+..++.    .+.+......    .....+.+..
T Consensus        20 ~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~----~~~~~~~g~~   95 (286)
T PLN02300         20 KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGV----DKYDIGTGFG   95 (286)
T ss_pred             cccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccCCC----CccccCCCcc
Confidence            5689999999999999999999999999998765433333344566665432    2233221111    1122345678


Q ss_pred             EEEEEECCHHHHHHHHHhCCCeEEccC----C-CccEEEEeCCCCCeEEEEeeC
Q 032856           83 HTCIAIRDVSKLKMILDKAGISYTLSK----S-GRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        83 hi~~~v~d~~~~~~~l~~~g~~~~~~~----~-~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      |++|.|+|+++++++++++|+++...+    . +.+.+||+||+||.|||++..
T Consensus        96 hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~  149 (286)
T PLN02300         96 HFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRG  149 (286)
T ss_pred             EEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCC
Confidence            999999999999999999999876432    2 345789999999999999874

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.89  E-value=6.8e-22  Score=122.13  Aligned_cols=113  Identities=17%  Similarity=0.235  Sum_probs=83.9

Q ss_pred             eeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeC---CeEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 032856           11 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG---AEMIHLMELPNPDPLSGRPEHGGRDRHTCIA   87 (132)
Q Consensus        11 ~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   87 (132)
                      +++||+|.|+|++++++||+++|||++.....     ....++..+   +..+.++......   ......+++.|++|.
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~-----~~~~~~~~~~~~~~~l~l~~~~~~~---~~~~~~~~l~Hiaf~   72 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG-----DRVRLEEGGGGPGAVVDVLEEPDQP---RGRPGAGTVHHVAFR   72 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC-----CEEEEEecCCCCCCEEEEEeCCCCC---CCcccCCceEEEEEE
Confidence            57999999999999999999999999876543     133344433   4466666542211   111223567899999


Q ss_pred             ECC---HHHHHHHHHhCCCeEEccC--CCccEEEEeCCCCCeEEEEeeC
Q 032856           88 IRD---VSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        88 v~d---~~~~~~~l~~~g~~~~~~~--~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      |+|   +++++++|+++|+.+....  ...+++||+||+||.|||.+..
T Consensus        73 v~d~~dvd~~~~~L~~~Gv~~~~~~~~~~~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          73 VPDDEELEAWKERLEALGLPVSGIVDRFYFKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             CCCHHHHHHHHHHHHHCCCCcccccccccEEEEEEECCCCcEEEEEECC
Confidence            998   8999999999999764432  3457899999999999999864

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.89  E-value=1.3e-21  Score=114.82  Aligned_cols=107  Identities=15%  Similarity=0.169  Sum_probs=80.7

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   88 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   88 (132)
                      +++++|+.|.|+|+++|++||++ |||+...+..      ..+|+..++....+.......        ..++.|++|.|
T Consensus         1 ~~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~af~v   65 (113)
T cd07267           1 LTDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD------DELYYRGYGTDPFVYVARKGE--------KARFVGAAFEA   65 (113)
T ss_pred             CcEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC------CeEEEecCCCccEEEEcccCC--------cCcccEEEEEE
Confidence            47899999999999999999999 9998865422      235666543322332221111        14578999999


Q ss_pred             CCHHHHHHHHHhCCCeEEcc---CCCccEEEEeCCCCCeEEEEee
Q 032856           89 RDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        89 ~d~~~~~~~l~~~g~~~~~~---~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      +|.+++.+.++++|......   +.+.+.+||.||+||.|||+..
T Consensus        66 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          66 ASRADLEKAAALPGASVIDDLEAPGGGKRVTLTDPDGFPVELVYG  110 (113)
T ss_pred             CCHHHHHHHHHcCCCeeecCCCCCCCceEEEEECCCCCEEEEEec
Confidence            99999999999999976543   4567899999999999999753

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.89  E-value=7.5e-22  Score=118.68  Aligned_cols=110  Identities=23%  Similarity=0.399  Sum_probs=84.2

Q ss_pred             eeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEEC--
Q 032856           12 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--   89 (132)
Q Consensus        12 ~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~--   89 (132)
                      |+||.|.|+|++++++||+++||+++....+      ..+++..++..+.+.......    .....+++.|++|.++  
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~----~~~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE------KTAYFTIGGTWLALNEEPDIP----RNEIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC------ccceEeeCceEEEEEccCCCC----cCCcCccceEEEEEecHH
Confidence            5899999999999999999999999875422      234566776666654432211    1122356789999998  


Q ss_pred             CHHHHHHHHHhCCCeEEccC----CCccEEEEeCCCCCeEEEEeeC
Q 032856           90 DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        90 d~~~~~~~l~~~g~~~~~~~----~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      |+++++++|+++|+++..++    .+++.+||.|||||.|||.+.+
T Consensus        71 dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~f~DPdG~~iEl~~~~  116 (131)
T cd08363          71 EFDAFYTRLKEAGVNILPGRKRDVRDRKSIYFTDPDGHKLEVHTGT  116 (131)
T ss_pred             HHHHHHHHHHHcCCcccCCCccccCcceEEEEECCCCCEEEEecCc
Confidence            49999999999999876432    3678999999999999998764

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.89  E-value=1.2e-21  Score=122.12  Aligned_cols=118  Identities=21%  Similarity=0.352  Sum_probs=83.9

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   86 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   86 (132)
                      +.+.+++|++|.|+|++++++||+++|||++.............+|+...+....+.......      ...+++.|+||
T Consensus         2 ~~i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~------~~~~~~~hiaf   75 (166)
T cd09014           2 VGVRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNKVHDVAYTRDPA------GARGRLHHLAY   75 (166)
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCCceeEEEecCCC------CCCCCceEEEE
Confidence            568899999999999999999999999999876533222222346666644333332222111      11245789999


Q ss_pred             EECCHH---HHHHHHHhCCCeEEccC-----CCccEEEEeCCCCCeEEEEee
Q 032856           87 AIRDVS---KLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        87 ~v~d~~---~~~~~l~~~g~~~~~~~-----~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      .|+|.+   +++++|+++|+++...+     .....+|++||+||.|||.+.
T Consensus        76 ~v~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          76 ALDTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             ECCCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence            998555   77899999999875332     233468999999999999886

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.89  E-value=1.7e-21  Score=115.48  Aligned_cols=108  Identities=18%  Similarity=0.213  Sum_probs=81.6

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEEC
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR   89 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~   89 (132)
                      +++.||+|.|+|+++|++||+++|||++..+...     ..+|+..++..+.+.....+         ..+..|++|.++
T Consensus         1 ~~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~f~v~   66 (120)
T cd07252           1 KSLGYLGVESSDLDAWRRFATDVLGLQVGDRPED-----GALYLRMDDRAWRIAVHPGE---------ADDLAYAGWEVA   66 (120)
T ss_pred             CcccEEEEEeCCHHHHHHHHHhccCceeccCCCC-----CeEEEEccCCceEEEEEeCC---------CCceeEEEEEEC
Confidence            3689999999999999999999999998654221     34666665544444432221         135679999997


Q ss_pred             ---CHHHHHHHHHhCCCeEEccC-------CCccEEEEeCCCCCeEEEEeeC
Q 032856           90 ---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        90 ---d~~~~~~~l~~~g~~~~~~~-------~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                         |+++++++|+++|+++...+       .+.+.+||+|||||.|||+..+
T Consensus        67 ~~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          67 DEAALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             CHHHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence               58888999999999987432       3357899999999999998754

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>PRK10291 glyoxalase I; Provisional

Probab=99.89  E-value=7.1e-22  Score=118.41  Aligned_cols=112  Identities=22%  Similarity=0.359  Sum_probs=79.9

Q ss_pred             EEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCe----EEEEEecCCCCCCCCCCCCCCCceEEEEEECCH
Q 032856           16 GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV   91 (132)
Q Consensus        16 ~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~   91 (132)
                      .|.|+|++++++||+++|||+.......+......+++..++.    .+++...  ..  ......+.+..|+||.|+|+
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~--~~~~~~g~~~~hlaf~V~d~   76 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYN--WG--VDKYELGTAYGHIALSVDNA   76 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeec--CC--CCCCcCCCCeeEEEEEeCCH
Confidence            3789999999999999999998765544444456666655432    2333211  11  11222345678999999999


Q ss_pred             HHHHHHHHhCCCeEEccC----CC-ccEEEEeCCCCCeEEEEeeC
Q 032856           92 SKLKMILDKAGISYTLSK----SG-RPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        92 ~~~~~~l~~~g~~~~~~~----~~-~~~~~~~Dp~G~~iel~~~~  131 (132)
                      ++++++|+++|+++...+    .+ .+.+|+.|||||.|||++..
T Consensus        77 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~  121 (129)
T PRK10291         77 AEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEK  121 (129)
T ss_pred             HHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEcc
Confidence            999999999999876432    23 35678899999999999864

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.89  E-value=4e-21  Score=114.36  Aligned_cols=113  Identities=28%  Similarity=0.369  Sum_probs=83.9

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIA   87 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   87 (132)
                      ++++||+|.|+|++++++||+++|||++....+      ..+++..++.  .+.+......  . .......+..|++|.
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~l~~~~~~~~l~l~~~~~~--~-~~~~~~~~~~hi~f~   71 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGGKRPLLVLEEDPDA--P-PAPPGATGLYHFAIL   71 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcCC------CEEEEecCCCeEEEEEEeCCCC--C-cccCCCCcEEEEEEE
Confidence            579999999999999999999999999987632      3456666552  3444333221  1 122233567899999


Q ss_pred             EC---CHHHHHHHHHhCCCeEEccC--CCccEEEEeCCCCCeEEEEeeC
Q 032856           88 IR---DVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        88 v~---d~~~~~~~l~~~g~~~~~~~--~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      |+   ++++++++++++|+++....  ...+++|+.||+||.+||.+..
T Consensus        72 v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~~~~DPdG~~iEi~~~~  120 (125)
T cd07255          72 LPSRADLAAALRRLIELGIPLVGASDHLVSEALYLSDPEGNGIEIYADR  120 (125)
T ss_pred             CCCHHHHHHHHHHHHHcCCceeccccccceeEEEEECCCCCEEEEEEec
Confidence            97   58889999999999875432  2347899999999999998754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.89  E-value=4.9e-22  Score=122.37  Aligned_cols=112  Identities=14%  Similarity=0.150  Sum_probs=80.6

Q ss_pred             eeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCC-CCCceeEEEEeCCe--EEEE--EecCCCCCCCCCCCCCCCceEEE
Q 032856           11 SVHHVGILCENLERSLEFYQNILGLEINEARPHD-KLPYRGAWLWVGAE--MIHL--MELPNPDPLSGRPEHGGRDRHTC   85 (132)
Q Consensus        11 ~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~--~~~l--~~~~~~~~~~~~~~~~~~~~hi~   85 (132)
                      +++||+|.|+|+++|++||+++||+++......+ ......+|+..++.  ....  +....        ...+++.|+|
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~--------~~~~g~~Hia   72 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALAQ--------GPESGVHHAA   72 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHhc--------CCCCceeEEE
Confidence            5799999999999999999999999987643322 12235677766431  1100  00000        1136789999


Q ss_pred             EEECCHHHHH---HHHHhCCCeEEccC-----CCccEEEEeCCCCCeEEEEee
Q 032856           86 IAIRDVSKLK---MILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        86 ~~v~d~~~~~---~~l~~~g~~~~~~~-----~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      |.|+|++++.   ++|+++|+++..++     .....+|++||+||.|||+..
T Consensus        73 f~v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~  125 (153)
T cd07257          73 FEVHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTD  125 (153)
T ss_pred             EEcCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcC
Confidence            9999999986   99999999987543     123467999999999999864

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.88  E-value=3.3e-21  Score=114.40  Aligned_cols=109  Identities=16%  Similarity=0.200  Sum_probs=80.2

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CC-eEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA-EMIHLMELPNPDPLSGRPEHGGRDRHTCI   86 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~-~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   86 (132)
                      +++++|++|.|+|++++++||+++|||+.....+.     ..+++.. ++ ....+.....         ...+..|++|
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~---------~~~~~~hiaf   67 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDDQ-----GRVYLKAWDEFDHHSIVLREA---------DTAGLDFMGF   67 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecCC-----ceEEEEccCCCcccEEEeccC---------CCCCeeEEEE
Confidence            67999999999999999999999999998764321     1244544 21 1222222111         1245789999


Q ss_pred             EEC---CHHHHHHHHHhCCCeEEccC-----CCccEEEEeCCCCCeEEEEeeC
Q 032856           87 AIR---DVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        87 ~v~---d~~~~~~~l~~~g~~~~~~~-----~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      .|+   |+++++++|+++|+++...+     ..++.+||+|||||.|||++..
T Consensus        68 ~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          68 KVLDDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             EeCCHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEec
Confidence            997   88899999999999876432     2357899999999999998753

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.88  E-value=2.7e-21  Score=114.63  Aligned_cols=110  Identities=20%  Similarity=0.287  Sum_probs=81.7

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCC-eEEEEEecCCCCCCCCCCCCCCCceEEE
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTC   85 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~hi~   85 (132)
                      +.+.+++|+.|.|+|++++++||+++||+++..+.+      ..+|+...+ ...+.+.....        ...++.|++
T Consensus         2 ~~i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~~~~~l~~~--------~~~~~~h~a   67 (121)
T cd09013           2 FDIAHLAHVELLTPKPEESLWFFTDVLGLEETGREG------QSVYLRAWGDYEHHSLKLTES--------PEAGLGHIA   67 (121)
T ss_pred             CCccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC------CeEEEEeccCCCccEEEEeeC--------CCCceEEEE
Confidence            467899999999999999999999999999887533      245665532 11111111111        114678999


Q ss_pred             EEEC---CHHHHHHHHHhCCCeEEc---cCCCccEEEEeCCCCCeEEEEee
Q 032856           86 IAIR---DVSKLKMILDKAGISYTL---SKSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        86 ~~v~---d~~~~~~~l~~~g~~~~~---~~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      |.|+   +++++.++++++|+++..   .+..+.++||+|||||.+|++..
T Consensus        68 f~v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  118 (121)
T cd09013          68 WRASSPEALERRVAALEASGLGIGWIEGDPGHGKAYRFRSPDGHPMELYWE  118 (121)
T ss_pred             EEcCCHHHHHHHHHHHHHcCCccccccCCCCCcceEEEECCCCCEEEEEEe
Confidence            9997   677889999999998743   23457789999999999999864

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.88  E-value=4.3e-21  Score=114.15  Aligned_cols=107  Identities=21%  Similarity=0.300  Sum_probs=80.4

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCC-eEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIA   87 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   87 (132)
                      -++++|+.|.|+|+++|++||+++||++......      ..+++..++ ..+.+...  ..        .....|++|.
T Consensus         2 ~~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~l~~~~~--~~--------~~~~~h~a~~   65 (123)
T cd08351           2 TVTLNHTIVPARDREASAEFYAEILGLPWAKPFG------PFAVVKLDNGVSLDFAQP--DG--------EIPPQHYAFL   65 (123)
T ss_pred             cceEeEEEEEcCCHHHHHHHHHHhcCCEeeeccC------CEEEEEcCCCcEEEEecC--CC--------CCCcceEEEE
Confidence            3689999999999999999999999999876321      123344433 34444332  10        1335799999


Q ss_pred             EC--CHHHHHHHHHhCCCeEEcc-----------CCCccEEEEeCCCCCeEEEEeeC
Q 032856           88 IR--DVSKLKMILDKAGISYTLS-----------KSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        88 v~--d~~~~~~~l~~~g~~~~~~-----------~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      ++  |+++++++|+++|+++...           ..+.+.+||+|||||.|||++.+
T Consensus        66 v~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  122 (123)
T cd08351          66 VSEEEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITRP  122 (123)
T ss_pred             eCHHHHHHHHHHHHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEecc
Confidence            97  6999999999999987432           24679999999999999999875

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.88  E-value=6.6e-21  Score=113.88  Aligned_cols=113  Identities=26%  Similarity=0.354  Sum_probs=85.3

Q ss_pred             eeeeEEEEeCCHHHHHHHHHhhc---CCeeeccCCCCCCCceeEEEEe-CCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 032856           11 SVHHVGILCENLERSLEFYQNIL---GLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   86 (132)
Q Consensus        11 ~~~hv~i~v~d~~~~~~fy~~~l---g~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   86 (132)
                      +++||.|.|+|++++++||+++|   ||+.....+.     ...|... ++..+.++........ .......++.|++|
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~~-----~~~~~~~~~~~~i~l~~~~~~~~~-~~~~~~~g~~hia~   74 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWED-----GRSWRAGDGGTYLVLQQADGESAG-RHDRRNPGLHHLAF   74 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeecc-----CceEEecCCceEEEEEecccCCCc-ccccCCcCeeEEEE
Confidence            57999999999999999999999   9998775421     2234443 5567777765543322 11223456789999


Q ss_pred             EEC---CHHHHHHHHHhCCCeEEccC-------CCccEEEEeCCCCCeEEEEe
Q 032856           87 AIR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        87 ~v~---d~~~~~~~l~~~g~~~~~~~-------~~~~~~~~~Dp~G~~iel~~  129 (132)
                      .|+   |+++++++|+++|+++...+       .+.+.+|++||+||.+||+.
T Consensus        75 ~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~  127 (128)
T cd07242          75 RAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVA  127 (128)
T ss_pred             EcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEe
Confidence            997   58899999999999986532       25689999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.88  E-value=6.3e-21  Score=112.16  Aligned_cols=113  Identities=21%  Similarity=0.304  Sum_probs=80.8

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCC---eEEEEEecCCCCCCCCCCCCCCCceEEEEEECC
Q 032856           14 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA---EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD   90 (132)
Q Consensus        14 hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d   90 (132)
                      ||+|.|.|++++++||+++||+++........ ....+.+..++   ..+++........  ......++..|++|.|+|
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~v~d   77 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPGSPETSLVLAPPANPAA--MSGLQPGGTPGLVLATDD   77 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCCCCeeEEEEeCCCCccc--cccccCCCceEEEEEehH
Confidence            89999999999999999999999987644211 22223333322   2344433222211  112234567799999999


Q ss_pred             HHHHHHHHHhCCCeEEccC---CCccEEEEeCCCCCeEEEEe
Q 032856           91 VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        91 ~~~~~~~l~~~g~~~~~~~---~~~~~~~~~Dp~G~~iel~~  129 (132)
                      +++++++++++|+++...+   .+++.+|++||+||.|||+|
T Consensus        78 i~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          78 IDATYEELKARGVEFSEEPREMPYGTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHHHHhCCCEEeeccccCCCceEEEEECCCCCEEEEeC
Confidence            9999999999999887543   35689999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.88  E-value=2.7e-21  Score=119.18  Aligned_cols=115  Identities=17%  Similarity=0.267  Sum_probs=82.5

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCC---CCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEE
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD---KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   84 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi   84 (132)
                      .-++++||+|.|+|++++++||+++||+++.......   ......+|+..++....+......        ...++.|+
T Consensus         6 ~~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~--------~~~g~~Hi   77 (154)
T cd07237           6 GDQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHSLALAEGP--------GPKRIHHL   77 (154)
T ss_pred             CCCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCCCEEEEcCC--------CCceeEEE
Confidence            3478999999999999999999999999986542211   112355667664432222111111        12568899


Q ss_pred             EEEECCHH---HHHHHHHhCCCeEEccC-----CCccEEEEeCCCCCeEEEEee
Q 032856           85 CIAIRDVS---KLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        85 ~~~v~d~~---~~~~~l~~~g~~~~~~~-----~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      +|.|+|++   +++++|+++|+++...+     .+.+++|++||+||.|||...
T Consensus        78 af~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~  131 (154)
T cd07237          78 MLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWG  131 (154)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccC
Confidence            99998765   57999999999986532     356889999999999999754

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.88  E-value=6.6e-21  Score=112.09  Aligned_cols=106  Identities=21%  Similarity=0.294  Sum_probs=83.2

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeC-CeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   88 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   88 (132)
                      ++++|+.|.|+|++++++||+++||+++....+      ..+|+..+ +..+.+.....+         ..+..|++|.|
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~---------~~~~~h~~~~v   65 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA------GSVYLRCSEDDHHSLVLTEGD---------EPGVDALGFEV   65 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC------CeEEEecCCCCcEEEEEEeCC---------CCCceeEEEEc
Confidence            579999999999999999999999999887543      34677776 344444332221         13578999999


Q ss_pred             C---CHHHHHHHHHhCCCeEEccC----CCccEEEEeCCCCCeEEEEee
Q 032856           89 R---DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        89 ~---d~~~~~~~l~~~g~~~~~~~----~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      +   ++++++++++++|+++...+    .+.+.+|+.||+||.+|+...
T Consensus        66 ~~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          66 ASEEDLEALAAHLEAAGVAPEEASDPEPGVGRGLRFQDPDGHLLELFVE  114 (117)
T ss_pred             CCHHHHHHHHHHHHHcCCceEEcCccCCCCceEEEEECCCCCEEEEEEc
Confidence            8   68889999999999986543    456899999999999999864

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.87  E-value=1.5e-20  Score=110.23  Aligned_cols=109  Identities=17%  Similarity=0.189  Sum_probs=82.0

Q ss_pred             eeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCC-eEEEEEecCCCCCCCCCCCCCCCceEEEEEECC
Q 032856           12 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD   90 (132)
Q Consensus        12 ~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d   90 (132)
                      +.|++|.|+|++++++||+++||++...... .  ....+++..++ ....++......      ...+...|++|.|+|
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~f~v~d   71 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-G--GGDYAVFSTGGGAVGGLMKAPEPA------AGSPPGWLVYFAVDD   71 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-C--CCceEEEEeCCccEEEEecCCCCC------CCCCCeEEEEEEeCC
Confidence            4799999999999999999999999876543 1  12345566654 344444443321      112445789999999


Q ss_pred             HHHHHHHHHhCCCeEEccC----CCccEEEEeCCCCCeEEEEe
Q 032856           91 VSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        91 ~~~~~~~l~~~g~~~~~~~----~~~~~~~~~Dp~G~~iel~~  129 (132)
                      +++++++|+++|+++..++    .+++.++++|||||.|+|+|
T Consensus        72 i~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          72 VDAAAARVEAAGGKVLVPPTDIPGVGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHHHHHCCCEEEeCCcccCCcEEEEEEECCCCCEEEeEC
Confidence            9999999999999876443    36689999999999999975

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.87  E-value=7.4e-21  Score=112.82  Aligned_cols=107  Identities=26%  Similarity=0.412  Sum_probs=81.4

Q ss_pred             eeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEE--
Q 032856           11 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI--   88 (132)
Q Consensus        11 ~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v--   88 (132)
                      +++|+.|.|+|++++++||+++||+++....+      ..+++..++..+.+......       ....+..|++|.+  
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~-------~~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD------KGAYLEAGDLWLCLSVDANV-------GPAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC------CceEEecCCEEEEEecCCCC-------CCCCCeeeEEEEeCH
Confidence            57899999999999999999999999876433      23556666655444322211       1124568999999  


Q ss_pred             CCHHHHHHHHHhCCCeEEccC-CCccEEEEeCCCCCeEEEEee
Q 032856           89 RDVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        89 ~d~~~~~~~l~~~g~~~~~~~-~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      +|+++++++++++|+++...+ ..+..+||.|||||.|||+.-
T Consensus        68 ~dl~~~~~~l~~~G~~~~~~~~~~~~~~~f~DPdG~~ie~~~~  110 (121)
T cd07244          68 EDFASLKEKLRQAGVKEWKENTSEGDSFYFLDPDGHKLELHVG  110 (121)
T ss_pred             HHHHHHHHHHHHcCCcccCCCCCCccEEEEECCCCCEEEEEeC
Confidence            489999999999999875533 346799999999999999864

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.87  E-value=1.2e-20  Score=117.19  Aligned_cols=112  Identities=21%  Similarity=0.324  Sum_probs=77.4

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEEC
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR   89 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~   89 (132)
                      ++++||+|.|+|++++++||+++|||++......+.......|+..++....+.....         .+.++.|++|.|+
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~~~~i~l~~~---------~~~~~~Hiaf~v~   72 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGGVHDTALTGG---------NGPRLHHVAFWVP   72 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCCcceEEEecC---------CCCceeEEEEEcC
Confidence            6899999999999999999999999998654322222223455554433222221111         1245789999998


Q ss_pred             C---HHHHHHHHHhCCCeE--EccC-----CCccEEEEeCCCCCeEEEEee
Q 032856           90 D---VSKLKMILDKAGISY--TLSK-----SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        90 d---~~~~~~~l~~~g~~~--~~~~-----~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      |   +++++++|+++|+..  ...+     .+...+||+||+||.||+++.
T Consensus        73 ~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~  123 (161)
T cd07256          73 EPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTG  123 (161)
T ss_pred             CHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeec
Confidence            6   677788999999863  2222     234679999999999999864

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.87  E-value=1.3e-20  Score=111.52  Aligned_cols=114  Identities=14%  Similarity=0.137  Sum_probs=76.5

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEEC
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR   89 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~   89 (132)
                      +++.|+.|.|+|+++|++||+++||+++....+  .    .+.+. ++..+++.................+..|++|.|+
T Consensus         1 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~--~----~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~v~   73 (120)
T cd09011           1 MKFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG--E----NVTFE-GGFALQEGYSWLEGISKADIIEKSNNFELYFEEE   73 (120)
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCEEeeccC--c----eEEEe-ccceeccchhhhccCCcccccccCCceEEEEEeh
Confidence            478999999999999999999999999865322  1    11121 2222222110000000011112234579999999


Q ss_pred             CHHHHHHHHHhCCC-eEEcc----CCCccEEEEeCCCCCeEEEEee
Q 032856           90 DVSKLKMILDKAGI-SYTLS----KSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        90 d~~~~~~~l~~~g~-~~~~~----~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      |+++++++|+++|. ++..+    +.|.+.++|+|||||.|||.+.
T Consensus        74 dvd~~~~~l~~~g~~~~~~~~~~~~~g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          74 DFDAFLDKLKRYDNIEYVHPIKEHPWGQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             hhHHHHHHHHhcCCcEEecCcccCCCccEEEEEECCCCCEEEEecc
Confidence            99999999999985 55432    3466899999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.87  E-value=3.2e-20  Score=110.09  Aligned_cols=116  Identities=16%  Similarity=0.186  Sum_probs=83.2

Q ss_pred             EEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECCHHHH
Q 032856           15 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL   94 (132)
Q Consensus        15 v~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~~~~   94 (132)
                      -.|.|+|++++++||+++||+++....+.+......+.+..++..+.+.................+..|++|.|+|++++
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d~d~~   82 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGDGGVMVGSVRDDYRASSARAGGAGTQGVYVVVDDVDAH   82 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECCEEEEEecCCCcccccccccCCCceEEEEEEECCHHHH
Confidence            46899999999999999999999875432222223445666766666654433221110112224457899999999999


Q ss_pred             HHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEee
Q 032856           95 KMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        95 ~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      +++++++|+++..+    +.|.+.++++|||||.|+|.++
T Consensus        83 ~~~l~~~G~~v~~~~~~~~~g~~~~~~~DPdG~~~~l~~~  122 (122)
T cd08355          83 YERARAAGAEILREPTDTPYGSREFTARDPEGNLWTFGTY  122 (122)
T ss_pred             HHHHHHCCCEEeeCccccCCCcEEEEEECCCCCEEEEecC
Confidence            99999999988643    2467889999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.87  E-value=1.4e-20  Score=113.58  Aligned_cols=109  Identities=19%  Similarity=0.319  Sum_probs=79.8

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIA   87 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   87 (132)
                      .+++||+|.|+|++++++||+++||++......     ...+|+..++  ....+.......       ...++.|++|.
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~-----~~~~~~~~~~~~~~~~i~l~~~~~-------~~~g~~hiaf~   69 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK-----GRGAFLRAAGGGDHHNLFLIKTPA-------PMAGFHHAAFE   69 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec-----CcEEEEECCCCCCCcEEEEecCCC-------CCCcceEEEEE
Confidence            579999999999999999999999999876432     1346666642  222222211111       12578999999


Q ss_pred             ECCHHHHH---HHHHhCCCeEEccC-----CCccEEEEeCCCCCeEEEEee
Q 032856           88 IRDVSKLK---MILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        88 v~d~~~~~---~~l~~~g~~~~~~~-----~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      |+|++++.   ++|+++|+++...+     .+.+.+||+||+||.|||...
T Consensus        70 v~d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~  120 (134)
T cd08360          70 VGDIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGAD  120 (134)
T ss_pred             eCCHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEcc
Confidence            99888876   59999999876432     234568999999999999853

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.87  E-value=1.3e-20  Score=111.37  Aligned_cols=109  Identities=21%  Similarity=0.300  Sum_probs=81.1

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   88 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   88 (132)
                      +.+++|+.|.|+|++++++||+++||++.....+      ..+|+..++...+++......        ..+..|++|.+
T Consensus         1 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~v   66 (120)
T cd08362           1 VTALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD------GIVYLRATGSEHHILRLRRSD--------RNRLDVVSFSV   66 (120)
T ss_pred             CceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC------CEEEEECCCCccEEEEeccCC--------CCCCceEEEEe
Confidence            4689999999999999999999999999875432      235565544333333222111        13467999999


Q ss_pred             C---CHHHHHHHHHhCCCeEEccC------CCccEEEEeCCCCCeEEEEeeC
Q 032856           89 R---DVSKLKMILDKAGISYTLSK------SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        89 ~---d~~~~~~~l~~~g~~~~~~~------~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      +   ++++++++++++|+++..++      .+++.++|.||+||.|||++..
T Consensus        67 ~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          67 ASRADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             CCHHHHHHHHHHHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEecc
Confidence            4   78999999999999876432      3567899999999999998753

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.87  E-value=8.4e-21  Score=112.80  Aligned_cols=116  Identities=21%  Similarity=0.406  Sum_probs=82.6

Q ss_pred             eeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCC-CceeEEEEe----CCeEEEEEecCCCCCCCCCCCCCCCceEEE
Q 032856           11 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKL-PYRGAWLWV----GAEMIHLMELPNPDPLSGRPEHGGRDRHTC   85 (132)
Q Consensus        11 ~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~-~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~   85 (132)
                      +++||+|.|.|++++++||+++||++...+...... .....++..    ++..++++........  ......++.|++
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~--~~~~~~~~~hi~   78 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPK--GRRGPGQIHHIA   78 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCC--CCCCCCcEEEEE
Confidence            578999999999999999999999998766442221 112233332    2345666654332211  122335578999


Q ss_pred             EEEC---CHHHHHHHHHhCCCeEEcc--CCCccEEEEeCCCCCeEEEE
Q 032856           86 IAIR---DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFT  128 (132)
Q Consensus        86 ~~v~---d~~~~~~~l~~~g~~~~~~--~~~~~~~~~~Dp~G~~iel~  128 (132)
                      |.|+   ++++++++++++|+++...  ..+.+.+||+||+||.|||+
T Consensus        79 f~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          79 FSVPSEASLDAWRERLRAAGVPVSGVVDHFGERSIYFEDPDGLRLELT  126 (126)
T ss_pred             EEcCCHHHHHHHHHHHHHcCCcccceEeecceEEEEEECCCCCEEEeC
Confidence            9998   5699999999999987543  24678999999999999984

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.87  E-value=1.3e-20  Score=112.37  Aligned_cols=118  Identities=22%  Similarity=0.354  Sum_probs=88.0

Q ss_pred             eeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCC-CCCceeEEEEeCCeEEEEEecCCCCCCCC--CCCCCCCceEEEEEE
Q 032856           12 VHHVGILCENLERSLEFYQNILGLEINEARPHD-KLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAI   88 (132)
Q Consensus        12 ~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~hi~~~v   88 (132)
                      ++||+|.|+|++++++||+++||+++....... ......+++..++..+.++..........  ....+.+..|++|.|
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~~f~v   80 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLGNVQIELIEPLDDDSPIAKFLEKRGEGLHHIAFEV   80 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcCCEEEEEEEECCCCCcHHHHHhcCCCceEEEEEEe
Confidence            579999999999999999999999998755432 23345677777777888876544322111  012346788999999


Q ss_pred             CCHHHHHHHHHhCCCeEEccC----CCccEEEEeCCC---CCeEEEEe
Q 032856           89 RDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPD---ANALEFTQ  129 (132)
Q Consensus        89 ~d~~~~~~~l~~~g~~~~~~~----~~~~~~~~~Dp~---G~~iel~~  129 (132)
                      +|+++++++++++|+++...+    .+++.+++.||+   |+.|||+|
T Consensus        81 ~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          81 DDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             CCHHHHHHHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            999999999999999986543    245566666665   99999975

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.87  E-value=4e-20  Score=111.37  Aligned_cols=113  Identities=25%  Similarity=0.371  Sum_probs=82.6

Q ss_pred             eeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeC-C--eEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 032856           11 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-A--EMIHLMELPNPDPLSGRPEHGGRDRHTCIA   87 (132)
Q Consensus        11 ~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~-~--~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   87 (132)
                      +++|++|.|+|++++++||+++||+++....+.    ...+|+..+ .  ..+.++.......    .....+..|++|.
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~----~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~h~~f~   72 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL----GGLVFLSRDPDEHHQIALITGRPAAP----PPGPAGLNHIAFE   72 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC----CcEEEEEecCCCceEEEEEecCCCCC----CCCCCCceEEEEE
Confidence            589999999999999999999999998765431    134566554 2  2455544332211    1223567899999


Q ss_pred             ECCHH---HHHHHHHhCCCeEEcc--CCCccEEEEeCCCCCeEEEEeeC
Q 032856           88 IRDVS---KLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        88 v~d~~---~~~~~l~~~g~~~~~~--~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      |+|.+   +++++|.++|+++...  ..+.+.+|++||+||.|||++..
T Consensus        73 v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  121 (134)
T cd08348          73 VDSLDDLRDLYERLRAAGITPVWPVDHGNAWSIYFRDPDGNRLELFVDT  121 (134)
T ss_pred             eCCHHHHHHHHHHHHHCCCCccccCCCCceeEEEEECCCCCEEEEEEcC
Confidence            99766   4789999999987643  23468999999999999998754

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.86  E-value=3.8e-20  Score=110.07  Aligned_cols=110  Identities=15%  Similarity=0.181  Sum_probs=76.2

Q ss_pred             eeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCC-----------CCceeEEEEeC----CeEEEEEecCCCCCCCCCC
Q 032856           11 SVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----------LPYRGAWLWVG----AEMIHLMELPNPDPLSGRP   75 (132)
Q Consensus        11 ~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~-----------~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~   75 (132)
                      ++.|++|.|+|+++|++||+++|||+...+.+.+.           ..+..+++..+    +..++|....+..    .+
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~----~~   77 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIG----DY   77 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCC----CC
Confidence            68999999999999999999999999876554333           11122334332    2245554422211    12


Q ss_pred             CCCCCceEEEEEECCHHHHHHHHHhCCCeEEccCCCccEEEEeCCCCCeEEEEe
Q 032856           76 EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        76 ~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~Dp~G~~iel~~  129 (132)
                      ..++  .|++|.|++. ++.++|+++|+++...+.+  .+|++||||+.|||+.
T Consensus        78 ~~g~--~~~hlav~~~-d~~~~l~~~Gv~~~~~~~~--~~fi~DPDG~~ie~~~  126 (127)
T cd08358          78 ELGN--DFLGITIHSK-QAVSNAKKHNWPVTEVEDG--VYEVKAPGGYKFYLID  126 (127)
T ss_pred             CCCC--CEEEEEEECH-HHHHHHHHCCCceecCCCC--EEEEECCCCCEEEEec
Confidence            2222  3677777777 5669999999998876653  7899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.86  E-value=8.7e-22  Score=117.16  Aligned_cols=117  Identities=25%  Similarity=0.438  Sum_probs=82.7

Q ss_pred             eeeeEEEEeCCHHHHHHHHHhhcCCeeeccCC--CCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCC-CCCCceEEEEE
Q 032856           11 SVHHVGILCENLERSLEFYQNILGLEINEARP--HDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE-HGGRDRHTCIA   87 (132)
Q Consensus        11 ~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~hi~~~   87 (132)
                      +++||+|.|+|++++.+||+++||+++.....  .........++..++..+.++............. ......|+++.
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~   80 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEGHIELFLNPSPPPRASGHSFPEHGGHHIAFL   80 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSSCEEEEEEESSSSSSEEEHHHSHTSEEEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccccceeeeeeccccccccccccccccceeEEEE
Confidence            68999999999999999999999999988655  1222234455666666777766655433221110 00134567777


Q ss_pred             EC---CHHHHHHHHHhCCCeEEccC-----CCccEEEEeCCCCCeEEE
Q 032856           88 IR---DVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEF  127 (132)
Q Consensus        88 v~---d~~~~~~~l~~~g~~~~~~~-----~~~~~~~~~Dp~G~~iel  127 (132)
                      +.   |+++++++|+++|+++...+     .....+|++||+||.|||
T Consensus        81 ~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   81 AFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             ESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             eccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            75   77778999999999886543     234456799999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.86  E-value=3.8e-20  Score=109.63  Aligned_cols=108  Identities=23%  Similarity=0.304  Sum_probs=80.2

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeC--CeEEEEEecCCCCCCCCCCCCCCCceEEE
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDRHTC   85 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~hi~   85 (132)
                      +++++.|+.|.|+|++++++||+++||+++.....      ..+|+...  .....+......         ..+..|++
T Consensus         1 ~~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---------~~~~~hi~   65 (121)
T cd07266           1 NILRLGHVELRVTDLEKSREFYVDVLGLVETEEDD------DRIYLRGLEEFIHHSLVLTKAP---------VAGLGHIA   65 (121)
T ss_pred             CcceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC------CeEEEEecCCCceEEEEEeeCC---------CCceeEEE
Confidence            36799999999999999999999999999876432      23455432  122333322111         14578999


Q ss_pred             EEEC---CHHHHHHHHHhCCCeEEcc-----CCCccEEEEeCCCCCeEEEEee
Q 032856           86 IAIR---DVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        86 ~~v~---d~~~~~~~l~~~g~~~~~~-----~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      |.|.   |+++++++++++|+++...     +..++++|+.||+||.||++..
T Consensus        66 ~~v~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  118 (121)
T cd07266          66 FRVRSEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAE  118 (121)
T ss_pred             EECCCHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEec
Confidence            9994   8888999999999987543     2345899999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.86  E-value=7e-20  Score=108.14  Aligned_cols=110  Identities=16%  Similarity=0.201  Sum_probs=77.8

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCceEEEEEECCH
Q 032856           14 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV   91 (132)
Q Consensus        14 hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~   91 (132)
                      +..|.|+|++++++||+++|||+.....+      ..+.+..++.  .+.+................+...|++|.|+|+
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di   77 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDSD------WYVSLRSPDGGVELAFMLPGHETVPAAQYQFQGQGLILNFEVDDV   77 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEeccC------cEEEEecCCCceEEEEccCCCCCCcchhcccCCceEEEEEEECCH
Confidence            67899999999999999999999886522      2344555443  344443322211101112223335999999999


Q ss_pred             HHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEe
Q 032856           92 SKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        92 ~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~  129 (132)
                      ++++++++++|+++..+    +.+.+.++++||+||.|||+|
T Consensus        78 d~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          78 DAEYERLKAEGLPIVLPLRDEPWGQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             HHHHHHHHhcCCCeeeccccCCCcceEEEEECCCCCEEEEEC
Confidence            99999999999987543    245689999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.86  E-value=1.4e-19  Score=107.09  Aligned_cols=113  Identities=19%  Similarity=0.175  Sum_probs=83.3

Q ss_pred             EEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECCHHHH
Q 032856           15 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL   94 (132)
Q Consensus        15 v~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~~~~   94 (132)
                      +.|.|+|++++.+||+++||+++.............+.+..++..+.+........  .......+..|++|.|+|++++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~v~d~~~~   82 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGDSVLMLADEFPEHG--SPASWGGTPVSLHLYVEDVDAT   82 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECCEEEEEecCCcccC--CCCCCCCceEEEEEEeCCHHHH
Confidence            45889999999999999999998875543333334455667777666654332211  0112234467999999999999


Q ss_pred             HHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEe
Q 032856           95 KMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        95 ~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~  129 (132)
                      ++++.++|+++..+    +.+.+.++++||+||.|+|.+
T Consensus        83 ~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          83 FARAVAAGATSVMPPADQFWGDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             HHHHHHCCCeEecCcccccccceEEEEECCCCCEEEEec
Confidence            99999999987543    356789999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.86  E-value=3.5e-20  Score=108.46  Aligned_cols=105  Identities=23%  Similarity=0.396  Sum_probs=79.1

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEEC--CH
Q 032856           14 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--DV   91 (132)
Q Consensus        14 hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~--d~   91 (132)
                      ||.|.|+|++++++||+++||++.....+      ..+++..++..+.+.......      ....+..|++|.|+  |+
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~------~~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS------KEAYFELAGLWICLMEEDSLQ------GPERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC------ceeEEEecCeEEEeccCCCcC------CCCCCccEEEEEcCHHHH
Confidence            89999999999999999999999876543      235566665554443322111      12245689999995  79


Q ss_pred             HHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEee
Q 032856           92 SKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        92 ~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      ++++++++++|+++...    ..+++.+|++||+||.|||..-
T Consensus        69 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          69 DEYTERLKALGVEMKPERPRVQGEGRSIYFYDPDGHLLELHAG  111 (113)
T ss_pred             HHHHHHHHHcCCccCCCccccCCCceEEEEECCCCCEEEEEeC
Confidence            99999999999997642    1257899999999999999864

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.85  E-value=6.6e-20  Score=111.86  Aligned_cols=108  Identities=16%  Similarity=0.292  Sum_probs=79.8

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEEC
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR   89 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~   89 (132)
                      .+++||.|.|+|++++++||+++|||+......     ...+|+..++....+......         ..++.|++|.|+
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~-----~~~~~l~~~~~~~~~~l~~~~---------~~~~~hiaf~v~   68 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG-----DQMAFLRCNSDHHSIAIARGP---------HPSLNHVAFEMP   68 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC-----CeEEEEECCCCcceEEEccCC---------CCceEEEEEECC
Confidence            489999999999999999999999999864321     134566666433333221111         245789999999


Q ss_pred             CHHHHH---HHHHhCCCeEEccC-----CCccEEEEeCCCCCeEEEEeeC
Q 032856           90 DVSKLK---MILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        90 d~~~~~---~~l~~~g~~~~~~~-----~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      |++++.   ++|+++|+++...+     .+.+.+||+||+||.|||++..
T Consensus        69 d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~  118 (144)
T cd07239          69 SIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSEL  118 (144)
T ss_pred             CHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCc
Confidence            888875   89999999886432     2346689999999999998753

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.85  E-value=1.3e-19  Score=107.70  Aligned_cols=115  Identities=17%  Similarity=0.183  Sum_probs=79.1

Q ss_pred             eeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCC--CC----CCCCCCCCCceEEE
Q 032856           12 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD--PL----SGRPEHGGRDRHTC   85 (132)
Q Consensus        12 ~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~----~~~~~~~~~~~hi~   85 (132)
                      +.|+.|.|+|++++++||+++||++........    ....+..++..+.+.......  ..    +.......+..|++
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHESG----DYGELETGETTLAFASHDLAESNLKGGFVKADPAQPPAGFEIA   76 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecCCC----cEEEecCCcEEEEEEcccccccccccCccCCccccCCCcEEEE
Confidence            479999999999999999999999986533211    112233344444444322110  00    01111223346899


Q ss_pred             EEECCHHHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEee
Q 032856           86 IAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        86 ~~v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      |.|+|+++++++++++|+++..+    +.|.+.++++|||||.|||.++
T Consensus        77 ~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          77 FVTDDVAAAFARAVEAGAVLVSEPKEKPWGQTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             EEcCCHHHHHHHHHHcCCEeccCCccCCCCcEEEEEECCCCCEEEEecC
Confidence            99999999999999999987543    3456789999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.85  E-value=1e-19  Score=109.36  Aligned_cols=110  Identities=19%  Similarity=0.342  Sum_probs=80.5

Q ss_pred             eeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECCHH
Q 032856           13 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS   92 (132)
Q Consensus        13 ~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~~   92 (132)
                      +||.|.|+|++++++||+++||++.......+ .....+|+..++....+.......        ..++.|++|.|+|++
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~--------~~~~~hl~~~v~d~~   71 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDEDHHDLALFPGPE--------RPGLHHVAFEVESLD   71 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCCCcceEEEEcCCC--------CCCeeEEEEEcCCHH
Confidence            59999999999999999999999987654322 223556777655333332222111        256889999999875


Q ss_pred             ---HHHHHHHhCCCeEEccC-----CCccEEEEeCCCCCeEEEEeeC
Q 032856           93 ---KLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        93 ---~~~~~l~~~g~~~~~~~-----~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                         +++++++++|+++...+     .+.+.++++||+||.|||.+..
T Consensus        72 ~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~  118 (131)
T cd08343          72 DILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEM  118 (131)
T ss_pred             HHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCC
Confidence               67899999999886432     2357889999999999998753

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>PRK06724 hypothetical protein; Provisional

Probab=99.85  E-value=8.4e-20  Score=109.25  Aligned_cols=108  Identities=22%  Similarity=0.275  Sum_probs=74.5

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhc---CCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEE
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNIL---GLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   84 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~l---g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi   84 (132)
                      +..+++||.|.|+|+++|++||+++|   |++....         .. +..+...+.+.......      ....+..|+
T Consensus         4 ~~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~---------~~-~~~g~~~l~l~~~~~~~------~~~~g~~h~   67 (128)
T PRK06724          4 LRAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNE---------VA-YSTGESEIYFKEVDEEI------VRTLGPRHI   67 (128)
T ss_pred             cCcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeee---------Ee-eeCCCeeEEEecCCccc------cCCCCceeE
Confidence            46689999999999999999999976   5554321         01 11122233332211110      112457899


Q ss_pred             EEEE---CCHHHHHHHHHhCCCeEEccC-------CCccEEEEeCCCCCeEEEEeeC
Q 032856           85 CIAI---RDVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        85 ~~~v---~d~~~~~~~l~~~g~~~~~~~-------~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      ||.|   +++++++++|+++|+++..++       .+.+++||+|||||.|||..-+
T Consensus        68 af~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  124 (128)
T PRK06724         68 CYQAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYTP  124 (128)
T ss_pred             EEecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeCC
Confidence            9998   689999999999999875432       2347889999999999997643

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.85  E-value=3.1e-19  Score=105.60  Aligned_cols=108  Identities=24%  Similarity=0.428  Sum_probs=78.3

Q ss_pred             eeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECC--
Q 032856           13 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD--   90 (132)
Q Consensus        13 ~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d--   90 (132)
                      .|+.|.|+|++++++||+++||++.....+  .   ... +..++..+.+........    .  .++..|++|.|+|  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~--~---~~~-~~~~~~~~~~~~~~~~~~----~--~~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD--D---YAK-FLLEDPRLNFVLNERPGA----P--GGGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC--C---eeE-EEecCCceEEEEecCCCC----C--CCCeeEEEEEeCCHH
Confidence            599999999999999999999998866532  1   223 333333444433322211    0  1467899999987  


Q ss_pred             -HHHHHHHHHhCCCeEEccCC------CccEEEEeCCCCCeEEEEeeCC
Q 032856           91 -VSKLKMILDKAGISYTLSKS------GRPAIFTRDPDANALEFTQVDG  132 (132)
Q Consensus        91 -~~~~~~~l~~~g~~~~~~~~------~~~~~~~~Dp~G~~iel~~~~~  132 (132)
                       ++++++++.++|+++...+.      ..+.+|++||+||.|||++..+
T Consensus        71 dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  119 (120)
T cd07254          71 EVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTLG  119 (120)
T ss_pred             HHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEeec
Confidence             78889999999999865431      2467999999999999998653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.85  E-value=1.8e-19  Score=106.63  Aligned_cols=114  Identities=26%  Similarity=0.497  Sum_probs=82.9

Q ss_pred             eeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCC-eEEEEEecCCCCCCC--CCCCCCCCceEEEEEE
Q 032856           12 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLS--GRPEHGGRDRHTCIAI   88 (132)
Q Consensus        12 ~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~--~~~~~~~~~~hi~~~v   88 (132)
                      +.|+.|.|+|++++++||+++|||++..... +    ..+++..++ ..+.++.........  .......+..|++|.+
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~~~-~----~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v   75 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLKED-R----RLAFFWVGGRGMLLLFDPGATSTPGGEIPPHGGSGPGHFAFAI   75 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeecCC-C----ceEEEEcCCCcEEEEEecCCcccccCCCCCCCCCCccEEEEEc
Confidence            4689999999999999999999999887411 1    346677765 344454433221000  0111235678999999


Q ss_pred             C--CHHHHHHHHHhCCCeEEccC---CCccEEEEeCCCCCeEEEEee
Q 032856           89 R--DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        89 ~--d~~~~~~~l~~~g~~~~~~~---~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      +  |++++++++.++|+++....   .+.+.+|++||+||.|||++.
T Consensus        76 ~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          76 PAEELAEWEAHLEAKGVAIESEVQWPRGGRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             CHHHHHHHHHHHHhcCCceeccccCCCCeeEEEEECCCCCEEEEecC
Confidence            4  89999999999999876543   467899999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.85  E-value=1.4e-19  Score=107.53  Aligned_cols=111  Identities=22%  Similarity=0.294  Sum_probs=74.8

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCC---CCCCCCCCCCceEEEE--EE
Q 032856           14 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP---LSGRPEHGGRDRHTCI--AI   88 (132)
Q Consensus        14 hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~hi~~--~v   88 (132)
                      ||+|.|+|++++++||+++||+++.....      ..+.+..++..+.+........   .........+..|+++  .+
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~   75 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE------TWVDFDFFGHQLVAHLSPNFNADASDNAVDGHPVPVPHFGLILSE   75 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC------CcccccccCcEEEEEeccCCCcccccCCCCCCccCCceEEEEEeH
Confidence            99999999999999999999999865422      1122333444444433222110   0011112233567654  55


Q ss_pred             CCHHHHHHHHHhCCCeEEccC--------CCccEEEEeCCCCCeEEEEee
Q 032856           89 RDVSKLKMILDKAGISYTLSK--------SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        89 ~d~~~~~~~l~~~g~~~~~~~--------~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      +|+++++++|+++|+++..++        .+.+.+|++|||||.|||..+
T Consensus        76 ~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  125 (125)
T cd08357          76 EEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKAF  125 (125)
T ss_pred             HHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEeeC
Confidence            799999999999999886432        235889999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.84  E-value=1e-19  Score=123.15  Aligned_cols=114  Identities=18%  Similarity=0.310  Sum_probs=79.5

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCc-eeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEE
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-RGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC   85 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~   85 (132)
                      +.+++++||+|.|+|++++++||+++|||+.......+.... ...|+..+.....+.....       + ..+.+.|+|
T Consensus       141 ~~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~g~~~Hia  212 (303)
T TIGR03211       141 VGARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNKAHDIAFVGD-------P-EPGKLHHVS  212 (303)
T ss_pred             cCceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCCCcccceecC-------C-CCCceEEEE
Confidence            457899999999999999999999999999865433222211 3445554332111111100       0 123478999


Q ss_pred             EEECCHHH---HHHHHHhCCCeEEccC-----CCccEEEEeCCCCCeEEEE
Q 032856           86 IAIRDVSK---LKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFT  128 (132)
Q Consensus        86 ~~v~d~~~---~~~~l~~~g~~~~~~~-----~~~~~~~~~Dp~G~~iel~  128 (132)
                      |.|+|+++   ++++|+++|+++..++     ...+++||+||+||.|||.
T Consensus       213 f~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~  263 (303)
T TIGR03211       213 FFLDSWEDVLKAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETF  263 (303)
T ss_pred             EEcCCHHHHHHHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEe
Confidence            99996544   6789999999986543     1357899999999999997

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.84  E-value=3.1e-19  Score=105.65  Aligned_cols=104  Identities=25%  Similarity=0.371  Sum_probs=78.4

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECCHHH
Q 032856           14 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK   93 (132)
Q Consensus        14 hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~~~   93 (132)
                      ...|.|+|++++++||++ |||+.....+.     ..+++..++..+++.......+       .....|++|.|+|+++
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~-----~~~~~~~~~~~l~l~~~~~~~~-------~~~~~~~~~~v~dvd~   71 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQAA-----GYMILRRGDLELHFFAHPDLDP-------ATSPFGCCLRLPDVAA   71 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCCC-----CEEEEEcCCEEEEEEecCcCCC-------CCCcceEEEEeCCHHH
Confidence            467999999999999999 99998765431     2455666777777765432111       1223579999999999


Q ss_pred             HHHHHHhCCCeEE--------cc---CCCccEEEEeCCCCCeEEEEee
Q 032856           94 LKMILDKAGISYT--------LS---KSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        94 ~~~~l~~~g~~~~--------~~---~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      ++++|+++|+++.        ..   +.+.+.++++|||||.|||.|.
T Consensus        72 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          72 LHAEFRAAGLPETGSGIPRITPPEDQPWGMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHHHHhCccccccCCCcccCCcCCCCceeEEEEECCCCCEEEeecC
Confidence            9999999999742        11   2577899999999999999874

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.83  E-value=4.4e-19  Score=103.85  Aligned_cols=104  Identities=23%  Similarity=0.321  Sum_probs=71.8

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEecCCCCCCCCCCCCCCCceEE--EE
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHT--CI   86 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~hi--~~   86 (132)
                      ++++||+|.|+|++++++||+ .|||++....+      . .++.. +.....+......         ...+.|+  .+
T Consensus         1 ~~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~   63 (112)
T cd08344           1 HSIDHFALEVPDLEVARRFYE-AFGLDVREEGD------G-LELRTAGNDHRWARLLEGA---------RKRLAYLSFGI   63 (112)
T ss_pred             CceeEEEEecCCHHHHHHHHH-HhCCcEEeecC------c-eEEEecCCCceEEEeecCC---------CCceeeEEEEe
Confidence            368999999999999999997 69999875421      1 22333 3222222111111         1224444  44


Q ss_pred             EECCHHHHHHHHHhCCCeEEccC--CCccEEEEeCCCCCeEEEEee
Q 032856           87 AIRDVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        87 ~v~d~~~~~~~l~~~g~~~~~~~--~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      .++|+++++++++++|+++...+  .+.+.+||.||+||.|||..-
T Consensus        64 ~~~d~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~DP~Gn~iel~~~  109 (112)
T cd08344          64 FEDDFAAFARHLEAAGVALAAAPPGADPDGVWFRDPDGNLLQVKVA  109 (112)
T ss_pred             EhhhHHHHHHHHHHcCCceecCCCcCCCCEEEEECCCCCEEEEecC
Confidence            55799999999999999876543  345789999999999999853

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.83  E-value=2.4e-19  Score=108.97  Aligned_cols=105  Identities=17%  Similarity=0.223  Sum_probs=77.5

Q ss_pred             eeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCe-EEEEEecCCCCCCCCCCCCCCCceEEEEEECCH
Q 032856           13 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV   91 (132)
Q Consensus        13 ~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~   91 (132)
                      +||+|.|+|++++.+||+++|||+...+..     ...+|+...+. ..+.+....        ...+++.|++|.|+|.
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~-----~~~~~l~~~~~~~~h~~~~~~--------~~~~gl~Hiaf~v~~~   67 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIE-----DRIVFMRCHPNPFHHTFAVGP--------ASSSHFHHVNFMVTDI   67 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeC-----CEEEEEEcCCCCCcceeeecc--------CCCCceEEEEEECCCH
Confidence            599999999999999999999999876532     14566665432 223322111        1236789999999865


Q ss_pred             ---HHHHHHHHhCCCeEEccC-----CCccEEEEeCCCCCeEEEEee
Q 032856           92 ---SKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        92 ---~~~~~~l~~~g~~~~~~~-----~~~~~~~~~Dp~G~~iel~~~  130 (132)
                         ++++++|+++|+++..++     .+.+.+||+||+|+.|||...
T Consensus        68 ~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  114 (141)
T cd07258          68 DDIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFG  114 (141)
T ss_pred             HHHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeC
Confidence               456999999999876432     356789999999999998753

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.83  E-value=8.5e-19  Score=102.25  Aligned_cols=105  Identities=30%  Similarity=0.470  Sum_probs=79.4

Q ss_pred             EEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECCHHHHH
Q 032856           16 GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK   95 (132)
Q Consensus        16 ~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~~~~~   95 (132)
                      .|.|+|++++++||+++|||+.......    ...+++..++..+++.........     ...+..|++|.++|+++++
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~   73 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHPE----PGYAFLSRGGAQLMLSEHDGDEPV-----PLGRGGSVYIEVEDVDALY   73 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcCC----CcEEEEEeCCEEEEEeccCCCCCC-----CCCCcEEEEEEeCCHHHHH
Confidence            6899999999999999999998775431    134556667767777654332211     2234568999999999999


Q ss_pred             HHHHhCCCe-EEcc----CCCccEEEEeCCCCCeEEEEe
Q 032856           96 MILDKAGIS-YTLS----KSGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        96 ~~l~~~g~~-~~~~----~~~~~~~~~~Dp~G~~iel~~  129 (132)
                      ++++++|++ +..+    +.+.+.++++||+|+.|||.|
T Consensus        74 ~~l~~~G~~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          74 AELKAKGADLIVYPPEDQPWGMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHHHHcCCcceecCccCCCcccEEEEEECCCCCEEEecC
Confidence            999999998 4332    245689999999999999976

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.83  E-value=4.6e-19  Score=102.48  Aligned_cols=108  Identities=30%  Similarity=0.442  Sum_probs=85.0

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECCHHH
Q 032856           14 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK   93 (132)
Q Consensus        14 hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~~~   93 (132)
                      |++|.|+|++++.+||+++||++.......  .....+++..++..+++....+....    ....+..|++|.|+|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~~~~i~l~~~~~~~~~----~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN--GGAEFAVLGLGGTRLELFEGDEPAPA----PSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc--CCEEEEEEecCCceEEEecCCCCCCc----ccCCCeeEEEEECCCHHH
Confidence            899999999999999999999998876542  22355666666667777766543221    233567899999999999


Q ss_pred             HHHHHHhCCCeEEccC----CCccEEEEeCCCCCeEEE
Q 032856           94 LKMILDKAGISYTLSK----SGRPAIFTRDPDANALEF  127 (132)
Q Consensus        94 ~~~~l~~~g~~~~~~~----~~~~~~~~~Dp~G~~iel  127 (132)
                      ++++|.++|+.+...+    .+.+.+++.||+|+.|||
T Consensus        75 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERLKAAGVEVLGEPREEPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHHHHcCCcccCCCcCCCCCcEEEEEECCCCcEEeC
Confidence            9999999999876543    467999999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.82  E-value=5.1e-19  Score=103.79  Aligned_cols=100  Identities=18%  Similarity=0.213  Sum_probs=75.5

Q ss_pred             EEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECCHHHH
Q 032856           15 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL   94 (132)
Q Consensus        15 v~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~~~~   94 (132)
                      ..|.|+|++++++||++ |||+.....+      ..+++..++..+.+........        ....+++|.|+|++++
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~l~~~~~~l~l~~~~~~~~--------~~~~~~~~~v~did~~   69 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEND------NLAYFRLGNCAFYLQDYYVKDW--------AENSMLHLEVDDLEAY   69 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecCC------CEEEEEcCCEEEEeecCCCccc--------ccCCEEEEEECCHHHH
Confidence            45889999999999988 9999987532      3467777776665543221111        1235799999999999


Q ss_pred             HHHHHhCCCeEE---------ccCCCccEEEEeCCCCCeEEEEe
Q 032856           95 KMILDKAGISYT---------LSKSGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        95 ~~~l~~~g~~~~---------~~~~~~~~~~~~Dp~G~~iel~~  129 (132)
                      +++|+++|+++.         ..+.+.+.++|+|||||.|+|.|
T Consensus        70 ~~~l~~~G~~~~~~~~~~~~~~~~~g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          70 YEHIKALGLPKKFPGVKLPPITQPWWGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHHHHcCCcccccceecCccccCCCcEEEEEECCCccEEEeeC
Confidence            999999998642         12357799999999999999865

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.82  E-value=6.5e-19  Score=118.79  Aligned_cols=116  Identities=26%  Similarity=0.398  Sum_probs=80.4

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEE
Q 032856            6 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC   85 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~   85 (132)
                      .+.+++++||+|.|+|+++|++||+++||++...............|+..++....+.. ..        ..+.++.|+|
T Consensus       131 ~~~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------~~~~~~~Hia  201 (294)
T TIGR02295       131 GVSPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKGGVHDIAL-TN--------GNGPRLHHIA  201 (294)
T ss_pred             CccceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCCCcCceEe-ec--------CCCCceeeEE
Confidence            35678999999999999999999999999998765432222223445544322111111 11        1125689999


Q ss_pred             EEECCHH---HHHHHHHhCCCe--EEccC-----CCccEEEEeCCCCCeEEEEee
Q 032856           86 IAIRDVS---KLKMILDKAGIS--YTLSK-----SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        86 ~~v~d~~---~~~~~l~~~g~~--~~~~~-----~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      |.|+|.+   ++.++|+++|++  +...+     .+...+|++||+||.|||++.
T Consensus       202 f~v~d~~~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~  256 (294)
T TIGR02295       202 YWVHDPLNIIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTG  256 (294)
T ss_pred             EEcCCHHHHHHHHHHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEec
Confidence            9999854   568999999987  43332     134578999999999999864

The enzyme from Bacillus brevis contains manganese.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.82  E-value=2.2e-18  Score=101.00  Aligned_cols=106  Identities=22%  Similarity=0.264  Sum_probs=77.5

Q ss_pred             EEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECC---
Q 032856           15 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---   90 (132)
Q Consensus        15 v~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d---   90 (132)
                      +.|.|+|+++|++||+++||+++....+      ..+.+.. ++..+.++.......   ......+..|++|.|+|   
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~v~~~~~   72 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELSP------TFALFVLGSGVKLGLWSRHTVEP---ASDATGGGSELAFMVDDGAA   72 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCCC------ceEEEEeCCCcEEEEeeccccCC---CCCCCCCceEEEEEcCCHHH
Confidence            5789999999999999999999776432      2234454 455666665433221   11123456899999985   


Q ss_pred             HHHHHHHHHhCCCeEEccC---CCccEEEEeCCCCCeEEEEe
Q 032856           91 VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        91 ~~~~~~~l~~~g~~~~~~~---~~~~~~~~~Dp~G~~iel~~  129 (132)
                      ++++++++.++|+++..++   ..++.++|+|||||.|||+.
T Consensus        73 ~~~~~~~~~~~g~~v~~~~~~~~~g~~~~~~DPdGn~ie~~~  114 (114)
T cd07261          73 VDALYAEWQAKGVKIIQEPTEMDFGYTFVALDPDGHRLRVFA  114 (114)
T ss_pred             HHHHHHHHHHCCCeEecCccccCCccEEEEECCCCCEEEeeC
Confidence            8888999999999887543   34578999999999999963

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.82  E-value=7.2e-19  Score=118.22  Aligned_cols=108  Identities=20%  Similarity=0.267  Sum_probs=81.3

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   88 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   88 (132)
                      +.+++|++|.|+|+++|++||+++|||+...+..  .   ...|+..+...+.+.....+.         .++.|++|.|
T Consensus         1 ~~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~--~---~~~~~~~~~~~~~~~l~~~~~---------~~~~~~~f~V   66 (286)
T TIGR03213         1 VRGLGYLGIGVSDVDAWREFATEVLGMMVASEGE--N---DALYLRLDSRAHRIAVHPGES---------DDLAYAGWEV   66 (286)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHhccCcccccCCC--C---ceEEEEcCCCceEEEEEECCc---------CCeeeEeeee
Confidence            4689999999999999999999999998765322  1   234567754333343322221         3467899999


Q ss_pred             CC---HHHHHHHHHhCCCeEEccC-------CCccEEEEeCCCCCeEEEEee
Q 032856           89 RD---VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        89 ~d---~~~~~~~l~~~g~~~~~~~-------~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      +|   ++++.++|+++|+++...+       ...+.++|.|||||.+||+..
T Consensus        67 ~~~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~~  118 (286)
T TIGR03213        67 ADEAGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYYG  118 (286)
T ss_pred             CCHHHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEEc
Confidence            98   8888999999999876432       346789999999999999863

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.82  E-value=1.9e-18  Score=101.01  Aligned_cols=102  Identities=18%  Similarity=0.166  Sum_probs=73.9

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCC---eEEEEEecCCCCCCCCCCCCCCCceEEEEEECC
Q 032856           14 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA---EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD   90 (132)
Q Consensus        14 hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d   90 (132)
                      +..|.|+|++++++||+++|||+......      ..+++..++   ..+.+......         +....|++|.|+|
T Consensus         3 ~~~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~i~~~v~d   67 (112)
T cd07238           3 VPNLPVADPEAAAAFYADVLGLDVVMDHG------WIATFASPQNMTVQVSLATEGGT---------ATVVPDLSIEVDD   67 (112)
T ss_pred             cceEecCCHHHHHHHHHHhcCceEEEcCC------ceEEEeecCCCCcEEEEecCCCC---------CCCCCEEEEEeCC
Confidence            34689999999999999999999864311      233344422   23333322111         1224689999999


Q ss_pred             HHHHHHHHHhCCCeEEccC----CCccEEEEeCCCCCeEEEEee
Q 032856           91 VSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        91 ~~~~~~~l~~~g~~~~~~~----~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      +++++++|+++|+++...+    .+.+.+|+.||+||.|+|.+.
T Consensus        68 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          68 VDAALARAVAAGFAIVYGPTDEPWGVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHHHHHHhcCCeEecCCccCCCceEEEEEECCCCCEEEEEEc
Confidence            9999999999999976533    355789999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.82  E-value=1.2e-18  Score=103.60  Aligned_cols=113  Identities=18%  Similarity=0.141  Sum_probs=76.4

Q ss_pred             eeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeC-CeEEEEEecCCCC---CCCCCCCCCCCceEEEEE
Q 032856           12 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPD---PLSGRPEHGGRDRHTCIA   87 (132)
Q Consensus        12 ~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~---~~~~~~~~~~~~~hi~~~   87 (132)
                      +.+++|.|+|+++|++||++ |||+.......+.    .+++..+ +..+.+.......   ..........+..|++|.
T Consensus         1 ~~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~----~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l~f~   75 (124)
T cd09012           1 MIFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEK----AACMVISDNIFVMLLTEDFFQTFTPKPIADTKKSTEVLISLS   75 (124)
T ss_pred             CEEEEeecCCHHHHHHHHHH-CCCEEccccCCCC----eEEEEECCceEEEEEcHHHHhhccCCCcccCCCCCeEEEEEe
Confidence            46899999999999999987 8998765333221    2344444 3455555432110   000000122345699999


Q ss_pred             EC---CHHHHHHHHHhCCCeEEccC---CCccEEEEeCCCCCeEEEEe
Q 032856           88 IR---DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        88 v~---d~~~~~~~l~~~g~~~~~~~---~~~~~~~~~Dp~G~~iel~~  129 (132)
                      |+   ++++++++++++|+++..++   .+.+.+||+|||||.|||+.
T Consensus        76 v~~~~~vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          76 ADSREEVDELVEKALAAGGKEFREPQDHGFMYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             CCCHHHHHHHHHHHHHCCCcccCCcccCCceEEEEEECCCCCEEEEEE
Confidence            98   57788999999999886543   24468899999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.81  E-value=2.3e-18  Score=102.04  Aligned_cols=112  Identities=21%  Similarity=0.294  Sum_probs=75.2

Q ss_pred             eeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeC-CeEEEEEecCCCCC-CCCCCCCCCCceEEEEEEC
Q 032856           12 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDP-LSGRPEHGGRDRHTCIAIR   89 (132)
Q Consensus        12 ~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~-~~~~~~~~~~~~hi~~~v~   89 (132)
                      ++||+|.|+|+++|++||+. |||+.......    ...+.+..+ +..+.+........ ....+....+..|++|.++
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~----~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~   75 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADD----EPHVEAVLPGGVRLAWDTVESIRSFTPGWTPTGGHRIALAFLCE   75 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCC----CCcEEEEeCCCEEEEEEcccceeeecCCCCCCCCCcEEEEEEcC
Confidence            57999999999999999975 99987653321    123445554 44444432211100 0011112234468888875


Q ss_pred             ---CHHHHHHHHHhCCCeEEccC----CCccEEEEeCCCCCeEEEE
Q 032856           90 ---DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFT  128 (132)
Q Consensus        90 ---d~~~~~~~l~~~g~~~~~~~----~~~~~~~~~Dp~G~~iel~  128 (132)
                         |+++++++|+++|+++...+    .+.+.++++|||||.|||+
T Consensus        76 ~~~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  121 (122)
T cd07235          76 TPAEVDALYAELVGAGYPGHKEPWDAPWGQRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             CHHHHHHHHHHHHHCCCCcCCCCccCCCCCEEEEEECCCCCEEEEe
Confidence               89999999999999865432    4567899999999999997

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.81  E-value=1.8e-18  Score=102.63  Aligned_cols=107  Identities=23%  Similarity=0.319  Sum_probs=74.5

Q ss_pred             eeeEEEEeCCHHHHHHHHHhh---cCCeeeccCCCCCCCceeEEEEeC--CeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 032856           12 VHHVGILCENLERSLEFYQNI---LGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDRHTCI   86 (132)
Q Consensus        12 ~~hv~i~v~d~~~~~~fy~~~---lg~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   86 (132)
                      ++|+.|.|+|++++++||+++   ||++......  .   ..+++..+  +..+.+.......     .....+..|++|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~--~---~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~hi~f   70 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMEDG--P---GAVGYGKGGGGPDFWVTKPFDGE-----PATAGNGTHVAF   70 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeecC--C---ceeEeccCCCCceEEEeccccCC-----CCCCCCceEEEE
Confidence            579999999999999999998   6888765431  1   12333333  3455554432211     111233579999


Q ss_pred             EECC---HHHHHHHHHhCCCeEEccC-------CCccEEEEeCCCCCeEEEE
Q 032856           87 AIRD---VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFT  128 (132)
Q Consensus        87 ~v~d---~~~~~~~l~~~g~~~~~~~-------~~~~~~~~~Dp~G~~iel~  128 (132)
                      .|+|   ++++++++.++|+.+...+       .+.+.+||+||+||.|||+
T Consensus        71 ~v~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          71 AAPSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             ECCCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            9996   7888999999999876432       1235789999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.81  E-value=1.4e-18  Score=116.77  Aligned_cols=113  Identities=15%  Similarity=0.246  Sum_probs=80.7

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCC-C--ceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEE
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKL-P--YRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC   85 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~-~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~   85 (132)
                      ..+++||+|.|+|++++.+||+++|||+.......... +  ...+|+..++....+.....+        ...++.|++
T Consensus       140 ~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~l~~~~--------~~~~~~Hia  211 (286)
T TIGR03213       140 DQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNERHHSLAFAAGP--------SEKRLNHLM  211 (286)
T ss_pred             CccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCCcceEEEecCC--------CCCceEEEE
Confidence            56899999999999999999999999998764321111 1  135677665443323221111        125688999


Q ss_pred             EEECCHHH---HHHHHHhCCCeEEc-cC---CCccEEEEeCCCCCeEEEEe
Q 032856           86 IAIRDVSK---LKMILDKAGISYTL-SK---SGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        86 ~~v~d~~~---~~~~l~~~g~~~~~-~~---~~~~~~~~~Dp~G~~iel~~  129 (132)
                      |+|+|.++   +.++|+++|+.... +.   .+..++|++||+|+.||+.+
T Consensus       212 f~v~d~~~v~~~~~~l~~~G~~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~  262 (286)
T TIGR03213       212 LEVDTLDDVGLALDRVDADGIVASTLGRHTNDHMVSFYVATPSGWLVEYGW  262 (286)
T ss_pred             EEcCCHHHHHHHHHHHHHCCCEEecCCcCCCCCeEEEEEECCCCcEEEeec
Confidence            99998777   79999999993322 11   35678999999999999975

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.81  E-value=1.7e-18  Score=100.42  Aligned_cols=100  Identities=28%  Similarity=0.536  Sum_probs=72.3

Q ss_pred             EEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCe----EEEEEecCCCCCCCCCCCCCCCceEEEEEECCHH
Q 032856           17 ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS   92 (132)
Q Consensus        17 i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~~   92 (132)
                      |.|+|++++++||+++||+++....+      ..+.+..+..    ...+......      .....+..|++|.|+|++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~v~dv~   68 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP------DYVDFSLGFRFHDGVIEFLQFPDP------PGPPGGGFHLCFEVEDVD   68 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET------SEEEEEETEEEEEEEEEEEEEESS------SSSSSSEEEEEEEESHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC------CeEEEEeccchhhhhHHHccCCcc------ccCCCceeEEEEEEcCHH
Confidence            68999999999999999999998433      2344454321    1223322211      112356789999999999


Q ss_pred             HHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEE
Q 032856           93 KLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  128 (132)
Q Consensus        93 ~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~  128 (132)
                      +++++++++|+++..+    +.+.+.+++.||+||.|||+
T Consensus        69 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   69 ALYERLKELGAEIVTEPRDDPWGQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HHHHHHHHTTSEEEEEEEEETTSEEEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHCCCeEeeCCEEcCCCeEEEEEECCCCCEEEeC
Confidence            9999999999987543    34679999999999999985

...

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.80  E-value=3.7e-18  Score=115.10  Aligned_cols=108  Identities=21%  Similarity=0.272  Sum_probs=80.7

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeC-C-eEEEEEecCCCCCCCCCCCCCCCceEEE
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-A-EMIHLMELPNPDPLSGRPEHGGRDRHTC   85 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~-~-~~~~l~~~~~~~~~~~~~~~~~~~~hi~   85 (132)
                      ++.+++||.|.|+|++++++||+++|||++.....      ..+++... . ....+.....+         ..++.|++
T Consensus         1 ~i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~------~~~~~~~~~~~~~~~l~l~~~~---------~~~~~hia   65 (294)
T TIGR02295         1 NILRTGHVELRVTDLDKSREFYVDLLGFRETESDK------EYIYLRGIEEFQHHSLVLTKAP---------SAALSYIG   65 (294)
T ss_pred             CCceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC------CeEEEeccCcCCceEEEeeeCC---------CcCccEEE
Confidence            36799999999999999999999999999876532      23445432 1 12222221111         13578999


Q ss_pred             EEEC---CHHHHHHHHHhCCCeEEcc--CCCccEEEEeCCCCCeEEEEee
Q 032856           86 IAIR---DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        86 ~~v~---d~~~~~~~l~~~g~~~~~~--~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      |.|+   |+++++++|+++|+++...  +.+.+.+||+|||||.|||++.
T Consensus        66 f~v~~~~dl~~~~~~l~~~Gv~v~~~~~~~~~~~~~~~DPdG~~iEl~~~  115 (294)
T TIGR02295        66 FRVSKEEDLDKAADFFQKLGHPVRLVRDGGQPEALRVEDPFGYPIEFYFE  115 (294)
T ss_pred             EEeCCHHHHHHHHHHHHhcCCcEEeecCCCCceEEEEECCCCCEEEEEEc
Confidence            9997   7888999999999987653  3456899999999999999863

The enzyme from Bacillus brevis contains manganese.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.80  E-value=4.6e-18  Score=115.14  Aligned_cols=108  Identities=19%  Similarity=0.261  Sum_probs=79.9

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CC-eEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA-EMIHLMELPNPDPLSGRPEHGGRDRHTCI   86 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~-~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   86 (132)
                      +++++|+.|.|+|++++++||+++||+++..+..      ..+++.. ++ ....+.....         ...++.|++|
T Consensus         2 i~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~---------~~~g~~hiaf   66 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESLKHYTDVLGLEETGRDG------QRVYLKAWDEWDHYSVILTEA---------DTAGLDHMAF   66 (303)
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecC------ceEEEEeccccccceEeeccC---------CCCceeEEEE
Confidence            6789999999999999999999999999876533      1234443 21 1122221111         1245789999


Q ss_pred             EEC---CHHHHHHHHHhCCCeEEccC-----CCccEEEEeCCCCCeEEEEeeC
Q 032856           87 AIR---DVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        87 ~v~---d~~~~~~~l~~~g~~~~~~~-----~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      .|+   |+++++++|+++|+++...+     ..++.+||.||+||.|||.+..
T Consensus        67 ~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~~  119 (303)
T TIGR03211        67 KVESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAEK  119 (303)
T ss_pred             EeCCHHHHHHHHHHHHHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEcc
Confidence            998   78889999999999876432     3468899999999999999753

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=1.8e-17  Score=97.87  Aligned_cols=110  Identities=19%  Similarity=0.247  Sum_probs=77.3

Q ss_pred             EEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCC--CCCCCCCceEEEEEE---C
Q 032856           15 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAI---R   89 (132)
Q Consensus        15 v~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~hi~~~v---~   89 (132)
                      |.|.|+|++++.+||+++||+++.....     ...+++..++..++++..........  ....+.+..|+++.+   +
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADSN-----DGVAFFQLGGLVLALFPREELAKDAGVPVPPPGFSGITLAHNVRSEE   76 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccCC-----CceEEEEcCCeEEEEecchhhhhhcCCCCCCCCccceEEEEEcCCHH
Confidence            6899999999999999999999876511     13456666776777765432111000  111222334566665   5


Q ss_pred             CHHHHHHHHHhCCCeEEccC----CCccEEEEeCCCCCeEEEEe
Q 032856           90 DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        90 d~~~~~~~l~~~g~~~~~~~----~~~~~~~~~Dp~G~~iel~~  129 (132)
                      |++++++++++.|+++...+    .+++.++++||+||+|||..
T Consensus        77 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          77 EVDAVLARAAAAGATIVKPPQDVFWGGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             HHHHHHHHHHhCCCEEecCCccCCCCceEEEEECCCCCEEEEee
Confidence            89999999999999886432    35789999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.77  E-value=2.7e-18  Score=100.14  Aligned_cols=93  Identities=26%  Similarity=0.400  Sum_probs=76.6

Q ss_pred             eeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCceEEEEEECC
Q 032856           13 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD   90 (132)
Q Consensus        13 ~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d   90 (132)
                      +||+|.|+|+++|++||+++||+.+......+....+.+++..++  ..++|++..++.....  ..+.+++|+||.|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~~~~~~~~--~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPLDGDSPLD--RGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEESSTTCHHH--HTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeCCCCcccc--cCCCCEEEEEEEeCC
Confidence            699999999999999999999999877666556667788888877  4889998777652211  256889999999999


Q ss_pred             HHHHHHHHHhCCCeEEc
Q 032856           91 VSKLKMILDKAGISYTL  107 (132)
Q Consensus        91 ~~~~~~~l~~~g~~~~~  107 (132)
                      ++++.++|+++|+++..
T Consensus        79 ~d~~~~~l~~~G~~~~~   95 (109)
T PF13669_consen   79 LDAAIARLEAQGFRVLD   95 (109)
T ss_dssp             HHHHHHHHHHTTECEEE
T ss_pred             HHHHHHHHHHCCCEEcc
Confidence            99999999999998754

>PLN02300 lactoylglutathione lyase

Probab=99.77  E-value=2.9e-17  Score=110.46  Aligned_cols=120  Identities=21%  Similarity=0.241  Sum_probs=86.1

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCe----EEEEEecCCCCCCCCCCCCCCCceE
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRH   83 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~h   83 (132)
                      ...++.|+.|.|+|++++.+||+++|||+.......+...+..+++..++.    .+++.....    ...+..+.+..|
T Consensus       151 ~~~~~~~~~l~~~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~----~~~~~~g~~~~~  226 (286)
T PLN02300        151 TPEPLCQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYG----VTEYTKGNAYAQ  226 (286)
T ss_pred             CCCcceeEEEEeCCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCCCccEEEEeecCC----CCccccCCceeE
Confidence            345789999999999999999999999998764433333444555544221    233322111    112223456779


Q ss_pred             EEEEECCHHHHHHHHHhCCCeEEccC---CC--ccEEEEeCCCCCeEEEEeeC
Q 032856           84 TCIAIRDVSKLKMILDKAGISYTLSK---SG--RPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        84 i~~~v~d~~~~~~~l~~~g~~~~~~~---~~--~~~~~~~Dp~G~~iel~~~~  131 (132)
                      ++|.|+|+++++++++++|+++..++   ++  .+.++|.||+|+.++|++..
T Consensus       227 i~~~v~di~~~~~~~~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~  279 (286)
T PLN02300        227 IAIGTDDVYKTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNI  279 (286)
T ss_pred             EEEecCCHHHHHHHHHHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccc
Confidence            99999999999999999999887543   22  47889999999999999864

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.74  E-value=1.6e-16  Score=95.04  Aligned_cols=122  Identities=18%  Similarity=0.288  Sum_probs=84.1

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCC----CCCCCC-CCceE
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS----GRPEHG-GRDRH   83 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~-~~~~h   83 (132)
                      +.++.|+.+.+++.-+...||..+||.+.....+.+..+.. +|+......+++...-+..+.+    ...+.. .+..|
T Consensus        40 ytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~-v~~~~~~~~~ELthn~Gtes~~~~~~~ngN~~prGfgH  118 (170)
T KOG2944|consen   40 YTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVS-VFVFSRNAKLELTHNWGTESPPDQAYLNGNKEPRGFGH  118 (170)
T ss_pred             hhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCc-eEEecccCceeeecCCCCCCCcchhhcCCCCCCCccce
Confidence            34566666666666666777777677765555444433333 6667766667775544433322    122333 48899


Q ss_pred             EEEEECCHHHHHHHHHhCCCeEEccCC-C--ccEEEEeCCCCCeEEEEeeC
Q 032856           84 TCIAIRDVSKLKMILDKAGISYTLSKS-G--RPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        84 i~~~v~d~~~~~~~l~~~g~~~~~~~~-~--~~~~~~~Dp~G~~iel~~~~  131 (132)
                      |||.|+|++++.++|+++|+++...+. |  ...+|+.||||+.||+....
T Consensus       119 Ici~V~di~sac~~lkekGV~f~Kk~~dGk~K~iaF~~dpDgywiei~~~s  169 (170)
T KOG2944|consen  119 ICIEVDDINSACERLKEKGVRFKKKLKDGKMKPIAFLHDPDGYWIEIELES  169 (170)
T ss_pred             EEEEeCCHHHHHHHHHHhCceeeecCCCccccceeEEECCCCCeEEEeecC
Confidence            999999999999999999999876543 2  35789999999999998654

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.73  E-value=2.8e-16  Score=101.90  Aligned_cols=115  Identities=24%  Similarity=0.376  Sum_probs=88.4

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCe-EEEEEecCCCCCCCCCCCCCCCceEEEE
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTCI   86 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~hi~~   86 (132)
                      .-+.+..+.|.|+|++.++.||++++|+++..+..      ..+-+..++. .+.|.+..+...   .+....++.|++|
T Consensus         7 ~~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~------~~v~L~vgg~~LL~L~q~~~a~~---~~~~~aGLyH~Af   77 (265)
T COG2514           7 TPTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETD------GSVTLGVGGTPLLTLEQFPDARR---PPPRAAGLYHTAF   77 (265)
T ss_pred             CCcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccC------ceEEEeeCCEEEEEEEeCCCCCC---CCccccceeeeee
Confidence            34678999999999999999999999999998766      3455777776 333333333221   1234477899999


Q ss_pred             EEC---CHHHHHHHHHhCCCeEE--ccCCCccEEEEeCCCCCeEEEEeeC
Q 032856           87 AIR---DVSKLKMILDKAGISYT--LSKSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        87 ~v~---d~~~~~~~l~~~g~~~~--~~~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      .++   |+..+..++.+.|+.+.  .++..+.++||.||+||-||++...
T Consensus        78 LlP~r~~L~~~l~hl~~~~~~l~Ga~DH~vSEAlYl~DPEGNGIEiYaDr  127 (265)
T COG2514          78 LLPTREDLARVLNHLAEEGIPLVGASDHLVSEALYLEDPEGNGIEIYADR  127 (265)
T ss_pred             ecCCHHHHHHHHHHHHhcCCcccccCcchhheeeeecCCCCCeEEEEecC
Confidence            999   67777889999999985  2445789999999999999998753

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.68  E-value=1.4e-15  Score=86.38  Aligned_cols=112  Identities=26%  Similarity=0.436  Sum_probs=76.4

Q ss_pred             eeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCC---CCC-CCCCCceEEE-
Q 032856           11 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS---GRP-EHGGRDRHTC-   85 (132)
Q Consensus        11 ~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~-~~~~~~~hi~-   85 (132)
                      .+-|++|.|+|++++++||.++||++...+.+        .|+..+-.-++++....+....   ++- +..--+.|++ 
T Consensus         4 ~~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd--------~wvdfDfyGHQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfGv   75 (138)
T COG3565           4 VPFHLAIPVNDLDETRRFYGEVLGCKEGRSTD--------TWVDFDFYGHQVVAHLTPQPDSQGSGKVDGHGVPPPHFGV   75 (138)
T ss_pred             cceEEeeeccccHHHHhhhhhhcccccccccc--------eEEEeeecccEEEEEecCCcccccCcccCCCCCCCccceE
Confidence            46799999999999999999999999887655        3444433323333333222111   111 1122234555 


Q ss_pred             -EEECCHHHHHHHHHhCCCeEEccC--------CCccEEEEeCCCCCeEEEEee
Q 032856           86 -IAIRDVSKLKMILDKAGISYTLSK--------SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        86 -~~v~d~~~~~~~l~~~g~~~~~~~--------~~~~~~~~~Dp~G~~iel~~~  130 (132)
                       +.++|.-++.+||+++|+.+..+|        ...+.+|+.||.||.+|+...
T Consensus        76 Vl~~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~f  129 (138)
T COG3565          76 VLPVEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGF  129 (138)
T ss_pred             EEEHHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeecc
Confidence             455699999999999999875433        457899999999999998754

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.67  E-value=1.1e-14  Score=85.62  Aligned_cols=116  Identities=16%  Similarity=0.138  Sum_probs=81.4

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCC-eEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCI   86 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   86 (132)
                      +...+.|..|.|.|++++++||.++|||........  .....+.+..++ ...-.+.....     ... +.....+.|
T Consensus         6 ~~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~--~~~~y~~f~~~~~~~gG~l~~~~~-----~~p-~~~~~~iy~   77 (127)
T COG3324           6 EKGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDM--GEMRYAVFPADGAGAGGGLMARPG-----SPP-GGGGWVIYF   77 (127)
T ss_pred             cCCccEEEeeecCCHHHHHHHHHHhhCceecccccC--CCceEEEEECCCccccceeccCCc-----CCC-CCCCEEEEE
Confidence            345688999999999999999999999998875332  112333333332 11111111111     111 133457889


Q ss_pred             EECCHHHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEeeC
Q 032856           87 AIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        87 ~v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      .|+|+++..+|..++|.++..+    +++++.+.+.||+||+|.|.+..
T Consensus        78 ~v~did~~l~rv~~~GG~V~~p~~~~p~~G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          78 AVDDIDATLERVVAAGGKVLRPKTEFPGGGRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             ecCChHHHHHHHHhcCCeEEecccccCCceEEEEEECCCCCEEEEeecC
Confidence            9999999999999999988754    34789999999999999998754

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.59  E-value=3e-14  Score=90.67  Aligned_cols=100  Identities=17%  Similarity=0.150  Sum_probs=71.0

Q ss_pred             eeeeeeEEEEeC--CHHHHHHHHHhhcCCeeeccCCCCC--CCceeEEEEeCC--eEEEEEecCCCCCC--CC---CCCC
Q 032856            9 VVSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDK--LPYRGAWLWVGA--EMIHLMELPNPDPL--SG---RPEH   77 (132)
Q Consensus         9 ~~~~~hv~i~v~--d~~~~~~fy~~~lg~~~~~~~~~~~--~~~~~~~~~~~~--~~~~l~~~~~~~~~--~~---~~~~   77 (132)
                      +.+++||++.|+  |++++.+||+++|||+.........  .+.....+..++  ..+.|.....+...  ..   ....
T Consensus         1 ~~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~~~~~s~~~~fl~~~~   80 (191)
T cd07250           1 LTRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPASGKRKSQIQEFLEYYG   80 (191)
T ss_pred             CceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCCCCCccHHHHHHHHhC
Confidence            368999999999  9999999999999999877544322  333445555533  45556554432111  00   1123


Q ss_pred             CCCceEEEEEECCHHHHHHHHHhCCCeEEcc
Q 032856           78 GGRDRHTCIAIRDVSKLKMILDKAGISYTLS  108 (132)
Q Consensus        78 ~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~  108 (132)
                      +.|+.|+||.|+|+++++++|+++|+++...
T Consensus        81 G~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~  111 (191)
T cd07250          81 GAGVQHIALATDDIFATVAALRARGVEFLPI  111 (191)
T ss_pred             CCceeEEEEECCCHHHHHHHHHHcCCeeccC
Confidence            5788999999999999999999999988543

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=99.58  E-value=8.1e-14  Score=80.46  Aligned_cols=119  Identities=19%  Similarity=0.218  Sum_probs=80.9

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCC---CCCCCCceEEEE
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR---PEHGGRDRHTCI   86 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~hi~~   86 (132)
                      +.+..|+|+|+|++++++||.. ||++.......+.   ..+.+..++.-..|...........+   ......-.-+|+
T Consensus         2 ~~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde~---a~~mi~~~ni~vMLL~~~~fq~F~~~~i~dt~~s~evli~l   77 (133)
T COG3607           2 TQMIFVNLPVKDLEASKAFYTA-LGFKFNPQFSDED---AACMIISDNIFVMLLEEARFQTFTKRQIADTTKSREVLISL   77 (133)
T ss_pred             ceEEEEecchhhHHHHHHHHHH-hCcccCCCccccc---ceeEEEeccEEEEEeccHHhhhhcccccccccCCceEEEEe
Confidence            3567899999999999999998 8999877654333   33444445545555543333222111   122334456888


Q ss_pred             EEC---CHHHHHHHHHhCCCeEEccC---CCccEEEEeCCCCCeEEEEeeCC
Q 032856           87 AIR---DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVDG  132 (132)
Q Consensus        87 ~v~---d~~~~~~~l~~~g~~~~~~~---~~~~~~~~~Dp~G~~iel~~~~~  132 (132)
                      .+.   +++++.++..++|.+...++   ......-|.|||||.||+..+++
T Consensus        78 s~~s~eevd~~v~ka~eaGGk~~~~~~d~gfMYg~~fqDpDGh~wE~l~m~~  129 (133)
T COG3607          78 SAGSREEVDELVDKALEAGGKPANEPQDEGFMYGRSFQDPDGHVWEFLWMDP  129 (133)
T ss_pred             ccCcHHHHHHHHHHHHHcCCCCCCCccccccccceeeeCCCCCeEEEEEeCH
Confidence            887   56777899999999874433   34567789999999999988763

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.48  E-value=1.4e-12  Score=90.16  Aligned_cols=103  Identities=17%  Similarity=0.202  Sum_probs=71.4

Q ss_pred             CceeeeeeeEEEEeC--CHHHHHHHHHhhcCCeeeccCCCC--CCCceeEEEEe--CCeEEEEEecCCCCCCC--C---C
Q 032856            6 DYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARPHD--KLPYRGAWLWV--GAEMIHLMELPNPDPLS--G---R   74 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~--d~~~~~~fy~~~lg~~~~~~~~~~--~~~~~~~~~~~--~~~~~~l~~~~~~~~~~--~---~   74 (132)
                      .+.+.+++||++.|.  |++++..||+++|||+.....+..  ..+.....+..  ++..+.|.+........  .   .
T Consensus       153 ~~~~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~~g~~~i~L~ep~~~~~~s~i~~fl~  232 (353)
T TIGR01263       153 GVGLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASPDGKVKIPLNEPASGKDKSQIEEFLE  232 (353)
T ss_pred             CCCeEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECCCCcEEEEEeccCCCCCCCHHHHHHH
Confidence            356889999999999  999999999999999887543321  12222223332  33466665532221111  1   1


Q ss_pred             CCCCCCceEEEEEECCHHHHHHHHHhCCCeEEcc
Q 032856           75 PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS  108 (132)
Q Consensus        75 ~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~  108 (132)
                      ...+.|+.||||.|+|+++++++|+++|+++...
T Consensus       233 ~~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~  266 (353)
T TIGR01263       233 FYNGAGVQHIALNTDDIVRTVRALRARGVEFLDT  266 (353)
T ss_pred             HcCCCCccEEEEEcCCHHHHHHHHHHcCCccCcC
Confidence            1235788999999999999999999999987643

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.47  E-value=9.7e-12  Score=74.37  Aligned_cols=108  Identities=18%  Similarity=0.133  Sum_probs=74.7

Q ss_pred             EEEEe-CCHHHHHHHHHhhcCCeeeccCCC----------CCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceE
Q 032856           15 VGILC-ENLERSLEFYQNILGLEINEARPH----------DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRH   83 (132)
Q Consensus        15 v~i~v-~d~~~~~~fy~~~lg~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~h   83 (132)
                      ..|.+ .|.++|.+||+++||+++......          .......+.+.+++..+.+.........     ..+...+
T Consensus         3 p~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~l~~~d~~~~~~~-----~~~~~~~   77 (128)
T cd06588           3 PYLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGGQRLMASDGGPGFPF-----TFGNGIS   77 (128)
T ss_pred             eEEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECCEEEEEEcCCCCCCC-----CCCCCEE
Confidence            35667 899999999999999998765431          1122345667778877766654332211     1233457


Q ss_pred             EEEEECC---HHHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEE
Q 032856           84 TCIAIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  128 (132)
Q Consensus        84 i~~~v~d---~~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~  128 (132)
                      +++.|+|   +++++++|.+.| ++..+    +.+.+..+++||+|+.|+|.
T Consensus        78 l~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          78 LSVECDSEEEADRLFEALSEGG-TVLMPLQKTFWSPLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             EEEECCCHHHHHHHHHHHhcCC-eEeccchhcCcccccEEEECCCCCEEEeC
Confidence            8999986   667788987777 54432    35778999999999999873

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.46  E-value=6.6e-13  Score=84.85  Aligned_cols=119  Identities=18%  Similarity=0.200  Sum_probs=94.3

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCC-----------CCceeEEEEeCCeEEEEEecCCCCCCCCCCCC
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEH   77 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~   77 (132)
                      -.++-|+++.|.|.++++.||+++||+++....+.+.           ..+.-+++..|...-|++.....+.....+..
T Consensus        15 ~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYNYgV~~Yel   94 (299)
T KOG2943|consen   15 TRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYNYGVSKYEL   94 (299)
T ss_pred             chheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEeccCccceec
Confidence            3578899999999999999999999999987555443           44556667778777777777777777778888


Q ss_pred             CCCceEEEEEECCHHHHHHHHHhCCCeEEccCCCccEEEEeCCCCCeEEEEeeC
Q 032856           78 GGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        78 ~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      +++..|+++.++|+-...+.++..|.+    ..+.-.++++||||+.|+|.+..
T Consensus        95 Gndfg~i~I~s~dv~~~ve~v~~p~~~----~~g~~~~~v~dPdGykF~l~~~~  144 (299)
T KOG2943|consen   95 GNDFGGITIASDDVFSKVEKVNAPGGK----GSGCGIAFVKDPDGYKFYLIDRG  144 (299)
T ss_pred             cCCcccEEEeHHHHHHHHHHhcCcCCc----ccceEEEEEECCCCcEEEEeccC
Confidence            888999999999988888877776542    22445678999999999998643

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.46  E-value=4.9e-12  Score=87.54  Aligned_cols=97  Identities=12%  Similarity=0.109  Sum_probs=71.3

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCC--CCCCCCceEEEEE
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR--PEHGGRDRHTCIA   87 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~hi~~~   87 (132)
                      ++++||.|.|+|++++.+||.+.||++.......... ...+.++.|+..+.+............  ..++.++.|+||.
T Consensus         1 ~~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~-~~~~~~~~G~~~l~L~~~~~~~s~~~~~~~~hg~gv~~iaf~   79 (353)
T TIGR01263         1 DGFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHRE-KASHVLRQGQINFVLTAPYSSDSPAADFAAKHGDGVKDVAFR   79 (353)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCc-eeEEEEEeCCEEEEEecCCCCCchHHHHHHhCCCceEEEEEE
Confidence            4689999999999999999999999998875221111 133345667777777765443321111  1346778999999


Q ss_pred             ECCHHHHHHHHHhCCCeEEc
Q 032856           88 IRDVSKLKMILDKAGISYTL  107 (132)
Q Consensus        88 v~d~~~~~~~l~~~g~~~~~  107 (132)
                      |+|++++++++.++|+++..
T Consensus        80 V~Dv~~a~~~l~~~Ga~~v~   99 (353)
T TIGR01263        80 VDDAAAAFEAAVERGAEPVQ   99 (353)
T ss_pred             ECCHHHHHHHHHHCCCEecc
Confidence            99999999999999998754

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=99.41  E-value=1e-12  Score=77.92  Aligned_cols=120  Identities=22%  Similarity=0.351  Sum_probs=72.2

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCce-eEEEEeCCe--EEEEEecCC------CCCCCCC--CCC-
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYR-GAWLWVGAE--MIHLMELPN------PDPLSGR--PEH-   77 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~-~~~~~~~~~--~~~l~~~~~------~~~~~~~--~~~-   77 (132)
                      ++++||+|.|+|++++++||+++||++............. ...+.....  .........      .......  ... 
T Consensus         1 ~~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (138)
T COG0346           1 MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPG   80 (138)
T ss_pred             CceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecC
Confidence            4789999999999999999999999999886553322110 111111110  001100000      0000000  011 


Q ss_pred             C-CCceEEEEEECC---HHHHHHHHHhCCCeEEccC--CCccEEEEeCCCCCeEEEEe
Q 032856           78 G-GRDRHTCIAIRD---VSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        78 ~-~~~~hi~~~v~d---~~~~~~~l~~~g~~~~~~~--~~~~~~~~~Dp~G~~iel~~  129 (132)
                      . .+..|+++.+++   ...........|..+....  .....+|+.||||+.||+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          81 GDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRGGVHVYFRDPDGILIELAT  138 (138)
T ss_pred             chhccCceeEecccccccceEEEeeCCCCCEEEeecCCCcceEEEEECCCCcEEEeeC
Confidence            1 246789999998   6666677777788765432  12228999999999999974

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.36  E-value=1.5e-10  Score=69.28  Aligned_cols=113  Identities=19%  Similarity=0.167  Sum_probs=83.0

Q ss_pred             EEEEeC-CHHHHHHHHHhhcCCeeeccCCCCC----------CCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceE
Q 032856           15 VGILCE-NLERSLEFYQNILGLEINEARPHDK----------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRH   83 (132)
Q Consensus        15 v~i~v~-d~~~~~~fy~~~lg~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~h   83 (132)
                      -.|..+ |.++|.+||+++||.+.........          .....+-+.+++..+.+........   ....++....
T Consensus         4 PYl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g~~im~sd~~~~~~---~~~~~~~s~~   80 (136)
T COG2764           4 PYLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGGSTIMLSDAFPDMG---ATEGGGTSLS   80 (136)
T ss_pred             eEEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEECCEEEEEecCCCccC---cccCCCeeEE
Confidence            356778 9999999999999999887666444          3455666788877666654333221   1111223346


Q ss_pred             EEEEECCHHHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEee
Q 032856           84 TCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        84 i~~~v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      +.+.++|++.+++++.+.|+++..+    ..+.+...++||.|+.|-|...
T Consensus        81 l~~~~~d~da~f~~a~~aGa~v~mpl~~~fwG~r~G~v~D~fGv~W~l~~~  131 (136)
T COG2764          81 LDLYVEDVDAVFERAAAAGATVVMPLEDTFWGDRYGQVTDPFGVVWMLNTP  131 (136)
T ss_pred             EEEEehHHHHHHHHHHhcCCeEEecchhcCcccceEEEECCCCCEEEEecC
Confidence            7788889999999999999887654    3588999999999999998764

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=99.32  E-value=2.1e-11  Score=84.81  Aligned_cols=100  Identities=12%  Similarity=0.080  Sum_probs=73.2

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCC-----CCceeEEEEeCC--eEEEEEecCCC---CCCCCC---
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----LPYRGAWLWVGA--EMIHLMELPNP---DPLSGR---   74 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~l~~~~~~---~~~~~~---   74 (132)
                      .+.+++||++.|.+++.+..||+++|||+.....+.+.     .+..+..+..++  ..+.|.++...   .+....   
T Consensus       177 gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~g~v~ipLnEP~~~~~~~SqI~eFL~  256 (398)
T PLN02875        177 GLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNNEMVLLPLNEPTFGTKRKSQIQTYLE  256 (398)
T ss_pred             CcceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCCCcEEEEeccCCCCCCCcChHHHHHH
Confidence            47799999999999999999999999998876444322     223555566644  45666665432   111111   


Q ss_pred             CCCCCCceEEEEEECCHHHHHHHHHhC----CCeEEc
Q 032856           75 PEHGGRDRHTCIAIRDVSKLKMILDKA----GISYTL  107 (132)
Q Consensus        75 ~~~~~~~~hi~~~v~d~~~~~~~l~~~----g~~~~~  107 (132)
                      ...+.|+.||||.|+|+.++.++|+++    |+++..
T Consensus       257 ~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~  293 (398)
T PLN02875        257 HNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMP  293 (398)
T ss_pred             hcCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCC
Confidence            133578999999999999999999999    998765

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=99.26  E-value=1.4e-10  Score=78.64  Aligned_cols=105  Identities=16%  Similarity=0.178  Sum_probs=68.9

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEEC
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR   89 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~   89 (132)
                      -+..||+|.|+|+++|++||+++|++.. ...+  .   ..+ +  ++. +..+....++.      ....-.-+|+.++
T Consensus       246 ~~~IfVNLpV~DL~rS~~FYt~LF~~n~-Fsde--~---a~c-m--~dt-I~vMllt~~D~------~~~~evLl~Ls~~  309 (357)
T PRK01037        246 PKTFSVVLEVQDLRRAKKFYSKMFGLEC-WDGD--K---LFL-L--GKT-SLYLQQTKAEK------KNRGTTTLSLELE  309 (357)
T ss_pred             CceEEEEeeeCCHHHHHHHHHHHhCCCC-CCCC--c---ccc-c--cCc-EEEEEecCCCC------CCcceEEEEeccC
Confidence            3567999999999999999999988885 3322  1   111 1  333 22222222211      1123345899998


Q ss_pred             ---CHHHHHHHHHhCCCeEEccC-CCccEEEEeCCCCCeEEEEee
Q 032856           90 ---DVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        90 ---d~~~~~~~l~~~g~~~~~~~-~~~~~~~~~Dp~G~~iel~~~  130 (132)
                         +++++.++..++|.+....+ +.+..--|.||||+.||++..
T Consensus       310 Sre~VD~lv~~A~aaGG~~~~~~~D~Gf~rsf~D~DGH~WEi~~~  354 (357)
T PRK01037        310 CEHDFVRFLRRWEMLGGELGEQADGHFPLRLVFDLDGHIWVVSCV  354 (357)
T ss_pred             CHHHHHHHHHHHHHcCCCCCCCcccccCcceeECCCCCEEEEEEE
Confidence               46666888889998654332 333477899999999999864

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.21  E-value=2.7e-10  Score=74.38  Aligned_cols=100  Identities=21%  Similarity=0.228  Sum_probs=72.8

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCC-CCCCCceEEE
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRP-EHGGRDRHTC   85 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~hi~   85 (132)
                      +.-+.|+||.|.|.|+++|.+||++.|||+...+.+      ...|+..|++++|+..-.......... ....++..+.
T Consensus       164 p~~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~~~------~A~F~a~G~YHHHia~N~W~s~~~~~~~~~~~GLa~~~  237 (265)
T COG2514         164 PAGTIIGHVHLKVADLEEAEQFYEDVLGLEVTARGP------SALFLASGDYHHHLAANTWNSRGARPRNANASGLAWLE  237 (265)
T ss_pred             CCCcEEeEEEEEeCCHHHHHHHHHHhcCCeeeecCC------cceEEecCCcceeEEEeccccCCCCCCCCCCCCcceEE
Confidence            446789999999999999999999999999998733      457788899988887655544333332 3456778888


Q ss_pred             EEECCHHHHHHHHHhCCCeEEccCCCccEEEEeCCCCCeEEEE
Q 032856           86 IAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  128 (132)
Q Consensus        86 ~~v~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~Dp~G~~iel~  128 (132)
                      +.+++-..........                +||.|+.+.+.
T Consensus       238 i~~~~~~~l~~~~~~~----------------~Dp~G~~i~~~  264 (265)
T COG2514         238 IHTPDPEKLDATGTRL----------------TDPWGIVIRVV  264 (265)
T ss_pred             EEcCCcccccccccce----------------ecCCCceEEEe
Confidence            8888744432211111                89999988874

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=99.11  E-value=3.9e-10  Score=70.92  Aligned_cols=93  Identities=19%  Similarity=0.307  Sum_probs=59.1

Q ss_pred             eeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCC--CCC------CCCCCceE
Q 032856           12 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS--GRP------EHGGRDRH   83 (132)
Q Consensus        12 ~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~------~~~~~~~h   83 (132)
                      |+|+.+.|+|++++.++|.+.|||.+.........+...+.+.+++..++++.........  ...      ..+.++..
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~~YlEli~i~~~~~~~~~~~~~~~~~~~~~~g~~~   80 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGDGYLELIAIDPEAPAPDRGRWFGLDRLAGGEGLYG   80 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SSSEEEEEEES-HHHSTGGGT-TTTHHHHT--EEEE
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCCceEEEEEeCCcccccccccceechhhcCCCCeEE
Confidence            6899999999999999998889999988777666677777778877799998864332211  111      24678889


Q ss_pred             EEEEECCHHHHHHHHHhCCCe
Q 032856           84 TCIAIRDVSKLKMILDKAGIS  104 (132)
Q Consensus        84 i~~~v~d~~~~~~~l~~~g~~  104 (132)
                      +|+.++|+++..++|++.|+.
T Consensus        81 ~~l~t~d~~~~~~~l~~~G~~  101 (175)
T PF13468_consen   81 WALRTDDIEAVAARLRAAGLD  101 (175)
T ss_dssp             EEEE-S-HHHHHHHHHTTT-E
T ss_pred             EEEecCCHHHHHHHHHhcCCC
Confidence            999999999999999999985

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=99.03  E-value=2e-09  Score=71.77  Aligned_cols=103  Identities=16%  Similarity=0.153  Sum_probs=71.6

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCc--eeEEEEeCCeEEEEEecCCCCCCC---CCCCCCCCc
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY--RGAWLWVGAEMIHLMELPNPDPLS---GRPEHGGRD   81 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~   81 (132)
                      -.+.+++||.+.|.|...+..||+..|||++...........  ....++.|.....+...-++....   ....++.++
T Consensus        13 g~~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g~~vFv~~s~~~p~~~~~G~~l~~Hgdgv   92 (381)
T KOG0638|consen   13 GKFLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQGKIVFVFNSAYNPDNSEYGDHLVKHGDGV   92 (381)
T ss_pred             cceeeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcCCEEEEEecCCCCCchhhhhhhhhcccch
Confidence            568899999999999999999999999999987553222111  112234444333333333332211   122456677


Q ss_pred             eEEEEEECCHHHHHHHHHhCCCeEEccC
Q 032856           82 RHTCIAIRDVSKLKMILDKAGISYTLSK  109 (132)
Q Consensus        82 ~hi~~~v~d~~~~~~~l~~~g~~~~~~~  109 (132)
                      .-+||+|+|++++.+.+.++|+++..++
T Consensus        93 kdvafeVeD~da~~~~~va~Ga~v~~~p  120 (381)
T KOG0638|consen   93 KDVAFEVEDADAIFQEAVANGAKVVRPP  120 (381)
T ss_pred             hceEEEecchHHHHHHHHHcCCcccCCc
Confidence            8899999999999999999999886554

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.95  E-value=1.5e-07  Score=54.49  Aligned_cols=110  Identities=18%  Similarity=0.193  Sum_probs=62.2

Q ss_pred             eeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCceEEEEEECC
Q 032856           13 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD   90 (132)
Q Consensus        13 ~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d   90 (132)
                      .+-+|.|+|-+...+||++.|||+...+..      ..+++....  .++.|-+.+..  ....-.....+.++.+.|++
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~~~~erlvlEESP~~--rtr~V~G~KKl~~ivIkv~~   73 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQQKEERLVLEESPSM--RTRAVEGPKKLNRIVIKVPN   73 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-TT--EEEEEEE--TT--T-B--SSS-SEEEEEEEESS
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCCCCceEEEEecCCcc--ccccccCcceeeEEEEEcCC
Confidence            466899999999999999999999987643      334444432  24444443332  21122333557889999998


Q ss_pred             HHHHHHHHHhCCCeEE--ccCCCccEEEEeCCCCCeEEEEeeC
Q 032856           91 VSKLKMILDKAGISYT--LSKSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        91 ~~~~~~~l~~~g~~~~--~~~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      ..++.+ |.++|.++.  -....++.|-..+|+|+.|.+...+
T Consensus        74 ~~EIe~-LLar~~~~~~l~kg~~gyAfe~vSPEgd~~llhaEd  115 (125)
T PF14506_consen   74 PKEIEA-LLARGAQYDRLYKGKNGYAFEAVSPEGDRFLLHAED  115 (125)
T ss_dssp             HHHHHH-HHHC-S--SEEEE-SSSEEEEEE-TT--EEEEE--S
T ss_pred             HHHHHH-HHhcccccceeEEcCCceEEEEECCCCCEEEEEEcC
Confidence            766544 344454432  2233567888899999999987654

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=98.92  E-value=1.3e-08  Score=65.48  Aligned_cols=112  Identities=21%  Similarity=0.296  Sum_probs=72.8

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIA   87 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   87 (132)
                      -.+..|.+.|.|+++++.||+++||+++......    ...+.+..++.  .++|....+..    ....+.+-..+++-
T Consensus       148 ~pv~~V~l~VgdL~ks~kyw~~~lgM~ilekeek----~t~~~mgYgd~q~~LElt~~~~~i----d~~kg~griafaip  219 (299)
T KOG2943|consen  148 DPVLQVMLNVGDLQKSIKYWEKLLGMKILEKEEK----YTRARMGYGDEQCVLELTYNYDVI----DRAKGFGRIAFAIP  219 (299)
T ss_pred             CCeEEEEEEehhHHHHHHHHHHHhCcchhhhhhh----hhhhhhccCCcceEEEEEeccCcc----cccccceeEEEecc
Confidence            4578899999999999999999999999874221    12334555554  44444433322    12222223334444


Q ss_pred             ECCHHHHHHHHHhCCCeEE----c--cC--CCccEEEEeCCCCCeEEEEe
Q 032856           88 IRDVSKLKMILDKAGISYT----L--SK--SGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        88 v~d~~~~~~~l~~~g~~~~----~--~~--~~~~~~~~~Dp~G~~iel~~  129 (132)
                      .+++..+.+.+++.+-++.    .  .|  -..+.+.+.||||+.+.|+-
T Consensus       220 ~d~~~~l~e~iK~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVd  269 (299)
T KOG2943|consen  220 TDDLPKLQEAIKSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVD  269 (299)
T ss_pred             ccccccHHHHHHHhccccccceeeccCCCcceeEEEEEECCCCceEEEec
Confidence            5588888888888754442    1  22  24578899999999999874

>PRK10148 hypothetical protein; Provisional

Probab=98.87  E-value=6.8e-07  Score=54.70  Aligned_cols=109  Identities=13%  Similarity=0.002  Sum_probs=69.9

Q ss_pred             EEEEeC-CHHHHHHHHHhhcCCeeeccCC---C-----------------CCCCceeEEEEeCCeEEEEEecCCCCCCCC
Q 032856           15 VGILCE-NLERSLEFYQNILGLEINEARP---H-----------------DKLPYRGAWLWVGAEMIHLMELPNPDPLSG   73 (132)
Q Consensus        15 v~i~v~-d~~~~~~fy~~~lg~~~~~~~~---~-----------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~   73 (132)
                      ..|..+ |.++|.+||+++||.+......   .                 .......+.+.+++..+.+.......    
T Consensus         5 pyL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~g~~lm~sD~~~~~----   80 (147)
T PRK10148          5 PYLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIAGSDIMMSDAIPSG----   80 (147)
T ss_pred             EEEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEECCEEEEEECCCCCc----
Confidence            345564 8999999999999988754321   0                 11233456677887655543321111    


Q ss_pred             CCCCCCCceEEEEEECCHHH---HHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEee
Q 032856           74 RPEHGGRDRHTCIAIRDVSK---LKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        74 ~~~~~~~~~hi~~~v~d~~~---~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                       .. .....++++.++|.++   ++++| +.|.++..+    ..+.+...++||.|+.|.|...
T Consensus        81 -~~-~~~~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~wg~~~g~v~D~fGi~W~l~~~  141 (147)
T PRK10148         81 -KA-HYSGFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVV  141 (147)
T ss_pred             -CC-CCCeEEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcchhhccEEEECCCCCEEEEEec
Confidence             11 1124578888888877   45555 467766543    3567888999999999998754

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.80  E-value=2.9e-07  Score=64.48  Aligned_cols=119  Identities=14%  Similarity=0.126  Sum_probs=77.8

Q ss_pred             eeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCC--CceeEEEEeCCeEEEEEecCCCCC------------CC---CC
Q 032856           12 VHHVGILCENLERSLEFYQNILGLEINEARPHDKL--PYRGAWLWVGAEMIHLMELPNPDP------------LS---GR   74 (132)
Q Consensus        12 ~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~------------~~---~~   74 (132)
                      ++||.+.|.|..++..||+..|||...........  ......++.|+..+.+.....+..            .+   ..
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~g~i~fv~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRSGDLVFLFTAPYSPKIGAGDDDPASTAPHPSFSSD   80 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEEeCCEEEEEeCCCCCccccccccccccccccccCcH
Confidence            58999999999999999999999988765442111  122334555665655555432210            00   00


Q ss_pred             ------CCCCCCceEEEEEECCHHHHHHHHHhCCCeEEccCCC---------ccEEEEeCCCCCeEEEEee
Q 032856           75 ------PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSG---------RPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        75 ------~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~~~---------~~~~~~~Dp~G~~iel~~~  130 (132)
                            ..++.++.-++|+|+|.+++++++.++|.+....+.+         ....-+.-++|..+-|++.
T Consensus        81 ~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVdr  151 (398)
T PLN02875         81 AARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVSY  151 (398)
T ss_pred             HHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEcc
Confidence                  1346778899999999999999999999886543211         1233355566666666553

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=98.79  E-value=5.8e-08  Score=58.49  Aligned_cols=119  Identities=12%  Similarity=0.084  Sum_probs=74.2

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCC--CCCCCCCce
Q 032856            5 GDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDR   82 (132)
Q Consensus         5 ~~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~   82 (132)
                      +++.+.++.||.+.|.|.+++..+++ .|||+...+....    .+..++-|+..+.|-..  +.....  ...++.++.
T Consensus         3 nP~g~~G~dFvEFa~~~~~~l~~~~~-~lGF~~~a~hrsk----~v~l~rQG~I~~vln~e--p~s~a~~~~~~HG~sv~   75 (139)
T PF14696_consen    3 NPLGLDGFDFVEFAVPDAQALAQLFT-ALGFQPVARHRSK----DVTLYRQGDINFVLNSE--PDSFAAEFAAQHGPSVC   75 (139)
T ss_dssp             -TT-EEEEEEEEEE-SSTTSCHHHHC-CCCEEEECCECCC----SEEEEEETTEEEEEEEE--STSCHHHHHHHHSSEEE
T ss_pred             CCCCCCCeEEEEEecCCHHHHHHHHH-HhCcceEEecCCc----ceEEEEeCCEEEEEeCC--CcchHHHHHHhcCCEEE
Confidence            46788999999999999888888875 5999998865422    23445667766666432  221111  113467788


Q ss_pred             EEEEEECCHHHHHHHHHhCCCeEEccC---CCccEEEEeCCCCCeEEEEee
Q 032856           83 HTCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        83 hi~~~v~d~~~~~~~l~~~g~~~~~~~---~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      -++|.|+|.++++++..++|.+....+   .....--++.++|.++-|++.
T Consensus        76 aiafrV~Da~~A~~rA~~~GA~~~~~~~~~~e~~~paI~g~G~sl~yfVdr  126 (139)
T PF14696_consen   76 AIAFRVDDAAAAYERAVALGAEPVQEPTGPGELNIPAIRGIGGSLHYFVDR  126 (139)
T ss_dssp             EEEEEES-HHHHHHHHHHTT--EEEEEEETT-BEEEEEE-CCC-EEEEEE-
T ss_pred             EEEEEeCCHHHHHHHHHHcCCcCcccCCCCCcEeeeeEEccCCCEEEEEec
Confidence            999999999999999999999865432   222333555566666655553

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.72  E-value=1e-07  Score=64.60  Aligned_cols=101  Identities=15%  Similarity=0.217  Sum_probs=68.8

Q ss_pred             ceeeeeeeEEEEe--CCHHHHHHHHHhhcCCeeeccCCC--CCCCceeEEEEeCCeEEEE--EecCCCCCCCC---CCCC
Q 032856            7 YGVVSVHHVGILC--ENLERSLEFYQNILGLEINEARPH--DKLPYRGAWLWVGAEMIHL--MELPNPDPLSG---RPEH   77 (132)
Q Consensus         7 ~~~~~~~hv~i~v--~d~~~~~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~---~~~~   77 (132)
                      ..+..++|++..|  ..++.+..||+++|+|+.....+-  +..+..+-.+......+.|  -...+..+...   ....
T Consensus       163 ~g~~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~Sp~G~vrlplN~s~~~~sqi~efl~~y~  242 (363)
T COG3185         163 VGLTAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVSPCGKVRLPLNESADDKSQIGEFLREYR  242 (363)
T ss_pred             cCceeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEecCCCcEEeecccCCCchhHHHHHHHHhC
Confidence            3457899999887  599999999999999998765443  3333333334333333333  22222222111   1135


Q ss_pred             CCCceEEEEEECCHHHHHHHHHhCCCeEEc
Q 032856           78 GGRDRHTCIAIRDVSKLKMILDKAGISYTL  107 (132)
Q Consensus        78 ~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~  107 (132)
                      +.|+.||+|.++|+-++.++++++|+++..
T Consensus       243 G~GIQHIA~~T~dI~~tv~~lr~rG~~fl~  272 (363)
T COG3185         243 GEGIQHIAFGTDDIYATVAALRERGVKFLP  272 (363)
T ss_pred             CCcceEEEecccHHHHHHHHHHHcCCccCC
Confidence            788999999999999999999999998754

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=98.07  E-value=0.00043  Score=40.69  Aligned_cols=96  Identities=19%  Similarity=0.099  Sum_probs=58.6

Q ss_pred             CCHHHHHHHHHhhcCCee-eccCCC------CCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECCHH
Q 032856           20 ENLERSLEFYQNILGLEI-NEARPH------DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS   92 (132)
Q Consensus        20 ~d~~~~~~fy~~~lg~~~-~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~~   92 (132)
                      .+.+.|.+||.++||-.. ......      .......+.+.+++..+.........    ..   +.-.++++.++|.+
T Consensus        11 g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~g~~lm~~D~~~~~----~~---~~~~sl~i~~~~~e   83 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIGGQKLMASDGGPDF----PF---GNNISLCIECDDEE   83 (116)
T ss_dssp             S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEETTEEEEEEEESTS-----------TTEEEEEEESSHH
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEECCeEEEEECCCCCC----CC---CCcEEEEEEcCCHH
Confidence            689999999999998432 221111      12233456678888777665544111    11   22367888888776


Q ss_pred             HH---HHHHHhCCCeEEccCCCccEEEEeCCCCCeEEEE
Q 032856           93 KL---KMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  128 (132)
Q Consensus        93 ~~---~~~l~~~g~~~~~~~~~~~~~~~~Dp~G~~iel~  128 (132)
                      ++   .++|.+.|-     + ......++|..|..|.|+
T Consensus        84 e~~~~f~~Ls~gG~-----~-~~~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   84 EIDRIFDKLSEGGQ-----W-FSRYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHHHHTTTE-----T-CCEEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHHHcCCC-----c-cceeEEEEeCCCCEEEeC
Confidence            65   667766665     3 336779999999999875

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.05  E-value=0.00019  Score=49.25  Aligned_cols=110  Identities=14%  Similarity=0.108  Sum_probs=73.5

Q ss_pred             CceeeeeeeEEEEeCCH-HHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCC--CCCCCCCce
Q 032856            6 DYGVVSVHHVGILCENL-ERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDR   82 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d~-~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~   82 (132)
                      ++...++.+|.+.|.|. ++...++.. |||.........    ....++-|+..  ++....+.+...  ...++.+..
T Consensus        17 P~~~~GfeFvEf~~~d~~~~l~~l~~~-lGF~~~~~Hrsk----~v~l~rQGdin--lvvn~~~~s~a~~f~~~Hgps~~   89 (363)
T COG3185          17 PEGTDGFEFVEFAVPDPQEALGALLGQ-LGFTAVAKHRSK----AVTLYRQGDIN--LVVNAEPDSFAAEFLDKHGPSAC   89 (363)
T ss_pred             CCCCCceeEEEEecCCHHHHHHHHHHH-hCcccccccccc----ceeEEEeCCEE--EEEcCCCcchhhHHHHhcCCchh
Confidence            45578999999999999 566666655 999887654422    12223446544  443333332211  224567778


Q ss_pred             EEEEEECCHHHHHHHHHhCCCeEEccC-------------CCccEEEEeCCCC
Q 032856           83 HTCIAIRDVSKLKMILDKAGISYTLSK-------------SGRPAIFTRDPDA  122 (132)
Q Consensus        83 hi~~~v~d~~~~~~~l~~~g~~~~~~~-------------~~~~~~~~~Dp~G  122 (132)
                      -++|.|+|.+.++++.+++|.+....+             .++..+||-|..|
T Consensus        90 a~a~~V~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~~  142 (363)
T COG3185          90 AMAFRVDDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRYG  142 (363)
T ss_pred             eeEEeeCCHHHHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccCC
Confidence            899999999999999999998542211             2577889988883

>PF15067 FAM124: FAM124 family

Probab=97.96  E-value=0.00021  Score=46.32  Aligned_cols=103  Identities=19%  Similarity=0.260  Sum_probs=61.5

Q ss_pred             eeeeEEEEeC--CHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe---CCeEEEEEecCCCCCCCCCCCCCCCceEEE
Q 032856           11 SVHHVGILCE--NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV---GAEMIHLMELPNPDPLSGRPEHGGRDRHTC   85 (132)
Q Consensus        11 ~~~hv~i~v~--d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~   85 (132)
                      .+-.++|.|+  |.+.+++||+-+|+-++.....      ..+++.+   .+..+.+....-+...  .+. ...-.-+.
T Consensus       128 EilRftly~~~~N~~d~vr~Yelil~~~~~~~k~------~FC~F~lys~~~~~iQlsLK~lp~~~--~p~-p~esavLq  198 (236)
T PF15067_consen  128 EILRFTLYCSFDNYEDMVRFYELILQREPTQQKE------DFCFFTLYSQPGLDIQLSLKQLPPGM--SPE-PTESAVLQ  198 (236)
T ss_pred             cEEEEEEEecCCCHHHHHHHHHHHhccCcceeeC------CcEEEEEecCCCeEEEEEeccCCCCC--Ccc-cccceEEE
Confidence            4667888998  9999999999999999877654      2233333   2334444442221111  111 11224489


Q ss_pred             EEECCHHHHHHHHHhCCCeEEccCCCccEEEEeCCCCCeEEE
Q 032856           86 IAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEF  127 (132)
Q Consensus        86 ~~v~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~Dp~G~~iel  127 (132)
                      |.|.|+.++..-|-.--.++....     --.+|||||.|=|
T Consensus       199 F~V~~igqLvpLLPnpc~PIS~~r-----WqT~D~DGNkILL  235 (236)
T PF15067_consen  199 FRVEDIGQLVPLLPNPCSPISETR-----WQTEDYDGNKILL  235 (236)
T ss_pred             EEecchhhhcccCCCCcccccCCc-----ceeeCCCCCEecc
Confidence            999999887654332222222222     2458999998743

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=97.87  E-value=1.5e-05  Score=53.74  Aligned_cols=103  Identities=17%  Similarity=0.111  Sum_probs=69.6

Q ss_pred             ceeeeeeeEEEEeC--CHHHHHHHHHhhcCCeeeccCCCCCCCc-----eeEEEEeCCeEEEEEecCCCCCCCC------
Q 032856            7 YGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDKLPY-----RGAWLWVGAEMIHLMELPNPDPLSG------   73 (132)
Q Consensus         7 ~~~~~~~hv~i~v~--d~~~~~~fy~~~lg~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~------   73 (132)
                      +.+..++|++..++  .++.+.+||.+.|||...+..+......     +.+.+...+..+.+......+....      
T Consensus       174 ~~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~te~SaLrs~vlan~~esi~mpinEp~~G~k~ksQIqe  253 (381)
T KOG0638|consen  174 GGLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHTEYSALRSIVLANYEESIKMPINEPAPGKKKKSQIQE  253 (381)
T ss_pred             cceeehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhhHHHHHHHHHHhcCCccEEEeccCCCCCCccHHHHHH
Confidence            56789999999998  7889999999999999888766433221     1111222233333222111111111      


Q ss_pred             --CCCCCCCceEEEEEECCHHHHHHHHHhCCCeEEccC
Q 032856           74 --RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK  109 (132)
Q Consensus        74 --~~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~  109 (132)
                        .+..+.|+.|+++.++|+-++.+.++++|.++..+|
T Consensus       254 yv~y~gG~GvQHiaL~tedIi~Ai~~lr~rG~eFLs~P  291 (381)
T KOG0638|consen  254 YVEYHGGAGVQHIALNTEDIIEAIRGLRARGGEFLSPP  291 (381)
T ss_pred             HHHhcCCCceeeeeecchHHHHHHHHHHhcCCccccCC
Confidence              124578899999999999999999999999986443

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=97.31  E-value=0.0014  Score=37.79  Aligned_cols=50  Identities=18%  Similarity=0.125  Sum_probs=38.9

Q ss_pred             eEEEEEECCHHHHHHHHHh-CCCeEEc----cCCCccEEEEeCCCC-CeEEEEeeC
Q 032856           82 RHTCIAIRDVSKLKMILDK-AGISYTL----SKSGRPAIFTRDPDA-NALEFTQVD  131 (132)
Q Consensus        82 ~hi~~~v~d~~~~~~~l~~-~g~~~~~----~~~~~~~~~~~Dp~G-~~iel~~~~  131 (132)
                      +|++|.|+|++++.+.+.+ .|+....    .+.+.+..++..++| ..|||+++.
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~   56 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPL   56 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEES
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeC
Confidence            5999999999999999998 8986542    233456677888888 689999864

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=96.97  E-value=0.0012  Score=37.51  Aligned_cols=91  Identities=19%  Similarity=0.254  Sum_probs=42.3

Q ss_pred             eeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEEC-
Q 032856           11 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-   89 (132)
Q Consensus        11 ~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~-   89 (132)
                      .+..+.|.|.| +++++||+++|+-...                   ..+.+.+..+++... .+...=.+..+-|.|+ 
T Consensus         5 ~~e~i~LNV~d-~~~~~fy~~~f~~~~~-------------------~~l~f~ea~G~DL~~-~~~~twDLe~Lkf~V~~   63 (101)
T PF14507_consen    5 EFESIELNVPD-AKSQSFYQSIFGGQLP-------------------FFLTFQEAQGPDLTI-ENNETWDLEMLKFQVPK   63 (101)
T ss_dssp             EE-EEEEEE-T--T---S--H---HHHT-------------------TTEEEEE---CCGSS--TTSBSSEEEEEEEES-
T ss_pred             EEEEEEEeCCC-hhHHHHHHhccccCCC-------------------ceEEEeeccCCcccc-CCCcEEeeEEEEEEecC
Confidence            45678999999 8899999998862221                   123333333332211 1111233567888998 


Q ss_pred             --CHHHHHHHHHhCCCeEEccCCCccEEEEeCCCCCeE
Q 032856           90 --DVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANAL  125 (132)
Q Consensus        90 --d~~~~~~~l~~~g~~~~~~~~~~~~~~~~Dp~G~~i  125 (132)
                        |+.++.++|.+.++  - .+...+.+...||.|..+
T Consensus        64 ~~Dl~~L~~~le~~~~--f-idKk~k~l~~~Dps~IEl   98 (101)
T PF14507_consen   64 DFDLAALKSHLEEQEF--F-IDKKEKFLVTSDPSQIEL   98 (101)
T ss_dssp             S--HHHHHHHTTTS-E--E---TT-SEEEEE-TTS-EE
T ss_pred             cccHHHHHHHhcccce--E-ecCCceEEEEECCcceEE
Confidence              78888889888333  2 223456788899998754

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=96.55  E-value=0.018  Score=35.47  Aligned_cols=53  Identities=15%  Similarity=0.174  Sum_probs=37.4

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEe
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME   64 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~   64 (132)
                      ++++||.|.|+|+.++..-+++ .|.+.....+.... -..+|+.. +++.+++..
T Consensus       114 rGfgHIci~V~di~sac~~lke-kGV~f~Kk~~dGk~-K~iaF~~dpDgywiei~~  167 (170)
T KOG2944|consen  114 RGFGHICIEVDDINSACERLKE-KGVRFKKKLKDGKM-KPIAFLHDPDGYWIEIEL  167 (170)
T ss_pred             CccceEEEEeCCHHHHHHHHHH-hCceeeecCCCccc-cceeEEECCCCCeEEEee
Confidence            6899999999999999999988 79996665443332 23444444 445666543

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=96.43  E-value=0.024  Score=33.98  Aligned_cols=54  Identities=15%  Similarity=0.231  Sum_probs=36.7

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEe
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME   64 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~   64 (132)
                      .++.|+++.|.|++++.+...+ .|.+..........+.+.+++.- ++..++|++
T Consensus        86 ~g~~hia~~v~d~d~~~~~l~~-~G~~~~~~~~~~~~~~r~~~~~DPdG~~iEl~e  140 (142)
T cd08353          86 LGLRRVMFAVDDIDARVARLRK-HGAELVGEVVQYENSYRLCYIRGPEGILIELAE  140 (142)
T ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCceeCCceecCCCeEEEEEECCCCCEEEeee
Confidence            4688999999999999999988 69887764322222334455554 344566654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=95.75  E-value=0.096  Score=30.44  Aligned_cols=46  Identities=17%  Similarity=0.287  Sum_probs=31.9

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCC-CCCCCceeEEEEeC
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARP-HDKLPYRGAWLWVG   56 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~-~~~~~~~~~~~~~~   56 (132)
                      .++.|+++.|.|++++.+..++ .|.++..... ....+....++..+
T Consensus        71 ~g~~h~~f~v~d~~~~~~~l~~-~G~~~~~~~~~~~~~g~~~~~~d~~  117 (128)
T cd07249          71 EGLHHIAFEVDDIDAALARLKA-QGVRLLQEGPRIGAGGKRVAFLHPK  117 (128)
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-CCCeeeccCCCccCCCCEEEEEecC
Confidence            5678999999999999999988 6888766433 22333344444444

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>PLN02367 lactoylglutathione lyase

Probab=95.72  E-value=0.11  Score=34.43  Aligned_cols=56  Identities=18%  Similarity=0.273  Sum_probs=39.9

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEecCC
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPN   67 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~   67 (132)
                      .+++||+|.|.|++++.+-.++ .|.+....... ......+|+.- ++..++|++...
T Consensus       168 ~G~~HIaf~VdDVdaa~erL~a-~Gv~~v~~P~~-g~~~riaFIkDPDGn~IEL~e~~~  224 (233)
T PLN02367        168 RGFGHIGITVDDVYKACERFEE-LGVEFVKKPND-GKMKGIAFIKDPDGYWIEIFDLKT  224 (233)
T ss_pred             CCceEEEEEcCCHHHHHHHHHH-CCCEEEeCCcc-CCceEEEEEECCCCCEEEEEeccc
Confidence            4799999999999999999987 89988753321 11124455544 566888877544

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=95.69  E-value=0.14  Score=29.52  Aligned_cols=50  Identities=18%  Similarity=0.071  Sum_probs=35.6

Q ss_pred             CceEEEEEECCHHHHHHHHHh-CCCeEEccC---C-CccEEEEeCCCCCeEEEEe
Q 032856           80 RDRHTCIAIRDVSKLKMILDK-AGISYTLSK---S-GRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~---~-~~~~~~~~Dp~G~~iel~~  129 (132)
                      ++.|+++.|+|++++.+.+++ .|+.+....   . ..+.+.+..+++..+++..
T Consensus         3 ~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~   57 (125)
T cd08352           3 GIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFS   57 (125)
T ss_pred             ccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEE
Confidence            578999999999999999985 899875431   1 2233445555667777764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PRK11478 putative lyase; Provisional

Probab=95.60  E-value=0.17  Score=29.64  Aligned_cols=53  Identities=8%  Similarity=0.154  Sum_probs=33.9

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEE
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLM   63 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~   63 (132)
                      .++.|+++.|.|++++.+-..+ .|.+..........+...+|+.- ++..++++
T Consensus        74 ~g~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iEl~  127 (129)
T PRK11478         74 CGLRHLAFSVDDIDAAVAHLES-HNVKCEAIRVDPYTQKRFTFFNDPDGLPLELY  127 (129)
T ss_pred             CceeEEEEEeCCHHHHHHHHHH-cCCeeeccccCCCCCCEEEEEECCCCCEEEEE
Confidence            4578999999999999998877 79887543222222334444443 34455554

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=95.59  E-value=0.16  Score=30.34  Aligned_cols=58  Identities=12%  Similarity=0.015  Sum_probs=42.5

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEecCCC
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNP   68 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~   68 (132)
                      .++.|+++.|.|++++.+-.++ .|.++.........+.+.++++- ++..+++++....
T Consensus        68 ~g~~hia~~V~Dvda~~~~l~~-~G~~v~~~p~~~~~~~~~~~i~dp~G~~ie~~~~~~~  126 (136)
T cd08342          68 DGVCDVAFRVDDAAAAYERAVA-RGAKPVQEPVEEPGELKIAAIKGYGDSLHTLVDRKGY  126 (136)
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-cCCeEccCceecCCeEEEEEEeccCCcEEEEEecCCC
Confidence            4688999999999999999888 79998765443234445666555 4568888876554

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=95.59  E-value=0.12  Score=32.03  Aligned_cols=53  Identities=13%  Similarity=0.130  Sum_probs=37.7

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEEcc-----C----C--------C-----ccEEEEeCCCCCeEEEEeeC
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS-----K----S--------G-----RPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~-----~----~--------~-----~~~~~~~Dp~G~~iel~~~~  131 (132)
                      .++.|+++.|.|++...+..++ .|.+....     .    .        +     ....++..++|..+|+++..
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~   78 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFK   78 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEecc
Confidence            4579999999999999999977 79865310     0    0        0     23345565677889998864

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=95.47  E-value=0.12  Score=31.87  Aligned_cols=50  Identities=10%  Similarity=0.120  Sum_probs=34.4

Q ss_pred             CceEEEEEECCHHHHHHHHHh-CCCeEEccCCCccEEEEeC--CCCCeEEEEee
Q 032856           80 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRD--PDANALEFTQV  130 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~D--p~G~~iel~~~  130 (132)
                      |+.|+++.|.|+++..+.+.+ .|.+......+. ..++..  ..+..++|.+.
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~~~-~~~~~~~~~~~~~l~l~~~   53 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEGDR-VRLEEGGGGPGAVVDVLEE   53 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeCCE-EEEEecCCCCCCEEEEEeC
Confidence            478999999999999999976 698875433322 222232  24677887664

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=94.99  E-value=0.21  Score=29.17  Aligned_cols=50  Identities=14%  Similarity=0.164  Sum_probs=33.4

Q ss_pred             CceEEEEEECCHHHHHHHHHhC----CCeEEccCCCccEEEEeCCCCCeEEEEee
Q 032856           80 RDRHTCIAIRDVSKLKMILDKA----GISYTLSKSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~~----g~~~~~~~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      ++.|+.+.|+|++++.+.+.+.    |.+......+ ...|+...++..+++.+.
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~~-~~~~~~~~~~~~i~l~~~   54 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWED-GRSWRAGDGGTYLVLQQA   54 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeecc-CceEEecCCceEEEEEec
Confidence            3689999999999999988875    8887554322 223333234566666643

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=94.99  E-value=0.19  Score=29.15  Aligned_cols=46  Identities=15%  Similarity=0.193  Sum_probs=29.8

Q ss_pred             ceEEEEEECCHHHHHHHHHhCCCeEEccCCCccEEEEeCCCCCeEE
Q 032856           81 DRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALE  126 (132)
Q Consensus        81 ~~hi~~~v~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~Dp~G~~ie  126 (132)
                      +.|+++.|+|+++..+..+..|.+..........+.+.-++|..+.
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~LGf~~~~~~~~~~~~~~~~~~~~~l~   46 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRRLGFDFPEEADDEPHVEAVLPGGVRLA   46 (122)
T ss_pred             CceEEEEeccHHHHHHHHHHhCceecCCcCCCCcEEEEeCCCEEEE
Confidence            4689999999999999998889876433221123334444444443

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=94.93  E-value=0.2  Score=28.14  Aligned_cols=50  Identities=12%  Similarity=0.149  Sum_probs=33.8

Q ss_pred             ceEEEEEECCHHHHHHHHH-hCCCeEEccCC-CccEEEEeCCCCCeEEEEee
Q 032856           81 DRHTCIAIRDVSKLKMILD-KAGISYTLSKS-GRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        81 ~~hi~~~v~d~~~~~~~l~-~~g~~~~~~~~-~~~~~~~~Dp~G~~iel~~~  130 (132)
                      +.|+++.|+|++++.+.+. -.|.+....+. .....++..+++..++|...
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~i~l~~~   52 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLFPGAWLYAGDGPQLHLIEE   52 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCCCceEEEeCCCcEEEEEec
Confidence            4699999999999999887 57887654322 12334555555556777654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=94.89  E-value=0.072  Score=33.44  Aligned_cols=50  Identities=24%  Similarity=0.310  Sum_probs=27.2

Q ss_pred             ceEEEEEECCHHHHHHHH-HhCCCeEEcc---CC-CccEEEEeCCCCCeEEEEeeC
Q 032856           81 DRHTCIAIRDVSKLKMIL-DKAGISYTLS---KS-GRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        81 ~~hi~~~v~d~~~~~~~l-~~~g~~~~~~---~~-~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      +.|+.+.|+|++++.+++ ++.|.++..+   +. |.....+.=++| .+||+...
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~~-YlEli~i~   55 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGDG-YLELIAID   55 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SSS-EEEEEEES
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCCc-eEEEEEeC
Confidence            479999999999999999 8889987653   22 333333333667 99998754

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=94.81  E-value=0.24  Score=28.56  Aligned_cols=51  Identities=18%  Similarity=0.228  Sum_probs=35.6

Q ss_pred             CceEEEEEECCHHHHHHHHHh-CCCeEEccC---C--CccEEEEeCC---CCCeEEEEee
Q 032856           80 RDRHTCIAIRDVSKLKMILDK-AGISYTLSK---S--GRPAIFTRDP---DANALEFTQV  130 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~---~--~~~~~~~~Dp---~G~~iel~~~  130 (132)
                      ++.|+++.|+|++++.+.+++ .|.+.....   .  .....++...   .|..++|.+.
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   60 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEW   60 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEec
Confidence            368999999999999999986 798765321   1  1234455554   5667887754

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>PF13670 PepSY_2: Peptidase propeptide and YPEB domain This Prosite motif covers only the active site

Probab=94.78  E-value=0.17  Score=27.73  Aligned_cols=40  Identities=18%  Similarity=0.225  Sum_probs=33.5

Q ss_pred             CHHHHHHHHHhCCCeEEc---cCCCccEEEEeCCCCCeEEEEe
Q 032856           90 DVSKLKMILDKAGISYTL---SKSGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        90 d~~~~~~~l~~~g~~~~~---~~~~~~~~~~~Dp~G~~iel~~  129 (132)
                      +.+++.+.+++.|+++..   ..++.+.+...|.+|+.+|+.=
T Consensus        30 ~~~~~~~~l~~~G~~v~~ve~~~~g~yev~~~~~dG~~~ev~v   72 (83)
T PF13670_consen   30 SIEQAVAKLEAQGYQVREVEFDDDGCYEVEARDKDGKKVEVYV   72 (83)
T ss_pred             CHHHHHHHHHhcCCceEEEEEcCCCEEEEEEEECCCCEEEEEE
Confidence            789999999999997643   2456789999999999999864

This is family M4 in the peptidase classification.

>PRK10291 glyoxalase I; Provisional

Probab=94.57  E-value=0.5  Score=27.76  Aligned_cols=57  Identities=16%  Similarity=0.132  Sum_probs=38.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccC-CCCCCCceeEEEEe-CCeEEEEEecCC
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEAR-PHDKLPYRGAWLWV-GAEMIHLMELPN   67 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~-~~~~~~~~~~~~~~-~~~~~~l~~~~~   67 (132)
                      .++.|+++.|.|++++.+-.++ .|.++.... +........+|+.- ++..++|++...
T Consensus        64 ~~~~hlaf~V~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~  122 (129)
T PRK10291         64 TAYGHIALSVDNAAEACEKIRQ-NGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  122 (129)
T ss_pred             CCeeEEEEEeCCHHHHHHHHHH-cCCccccCCcccCCCceEEEEEECCCCCEEEEEEccc
Confidence            3688999999999999888877 788776432 22222223344444 566888887654

>PF06185 YecM: YecM protein; InterPro: IPR010393 This family consists of several bacterial YecM proteins of unknown function

Probab=94.57  E-value=0.69  Score=29.51  Aligned_cols=76  Identities=18%  Similarity=0.106  Sum_probs=41.4

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEE------EEeCCeEEEEEecCCCCCCCCCCCCCCCceE
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAW------LWVGAEMIHLMELPNPDPLSGRPEHGGRDRH   83 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~h   83 (132)
                      -.++||+++|++.+.|.+|-+..+..-..-..- .--+-..+.      +..++..+.+++-+-+..  +.+. ..|.-|
T Consensus        33 ~~~DHialRvn~~~~A~~~~~~l~~~G~llSen-~INGRPI~l~~L~qPL~~~~~~I~~vELP~P~~--K~Yp-~eGWEH  108 (185)
T PF06185_consen   33 YEIDHIALRVNSNETAERWKQALLQCGELLSEN-MINGRPICLFKLNQPLQFGGWSIDCVELPYPKD--KRYP-QEGWEH  108 (185)
T ss_dssp             -EEEEEEEE-S-HHHHHHHHHHHTTTEEEEEEE-EETTEEEEEEEEEEEEEETTEEEEEEEEE---S--S--S-S-EEEE
T ss_pred             cCCcEEEEecCCHHHHHHHHHHHHHhChhhhhc-eeCCeeEEEEEcCCchhcCCeeEEEEEeCCCCC--CCCC-CCCceE
Confidence            468999999999999999999988764332111 001111122      344566777777655433  2222 267899


Q ss_pred             EEEEEC
Q 032856           84 TCIAIR   89 (132)
Q Consensus        84 i~~~v~   89 (132)
                      |.+.++
T Consensus       109 IE~Vip  114 (185)
T PF06185_consen  109 IEFVIP  114 (185)
T ss_dssp             EEEE--
T ss_pred             EEEEec
Confidence            999998

; PDB: 1K4N_A.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=94.38  E-value=0.52  Score=27.76  Aligned_cols=50  Identities=12%  Similarity=0.167  Sum_probs=34.6

Q ss_pred             ceEEEEEECCHHHHHHHHHh-CCCeEEccCCCccEEEEeCC--CCCeEEEEee
Q 032856           81 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDP--DANALEFTQV  130 (132)
Q Consensus        81 ~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~Dp--~G~~iel~~~  130 (132)
                      +.|+.+.|+|+++..+.+.+ .|.+......+....|+..+  .+..+.+.+.
T Consensus         2 i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   54 (134)
T cd08348           2 LSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPLGGLVFLSRDPDEHHQIALITG   54 (134)
T ss_pred             eeEEEEEecCHHHHHHHHHHhcCCEEEeeccCCcEEEEEecCCCceEEEEEec
Confidence            68999999999999999987 89987654332234455443  2345666543

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=94.38  E-value=0.35  Score=30.88  Aligned_cols=56  Identities=20%  Similarity=0.299  Sum_probs=37.9

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEecCC
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPN   67 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~   67 (132)
                      .++.|++|.|.|++++.+.+.+ .|.+...... .......+|+.- ++..++|++..+
T Consensus       120 ~G~~Hlaf~V~Dvd~~~~~L~~-~Gv~v~~~p~-~~~~~~~~fi~DPdG~~IEl~e~~~  176 (185)
T PLN03042        120 RGFGHIGITVDDVYKACERFEK-LGVEFVKKPD-DGKMKGLAFIKDPDGYWIEIFDLKR  176 (185)
T ss_pred             CCccEEEEEcCCHHHHHHHHHH-CCCeEEeCCc-cCCceeEEEEECCCCCEEEEEECCC
Confidence            3799999999999999999988 7988764322 111223344433 456777776544

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=94.08  E-value=0.62  Score=26.81  Aligned_cols=50  Identities=20%  Similarity=0.251  Sum_probs=34.0

Q ss_pred             ceEEEEEECCHHHHHHHHHh-CCCeEEc----cCCCccEEEEeCCCCCeEEEEee
Q 032856           81 DRHTCIAIRDVSKLKMILDK-AGISYTL----SKSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        81 ~~hi~~~v~d~~~~~~~l~~-~g~~~~~----~~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      +.|+++.|+|+++..+.+.+ .|.+...    ...+....|+.-.+|..+++++.
T Consensus         2 ~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   56 (125)
T cd07241           2 IEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMTR   56 (125)
T ss_pred             ceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEcC
Confidence            57999999999999998887 6887532    11222333444345677888753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>COG3865 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=93.97  E-value=0.83  Score=27.89  Aligned_cols=98  Identities=13%  Similarity=0.089  Sum_probs=54.8

Q ss_pred             CCHHHHHHHHHhhcCCe-ee--ccCCCC-----CCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECCH
Q 032856           20 ENLERSLEFYQNILGLE-IN--EARPHD-----KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV   91 (132)
Q Consensus        20 ~d~~~~~~fy~~~lg~~-~~--~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~   91 (132)
                      .+.+.|.+||.++|.=. +.  .+.+.+     ....-.+.+++++..+..+........    ..+.. ..+-+.++|.
T Consensus        14 ~~AeeA~~fY~s~FpdS~i~~i~r~p~~~~~g~~G~Vl~a~F~l~g~~f~~ld~g~~~~f----~fneA-~S~~v~~~~q   88 (151)
T COG3865          14 GNAEEAMNFYLSTFPDSKIIGITRYPEGEPGGKEGKVLVAEFTLNGQSFMALDGGPNTSF----KFNEA-FSFQVACDDQ   88 (151)
T ss_pred             CcHHHHHHHHHHhCCcceeeeeeecCCCCCCCCCccEEEEEEEECCeEEEEEcCCCCcCC----CcCcc-EEEEEEcCCH
Confidence            89999999999998542 22  111111     222344556777765444432221111    11111 2344455554


Q ss_pred             ---HHHHHHHHhCCCeEEccCCCccEEEEeCCCCCeEEEE
Q 032856           92 ---SKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  128 (132)
Q Consensus        92 ---~~~~~~l~~~g~~~~~~~~~~~~~~~~Dp~G~~iel~  128 (132)
                         |.+.+.|.+.|.+      ...-.+++|-.|..|.|.
T Consensus        89 ~E~Drlwnal~~~g~e------~~~cgW~kDKfGVSWQi~  122 (151)
T COG3865          89 EEIDRLWNALSDNGGE------AEACGWLKDKFGVSWQIV  122 (151)
T ss_pred             HHHHHHHHHHhccCcc------hhcceeEecccCcEEEEc
Confidence               4456777777762      334468999999988875

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=93.79  E-value=0.71  Score=26.77  Aligned_cols=48  Identities=13%  Similarity=0.094  Sum_probs=31.9

Q ss_pred             CceEEEEEECCHHHHHHHHHh-CCCeEEccCCCccEEEEeCCC-CCeEEEE
Q 032856           80 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPD-ANALEFT  128 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~Dp~-G~~iel~  128 (132)
                      ++.|+++.|+|++++.+.+.+ .|.+....+.. ...++..++ +..+.+.
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~~l~   51 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDRPED-GALYLRMDDRAWRIAVH   51 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccCCCC-CeEEEEccCCceEEEEE
Confidence            468999999999999999977 79987554222 234454432 3344443

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>PRK11700 hypothetical protein; Provisional

Probab=93.70  E-value=1.1  Score=28.54  Aligned_cols=77  Identities=18%  Similarity=0.139  Sum_probs=47.1

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEE------EeCCeEEEEEecCCCCCCCCCCCCCCCce
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWL------WVGAEMIHLMELPNPDPLSGRPEHGGRDR   82 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~   82 (132)
                      --..+||.++|++.+.|.+|-+..+..-..-... .-.+-..+.+      ..++..+.+++.+-+..  +.+. ..|.-
T Consensus        37 ~~~~DHialR~n~~~tAe~w~~~l~~~G~llSen-~INGRPI~l~~L~qPl~~~~w~I~cvELP~P~~--k~Yp-~eGWE  112 (187)
T PRK11700         37 QLEADHIALRCNQNETAERWRQGFLQCGELLSEN-IINGRPICLFELDQPLQVGHWSIDCVELPYPGE--KRYP-HEGWE  112 (187)
T ss_pred             cccCcEEEEeeCCHHHHHHHHHHHHHhchhhhcc-ccCCeeEEEEEcCCCceeCCcEEEEEEeCCCCC--CCCC-CCCce
Confidence            3468999999999999999988877553322111 1111122223      33455666766554432  2222 25689


Q ss_pred             EEEEEEC
Q 032856           83 HTCIAIR   89 (132)
Q Consensus        83 hi~~~v~   89 (132)
                      ||.+.++
T Consensus       113 HIElVlp  119 (187)
T PRK11700        113 HIELVLP  119 (187)
T ss_pred             EEEEEec
Confidence            9999998

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=93.58  E-value=0.45  Score=26.31  Aligned_cols=48  Identities=15%  Similarity=0.214  Sum_probs=35.1

Q ss_pred             EEEEEECCHHHHHHHHHh-CCCeEEccCC--CccEEEEeCCCCCeEEEEeeC
Q 032856           83 HTCIAIRDVSKLKMILDK-AGISYTLSKS--GRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        83 hi~~~v~d~~~~~~~l~~-~g~~~~~~~~--~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      |+.+.|.|+++..+.+.+ .|.+......  .....++.++ +..++|.+.+
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~~   51 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNGGAEFAVLGLG-GTRLELFEGD   51 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccCCEEEEEEecC-CceEEEecCC
Confidence            789999999999999998 8998765442  2345555554 6777776643

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=93.56  E-value=0.8  Score=26.48  Aligned_cols=48  Identities=8%  Similarity=0.095  Sum_probs=33.0

Q ss_pred             CceEEEEEECCHHHHHHHHHh-CCCeEEccCCCccEEEEeCCC-CCeEEEEe
Q 032856           80 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPD-ANALEFTQ  129 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~Dp~-G~~iel~~  129 (132)
                      .+.|+.+.|+|+++..+.+.+ .|.++.....  ..+++...+ +..+.|.+
T Consensus         2 ~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~--~~~~l~~~~~~~~l~l~~   51 (125)
T cd07255           2 RIGAVTLRVADLERSLAFYQDVLGLEVLERTD--STAVLGTGGKRPLLVLEE   51 (125)
T ss_pred             EEEEEEEEECCHHHHHHHHHhccCcEEEEcCC--CEEEEecCCCeEEEEEEe
Confidence            368999999999999999986 7988765432  234444433 34555544

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=93.30  E-value=0.59  Score=26.71  Aligned_cols=28  Identities=11%  Similarity=0.199  Sum_probs=24.5

Q ss_pred             CceEEEEEECCHHHHHHHHHhCCCeEEc
Q 032856           80 RDRHTCIAIRDVSKLKMILDKAGISYTL  107 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~~g~~~~~  107 (132)
                      ++.|+++.|+|++++.+.+...|.+...
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~~lG~~~~~   29 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYEAFGLDVRE   29 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHHHhCCcEEe
Confidence            4789999999999999999888988754

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=93.09  E-value=0.84  Score=26.38  Aligned_cols=48  Identities=15%  Similarity=0.211  Sum_probs=31.4

Q ss_pred             ceEEEEEECCHHHHHHHHHh----CCCeEEccCCCccEEEEeCC-CCCeEEEEe
Q 032856           81 DRHTCIAIRDVSKLKMILDK----AGISYTLSKSGRPAIFTRDP-DANALEFTQ  129 (132)
Q Consensus        81 ~~hi~~~v~d~~~~~~~l~~----~g~~~~~~~~~~~~~~~~Dp-~G~~iel~~  129 (132)
                      +.|+++.|.|++++.+.+++    .|.+......+. .+.+..+ .+..+.+..
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~~~-~~~~~~~~~~~~~~l~~   53 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMEDGPG-AVGYGKGGGGPDFWVTK   53 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeecCCc-eeEeccCCCCceEEEec
Confidence            46999999999999988887    588765443222 2334444 245555544

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=93.02  E-value=0.52  Score=30.13  Aligned_cols=51  Identities=18%  Similarity=0.195  Sum_probs=38.0

Q ss_pred             CceEEEEEEC--CHHHHHHHHHh-CCCeEEcc---C---CCccEEEEeCCCC-CeEEEEee
Q 032856           80 RDRHTCIAIR--DVSKLKMILDK-AGISYTLS---K---SGRPAIFTRDPDA-NALEFTQV  130 (132)
Q Consensus        80 ~~~hi~~~v~--d~~~~~~~l~~-~g~~~~~~---~---~~~~~~~~~Dp~G-~~iel~~~  130 (132)
                      ++.|+++.|+  |++++.+.+++ .|.+....   +   .+.++.++..|+| ..++|.+.
T Consensus         3 ~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~   63 (191)
T cd07250           3 RIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEP   63 (191)
T ss_pred             eeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecC
Confidence            4789999999  99999999876 89876432   1   2455677788765 56788764

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=92.83  E-value=0.83  Score=26.46  Aligned_cols=30  Identities=23%  Similarity=0.512  Sum_probs=24.6

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeecc
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEA   40 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~   40 (132)
                      .++.|+++.|.|++++.+...+ .|.+...+
T Consensus        71 ~g~~~i~~~v~di~~~~~~l~~-~G~~~~~~  100 (128)
T TIGR03081        71 GGIHHIAIEVDDIEAALETLKE-KGVRLIDE  100 (128)
T ss_pred             CceEEEEEEcCCHHHHHHHHHH-CCCcccCC
Confidence            3677999999999999998877 68877653

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=92.72  E-value=0.83  Score=25.86  Aligned_cols=32  Identities=13%  Similarity=0.200  Sum_probs=26.7

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccC
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEAR   41 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~   41 (132)
                      ..+..|+.+.|.|++++.+...+ .|..+....
T Consensus        65 ~~~~~~~~~~v~di~~~~~~l~~-~g~~~~~~~   96 (119)
T cd07263          65 PGGTPGLVLATDDIDATYEELKA-RGVEFSEEP   96 (119)
T ss_pred             CCCceEEEEEehHHHHHHHHHHh-CCCEEeecc
Confidence            35688999999999999999887 798877644

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=92.53  E-value=1.1  Score=25.56  Aligned_cols=31  Identities=13%  Similarity=0.324  Sum_probs=25.8

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccC
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEAR   41 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~   41 (132)
                      .++.|+.+.|.|++++.+-..+ .|..+....
T Consensus        69 ~~~~~i~~~v~did~~~~~l~~-~G~~~~~~~   99 (121)
T cd07233          69 NGFGHLAFAVDDVYAACERLEE-MGVEVTKPP   99 (121)
T ss_pred             CCeEEEEEEeCCHHHHHHHHHH-CCCEEeeCC
Confidence            3678999999999999888877 788887643

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=92.52  E-value=1.1  Score=25.69  Aligned_cols=31  Identities=13%  Similarity=0.187  Sum_probs=26.0

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEEccC
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK  109 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~  109 (132)
                      .++.|+.+.|+|+++..+.+++ .|.+.....
T Consensus         2 ~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~   33 (125)
T cd07253           2 KRIDHVVLTVADIEATLDFYTRVLGMEVVRFG   33 (125)
T ss_pred             cccceEEEEecCHHHHHHHHHHHhCceeeccc
Confidence            3578999999999999999988 798876543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=92.49  E-value=0.66  Score=26.65  Aligned_cols=28  Identities=18%  Similarity=0.220  Sum_probs=24.3

Q ss_pred             CceEEEEEECCHHHHHHHHHh-CCCeEEc
Q 032856           80 RDRHTCIAIRDVSKLKMILDK-AGISYTL  107 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~  107 (132)
                      ++.|+++.|.|++++.+.+.+ .|.+...
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~   29 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVE   29 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEe
Confidence            368999999999999999987 7988754

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=91.77  E-value=0.83  Score=25.59  Aligned_cols=31  Identities=23%  Similarity=0.228  Sum_probs=26.1

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeecc
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEA   40 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~   40 (132)
                      -.+..|+.+.|.|++++.+.+.+ +|.+....
T Consensus        54 ~~~~~~~~~~v~dv~~~~~~l~~-~G~~~~~~   84 (108)
T PF12681_consen   54 PGGGFHLCFEVEDVDALYERLKE-LGAEIVTE   84 (108)
T ss_dssp             SSSEEEEEEEESHHHHHHHHHHH-TTSEEEEE
T ss_pred             CCceeEEEEEEcCHHHHHHHHHH-CCCeEeeC
Confidence            44678999999999999999988 79887653

...

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=91.03  E-value=2.3  Score=25.76  Aligned_cols=56  Identities=14%  Similarity=0.064  Sum_probs=37.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCC-CCCCCceeEEEEe-CCeEEEEEecC
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARP-HDKLPYRGAWLWV-GAEMIHLMELP   66 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~-~~~~~~~~~~~~~-~~~~~~l~~~~   66 (132)
                      .++.|+.+.|.|++++.+...+ .|.++..... .+......+|+.- .+..++++...
T Consensus        85 ~g~~hi~f~v~dld~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  142 (150)
T TIGR00068        85 NGFGHIAIGVDDVYKACERVRA-LGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRK  142 (150)
T ss_pred             CceeEEEEecCCHHHHHHHHHH-cCCccccCCcccCCCceEEEEEECCCCCEEEEEECC
Confidence            3688999999999999999988 7887664322 1222223444444 45677777644

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=91.03  E-value=1.8  Score=24.68  Aligned_cols=54  Identities=6%  Similarity=-0.181  Sum_probs=32.6

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEec
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMEL   65 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~   65 (132)
                      .++.|+++.|.|.++..+..+. +|.........+. +...+++.- ++..++++..
T Consensus        56 ~~~~~~af~v~~~~~~~~~~~~-~g~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          56 ARFVGAAFEAASRADLEKAAAL-PGASVIDDLEAPG-GGKRVTLTDPDGFPVELVYG  110 (113)
T ss_pred             CcccEEEEEECCHHHHHHHHHc-CCCeeecCCCCCC-CceEEEEECCCCCEEEEEec
Confidence            4688999999999988887554 7887654322111 122344433 4456666543

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=90.99  E-value=2  Score=24.93  Aligned_cols=26  Identities=12%  Similarity=0.280  Sum_probs=22.4

Q ss_pred             eEEEEEECCHHHHHHHHHhCCCeEEc
Q 032856           82 RHTCIAIRDVSKLKMILDKAGISYTL  107 (132)
Q Consensus        82 ~hi~~~v~d~~~~~~~l~~~g~~~~~  107 (132)
                      .++.+.|+|+++..+.+++.|.+...
T Consensus         2 ~~v~l~V~Dl~~s~~FY~~lGf~~~~   27 (124)
T cd09012           2 IFINLPVKDLEKSTAFYTALGFEFNP   27 (124)
T ss_pred             EEEEeecCCHHHHHHHHHHCCCEEcc
Confidence            56899999999999999888987653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=90.90  E-value=2.2  Score=25.28  Aligned_cols=50  Identities=16%  Similarity=0.178  Sum_probs=33.2

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEEccCCCccEEEEeCCC---CCeEEEEe
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPD---ANALEFTQ  129 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~Dp~---G~~iel~~  129 (132)
                      ..+.|+++.|+|+++..+.+++ .|.+...... ....|+...+   ...+.+..
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~-~~~~~~~~~~~~~~~~i~l~~   55 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK-GRGAFLRAAGGGDHHNLFLIK   55 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec-CcEEEEECCCCCCCcEEEEec
Confidence            4578999999999999999876 7988654322 2234554432   24555543

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=90.79  E-value=1.9  Score=24.44  Aligned_cols=39  Identities=10%  Similarity=0.167  Sum_probs=29.7

Q ss_pred             CceEEEEEECCHHHHHHHHHh-CCCeEEccCCCccEEEEeCC
Q 032856           80 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDP  120 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~Dp  120 (132)
                      .+.|+.+.|+|+++..+.+.+ .|.+......  ...++..+
T Consensus         2 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~--~~~~~~~~   41 (117)
T cd07240           2 RIAYAELEVPDLERALEFYTDVLGLTVLDRDA--GSVYLRCS   41 (117)
T ss_pred             ceeEEEEecCCHHHHHHHHHhccCcEEEeecC--CeEEEecC
Confidence            368999999999999999998 8998765432  24555554

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=90.01  E-value=2.3  Score=24.25  Aligned_cols=25  Identities=16%  Similarity=0.203  Sum_probs=21.4

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCCeeec
Q 032856           14 HVGILCENLERSLEFYQNILGLEINE   39 (132)
Q Consensus        14 hv~i~v~d~~~~~~fy~~~lg~~~~~   39 (132)
                      |+.+.|.|+++..+...+ .|.+...
T Consensus        69 ~~~~~v~did~~~~~l~~-~G~~~~~   93 (119)
T cd08359          69 ILNFEVDDVDAEYERLKA-EGLPIVL   93 (119)
T ss_pred             EEEEEECCHHHHHHHHHh-cCCCeee
Confidence            899999999999999888 6876654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PF02208 Sorb: Sorbin homologous domain; InterPro: IPR003127 Sorbin is an active peptide present in the digestive tract, where it has pro-absorptive and anti-secretory effects in different parts of the intestine, including the ability to decrease VIP (vasoactive intestinal peptide) and cholera toxin-induced secretion

Probab=89.91  E-value=0.11  Score=24.80  Aligned_cols=28  Identities=25%  Similarity=0.538  Sum_probs=22.1

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcC
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILG   34 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg   34 (132)
                      ..+.-++-.++.+++.++.++||+..|.
T Consensus         7 ~gigp~De~giP~~~vd~~kDWYktMFk   34 (47)
T PF02208_consen    7 EGIGPVDESGIPLSNVDRPKDWYKTMFK   34 (47)
T ss_pred             CCcCccccCCCccccccchhHHHHHHHH
Confidence            4445566778888999999999999764

It is expressed in some intestinal and pancreatic endocrine tumours in humans []. Sorbin-homology domains are found in adaptor proteins such as vinexin, CAP/ponsin and argBP2, which regulate various cellular functions, including cell adhesion, cytoskeletal organisation, and growth factor signalling []. In addition to the sorbin domain, these proteins contain three SH3 (src homology 3) domains. The sorbin homology domain mediates the interaction of vinexin and CAP with flotillin, which is crucial for the localisation of SH3-binding proteins to the lipid raft, a region of the plasma membrane rich in cholesterol and sphingolipids that acts to concentrate certain signalling molecules. The sorbin homology domain of adaptor proteins may mediate interactions with the lipid raft that are crucial to intracellular communication [].

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=89.75  E-value=3.2  Score=25.38  Aligned_cols=28  Identities=14%  Similarity=0.179  Sum_probs=24.6

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEE
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYT  106 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~  106 (132)
                      .++.|+++.|+|++++.+.+.+ .|.++.
T Consensus         8 ~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~   36 (154)
T cd07237           8 QGLGHVVLATPDPDEAHAFYRDVLGFRLS   36 (154)
T ss_pred             CccCEEEEEeCCHHHHHHHHHHccCCEEE
Confidence            5689999999999999999987 898764

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=89.67  E-value=3.2  Score=25.33  Aligned_cols=56  Identities=11%  Similarity=-0.072  Sum_probs=32.1

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhh--cCCeeeccCC-CCCCCceeEEEEe-CCeEEEEEec
Q 032856           10 VSVHHVGILCENLERSLEFYQNI--LGLEINEARP-HDKLPYRGAWLWV-GAEMIHLMEL   65 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~--lg~~~~~~~~-~~~~~~~~~~~~~-~~~~~~l~~~   65 (132)
                      .+++|++|.|.|++++.+.+..+  .|.++..... ........+|+.- ++..+++...
T Consensus        66 ~g~~Hiaf~v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~  125 (153)
T cd07257          66 SGVHHAAFEVHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTD  125 (153)
T ss_pred             CceeEEEEEcCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcC
Confidence            57999999999999998443332  5777653211 1111112234433 4557777643

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=89.65  E-value=2.8  Score=24.71  Aligned_cols=28  Identities=18%  Similarity=0.392  Sum_probs=20.1

Q ss_pred             eeeeEEEEeC--CHHHHHHHHHhhcCCeeec
Q 032856           11 SVHHVGILCE--NLERSLEFYQNILGLEINE   39 (132)
Q Consensus        11 ~~~hv~i~v~--d~~~~~~fy~~~lg~~~~~   39 (132)
                      +++|+++.|.  |+++..+-.++ .|.....
T Consensus        66 ~~~Hiaf~v~~~~ld~~~~~l~~-~gv~~~~   95 (131)
T cd08364          66 TYNHIAFKISDSDVDEYTERIKA-LGVEMKP   95 (131)
T ss_pred             CceEEEEEcCHHHHHHHHHHHHH-CCCEEec
Confidence            5899999998  56666666655 6776554

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=89.62  E-value=2.9  Score=24.72  Aligned_cols=27  Identities=7%  Similarity=0.036  Sum_probs=23.1

Q ss_pred             ceEEEEEECCHHHHHHHHHh-CCCeEEc
Q 032856           81 DRHTCIAIRDVSKLKMILDK-AGISYTL  107 (132)
Q Consensus        81 ~~hi~~~v~d~~~~~~~l~~-~g~~~~~  107 (132)
                      +.|+++.|+|++++.+.+.+ .|.++..
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~   28 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLV   28 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEec
Confidence            47999999999999999987 6887653

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=89.50  E-value=2.5  Score=23.88  Aligned_cols=28  Identities=18%  Similarity=0.237  Sum_probs=23.3

Q ss_pred             eeeEEEEeCCHHHHHHHHHhhcCCeeecc
Q 032856           12 VHHVGILCENLERSLEFYQNILGLEINEA   40 (132)
Q Consensus        12 ~~hv~i~v~d~~~~~~fy~~~lg~~~~~~   40 (132)
                      ..|+.+.|.|++++.+-+.+ .|.+....
T Consensus        58 ~~~i~~~v~d~~~~~~~l~~-~G~~~~~~   85 (112)
T cd07238          58 VPDLSIEVDDVDAALARAVA-AGFAIVYG   85 (112)
T ss_pred             CCEEEEEeCCHHHHHHHHHh-cCCeEecC
Confidence            46999999999999988877 68887653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=89.37  E-value=2.8  Score=24.17  Aligned_cols=30  Identities=13%  Similarity=0.098  Sum_probs=25.4

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEEcc
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS  108 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~  108 (132)
                      .++.|+++.|+|++++.+.+.+ .|.+....
T Consensus         3 ~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~   33 (122)
T cd07265           3 LRPGHVQLRVLDLEEAIKHYREVLGLDEVGR   33 (122)
T ss_pred             ceEeEEEEEeCCHHHHHHHHHhccCCEeeee
Confidence            3578999999999999999986 89987544

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=88.68  E-value=3.3  Score=24.14  Aligned_cols=47  Identities=15%  Similarity=0.215  Sum_probs=31.4

Q ss_pred             CceEEEEEECCHHHHHHHHHh-CCCeEEccCCCccEEEEe-CCCCCeEEEE
Q 032856           80 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTR-DPDANALEFT  128 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~-Dp~G~~iel~  128 (132)
                      .+.|+++.|+|++++.+.+.+ .|.+......  ...|+. +.++..+.+.
T Consensus         6 ~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~--~~~~l~~~~~~~~i~l~   54 (124)
T cd08361           6 DIAYVRLGTRDLAGATRFATDILGLQVAERTA--KATYFRSDARDHTLVYI   54 (124)
T ss_pred             EeeEEEEeeCCHHHHHHHHHhccCceeccCCC--CeEEEEcCCccEEEEEE
Confidence            468999999999999999987 6988654322  234443 3334444443

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=88.51  E-value=3.9  Score=24.74  Aligned_cols=28  Identities=18%  Similarity=0.241  Sum_probs=23.7

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEE
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYT  106 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~  106 (132)
                      ..+.|+.+.|+|++++.+.+++ .|.+..
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~   31 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVS   31 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEE
Confidence            3578999999999999999966 788764

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=88.00  E-value=4  Score=24.32  Aligned_cols=29  Identities=14%  Similarity=0.182  Sum_probs=22.3

Q ss_pred             eeeeeEEEEeC--CHHHHHHHHHhhcCCeeec
Q 032856           10 VSVHHVGILCE--NLERSLEFYQNILGLEINE   39 (132)
Q Consensus        10 ~~~~hv~i~v~--d~~~~~~fy~~~lg~~~~~   39 (132)
                      .+++|+++.+.  |++++.+...+ .|.++..
T Consensus        62 ~~~~hiaf~v~~~dv~~~~~~l~~-~G~~i~~   92 (139)
T PRK04101         62 QSYTHIAFSIEEEDFDHWYQRLKE-NDVNILP   92 (139)
T ss_pred             CCeeEEEEEecHHHHHHHHHHHHH-CCceEcC
Confidence            35789999987  88888888777 6887654

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=87.86  E-value=3.4  Score=23.35  Aligned_cols=31  Identities=6%  Similarity=-0.025  Sum_probs=25.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccC
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEAR   41 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~   41 (132)
                      ....|+.+.|.|++++.+-..+ .|.++....
T Consensus        60 ~~~~~~~f~v~di~~~~~~l~~-~g~~~~~~~   90 (114)
T cd07247          60 PPGWLVYFAVDDVDAAAARVEA-AGGKVLVPP   90 (114)
T ss_pred             CCeEEEEEEeCCHHHHHHHHHH-CCCEEEeCC
Confidence            4567899999999999998877 698877543

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=87.68  E-value=3.3  Score=23.31  Aligned_cols=53  Identities=17%  Similarity=0.346  Sum_probs=30.1

Q ss_pred             eeeeeEEEEeC--CHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEE
Q 032856           10 VSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLM   63 (132)
Q Consensus        10 ~~~~hv~i~v~--d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~   63 (132)
                      .++.|+++.|.  |++++.+-..+ .|.++..............++.- ++..++++
T Consensus        54 ~~~~hiaf~v~~~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEi~  109 (113)
T cd08345          54 RTYTHIAFQIQSEEFDEYTERLKA-LGVEMKPERPRVQGEGRSIYFYDPDGHLLELH  109 (113)
T ss_pred             CCccEEEEEcCHHHHHHHHHHHHH-cCCccCCCccccCCCceEEEEECCCCCEEEEE
Confidence            45789999994  66766676666 57776543222111223344443 45566665

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07268 Glo_EDI_BRP_like_4 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=87.52  E-value=4.9  Score=24.76  Aligned_cols=74  Identities=15%  Similarity=0.115  Sum_probs=45.7

Q ss_pred             eeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEE------EeCCeEEEEEecCCCCCCCCCCCCCCCceEEE
Q 032856           12 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWL------WVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC   85 (132)
Q Consensus        12 ~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~   85 (132)
                      ++||.++|++.+.|.+|-+.++..-..-... .-.+-..+.+      ..++..+.+++.+-+..  +.+ ...|.-||.
T Consensus         2 ~DHialR~n~~~~A~~w~~~l~~~G~llSen-~INGRPI~l~~L~qPl~~~~~~I~cvELP~P~~--k~Y-p~eGWEHIE   77 (149)
T cd07268           2 IDHIALRVNENQTAERWKEGLLQCGELLSEN-EINGRPIALIKLEKPLQFAGWSISIVELPFPKD--KKY-PQEGWEHIE   77 (149)
T ss_pred             CceEEEeeCCHHHHHHHHHHHHHhchhhhcc-ccCCeeEEEEEcCCCceeCCcEEEEEEeCCCCC--CCC-CCCCceEEE
Confidence            5899999999999999998877654322111 1111122223      33455666666554432  222 236789999


Q ss_pred             EEEC
Q 032856           86 IAIR   89 (132)
Q Consensus        86 ~~v~   89 (132)
                      +.++
T Consensus        78 ~Vlp   81 (149)
T cd07268          78 IVIP   81 (149)
T ss_pred             EEec
Confidence            9998

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=86.28  E-value=5.2  Score=23.87  Aligned_cols=27  Identities=15%  Similarity=0.196  Sum_probs=23.2

Q ss_pred             CceEEEEEECCHHHHHHHHHh-CCCeEE
Q 032856           80 RDRHTCIAIRDVSKLKMILDK-AGISYT  106 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~  106 (132)
                      .+.|+++.|.|++...+-..+ .|.+..
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~   29 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVL   29 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEE
Confidence            368999999999999999965 899864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=85.85  E-value=5  Score=23.21  Aligned_cols=48  Identities=19%  Similarity=0.284  Sum_probs=31.1

Q ss_pred             CceEEEEEECCHHHHHHHHHh-CCCeEEccCCCccEEEEeCCCCCeEEEEe
Q 032856           80 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~Dp~G~~iel~~  129 (132)
                      .+.|+++.|+|+++..+.+.+ .|++......  ...++...+|..+++..
T Consensus         4 ~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~l~~~~   52 (123)
T cd08351           4 TLNHTIVPARDREASAEFYAEILGLPWAKPFG--PFAVVKLDNGVSLDFAQ   52 (123)
T ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEeeeccC--CEEEEEcCCCcEEEEec
Confidence            468999999999999999976 6987654321  12333333455555443

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=85.61  E-value=5  Score=23.01  Aligned_cols=27  Identities=4%  Similarity=0.156  Sum_probs=22.1

Q ss_pred             eeEEEEeCCHHHHHHHHHhhcCCeeecc
Q 032856           13 HHVGILCENLERSLEFYQNILGLEINEA   40 (132)
Q Consensus        13 ~hv~i~v~d~~~~~~fy~~~lg~~~~~~   40 (132)
                      .|+.|.|.|++++.+...+ .|.+....
T Consensus        73 ~~~~~~v~di~~~~~~l~~-~G~~~~~~   99 (125)
T cd07264          73 FEIAFVTDDVAAAFARAVE-AGAVLVSE   99 (125)
T ss_pred             EEEEEEcCCHHHHHHHHHH-cCCEeccC
Confidence            4889999999999888877 68877554

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=85.31  E-value=5  Score=22.82  Aligned_cols=30  Identities=13%  Similarity=0.155  Sum_probs=24.8

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEEcc
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS  108 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~  108 (132)
                      .++.|+.+.|+|+++..+.+.+ .|.+....
T Consensus         2 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~   32 (120)
T cd08362           2 TALRGVGLGVPDLAAAAAFYREVWGLSVVAE   32 (120)
T ss_pred             ceeeEEEEecCCHHHHHHHHHhCcCcEEEEe
Confidence            3578999999999999998887 78876543

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd04882 ACT_Bt0572_2 C-terminal ACT domain of a novel protein composed of just two ACT domains

Probab=85.16  E-value=3.1  Score=20.97  Aligned_cols=25  Identities=16%  Similarity=0.271  Sum_probs=21.8

Q ss_pred             ceEEEEEECCHHHHHHHHHhCCCeE
Q 032856           81 DRHTCIAIRDVSKLKMILDKAGISY  105 (132)
Q Consensus        81 ~~hi~~~v~d~~~~~~~l~~~g~~~  105 (132)
                      ...+.+.+++.+.+.+.|+++|+++
T Consensus        40 ~~~v~~~ve~~~~~~~~L~~~G~~v   64 (65)
T cd04882          40 KALLIFRTEDIEKAIEVLQERGVEL   64 (65)
T ss_pred             eEEEEEEeCCHHHHHHHHHHCCceE
Confidence            4568999999999999999999864

Included in this CD is the C-terminal ACT domain of a novel protein composed of just two ACT domains, as seen in the yet uncharacterized structure (pdb 2F06) of the Bt0572 protein from Bacteroides thetaiotaomicron and related proteins. Members of this CD belong to the superfamily of ACT regulatory domains.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=84.94  E-value=5.4  Score=22.81  Aligned_cols=30  Identities=20%  Similarity=0.222  Sum_probs=25.4

Q ss_pred             CceEEEEEECCHHHHHHHHHh-CCCeEEccC
Q 032856           80 RDRHTCIAIRDVSKLKMILDK-AGISYTLSK  109 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~  109 (132)
                      ++.|+.+.|+|++++.+.+.+ .|.++....
T Consensus         4 ~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~   34 (121)
T cd07266           4 RLGHVELRVTDLEKSREFYVDVLGLVETEED   34 (121)
T ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeccC
Confidence            578999999999999999987 898876443

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=84.29  E-value=5.9  Score=22.75  Aligned_cols=28  Identities=18%  Similarity=0.169  Sum_probs=18.3

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhh--cCCee
Q 032856           10 VSVHHVGILCENLERSLEFYQNI--LGLEI   37 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~--lg~~~   37 (132)
                      .+++|+++.|.+.+.-.++++.+  .|.+.
T Consensus        61 ~~~~h~af~v~~~~~v~~~~~~l~~~G~~~   90 (121)
T cd09013          61 AGLGHIAWRASSPEALERRVAALEASGLGI   90 (121)
T ss_pred             CceEEEEEEcCCHHHHHHHHHHHHHcCCcc
Confidence            46889999998655555555443  46654

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=82.20  E-value=7.1  Score=22.14  Aligned_cols=31  Identities=6%  Similarity=0.012  Sum_probs=23.1

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccC
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEAR   41 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~   41 (132)
                      .+..|+.+.|.|++++.+-..+ .|.+.....
T Consensus        67 ~~~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~   97 (122)
T cd07246          67 GTPVSLHLYVEDVDATFARAVA-AGATSVMPP   97 (122)
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-CCCeEecCc
Confidence            3567999999999988776665 588766543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=81.58  E-value=9.2  Score=23.02  Aligned_cols=55  Identities=15%  Similarity=0.143  Sum_probs=30.7

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhh--cCCeeeccC-CCCCCCceeEEEEe-CCeEEEEEe
Q 032856           10 VSVHHVGILCENLERSLEFYQNI--LGLEINEAR-PHDKLPYRGAWLWV-GAEMIHLME   64 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~--lg~~~~~~~-~~~~~~~~~~~~~~-~~~~~~l~~   64 (132)
                      .+++|+++.|.|++...+.+..+  .|.++.... ..........|+.- ++..+++..
T Consensus        66 ~~~~Hiaf~v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~  124 (143)
T cd07243          66 GKLHHFSFFLESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFA  124 (143)
T ss_pred             CCceEEEEEcCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEec
Confidence            46789999999988855444332  577654321 11111112344443 556787765

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=80.88  E-value=8.4  Score=22.14  Aligned_cols=28  Identities=14%  Similarity=0.240  Sum_probs=24.0

Q ss_pred             CceEEEEEECCHHHHHHHHHh-CCCeEEc
Q 032856           80 RDRHTCIAIRDVSKLKMILDK-AGISYTL  107 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~  107 (132)
                      ++.|+.+.|+|++++.+.+.+ .|.+...
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~   29 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHV   29 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEE
Confidence            468999999999999999986 8987654

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=80.78  E-value=3.4  Score=23.39  Aligned_cols=28  Identities=14%  Similarity=0.183  Sum_probs=24.3

Q ss_pred             CceEEEEEECCHHHHHHHHHh-CCCeEEc
Q 032856           80 RDRHTCIAIRDVSKLKMILDK-AGISYTL  107 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~  107 (132)
                      .+.|+++.|+|+++..+.+++ .|.+...
T Consensus         2 ~l~hv~l~v~dl~~s~~FY~~~LG~~~~~   30 (138)
T COG0346           2 GIHHVTLAVPDLEASIDFYTDVLGLRLVK   30 (138)
T ss_pred             ceEEEEEeeCCHhHhHHHHHhhcCCeeee
Confidence            368999999999999999987 8888754

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=80.76  E-value=9  Score=22.41  Aligned_cols=25  Identities=16%  Similarity=0.290  Sum_probs=21.8

Q ss_pred             eEEEEEECCHHHHHHHHHh-CCCeEE
Q 032856           82 RHTCIAIRDVSKLKMILDK-AGISYT  106 (132)
Q Consensus        82 ~hi~~~v~d~~~~~~~l~~-~g~~~~  106 (132)
                      .|+++.|.|++++.+.+.+ .|.+..
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~   26 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVS   26 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEE
Confidence            4899999999999998876 798864

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>PF07063 DUF1338: Domain of unknown function (DUF1338); InterPro: IPR009770 This domain is found in a variety of bacterial and fungal hypothetical proteins of unknown function

Probab=80.70  E-value=2.3  Score=29.45  Aligned_cols=29  Identities=21%  Similarity=0.322  Sum_probs=22.4

Q ss_pred             CCCceEEEEEE------CCHHHHHHHHHhCCCeEE
Q 032856           78 GGRDRHTCIAI------RDVSKLKMILDKAGISYT  106 (132)
Q Consensus        78 ~~~~~hi~~~v------~d~~~~~~~l~~~g~~~~  106 (132)
                      +..++|++..|      .|++++.+.|+++|++..
T Consensus       182 G~~~NH~T~~v~~l~~~~dI~~v~~~l~~~G~~~n  216 (302)
T PF07063_consen  182 GYHINHFTPRVNRLKKFLDIDAVNAFLKERGIPMN  216 (302)
T ss_dssp             TCS-SEEEEETTT-TT-S-HHHHHHHHHHTT--B-
T ss_pred             ccccceeeceeecccccccHHHHHHHHHHcCCCcc
Confidence            56789999999      999999999999999876

The structure of this domain has been solved by structural genomics. The structure implies a zinc-binding function, so it is a putative metal hydrolase (information derived from TOPSAN for PDB:3iuz).; PDB: 3LHO_A 3IUZ_A 2RJB_C.

>cd04883 ACT_AcuB C-terminal ACT domain of the Bacillus subtilis acetoin utilization protein, AcuB

Probab=80.24  E-value=6.4  Score=20.34  Aligned_cols=27  Identities=11%  Similarity=0.097  Sum_probs=20.5

Q ss_pred             eEEEEEE--CCHHHHHHHHHhCCCeEEcc
Q 032856           82 RHTCIAI--RDVSKLKMILDKAGISYTLS  108 (132)
Q Consensus        82 ~hi~~~v--~d~~~~~~~l~~~g~~~~~~  108 (132)
                      ..+.+.+  ++.+.+.+.|+++|+++.++
T Consensus        43 ~~v~i~v~~~~~~~~~~~L~~~G~~v~~~   71 (72)
T cd04883          43 KILVFRVQTMNPRPIIEDLRRAGYEVLWP   71 (72)
T ss_pred             EEEEEEEecCCHHHHHHHHHHCCCeeeCC
Confidence            3355555  48889999999999987654

This CD includes the C-terminal ACT domain of the Bacillus subtilis acetoin utilization protein, AcuB. AcuB is putatively involved in the anaerobic catabolism of acetoin, and related proteins. Studies report the induction of AcuB by nitrate respiration and also by fermentation. Since acetoin can be secreted and later serve as a source of carbon, it has been proposed that, during anaerobic growth when other carbon sources are exhausted, the induction of the AcuB protein results in acetoin catabolism. AcuB-like proteins have two N-terminal tandem CBS domains and a single C-terminal ACT domain. Members of this CD belong to the superfamily of ACT regulatory domains.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	132
3rmu_A	134	Crystal Structure Of Human Methylmalonyl-Coa Epimer		1e-06

>pdb|3RMU|A Chain A, Crystal Structure Of Human Methylmalonyl-Coa Epimerase, Mcee Length = 134

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 14/121 (11%)
Query: 12  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRG---AWLWVG---AEMIHLMEL 65
           ++HV I   +LE++  FY+NILG +++EA P   LP  G    ++ +G    E++H + L
Sbjct: 6   LNHVAIAVPDLEKAAAFYKNILGAQVSEAVP---LPEHGVSVVFVNLGNTKMELLHPLGL 62
Query: 66  PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGI-----SYTLSKSGRPAIFTRDP 120
            +P     +    G   H CI + +++   M L K  I        +   G+P IF    
Sbjct: 63  DSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPK 122
Query: 121 D 121
           D
Sbjct: 123 D 123

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	132
2p25_A	126	Glyoxalase family protein; structural genomics, MC	8e-31
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	5e-27
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	8e-27
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	1e-23
1nki_A	135	Probable fosfomycin resistance protein; potassium	5e-22
3ghj_A	141	Putative integron gene cassette protein; integron	1e-21
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	5e-21
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	1e-19
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	7e-18
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	1e-17
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	2e-17
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	5e-17
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	7e-17
3huh_A	152	Virulence protein STM3117; structural genomics, ny	3e-16
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	8e-16
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	2e-15
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	3e-15
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	6e-14
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	4e-13
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	4e-13
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	1e-12
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	2e-11
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	5e-05
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-11
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	6e-11
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	8e-05
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	1e-10
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-10
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-10
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	6e-10
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	7e-10
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-09
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	5e-09
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	2e-08
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	6e-08
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	8e-08
2i7r_A	118	Conserved domain protein; structural genomics cons	8e-08
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	1e-07
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	2e-07
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	2e-07
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	1e-04
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	2e-07
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	3e-07
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	4e-05
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	3e-07
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	4e-07
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	6e-07
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	1e-06
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	1e-06
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	4e-06
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	1e-05
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	1e-05
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	2e-05
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	2e-05
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	2e-05
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	3e-05
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	2e-04
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-04
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	3e-04
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	4e-04
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	4e-04
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	5e-04
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	7e-04
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	9e-04

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score =  105 bits (265), Expect = 8e-31
 Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 5/123 (4%)

Query: 11  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 70
            +HHV I   N + +  FY   LG E+       +       L +G++ + +        
Sbjct: 5   EIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPA 64

Query: 71  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALE 126
               PE  G  RH    +  + ++   L++ GI     +    +G+   F  DPD   LE
Sbjct: 65  RPSYPEALGL-RHLAFKVEHIEEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLE 123

Query: 127 FTQ 129
             +
Sbjct: 124 LHE 126

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 96.3 bits (240), Expect = 5e-27
 Identities = 31/129 (24%), Positives = 44/129 (34%), Gaps = 11/129 (8%)

Query: 12  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLM-------E 64
           VHHV ++  + ++S EFY N LG E+       K       L  G   + +         
Sbjct: 6   VHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSN 65

Query: 65  LPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT----LSKSGRPAIFTRDP 120
              P      P      RH    + DV   +  L   GI          +G+   F  DP
Sbjct: 66  YCAPPERISWPREACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDP 125

Query: 121 DANALEFTQ 129
           D   LE  +
Sbjct: 126 DGLPLELHE 134

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 95.7 bits (238), Expect = 8e-27
 Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 13/125 (10%)

Query: 9   VVSVHHVGILC--ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELP 66
           +  + HV +       E +  FY   +G+E    +P +     G W   G + IH+    
Sbjct: 8   IQGIDHVQVAAPVGCEEEARAFYGETIGMEEIP-KPEELKKRGGCWFKCGNQEIHIGVEQ 66

Query: 67  NPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS--GRPAIFTRDPDANA 124
           N +P         +  H    +  + + K  L K GI      +       +  DP  N 
Sbjct: 67  NFNP--------AKRAHPAFYVLKIDEFKQELIKQGIEVIDDHARPDVIRFYVSDPFGNR 118

Query: 125 LEFTQ 129
           +EF +
Sbjct: 119 IEFME 123

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 88.3 bits (219), Expect = 1e-23
 Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 12/122 (9%)

Query: 9   VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 68
           + S++H+ +   +L++S+ F+  +LGL ++           GA+L  G   + L      
Sbjct: 2   LQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT------GAYLTCGDLWVCLSYDEAR 55

Query: 69  DPLSGRPEHGGRDRHTCIAIR--DVSKLKMILDKAGISY-TLSKSGRPAIFTRDPDANAL 125
                 P       H    +   D   L   L++AG++    +KS   + +  DPD + L
Sbjct: 56  QY---VPPQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKL 112

Query: 126 EF 127
           E 
Sbjct: 113 EL 114

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 83.7 bits (207), Expect = 5e-22
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 11/120 (9%)

Query: 9   VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 68
           +  ++H+ +   +L  S+ FY+++LG  +      +    +GA+L +G+  + L   P  
Sbjct: 2   LTGLNHLTLAVADLPASIAFYRDLLGFRL------EARWDQGAYLELGSLWLCLSREPQY 55

Query: 69  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY-TLSKSGRPAIFTRDPDANALEF 127
               G P          IA  D ++    L   G+     ++S   + +  DPD + LE 
Sbjct: 56  ----GGPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEA 111

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 83.1 bits (206), Expect = 1e-21
 Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 18/124 (14%)

Query: 11  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 70
            +  V +  +NLE+S +FY  ILG E        +  +   W+   A M+ L E      
Sbjct: 28  GLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSARR--WNFLWVSGRAGMVVLQE------ 79

Query: 71  LSGRPEHGGRDRHTCIAI--RDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANA 124
                +   + +H    +   ++  LK  L+  G+S     +       +++  DP+ +A
Sbjct: 80  ----EKENWQQQHFSFRVEKSEIEPLKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHA 135

Query: 125 LEFT 128
           LEFT
Sbjct: 136 LEFT 139

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 81.8 bits (202), Expect = 5e-21
 Identities = 26/130 (20%), Positives = 43/130 (33%), Gaps = 13/130 (10%)

Query: 12  VHHVGILCENLERSLEFYQNILGLEI------NEARPHDKLPYRGAWLWVGAE-MIHLME 64
           VHH+ +  ++++ S  FY  ILGL                   + A        ++ L  
Sbjct: 20  VHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFG 79

Query: 65  LPNPDPLSGRPEH-GGRDRHTCIAIRDVSKLKMI--LDKAGISYTLSKSGRP---AIFTR 118
            P   P    PE    R  H    I      + +  + +  I+       RP    ++  
Sbjct: 80  EPELSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFY 139

Query: 119 DPDANALEFT 128
           DPD   +E  
Sbjct: 140 DPDGFMIEIR 149

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 73.2 bits (180), Expect = 7e-18
 Identities = 28/124 (22%), Positives = 44/124 (35%), Gaps = 7/124 (5%)

Query: 9   VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 68
           +  V HV +   +L+ S  +Y  IL  +       D   +       G   I L E    
Sbjct: 3   LSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGV-LPGGLSIVLREHDGG 61

Query: 69  DPLSGRPEHGGRDRHTCIAIRDVSKLKMI---LDKAGISYT--LSKSGRPAIFTRDPDAN 123
                     G D H   ++  ++ L ++   L KAG ++T          +  RD D  
Sbjct: 62  GTDLFDETRPGLD-HLSFSVESMTDLDVLEERLAKAGAAFTPTQELPFGWILAFRDADNI 120

Query: 124 ALEF 127
           ALE 
Sbjct: 121 ALEA 124

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 72.9 bits (179), Expect = 1e-17
 Identities = 28/131 (21%), Positives = 55/131 (41%), Gaps = 15/131 (11%)

Query: 9   VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN- 67
             ++    +  ++L+ +  FY+++ GLE        KLP +  +   G +M+ L +    
Sbjct: 6   PSAIMETALYADDLDAAEAFYRDVFGLE-----MVLKLPGQLVFFKCGRQMLLLFDPQES 60

Query: 68  --PDPLSGRPEHGGRDR-HTCIAIR---DVSKLKMILDKAGI---SYTLSKSGRPAIFTR 118
              D  +  P HG   + H C       +V + K   +   I    Y    +G  +++ R
Sbjct: 61  SRADANNPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIR 120

Query: 119 DPDANALEFTQ 129
           DP  N++E  +
Sbjct: 121 DPAGNSVEVGE 131

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 71.7 bits (176), Expect = 2e-17
 Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 10/128 (7%)

Query: 12  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP- 70
           ++HV I   +LE++  FY+NILG +++EA P  +      ++ +G   + L+     D  
Sbjct: 6   LNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSP 65

Query: 71  --LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT-----LSKSGRPAIF--TRDPD 121
                +    G   H CI + +++   M L K  I        +   G+P IF   +D  
Sbjct: 66  IAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCG 125

Query: 122 ANALEFTQ 129
              +E  Q
Sbjct: 126 GVLVELEQ 133

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 71.1 bits (174), Expect = 5e-17
 Identities = 17/124 (13%), Positives = 38/124 (30%), Gaps = 11/124 (8%)

Query: 9   VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPN 67
           +  + H+  +  +LER     + +       A   ++    R  +  +G   + +M+   
Sbjct: 2   IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEK 61

Query: 68  PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDAN 123
                   E         I   D  +    + K G+     +        +I+  D D +
Sbjct: 62  L------AERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNH 115

Query: 124 ALEF 127
             E 
Sbjct: 116 MFEL 119

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 70.5 bits (173), Expect = 7e-17
 Identities = 22/125 (17%), Positives = 49/125 (39%), Gaps = 7/125 (5%)

Query: 12  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD-P 70
           VHH+G   +N++ +L+ ++ +  +E +E    +       ++  G   + L+     D P
Sbjct: 8   VHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSP 67

Query: 71  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIS------YTLSKSGRPAIFTRDPDANA 124
           ++   + G    H C  + D+ K    + + G +         +   R   F    D   
Sbjct: 68  INKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGL 127

Query: 125 LEFTQ 129
           +E  +
Sbjct: 128 IELLE 132

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 69.3 bits (169), Expect = 3e-16
 Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 13/128 (10%)

Query: 9   VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 68
           +  + H+ +   ++  ++ FY+ +LG      + +         L  GA+ I+L +    
Sbjct: 21  IDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQNR------KALIFGAQKINLHQQEME 74

Query: 69  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-------AIFTRDPD 121
                     G      I    ++ +   + +AGIS       R        +I+ RDPD
Sbjct: 75  FEPKASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPD 134

Query: 122 ANALEFTQ 129
            N +E +Q
Sbjct: 135 GNLIEISQ 142

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 67.9 bits (166), Expect = 8e-16
 Identities = 18/124 (14%), Positives = 41/124 (33%), Gaps = 11/124 (8%)

Query: 9   VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPN 67
           +  + H+ ++ ++L ++  F QNI   E   +         +  +  +    I +ME  +
Sbjct: 2   ISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDS 61

Query: 68  PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDAN 123
                   E         I   +V +    +   G+     +        +I+  D D +
Sbjct: 62  L------QERTYNHIAFQIQSEEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNH 115

Query: 124 ALEF 127
             E 
Sbjct: 116 LFEL 119

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 66.5 bits (162), Expect = 2e-15
 Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 13/126 (10%)

Query: 9   VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 68
           +  + H+ +   ++  +  FY+ +LG++                L  G + I+L +L N 
Sbjct: 8   ISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGAG------RIALEFGHQKINLHQLGNE 61

Query: 69  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR-------PAIFTRDPD 121
                +    G      I    +S     ++  G++       R        + + RDPD
Sbjct: 62  FEPKAQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPD 121

Query: 122 ANALEF 127
            N +E 
Sbjct: 122 GNLIEV 127

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 66.1 bits (161), Expect = 3e-15
 Identities = 22/125 (17%), Positives = 43/125 (34%), Gaps = 10/125 (8%)

Query: 12  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDP 70
           + HV +   NLE+  +FY    G   N+   +    +   +L       + +M   +   
Sbjct: 4   IEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTG 63

Query: 71  LSGRPEHGGRDRHTCIAIRDVSKLKMI---LDKAGISYT----LSKSGRPAIFTRDPDAN 123
            +     G    H  I+      +  +   L + G +      ++  G       DP+ N
Sbjct: 64  KTTGENLGW--AHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGN 121

Query: 124 ALEFT 128
            +E T
Sbjct: 122 RIEIT 126

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 63.7 bits (155), Expect = 6e-14
 Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 9/127 (7%)

Query: 12  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD-- 69
           + H+GI   +++  L FY   L L++           + A+L +G   I L+E  + +  
Sbjct: 9   LDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESP 68

Query: 70  PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY-----TLSKSGRPAIF--TRDPDA 122
                 + G    H  I ++ + +    + + G+            G    F   R    
Sbjct: 69  IAKFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARG 128

Query: 123 NALEFTQ 129
              EF +
Sbjct: 129 VLYEFCE 135

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 61.2 bits (148), Expect = 4e-13
 Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 13/124 (10%)

Query: 11  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 70
            + H+ +  ++++ +  FY  ILG+E+   +           L  G +  +L E+     
Sbjct: 27  RLDHIVMTVKSIKDTTMFYSKILGMEVMTFKEDR------KALCFGDQKFNLHEVGKEFE 80

Query: 71  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-------AIFTRDPDAN 123
                   G      I    + ++   L    +        R        +I+ RDPD N
Sbjct: 81  PKAAHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRN 140

Query: 124 ALEF 127
            +E 
Sbjct: 141 LIEV 144

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 61.0 bits (148), Expect = 4e-13
 Identities = 18/142 (12%), Positives = 47/142 (33%), Gaps = 23/142 (16%)

Query: 9   VVSVHHVGILCENLERSLEFYQNILGLEI-----NEARPHDKLP------YRGAWLWV-- 55
           ++ + +V I+ E+L+ ++ F++  +GL +      E     ++          A +    
Sbjct: 9   LLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD 67

Query: 56  GAEMIHLMELPNPDPLSGRPEHGGRD---RHTCIAIRDVSKLKMILDKAGISYTLSKSGR 112
           G   I L     P  ++                  + D+ ++   L K G    + +  +
Sbjct: 68  GHSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAE-LVGEVVQ 126

Query: 113 P-----AIFTRDPDANALEFTQ 129
                   + R  +   +   +
Sbjct: 127 YENSYRLCYIRGVEGILIGLAE 148

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 60.3 bits (146), Expect = 1e-12
 Identities = 24/126 (19%), Positives = 39/126 (30%), Gaps = 13/126 (10%)

Query: 12  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 71
           +HHV I  ++LE S+ F+  +LG    E         RG     G   +  ++  +    
Sbjct: 21  LHHVEINVDHLEESIAFWDWLLGELGYE-DYQS--WSRGKSYKHGKTYLVFVQTEDRFQT 77

Query: 72  SGRPEHGGRDRHTCIAIRD---VSKLKMILDKAGISYTLSKSGRP-------AIFTRDPD 121
                      H          V +L   L + G                  A+F  DP+
Sbjct: 78  PTFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPN 137

Query: 122 ANALEF 127
              +E 
Sbjct: 138 RIKVEI 143

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 58.6 bits (141), Expect = 2e-11
 Identities = 24/127 (18%), Positives = 45/127 (35%), Gaps = 9/127 (7%)

Query: 12  VHHVGILCENLERSLEFYQNILGLEI-----NEARPHDKLPYRGAWLWVGAEMIHLMELP 66
           +HH+  +  + + + +FY  +LGL +     N   P     Y G     G     +   P
Sbjct: 9   IHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGN--EGGKPGTIITFFP 66

Query: 67  NPDPLSGRPEHGGRDRHT-CIAIRDVSKLKMILDKAGISYTLSKS-GRPAIFTRDPDANA 124
                 G    G     +  +    ++  +  L+K  + YT  +  G   +   DP    
Sbjct: 67  WAGARQGVIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYTKIERFGEQYVEFDDPHGLH 126

Query: 125 LEFTQVD 131
           LE  + +
Sbjct: 127 LEIVERE 133

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 40.5 bits (94), Expect = 5e-05
 Identities = 21/122 (17%), Positives = 31/122 (25%), Gaps = 14/122 (11%)

Query: 12  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 71
                +L E  +++ +  +NI+GLE                      +I L   P     
Sbjct: 154 FGGATLLSEQPDKTADLLENIMGLERVGKEGDFVRYRSAGD---IGNVIDLKLTPIGRGQ 210

Query: 72  SGRPEHGGRDRHTCIAIRDVSKLKMILDK---AGISYTLSKSGR---PAIFTRDPDANAL 125
            G     G   H      D              G   T     R    AI+ R+      
Sbjct: 211 MGA----GTVHHIAWRANDDEDQLDWQRYIASHGYGVT-PVRDRNYFNAIYFREHGEILF 265

Query: 126 EF 127
           E 
Sbjct: 266 EI 267

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 56.6 bits (136), Expect = 2e-11
 Identities = 23/129 (17%), Positives = 46/129 (35%), Gaps = 21/129 (16%)

Query: 17  ILCENLERSLEFYQNILGLEINEARPHDKLPYR---GAWLWVGAEMIHLMELPNPDPLSG 73
           + C ++  S  F+ ++LG E+   RP ++  Y    G  +     M+  +   +   LSG
Sbjct: 11  LYCFDINVSQSFFVDVLGFEVKYERPDEEFVYLTLDGVDV-----MLEGIAGKSRKWLSG 65

Query: 74  RPEHG-GRDRHTCIAIRDVSKLKMILDKAGISYTL------------SKSGRPAIFTRDP 120
             E   G   +    + D+  L   ++++                  S + +     + P
Sbjct: 66  DLEFPLGSGVNFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTP 125

Query: 121 DANALEFTQ 129
           D     F Q
Sbjct: 126 DGYLFRFCQ 134

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 57.3 bits (138), Expect = 6e-11
 Identities = 21/129 (16%), Positives = 43/129 (33%), Gaps = 11/129 (8%)

Query: 12  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL----PN 67
            HH+ ++ +N   +  FY+N+LGL   +   +   P     L+ G +             
Sbjct: 31  HHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPS-MYHLFYGDKTGSPGTELSFFEI 89

Query: 68  PDPLSGRPEHGGRDRHTCIAIRDVSKL---KMILDKAGISYT--LSKSGRPAIFTRDPDA 122
           P                 + +     L   K   +K  + ++   + + RPA+   D + 
Sbjct: 90  PLVGRTYRGTNA-ITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEG 148

Query: 123 NALEFTQVD 131
             L     +
Sbjct: 149 LRLVLLVSN 157

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 39.6 bits (92), Expect = 8e-05
 Identities = 15/123 (12%), Positives = 40/123 (32%), Gaps = 13/123 (10%)

Query: 12  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 71
           +  V +    L++       I G          +      +  +  E    + +   D  
Sbjct: 181 MGSVELTVRRLDKMASTLTEIFGY-----TEVSRNDQEAIFQSIKGEAFGEIVVKYLDGP 235

Query: 72  SGRPEHGGRDRHTCIAIRDVSKL---KMILDKAGISYTLSKSGR---PAIFTRDPDANAL 125
           + +P  G    H  I +++ ++L   +  + + G   +     R    +++ R+ +    
Sbjct: 236 TEKPGRGS-IHHLAIRVKNDAELAYWEEQVKQRGFHSS-GIIDRFYFKSLYFRESNGILF 293

Query: 126 EFT 128
           E  
Sbjct: 294 EIA 296

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 54.5 bits (131), Expect = 1e-10
 Identities = 23/121 (19%), Positives = 42/121 (34%), Gaps = 8/121 (6%)

Query: 13  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 72
            +      ++ RS  FY++ LGL+I E      L   G  +  G  +   +   + D   
Sbjct: 10  VNPIPFVRDINRSKSFYRDRLGLKILEDFGSFVLFETGFAIHEGRSLEETIWRTSSDA-- 67

Query: 73  GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY----TLSKSGRPAIFTRDPDANALEFT 128
            +  +G R+        DV      +    +           G+      DPD +A+E  
Sbjct: 68  -QEAYGRRNMLLYFEHADVDAAFQDI-APHVELIHPLERQAWGQRVFRFYDPDGHAIEVG 125

Query: 129 Q 129
           +
Sbjct: 126 E 126

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 53.4 bits (128), Expect = 3e-10
 Identities = 23/129 (17%), Positives = 36/129 (27%), Gaps = 11/129 (8%)

Query: 11  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVG---AEMIHLMELP 66
            + +V I   ++     FYQ + G +  E+               +G    E   LM+L 
Sbjct: 8   DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYELMQLA 67

Query: 67  NPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDA 122
                SG                 V KL  +   AG +   +              DP+ 
Sbjct: 68  QFSETSGIKFLLN---FDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWYQAVLLDPER 124

Query: 123 NALEFTQVD 131
           N      V 
Sbjct: 125 NVFRINNVL 133

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 52.8 bits (126), Expect = 4e-10
 Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 16/125 (12%)

Query: 11  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 70
            V H+ I   +L+ + +FY   LG ++    P           +    + HL +  + + 
Sbjct: 9   DVFHLAIPARDLDEAYDFYVTKLGCKLARRYPD----RITLDFFGDQLVCHLSDRWDREV 64

Query: 71  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR--------PAIFTRDPDA 122
                  G     T    +    L  +  + GI +    S R           F  DP  
Sbjct: 65  SMYPRHFG----ITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSN 120

Query: 123 NALEF 127
           N LEF
Sbjct: 121 NLLEF 125

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 52.0 bits (125), Expect = 6e-10
 Identities = 14/118 (11%), Positives = 33/118 (27%), Gaps = 16/118 (13%)

Query: 13  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 72
            H+ +   ++  + EF +   GL  +            A+  +      ++ L     + 
Sbjct: 5   KHLNLTVADVVAAREFLEKYFGLTCSGT-------RGNAFAVMRDNDGFILTL-----MK 52

Query: 73  GRPEHGGRDRHTCIAIRDVSKLKMILDK---AGISYTLSKSGRP-AIFTRDPDANALE 126
           G+     +  H         ++  I  +    G      K       +   P    +E
Sbjct: 53  GKEVQYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIE 110

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 53.9 bits (129), Expect = 7e-10
 Identities = 22/129 (17%), Positives = 39/129 (30%), Gaps = 25/129 (19%)

Query: 9   VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 68
           + S+  + +    L+R L FY N+LG +    +           + +G   I        
Sbjct: 24  MTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGVSQIQFRA---- 73

Query: 69  DPLSGRPEHGGRDRHTCIAI--RDVSKLKMILDKAGISYTLSKSGRP--------AIFTR 118
              +          H  I I      + K  L   G   T +   +         + +  
Sbjct: 74  ---AADGTKPF--YHIAINIAANHFQEGKAWLSGFGELLTENDEDQAYFPFFNAYSCYVE 128

Query: 119 DPDANALEF 127
           DP  N +E 
Sbjct: 129 DPSGNIIEL 137

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 51.7 bits (123), Expect = 2e-09
 Identities = 18/126 (14%), Positives = 37/126 (29%), Gaps = 8/126 (6%)

Query: 12  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 71
           +H   +  ++  ++  FY   LG  +    P     +         +   L+  P+    
Sbjct: 27  IHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAA 86

Query: 72  SG---RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL----SKSGRPAIFTRDPDANA 124
                             A+ D++     L   G+ +T           AI   D   N 
Sbjct: 87  VTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPVVTAIL-DDTCGNL 145

Query: 125 LEFTQV 130
           ++  Q+
Sbjct: 146 IQLMQI 151

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 50.0 bits (119), Expect = 5e-09
 Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 15/128 (11%)

Query: 10  VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 69
           + +  + I   +L+  L FY+ I+G +   A   DK                L  + NP 
Sbjct: 5   LLITSITINTSHLQGMLGFYR-IIGFQF-TASKVDKGSEVHR-AVHNGVEFSLYSIQNPQ 61

Query: 70  PLSGRPEHGGRDRHTCIAIRDVSK-LKMILDKAGISYTL----SKSGRPAIFTRDPDANA 124
                             I D+ K ++ ++   G    L       G+ AI   DPD ++
Sbjct: 62  R------SQIPSLQLGFQITDLEKTVQELVKIPGAMCILDPTDMPDGKKAIV-LDPDGHS 114

Query: 125 LEFTQVDG 132
           +E  +++G
Sbjct: 115 IELCELEG 122

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 48.7 bits (116), Expect = 2e-08
 Identities = 20/122 (16%), Positives = 41/122 (33%), Gaps = 19/122 (15%)

Query: 14  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 73
              +   +L  +LEFY+ +L   +  A   +          +   ++          ++G
Sbjct: 9   LSRLYVADLNPALEFYEELLETPV--AMRFEIPQTGVELAQISTILL----------IAG 56

Query: 74  RPEHGGRDRHTCIAIR--DVSKLKMILDKAGISYTL----SKSGRPAIFTRDPDANALEF 127
             E     R+T        + K K  L++ G           +GR     R  D + +E+
Sbjct: 57  SEEALKPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRNMTV-RHSDGSVIEY 115

Query: 128 TQ 129
            +
Sbjct: 116 VE 117

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 47.5 bits (113), Expect = 6e-08
 Identities = 21/142 (14%), Positives = 46/142 (32%), Gaps = 20/142 (14%)

Query: 8   GVVSVHHVGILCENLERSLEFYQNILGLE-----INEARPHDKLPYRG---------AWL 53
            + +   +GI+  ++E SL+ Y    G+E       +        + G         A+ 
Sbjct: 16  DMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFF 75

Query: 54  WVGAEMIHLMELPNPD--PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIS--YTLSK 109
            +G   + L+E             ++G    H    ++D+ +    L + G+        
Sbjct: 76  ELGPLQLELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDF 135

Query: 110 SGRPAIF--TRDPDANALEFTQ 129
            G    +  T       +E  +
Sbjct: 136 EGGRYAYIDTLRALKVMIELLE 157

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score = 47.0 bits (112), Expect = 8e-08
 Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 14/115 (12%)

Query: 14  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE------MIHLMELPN 67
           H  I   +L+RS++FY   LG++    R  D    +   +++G        ++ L     
Sbjct: 11  HTMIRVGDLDRSIKFYTERLGMK--VLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 68

Query: 68  PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL-SKSGRPAIFTRDPD 121
                   +H     H  I + DV +L   + K  +      +SG  A F  DPD
Sbjct: 69  VTS----YKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDESGFMA-FVVDPD 118

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 46.7 bits (111), Expect = 8e-08
 Identities = 18/121 (14%), Positives = 42/121 (34%), Gaps = 15/121 (12%)

Query: 14  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 73
            + I+  N+ +     ++IL  + + A          A   +G+  + L +         
Sbjct: 8   QLDIIVSNVPQVCADLEHILDKKADYANDG------FAQFTIGSHCLMLSQNH-----LV 56

Query: 74  RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEFTQ 129
             E+        I + DV +    L++ GI      +       ++  + P    L+F +
Sbjct: 57  PLENFQSGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYR 116

Query: 130 V 130
           +
Sbjct: 117 M 117

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 46.4 bits (110), Expect = 1e-07
 Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 18/121 (14%)

Query: 17  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 76
           +   +++ +L  + + LG E+     +       A+L +    + L+E P          
Sbjct: 13  LHIPDMQEALTLFCDTLGFELKYRHSNY------AYLELSGCGLRLLEEPARKI----IP 62

Query: 77  HGGRDRHTCIAIRDV----SKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEFT 128
            G      CI + D+    +KL   L+             P        R PD + L FT
Sbjct: 63  DGIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNFT 122

Query: 129 Q 129
            
Sbjct: 123 A 123

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score = 46.9 bits (111), Expect = 2e-07
 Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 27/136 (19%)

Query: 13  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-------------------RGAWL 53
               +  ++ ++SL+FY  +LGL + +      + +                   + AW 
Sbjct: 33  QQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWT 92

Query: 54  WVGAEMIHLMELPNPDPLSGRPEHGGRD-----RHTCIAIRDVSKLKMILDKAGISYT-L 107
           +     + L      +    +  H G        H  IA+ DV       ++ G+ +   
Sbjct: 93  FSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKK 152

Query: 108 SKSGRPAI--FTRDPD 121
              G+     F +DPD
Sbjct: 153 PDDGKMKGLAFIQDPD 168

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 47.3 bits (112), Expect = 2e-07
 Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 23/135 (17%)

Query: 1   MSVEGDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMI 60
           MS++  + +  +    +     + +L+F+   LG+ +   R    +  RG          
Sbjct: 1   MSLDARFDIAHLARAELFSPKPQETLDFFTKFLGMYVTH-REGQSVYLRG---------- 49

Query: 61  HLMELPNPDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKS---GR 112
                 +P P S +            A+R      + +    L    +  T S+      
Sbjct: 50  ----YEDPYPWSLKITEAPEAGMGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYG 105

Query: 113 PAIFTRDPDANALEF 127
                + PD + L+ 
Sbjct: 106 KTFEYQSPDGHNLQL 120

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 39.2 bits (91), Expect = 1e-04
 Identities = 19/125 (15%), Positives = 39/125 (31%), Gaps = 9/125 (7%)

Query: 9   VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 68
           V  + H+ ++  ++    + ++  LG    E R  D     GAW+        +  + + 
Sbjct: 151 VKRIDHLNLMSSDVTAVKDSFERHLGFRTTE-RVVDGNVEIGAWMSSNLLGHEVACMRDM 209

Query: 69  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAG--ISYTLSKSG---RPAIFTRDPDAN 123
               G+  H      T    +       +       I     K G      ++  +P  N
Sbjct: 210 TGGHGKLHHLAFFYGT---GQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGN 266

Query: 124 ALEFT 128
            +E  
Sbjct: 267 RIELF 271

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 45.8 bits (108), Expect = 2e-07
 Identities = 21/125 (16%), Positives = 33/125 (26%), Gaps = 14/125 (11%)

Query: 11  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 70
            V  + +   +LE S  FY    G       P         +  +   ++    + N   
Sbjct: 5   QVAVITLGIGDLEASARFYGEGFGWAPVFRNPE------IIFYQMNGFVLATWLVQNLQE 58

Query: 71  LSGRPEHGGRDRHT----CIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDA 122
             G                 A  +V+ L   L  AG          P      +  DPD 
Sbjct: 59  DVGVAVTSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGLRGYVADPDG 118

Query: 123 NALEF 127
           +  E 
Sbjct: 119 HIWEI 123

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 46.8 bits (111), Expect = 3e-07
 Identities = 18/132 (13%), Positives = 40/132 (30%), Gaps = 24/132 (18%)

Query: 6   DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 65
           + GV+   HV +   ++ ++LE Y  +LGL   +     ++  +                
Sbjct: 2   NKGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKA--------------W 47

Query: 66  PNPDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSG-----RPAI 115
              D  S             +  +      + +L+  L   G +     +G        +
Sbjct: 48  TEVDKFSLVLREADEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRV 107

Query: 116 FTRDPDANALEF 127
             + P  +  E 
Sbjct: 108 RFQAPSGHHFEL 119

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 40.6 bits (95), Expect = 4e-05
 Identities = 18/132 (13%), Positives = 37/132 (28%), Gaps = 22/132 (16%)

Query: 8   GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 67
             V   H  +  + L  + + +  +LG  + E    +       +L +  +   +  + +
Sbjct: 147 AAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHH 206

Query: 68  PDPLSGRPEHGGRDRHTCIA---IRDVSKLKMILDKAG--ISYTLSKSGR----PAIFT- 117
           P+         GR  H         D+ +   ++      I        R          
Sbjct: 207 PEK--------GRLHHVSFHLETWEDLLRAADLISMTDTSIDIGP---TRHGLTHGKTIY 255

Query: 118 -RDPDANALEFT 128
             DP  N  E  
Sbjct: 256 FFDPSGNRNEVF 267

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 45.4 bits (107), Expect = 3e-07
 Identities = 19/123 (15%), Positives = 39/123 (31%), Gaps = 8/123 (6%)

Query: 13  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 72
               +  +N   S +FY+ +LG++  E+ P         ++      + L      +P +
Sbjct: 27  DFTILYVDNPPASTQFYKALLGVDPVESSPT-----FSLFVLANGMKLGLWSRHTVEPKA 81

Query: 73  GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP---AIFTRDPDANALEFTQ 129
                GG           V +       +G++     +           DPD++ L    
Sbjct: 82  SVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYTFTAADPDSHRLRVYA 141

Query: 130 VDG 132
             G
Sbjct: 142 FAG 144

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 45.5 bits (107), Expect = 4e-07
 Identities = 20/137 (14%), Positives = 45/137 (32%), Gaps = 11/137 (8%)

Query: 1   MSVEGDYGVVSVHHVGIL-CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-- 57
           MS   + G V   +  +   +++++++++++ ILG   +     D+       ++     
Sbjct: 10  MSRFSERGYVVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDEGFGDYGCVFDYPSE 69

Query: 58  -EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP--- 113
             + HL          G P  G       + I  +  L   + + G         +P   
Sbjct: 70  VAVAHLTPFRGFHLFKGEPIKGV---AGFMMIEGIDALHKYVKENGWDQISDIYTQPWGA 126

Query: 114 -AIFTRDPDANALEFTQ 129
                   D   L F +
Sbjct: 127 RECSITTTDGCILRFFE 143

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score = 44.7 bits (106), Expect = 6e-07
 Identities = 24/113 (21%), Positives = 49/113 (43%), Gaps = 5/113 (4%)

Query: 14  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 73
           H  +   +L+RS++FY  +LG+++     + +  Y  A++  G E    +     +    
Sbjct: 5   HTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVD 64

Query: 74  RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT----LSKSGRPAI-FTRDPD 121
           + E G    H  +++ + ++    + + G + T      K G   I F  DPD
Sbjct: 65  KYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPD 117

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 43.9 bits (103), Expect = 1e-06
 Identities = 20/118 (16%), Positives = 38/118 (32%), Gaps = 8/118 (6%)

Query: 13  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 72
           + V    +N  +S EFY+N+L  +  E+ P         ++      + L      +P +
Sbjct: 8   NLVLFYVKNPAKSEEFYKNLLDTQPIESSPT-----FAMFVMKTGLRLGLWAQEEIEPKA 62

Query: 73  GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP---AIFTRDPDANALEF 127
            +   G        +   V ++        IS     +           DPD + L  
Sbjct: 63  HQTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYTFVGVDPDEHRLRI 120

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 42.7 bits (100), Expect = 4e-06
 Identities = 18/138 (13%), Positives = 40/138 (28%), Gaps = 17/138 (12%)

Query: 9   VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV------GAEMIHL 62
            + + HV   C + + + ++YQ   G        + +       +            + +
Sbjct: 7   FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQV 66

Query: 63  MELPNPD-PLSGRPEHGGRDR---HTCIAIRDVSKLKMILDKAGISY-----TLSKSGRP 113
           M   N +  ++             H    + D+  +   L + G+        L   G  
Sbjct: 67  MAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR 126

Query: 114 AIF--TRDPDANALEFTQ 129
             F   +      +E TQ
Sbjct: 127 INFMHPKSGKGVLIELTQ 144

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 40.9 bits (96), Expect = 1e-05
 Identities = 20/124 (16%), Positives = 33/124 (26%), Gaps = 16/124 (12%)

Query: 10  VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 69
           V      I      R+  FY +ILG+ +  A  H              E    +      
Sbjct: 6   VRRVVANIATPEPARAQAFYGDILGMPV--AMDHG----WIVTHASPLEAHAQVSFAREG 59

Query: 70  PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANAL 125
                   G       I + +  ++   + KAG+               +F RDP    +
Sbjct: 60  G------SGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLI 113

Query: 126 EFTQ 129
               
Sbjct: 114 NILS 117

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 41.9 bits (98), Expect = 1e-05
 Identities = 23/129 (17%), Positives = 41/129 (31%), Gaps = 25/129 (19%)

Query: 9   VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 68
           +V   ++ I+  +L +S EFY ++LGL + E    + +  R               L   
Sbjct: 15  IVRCAYMEIVVTDLAKSREFYVDVLGLHVTE-EDENTIYLRS--------------LEEF 59

Query: 69  DPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYT-----LSKSGRPAIFTR 118
              +     G        A R     +V   +    + G          +K    ++   
Sbjct: 60  IHHNLVLRQGPIAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVE 119

Query: 119 DPDANALEF 127
           DP     EF
Sbjct: 120 DPLGFPYEF 128

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 41.8 bits (98), Expect = 2e-05
 Identities = 21/130 (16%), Positives = 38/130 (29%), Gaps = 24/130 (18%)

Query: 8   GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 67
           GV+   H  +   NLE  + FY+N+LGL         ++ ++                  
Sbjct: 5   GVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDDQGRVYFKC--------------WDE 50

Query: 68  PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSGRP-----AIFT 117
            D                   +      + KL   L   G++ T   +G        +  
Sbjct: 51  RDHSCYIIREADTAGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRF 110

Query: 118 RDPDANALEF 127
             P  + +E 
Sbjct: 111 ELPSGHLIEL 120

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 40.2 bits (94), Expect = 2e-05
 Identities = 22/121 (18%), Positives = 40/121 (33%), Gaps = 7/121 (5%)

Query: 13  HHVGILCENLERSLEFYQNILGLEINEARPHDK--LPYRGAWLWVGAEMIHLMELPNPDP 70
               ++ E++ +SLEFY+  LG+EI                 + +  + +  +   +P+ 
Sbjct: 6   SLFAVVVEDMAKSLEFYRK-LGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPEW 64

Query: 71  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALE 126
            +    H             V K    L  AG    L              +DPD N ++
Sbjct: 65  QAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVD 124

Query: 127 F 127
            
Sbjct: 125 L 125

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 41.6 bits (97), Expect = 2e-05
 Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 25/129 (19%)

Query: 9   VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 68
           ++   +  ++  +L +S  FY ++LGL ++     +++  R                   
Sbjct: 15  ILRCAYAELVVTDLAKSRNFYVDVLGLHVSY-EDENQIYLRSFE--------------EF 59

Query: 69  DPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSG-----RPAIFTR 118
              +     G       +A R     DV K +    + G      K G       A+   
Sbjct: 60  IHHNLVLTKGPVAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVE 119

Query: 119 DPDANALEF 127
           DP     EF
Sbjct: 120 DPLGFPYEF 128

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A Length = 124

 Score = 39.9 bits (93), Expect = 3e-05
 Identities = 13/114 (11%), Positives = 28/114 (24%), Gaps = 9/114 (7%)

Query: 19  CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG 78
             ++  ++EF+ + LG         D      A +      + +  + +           
Sbjct: 13  ARDVAEAVEFWTDRLGFSR--VFVEDDF----AGVVRDDVTLFISAVQDQVVPDNTQAWV 66

Query: 79  GRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP---AIFTRDPDANALEFTQ 129
                  +       +      A          +P       RDP  N + F  
Sbjct: 67  WVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA 120

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 38.0 bits (88), Expect = 2e-04
 Identities = 21/118 (17%), Positives = 33/118 (27%), Gaps = 9/118 (7%)

Query: 21  NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGR 80
            L+  + FY+  L L+           Y G    +     HL E                
Sbjct: 21  QLDEIIRFYEEGLCLKR-IGEFSQHNGYDGVMFGLPHADYHL-EF-TQYEGGSTAPVPHP 77

Query: 81  DRHTCIAIRDVSKLKMI---LDKAGISYTLSKS---GRPAIFTRDPDANALEFTQVDG 132
           D      + +  +L  I   L   G     S++       +   DPD   + F    G
Sbjct: 78  DSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSKG 135

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 38.7 bits (90), Expect = 2e-04
 Identities = 23/137 (16%), Positives = 42/137 (30%), Gaps = 27/137 (19%)

Query: 1   MSVEGDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMI 60
           MS+     V  + +VG   ++ +    FY ++ GLE       +   ++           
Sbjct: 1   MSL---SRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVG-EDANNAWFKAQG-------- 48

Query: 61  HLMELPNPDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSGRPAI 115
                   +    +      +R   IA+      DV  L+  ++ AG          PA+
Sbjct: 49  ------ADEHHVVQLRRADENRIDVIALAADSRSDVDALRASVEAAGCKVA----SEPAV 98

Query: 116 FTRDPDANALEFTQVDG 132
                      F   DG
Sbjct: 99  LATPGGGYGFRFFSPDG 115

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 36.9 bits (85), Expect = 3e-04
 Identities = 18/132 (13%), Positives = 39/132 (29%), Gaps = 19/132 (14%)

Query: 9   VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 68
            ++ +   +   N+ERS +FY+ I   E     P      R        + +  +     
Sbjct: 11  TITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP------RYVAFPSSGDALFAIWSGGE 64

Query: 69  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDK------AGISYTLSKSGRP---AIFTRD 119
           +P++  P          I +     +  + ++        I                  D
Sbjct: 65  EPVAEIPRFS----EIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTFLISD 120

Query: 120 PDANALEFTQVD 131
           PD + +    +D
Sbjct: 121 PDGHIIRVCPLD 132

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A Length = 126

 Score = 36.8 bits (85), Expect = 4e-04
 Identities = 24/126 (19%), Positives = 39/126 (30%), Gaps = 29/126 (23%)

Query: 19  CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV--GAEMIHLMELPNPDPLSGRPE 76
             + + +  FY+  LG  I              W+ +  G  M+     P  DPL+    
Sbjct: 11  SRDFDSTAAFYER-LGFGIVFRDAG--------WMILQRGDLMLEFFAHPGLDPLASWFS 61

Query: 77  HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR----------PAIFT-RDPDANAL 125
                   C+ + D+++        GI  T S   R            +    DPD   L
Sbjct: 62  -------CCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLL 114

Query: 126 EFTQVD 131
              Q +
Sbjct: 115 RLIQNE 120

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 37.7 bits (87), Expect = 4e-04
 Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 28/132 (21%)

Query: 8   GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 67
            V  + ++G+   NL+   ++   I+G+++ +    D++ Y                   
Sbjct: 3   KVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGEDDRI-YLRMD--------------- 46

Query: 68  PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSG-------RPAI 115
                      G D    I  R     ++ +L   L  AGI + ++             +
Sbjct: 47  RWHHRIVLHADGSDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLV 106

Query: 116 FTRDPDANALEF 127
              DP  N  E 
Sbjct: 107 KLHDPGGNPTEI 118

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A Length = 122

 Score = 36.4 bits (84), Expect = 5e-04
 Identities = 21/123 (17%), Positives = 40/123 (32%), Gaps = 27/123 (21%)

Query: 19  CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG 78
             ++  ++ F+ + LG E  +    D   +  A +  G   +H+    +           
Sbjct: 13  AVDVPANVSFWVDTLGFEK-DFGDRD---F--AGVRRGDIRLHISRTEHQIVADN----- 61

Query: 79  GRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAI-----------FT-RDPDANALE 126
                  I + D   L     +A  +   + +  PA+           F  RDP  N + 
Sbjct: 62  ---TSAWIEVTDPDALHEEWARAVSTD-YADTSGPAMTPVGESPAGREFAVRDPAGNCVH 117

Query: 127 FTQ 129
           FT 
Sbjct: 118 FTA 120

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 36.9 bits (85), Expect = 7e-04
 Identities = 22/132 (16%), Positives = 41/132 (31%), Gaps = 28/132 (21%)

Query: 8   GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 67
            V+ + ++GI  ++ +    F  ++LGL++ +    D+   R                 +
Sbjct: 6   AVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGEKDRFYLRM----------------D 49

Query: 68  PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKS-------GRPAI 115
                    H G+D    +  R     +   L   L  AG    +              +
Sbjct: 50  YWHHRIVVHHNGQDDLEYLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLM 109

Query: 116 FTRDPDANALEF 127
            T DP  N  E 
Sbjct: 110 KTEDPGGNPTEI 121

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 35.9 bits (83), Expect = 9e-04
 Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 9/120 (7%)

Query: 15  VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR 74
           V +   + +R++++   + G  +   +P        A L  G  ++ +     P  +S  
Sbjct: 6   VELAYTDPDRAVDWLVRVFGFRLLLRQPAIGTIRH-ADLDTGGGIVMVRRTGEPYTVS-- 62

Query: 75  PEHGGRDRHTCIAIRDVSKLKMILDKAG--ISYTLSKS---GRPAIFTRDPDANALEFTQ 129
              G   +   + + DV +  M    AG  I   L       R  +  RD + +  EFT+
Sbjct: 63  CAGGHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDKPWGLRQYLV-RDLEGHLWEFTR 121

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	132
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.96
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.94
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.94
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.94
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.94
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.94
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.94
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.93
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.93
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.93
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.93
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.93
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.93
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.93
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.92
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.92
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.92
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.92
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.92
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.92
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.92
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.91
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.91
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.91
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.91
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.91
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.91
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.91
3ghj_A	141	Putative integron gene cassette protein; integron	99.91
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.91
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.91
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.91
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.9
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.9
2i7r_A	118	Conserved domain protein; structural genomics cons	99.9
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.89
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.89
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.89
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.89
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.89
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.88
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.88
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.88
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.88
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.88
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.87
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.87
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.87
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.87
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.87
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.86
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.86
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.85
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.84
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.84
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.84
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.84
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.84
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.84
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.83
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.83
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.83
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.83
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.83
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.83
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.82
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.82
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.82
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.82
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.82
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.82
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.81
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.81
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.81
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.81
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.8
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.8
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.79
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.79
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.78
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.77
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.77
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.77
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.76
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.75
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.73
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.73
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.7
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.68
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.68
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.65
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.64
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.63
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.62
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.6
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.6
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.56
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.54
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.54
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.52
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.51
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.48
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.47
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.4
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.85
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	98.71
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	98.64
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	97.68
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	97.37
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	96.5
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	96.25
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	96.24
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	96.13
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	96.05
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	95.97
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	95.89
3ghj_A	141	Putative integron gene cassette protein; integron	95.86
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	95.73
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	95.72
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	95.71
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	95.69
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	95.57
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	95.27
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	95.25
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	94.96
2p25_A	126	Glyoxalase family protein; structural genomics, MC	94.72
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	94.65
3huh_A	152	Virulence protein STM3117; structural genomics, ny	94.5
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	94.4
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	94.3
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	94.14
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	94.13
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	93.99
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	93.82
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	93.71
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	93.67
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	93.64
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	93.54
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	93.49
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	93.37
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	93.18
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	93.17
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	93.15
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	92.44
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	92.22
1k4n_A	192	Protein EC4020, protein YECM; structural genomics,	91.92
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	91.83
1nki_A	135	Probable fosfomycin resistance protein; potassium	91.57
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	91.39
3iuz_A	340	Putative glyoxalase superfamily protein; struct ge	91.08
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	90.93
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	90.66
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	89.48
2i7r_A	118	Conserved domain protein; structural genomics cons	89.22
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	88.95
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	88.52
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	88.47
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	88.44
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	88.17
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	87.35
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	85.95
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	85.69
2g3a_A	152	Acetyltransferase; structural genomics, PSI, prote	84.64
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	84.26
3lho_A	267	Putative hydrolase; structural genomics, joint cen	81.71

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.96  E-value=2.3e-27  Score=141.19  Aligned_cols=123  Identities=25%  Similarity=0.329  Sum_probs=96.8

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEe-------cCCCCCCCCCCCCCC
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLME-------LPNPDPLSGRPEHGG   79 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~   79 (132)
                      |++++++||+|.|+|++++++||+++||+++......+......+++..++..++++.       ..........+....
T Consensus         1 M~i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (134)
T 3l7t_A            1 MKLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCAPPERISWPREAC   80 (134)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETTEEEEEEECCTTSTTCCCCCCCCCSSSCCS
T ss_pred             CceeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCCeEEEEEecccccccccCCccccCCCCCCC
Confidence            4678999999999999999999999999999876543344445677888888888887       222222112222456


Q ss_pred             CceEEEEEECCHHHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEe
Q 032856           80 RDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~  129 (132)
                      +..|++|.|+|+++++++|+++|+++...    ..+.+.+|++|||||.|||+|
T Consensus        81 g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           81 GLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTSCCEEEEEECTTCCEEEEEC
T ss_pred             CeEEEEEEECCHHHHHHHHHhCCCcccceeccCCCceEEEEEECCCCCEEEEeC
Confidence            77899999999999999999999987543    346789999999999999986

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.94  E-value=1.8e-26  Score=137.70  Aligned_cols=123  Identities=17%  Similarity=0.255  Sum_probs=96.0

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccC-CCCCCCceeEEEEeCCeEEEEEecCCCCCCCCC-CCCCCCceEE
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEAR-PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR-PEHGGRDRHT   84 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~hi   84 (132)
                      .|+++++||+|.|+|+++|++||+ +||+++.... ..+..+...+++..++..++++........... ...+.++.|+
T Consensus         3 ~M~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~g~~hi   81 (133)
T 3hdp_A            3 HMSLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSPINKTIKKGSTPYHI   81 (133)
T ss_dssp             CCCCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEETTEEEEEEEESSTTCTHHHHTTTSCEEEEE
T ss_pred             ccceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCCCEEEEEEecCCCCChHHHHHhcCCceEEE
Confidence            467899999999999999999999 9999987653 123344567788888888999876554322100 0114677899


Q ss_pred             EEEECCHHHHHHHHHhCCCeEEcc------CCCccEEEEeCCCCCeEEEEee
Q 032856           85 CIAIRDVSKLKMILDKAGISYTLS------KSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        85 ~~~v~d~~~~~~~l~~~g~~~~~~------~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      +|.|+|+++++++|+++|+++...      ..+.+.+|++|||||.|||+|.
T Consensus        82 af~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           82 CYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             EEEESCHHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEEC
T ss_pred             EEEcCCHHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEEEEecC
Confidence            999999999999999999987542      2467899999999999999983

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.94  E-value=2.2e-25  Score=135.98  Aligned_cols=129  Identities=18%  Similarity=0.214  Sum_probs=97.3

Q ss_pred             CCCCceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCC------CCceeEEEEeCC-eEEEEEecCCCCCCCCC-
Q 032856            3 VEGDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK------LPYRGAWLWVGA-EMIHLMELPNPDPLSGR-   74 (132)
Q Consensus         3 ~~~~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~------~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~-   74 (132)
                      ...++++++++||+|.|+|++++++||+++|||++......+.      .....+++..++ ..++++........... 
T Consensus        11 ~~~~~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~   90 (156)
T 3kol_A           11 VLAPGNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPELSPPDPNP   90 (156)
T ss_dssp             CCCTTSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECTTCCCSSSST
T ss_pred             ccCccccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecCCCCcCCCCC
Confidence            3455788999999999999999999999999999887432211      112446777755 67888876554322111 


Q ss_pred             CCCCCCceEEEEEEC--CHHHHHHHHHhCCCeEEccC---CCccEEEEeCCCCCeEEEEeeC
Q 032856           75 PEHGGRDRHTCIAIR--DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        75 ~~~~~~~~hi~~~v~--d~~~~~~~l~~~g~~~~~~~---~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      .....+..|++|.|+  |+++++++|+++|+++...+   ..++.+||+|||||.|||++.+
T Consensus        91 ~~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~  152 (156)
T 3kol_A           91 EKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFYDPDGFMIEIRCDP  152 (156)
T ss_dssp             TCCCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-CCEEEEEECTTSCEEEEEECC
T ss_pred             CCCCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCCccEEEEECCCCCEEEEEecC
Confidence            123466889999999  99999999999999985432   3456999999999999999875

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.94  E-value=6.4e-26  Score=133.78  Aligned_cols=122  Identities=20%  Similarity=0.250  Sum_probs=92.1

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   86 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   86 (132)
                      |++.+++|++|.|+|++++.+||+++||+++......+......+++..++..++|+.......... .....+..|++|
T Consensus         1 M~~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~-~~~~~g~~~~~~   79 (126)
T 2p25_A            1 MFFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPARPS-YPEALGLRHLAF   79 (126)
T ss_dssp             CTTSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTEEEEEEECTTCCCCCC-SSCCSSCCCEEE
T ss_pred             CcccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCeEEEEEeccCCCCCCC-CCCCccceEEEE
Confidence            4578999999999999999999999999998764321111223355777777888876543322211 122356789999


Q ss_pred             EECCHHHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEe
Q 032856           87 AIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        87 ~v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~  129 (132)
                      .|+|+++++++|+++|+++...    +.+.+.+|++|||||.|||+|
T Consensus        80 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           80 KVEHIEEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             ECSCHHHHHHHHHHTTCCCCCCEECTTTCCEEEEEECTTCCEEEEEC
T ss_pred             EeCCHHHHHHHHHHcCCccccccccCCCCcEEEEEECCCCCEEEeeC
Confidence            9999999999999999987543    245688999999999999986

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.94  E-value=3.8e-25  Score=131.63  Aligned_cols=120  Identities=17%  Similarity=0.249  Sum_probs=95.7

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEE
Q 032856            5 GDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   84 (132)
Q Consensus         5 ~~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi   84 (132)
                      .+|++.+++|++|.|+|++++++||+++|||++.....      ..+++..++..+.+......... .......+..|+
T Consensus         4 ~~m~~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~   76 (133)
T 3ey7_A            4 FLMKISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA------GRIALEFGHQKINLHQLGNEFEP-KAQNVRVGSADL   76 (133)
T ss_dssp             CCCCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT------TEEEEEETTEEEEEEETTSCCSS-CCTTCCTTCCEE
T ss_pred             eEeEecccCEEEEEECCHHHHHHHHHHccCceEEEecC------CeEEEEcCCEEEEEEcCCCCccc-cCCCCCCCccEE
Confidence            45778999999999999999999999999999987632      35678888888888776544222 122234567899


Q ss_pred             EEEECC-HHHHHHHHHhCCCeEEccC----C---CccEEEEeCCCCCeEEEEeeC
Q 032856           85 CIAIRD-VSKLKMILDKAGISYTLSK----S---GRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        85 ~~~v~d-~~~~~~~l~~~g~~~~~~~----~---~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      +|.|+| +++++++|+++|+++...+    .   +.+.+|++|||||.|||.+..
T Consensus        77 ~~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~  131 (133)
T 3ey7_A           77 CFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYS  131 (133)
T ss_dssp             EEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESC
T ss_pred             EEEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecC
Confidence            999997 9999999999999875432    1   238999999999999999975

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.94  E-value=5.5e-25  Score=130.24  Aligned_cols=117  Identities=21%  Similarity=0.293  Sum_probs=92.8

Q ss_pred             CceeeeeeeEEEEe--CCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceE
Q 032856            6 DYGVVSVHHVGILC--ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRH   83 (132)
Q Consensus         6 ~~~~~~~~hv~i~v--~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~h   83 (132)
                      .|++.+++||.|.|  +|++++++||+++||+++....... .....+|+..++..+++.......        ..+..|
T Consensus         5 ~m~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~l~l~~~~~~~--------~~~~~~   75 (126)
T 2qqz_A            5 RNYIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEEL-KKRGGCWFKCGNQEIHIGVEQNFN--------PAKRAH   75 (126)
T ss_dssp             CCCEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGG-GGGCCEEEEETTEEEEEEECTTCC--------CCSSSC
T ss_pred             hcccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccc-cCCCceEEEeCCEEEEEEecCCCC--------CCCceE
Confidence            36789999999999  8999999999999999987643211 011346788888777776532211        145689


Q ss_pred             EEEEECCHHHHHHHHHhCCCeEEccC--CCccEEEEeCCCCCeEEEEeeC
Q 032856           84 TCIAIRDVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        84 i~~~v~d~~~~~~~l~~~g~~~~~~~--~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      ++|.|+|+++++++|+++|+++...+  .+.+.+|++|||||.|||.+..
T Consensus        76 ~~f~v~d~~~~~~~l~~~G~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           76 PAFYVLKIDEFKQELIKQGIEVIDDHARPDVIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             EEEEETTHHHHHHHHHHTTCCCEEECSSTTEEEEEEECTTSCEEEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHcCCCccCCCCCCCeeEEEEECCCCCEEEEEeCC
Confidence            99999999999999999999876543  4678999999999999999875

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.94  E-value=9.8e-26  Score=134.09  Aligned_cols=123  Identities=26%  Similarity=0.414  Sum_probs=95.0

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCC---CCCCCCceEE
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR---PEHGGRDRHT   84 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~hi   84 (132)
                      |+.+++|++|.|+|++++++||+++||++.......+..+...+++..++..++++...........   .....+..|+
T Consensus         2 m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~hi   81 (134)
T 3rmu_A            2 MLGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIAGFLQKNKAGGMHHI   81 (134)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSSSEEEEEEECSTTCTTHHHHHHCTTCEEEEE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCCEEEEEEecCCCCchhhhhhhccCCCCceEE
Confidence            4789999999999999999999999999988654433334567788888888888776554322110   0234577999


Q ss_pred             EEEECCHHHHHHHHHhCCCeEEccC-----CCccEEEE--eCCCCCeEEEEee
Q 032856           85 CIAIRDVSKLKMILDKAGISYTLSK-----SGRPAIFT--RDPDANALEFTQV  130 (132)
Q Consensus        85 ~~~v~d~~~~~~~l~~~g~~~~~~~-----~~~~~~~~--~Dp~G~~iel~~~  130 (132)
                      +|.|+|+++++++|+++|+++..++     .+.+.+++  +||+||.|||+|.
T Consensus        82 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           82 CIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             EEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEEC
T ss_pred             EEEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEcC
Confidence            9999999999999999999875432     34456666  8999999999973

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.93  E-value=6.4e-25  Score=134.82  Aligned_cols=127  Identities=17%  Similarity=0.209  Sum_probs=99.0

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCC--------------CCCceeEEEEeCCeEEEEEecCCCCC
Q 032856            5 GDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--------------KLPYRGAWLWVGAEMIHLMELPNPDP   70 (132)
Q Consensus         5 ~~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~l~~~~~~~~   70 (132)
                      ..+++++++||+|.|+|++++++||+++||+++......+              ......+++..++..++|+.......
T Consensus        13 ~~~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~leL~~~~~~~~   92 (159)
T 3gm5_A           13 NILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGPLQLELIEPDENPS   92 (159)
T ss_dssp             SCCCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETTEEEEEEEECSSSC
T ss_pred             cccccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecCCEEEEEEEECCCCC
Confidence            4577899999999999999999999999999976543221              23456788888988999988654321


Q ss_pred             CCCC--CCCCCCceEEEEEECCHHHHHHHHHhCCCeEEcc--CCCccEEEEeCCC--CCeEEEEeeC
Q 032856           71 LSGR--PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS--KSGRPAIFTRDPD--ANALEFTQVD  131 (132)
Q Consensus        71 ~~~~--~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~--~~~~~~~~~~Dp~--G~~iel~~~~  131 (132)
                      ....  ...+.++.|+||.|+|+++++++|+++|+++...  ..+.+.+|+.|||  |+.|||+|.+
T Consensus        93 ~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~~~g~~~~~~~dpd~~G~~iEl~e~~  159 (159)
T 3gm5_A           93 TWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDFEGGRYAYIDTLRALKVMIELLENY  159 (159)
T ss_dssp             HHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEETTEEEEEESCHHHHSSEEEEEEEC
T ss_pred             hhHHHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccccCCeeEEEEeccccCcEEEEEEecC
Confidence            1000  0124578899999999999999999999988543  3578899999999  9999999864

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.93  E-value=1.9e-24  Score=130.70  Aligned_cols=120  Identities=21%  Similarity=0.279  Sum_probs=91.4

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCC----eEEEEEecCCCCCCCCCCCCCCCc
Q 032856            6 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRD   81 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~   81 (132)
                      .|++++++|+.|.|+|++++++||+++|||++......+......+++..++    ..++|+.......    .....+.
T Consensus         3 ~m~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~----~~~~~~~   78 (144)
T 2c21_A            3 HMPSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTS----YKHDEAY   78 (144)
T ss_dssp             ---CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCC----CCCCSSE
T ss_pred             CCccceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCC----CCCCCCc
Confidence            4678999999999999999999999999999876543222233456777764    5677776544221    1223567


Q ss_pred             eEEEEEECCHHHHHHHHHhCCCeEEccCCCccEE-EEeCCCCCeEEEEee
Q 032856           82 RHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAI-FTRDPDANALEFTQV  130 (132)
Q Consensus        82 ~hi~~~v~d~~~~~~~l~~~g~~~~~~~~~~~~~-~~~Dp~G~~iel~~~  130 (132)
                      .|++|.|+|+++++++|+++|+++... .+.+.+ ||.|||||.|||.+.
T Consensus        79 ~h~~f~v~d~~~~~~~l~~~G~~~~~~-~g~~~~~~~~DPdG~~iel~~~  127 (144)
T 2c21_A           79 GHIAIGVEDVKELVADMRKHDVPIDYE-DESGFMAFVVDPDGYYIELLNE  127 (144)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEE-CSSSSEEEEECTTSCEEEEEEH
T ss_pred             eEEEEEeCCHHHHHHHHHHCCCEEecc-CCcEEEEEEECCCCCEEEEEEc
Confidence            899999999999999999999998766 555565 999999999999875

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.93  E-value=5.5e-25  Score=131.87  Aligned_cols=124  Identities=23%  Similarity=0.188  Sum_probs=92.0

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   86 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   86 (132)
                      |++++++|+.|.|+|++++++||+++||+++.............+++. ++..+.|.......... ......+..|++|
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~~~~~~-~~~~~~g~~h~~f   78 (136)
T 2rk0_A            1 MSLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-GGLSIVLREHDGGGTDL-FDETRPGLDHLSF   78 (136)
T ss_dssp             -CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-TSCEEEEEEETTCSSSC-CCTTSSEEEEEEE
T ss_pred             CCCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-CCCEEEEEeCCCCcccC-CCCCCCCcceEEE
Confidence            468999999999999999999999999999876543221122334444 66678887765432111 1123356789999


Q ss_pred             EE---CCHHHHHHHHHhCCCeEEccC--CCccEEEEeCCCCCeEEEEeeCC
Q 032856           87 AI---RDVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVDG  132 (132)
Q Consensus        87 ~v---~d~~~~~~~l~~~g~~~~~~~--~~~~~~~~~Dp~G~~iel~~~~~  132 (132)
                      .|   +|+++++++|+++|+++...+  ..++.+||+|||||.|||.+..+
T Consensus        79 ~v~~~~d~~~~~~~l~~~G~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~~  129 (136)
T 2rk0_A           79 SVESMTDLDVLEERLAKAGAAFTPTQELPFGWILAFRDADNIALEAMLGRE  129 (136)
T ss_dssp             EESSHHHHHHHHHHHHHHTCCBCCCEEETTEEEEEEECTTCCEEEEEEECT
T ss_pred             EeCCHHHHHHHHHHHHHCCCcccCccccCCceEEEEECCCCCEEEEEEcCC
Confidence            99   799999999999999875432  23489999999999999998753

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.93  E-value=3.4e-24  Score=130.65  Aligned_cols=120  Identities=20%  Similarity=0.296  Sum_probs=92.7

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEE
Q 032856            5 GDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   84 (132)
Q Consensus         5 ~~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi   84 (132)
                      .++++.+++||+|.|+|++++++||+++|||++....+      ..+++..++..+.+......... .......+..|+
T Consensus        17 ~~m~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~------~~~~l~~~~~~l~l~~~~~~~~~-~~~~~~~g~~hi   89 (152)
T 3huh_A           17 IQMIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ------NRKALIFGAQKINLHQQEMEFEP-KASRPTPGSADL   89 (152)
T ss_dssp             ---CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEETT------TEEEEEETTEEEEEEETTBCCSS-CCSSCCTTCCEE
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEccC------CeEEEEeCCeEEEEeccCCcCCC-cCcCCCCCccEE
Confidence            35788999999999999999999999999999988632      35678888888888776543221 112233567899


Q ss_pred             EEEEC-CHHHHHHHHHhCCCeEEccC----C--C-ccEEEEeCCCCCeEEEEeeC
Q 032856           85 CIAIR-DVSKLKMILDKAGISYTLSK----S--G-RPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        85 ~~~v~-d~~~~~~~l~~~g~~~~~~~----~--~-~~~~~~~Dp~G~~iel~~~~  131 (132)
                      +|.++ |+++++++|+++|+++..++    .  + .+.+||.|||||.|||.+..
T Consensus        90 ~f~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~  144 (152)
T 3huh_A           90 CFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYV  144 (152)
T ss_dssp             EEEESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC-
T ss_pred             EEEecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEecc
Confidence            99997 99999999999999875422    1  1 48899999999999999875

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.93  E-value=1.4e-24  Score=128.33  Aligned_cols=118  Identities=19%  Similarity=0.278  Sum_probs=90.8

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   88 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   88 (132)
                      ++++||+|.|+|++++++||+++||++.......+..+...+|+.. ++..++++........+  .....+..|++|.|
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~--~~~~~g~~hi~~~v   79 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTGKT--TGENLGWAHIAIST   79 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEETTCCCCC--CSSCSSCCCEEEEC
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecCCCCCCC--CcCCCceEEEEEEc
Confidence            5789999999999999999999999998775332233345667776 45578887765443221  12346679999999


Q ss_pred             CC---HHHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEe
Q 032856           89 RD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        89 ~d---~~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~  129 (132)
                      +|   +++++++|+++|+++...    +.+.+.+|++|||||.|||+.
T Consensus        80 ~d~~~v~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~  127 (127)
T 3e5d_A           80 GTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEITW  127 (127)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEEC
T ss_pred             CCHHHHHHHHHHHHHcCCeEecCcccCCCCcEEEEEECCCCCEEEEeC
Confidence            99   889999999999988643    245678999999999999963

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.93  E-value=1.2e-25  Score=138.59  Aligned_cols=126  Identities=18%  Similarity=0.281  Sum_probs=96.5

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCC--CCCCCCceEE
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR--PEHGGRDRHT   84 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~hi   84 (132)
                      +++++++||+|.|+|+++|++||+++||+++......+..+...+++..++..++|+...........  ...+.++.|+
T Consensus         4 ~~~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~Hi   83 (161)
T 3oa4_A            4 EKSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIAKFIQKRGEGIHHI   83 (161)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETTEEEEEEEESSTTSHHHHHHHHHCSEEEEE
T ss_pred             cccCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCCeEEEEEeECCCCChHHHHhhcCCCCeEEE
Confidence            35789999999999999999999999999987754433344577888888888888877654321100  0123578899


Q ss_pred             EEEECCHHHHHHHHHhCCCeEEcc-C----CCccEEEE--eCCCCCeEEEEeeCC
Q 032856           85 CIAIRDVSKLKMILDKAGISYTLS-K----SGRPAIFT--RDPDANALEFTQVDG  132 (132)
Q Consensus        85 ~~~v~d~~~~~~~l~~~g~~~~~~-~----~~~~~~~~--~Dp~G~~iel~~~~~  132 (132)
                      +|.|+|+++++++|+++|+++... +    .+.+.+|+  +|||||.|||++..+
T Consensus        84 af~V~Did~~~~~l~~~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~~~  138 (161)
T 3oa4_A           84 AIGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEKKE  138 (161)
T ss_dssp             EEECSCHHHHHHHHHHTTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEECCC
T ss_pred             EEEECCHHHHHHHHHHCCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEecCC
Confidence            999999999999999999987543 2    24456666  499999999999753

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.92  E-value=6.2e-26  Score=139.01  Aligned_cols=123  Identities=15%  Similarity=0.189  Sum_probs=82.5

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCe-EEEEEecCCCCCCCC---CCCCCCCc
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAE-MIHLMELPNPDPLSG---RPEHGGRD   81 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~-~~~l~~~~~~~~~~~---~~~~~~~~   81 (132)
                      ...|+|+|+.|.|+|+++|++||+++|||++....+..  +.....+.. ++. ...+...........   ......+.
T Consensus        22 ~~~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~   99 (155)
T 4g6x_A           22 SNAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVG--ADRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGI   99 (155)
T ss_dssp             -CCCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEET--TEEEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTC
T ss_pred             cCceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCC--CceEEEEeccCCCcceEEEeccCCCccccccccccccCCc
Confidence            34568999999999999999999999999987643322  122222222 211 112211111111000   00112456


Q ss_pred             eEEEEEECCHHHHHHHHHhCCCeEEccC---CCccEEEEeCCCCCeEEEEeeC
Q 032856           82 RHTCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        82 ~hi~~~v~d~~~~~~~l~~~g~~~~~~~---~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      .|++|.|+|+++++++|+++|+++..++   ++++.+||+|||||.|||+|..
T Consensus       100 ~~l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~g~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A          100 PAASFAVDDIAAEYERLSALGVRFTQEPTDMGPVVTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             CSEEEEESCHHHHHHHHHHTTCCEEEEEEECSSCEEEEEECSSSCEEEEEEC-
T ss_pred             eEEEeeechhhhhhhHHhcCCcEEeeCCEEcCCeEEEEEECCCCCEEEEEEEC
Confidence            7999999999999999999999986432   4568899999999999999964

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.92  E-value=1.2e-23  Score=125.56  Aligned_cols=118  Identities=22%  Similarity=0.355  Sum_probs=89.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCC----eEEEEEecCCCCCCCCCCCCCCCceEEE
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTC   85 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~hi~   85 (132)
                      ++++|+.|.|+|++++++||+++||+++......+......+++..++    ..+++........    ...+.+..|++
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~~~~   76 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDK----YELGTAYGHIA   76 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCC----CCCCSSEEEEE
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCc----ccCCCCccEEE
Confidence            478999999999999999999999999876543223334556777754    5677765433221    12234678999


Q ss_pred             EEECCHHHHHHHHHhCCCeEEcc----CCCc-cEEEEeCCCCCeEEEEeeC
Q 032856           86 IAIRDVSKLKMILDKAGISYTLS----KSGR-PAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        86 ~~v~d~~~~~~~l~~~g~~~~~~----~~~~-~~~~~~Dp~G~~iel~~~~  131 (132)
                      |.|+|+++++++|+++|+++...    +.+. +.+|++||+||.|||.+..
T Consensus        77 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~  127 (135)
T 1f9z_A           77 LSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEK  127 (135)
T ss_dssp             EECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-
T ss_pred             EEeCCHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecC
Confidence            99999999999999999988643    2343 6789999999999999864

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.92  E-value=2.3e-23  Score=124.69  Aligned_cols=112  Identities=22%  Similarity=0.369  Sum_probs=90.6

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA   87 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   87 (132)
                      |+++++|+.|.|+|++++++||+++||+++....+      ..+++..++..+.+......      .....+..|++|.
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~------~~~~~~~~h~~~~   68 (135)
T 1nki_A            1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLWLCLSREPQY------GGPAADYTHYAFG   68 (135)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEEETTEEEEEEECTTC------CCCCSSSCEEEEE
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC------CceEEecCCEEEEEEeCCCC------CCCCCCcceEEEE
Confidence            47899999999999999999999999999886532      23677888877777654221      1223567899999


Q ss_pred             EC--CHHHHHHHHHhCCCeEEccC-CCccEEEEeCCCCCeEEEEeeC
Q 032856           88 IR--DVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        88 v~--d~~~~~~~l~~~g~~~~~~~-~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      |+  |+++++++|+++|+++...+ .+++.+|++||+||.|||.+..
T Consensus        69 v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  115 (135)
T 1nki_A           69 IAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEAHVGD  115 (135)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCCSSSCEEEEECTTCCEEEEESCC
T ss_pred             ccHHHHHHHHHHHHHCCCceecCCCCCeEEEEEECCCCCEEEEEECC
Confidence            98  99999999999999886543 3678999999999999998764

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.92  E-value=1.3e-23  Score=127.75  Aligned_cols=124  Identities=14%  Similarity=0.219  Sum_probs=92.6

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCC-----------CCCCceeEEEEeCC--eEEEEEecCCCCCCC-
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPH-----------DKLPYRGAWLWVGA--EMIHLMELPNPDPLS-   72 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~-----------~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~-   72 (132)
                      +++++++|+.|.|+|++++++||++ ||+++......           +......+++..++  ..++|+....+.... 
T Consensus         7 ~~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~   85 (153)
T 1ss4_A            7 NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIAD   85 (153)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCB
T ss_pred             ccccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEecCCCCccc
Confidence            5788999999999999999999999 99998754321           11233566777743  577777653322210 


Q ss_pred             --CCCCCCCCceEEEEEECCHHHHHHHHHhCCCeEEccC----CCccEEEEeCCCCCeEEEEeeC
Q 032856           73 --GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        73 --~~~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~----~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                        .......++.|++|.|+|+++++++|+++|+++..++    .+.+.+||+||+||.|||++..
T Consensus        86 ~~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           86 HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             CTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEEEC
T ss_pred             ccCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCceEEEEEECCCCCEEEEEecc
Confidence              0112235667999999999999999999999885433    4668899999999999999864

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.92  E-value=2.2e-23  Score=126.56  Aligned_cols=118  Identities=17%  Similarity=0.272  Sum_probs=90.6

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEE
Q 032856            6 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC   85 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~   85 (132)
                      ++++.+++||.|.|+|++++++||+++|||++....+      ..+++..++..+.+........+. ......+..|++
T Consensus        22 ~m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~l~~g~~~l~l~~~~~~~~~~-~~~~~~g~~~~~   94 (147)
T 3zw5_A           22 SMLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE------DRKALCFGDQKFNLHEVGKEFEPK-AAHPVPGSLDIC   94 (147)
T ss_dssp             HTSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT------TEEEEEETTEEEEEEETTSCCSSC-CSSCCTTCCEEE
T ss_pred             ceecccccEEEEEeCCHHHHHHHHHHhcCCEEEecCC------CceEEEECCcEEEEEEcCCCcCcc-cCCCCCCCceEE
Confidence            4678999999999999999999999999999986432      235678888877777654332211 112234557899


Q ss_pred             EEEC-CHHHHHHHHHhCCCeEEccC-------CCccEEEEeCCCCCeEEEEee
Q 032856           86 IAIR-DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        86 ~~v~-d~~~~~~~l~~~g~~~~~~~-------~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      |.+. |+++++++|+++|+++...+       ...+.+||+|||||.|||.++
T Consensus        95 ~~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~y  147 (147)
T 3zw5_A           95 LITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSNY  147 (147)
T ss_dssp             EECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEEC
T ss_pred             EEeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEecC
Confidence            9886 99999999999999875322       123689999999999999874

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.92  E-value=2.8e-23  Score=125.13  Aligned_cols=115  Identities=23%  Similarity=0.366  Sum_probs=91.6

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA   87 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   87 (132)
                      |+++++||.|.|+|++++++||+++||+++....+      ..+++..++..+.+........   ......+..|++|.
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~~---~~~~~~~~~hi~~~   71 (141)
T 1npb_A            1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDLWVCLSYDEARQY---VPPQESDYTHYAFT   71 (141)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET------TEEEEEETTEEEEEEECTTCCC---CCGGGSCSCEEEEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC------CcEEEEECCEEEEEEECCCCCC---CCCCCCCceEEEEE
Confidence            46899999999999999999999999999887543      2367888887777776542211   12223557899999


Q ss_pred             EC--CHHHHHHHHHhCCCeEEccC-CCccEEEEeCCCCCeEEEEeeC
Q 032856           88 IR--DVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        88 v~--d~~~~~~~l~~~g~~~~~~~-~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      |+  |+++++++|+++|+++...+ .+++.+|++||+||.|||.+.+
T Consensus        72 v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           72 VAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEECCCSSSEEEEEECTTCCEEEEEECC
T ss_pred             eCHHHHHHHHHHHHHCCCeEeccCCCceeEEEEECCCCCEEEEEECc
Confidence            97  99999999999999876543 4678999999999999999864

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.92  E-value=1.8e-23  Score=131.46  Aligned_cols=125  Identities=15%  Similarity=0.199  Sum_probs=93.5

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCC-------------------eEEEEEecCC
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-------------------EMIHLMELPN   67 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~l~~~~~   67 (132)
                      ....+++||+|.|+|++++++||+++|||+..............+++..++                   ..++++....
T Consensus        30 ~~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  109 (187)
T 3vw9_A           30 TKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWG  109 (187)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETT
T ss_pred             cceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecC
Confidence            455799999999999999999999999999987655444455666666543                   4677754432


Q ss_pred             CCCCC-CC----CCCCCCceEEEEEECCHHHHHHHHHhCCCeEEccC---CCccEEEEeCCCCCeEEEEeeC
Q 032856           68 PDPLS-GR----PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        68 ~~~~~-~~----~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~---~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      ..... ..    .....+..|++|.|+|+++++++|+++|+++...+   ...+.+||+|||||.|||++..
T Consensus       110 ~~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  181 (187)
T 3vw9_A          110 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  181 (187)
T ss_dssp             GGGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEECGG
T ss_pred             CCCCCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCcceEEEEECCCCCEEEEEEcc
Confidence            21111 01    11224778999999999999999999999987654   2345689999999999999864

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.91  E-value=3.7e-23  Score=123.40  Aligned_cols=119  Identities=19%  Similarity=0.146  Sum_probs=89.3

Q ss_pred             CCCCCCceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEecCCCCCCCCCCCCCC
Q 032856            1 MSVEGDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGG   79 (132)
Q Consensus         1 m~~~~~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~   79 (132)
                      |+.... ++.+++||.|.|+|++++++||+++|||++....+      ..+.+.. ++..+.++....+     ......
T Consensus         4 m~~~~~-~~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~l~l~~~~~~-----~~~~~~   71 (132)
T 3sk2_A            4 MTDLAG-PTITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP------RYVAFPSSGDALFAIWSGGEE-----PVAEIP   71 (132)
T ss_dssp             CCCCCC-CCCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS------SEEEEECSTTCEEEEESSSCC-----CCTTSC
T ss_pred             cccCCC-CcceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC------CEEEEEcCCCcEEEEEeCCCC-----CcCCCC
Confidence            454333 34799999999999999999999999999876543      2344554 3467777665421     112235


Q ss_pred             CceEEEEEECC---HHHHHHHHHh---CCCeEEccC---CCccEEEEeCCCCCeEEEEeeC
Q 032856           80 RDRHTCIAIRD---VSKLKMILDK---AGISYTLSK---SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        80 ~~~hi~~~v~d---~~~~~~~l~~---~g~~~~~~~---~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      +..|++|.|+|   +++++++|++   +|+++..++   ..++.++|.|||||.|||.+.+
T Consensus        72 ~~~~~~~~v~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g~~~~~~DPdGn~iel~~~d  132 (132)
T 3sk2_A           72 RFSEIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTFLISDPDGHIIRVCPLD  132 (132)
T ss_dssp             CCEEEEEEESSHHHHHHHHHHHHHCSSSCCEEEEEEEEETTEEEEEEECTTCCEEEEEECC
T ss_pred             CcceEEEEeCCHHHHHHHHHHHHhhhcCCCEEeeCCcccCceEEEEEECCCCCEEEEEeCC
Confidence            56899999986   9999999999   999886432   2338999999999999999864

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.91  E-value=3.1e-23  Score=123.61  Aligned_cols=116  Identities=16%  Similarity=0.263  Sum_probs=87.5

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCC-ceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   86 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   86 (132)
                      |+++++|+.|.|+|++++++||+++||+++....+..... ....++..++..+.+.......        ..+..|++|
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--------~~~~~h~~~   72 (133)
T 2p7o_A            1 MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDSLQ--------ERTYNHIAF   72 (133)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEECC-----CCCSSCEEEEEETTEEEEEEECSSCC--------CCCSCEEEE
T ss_pred             CCceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecCCcccccCCceEEEeCCEEEEEecCCCCC--------CCCeeEEEE
Confidence            4689999999999999999999999999987653311100 0112677777777776532211        255789999


Q ss_pred             EEC--CHHHHHHHHHhCCCeEEccC----CCccEEEEeCCCCCeEEEEeeC
Q 032856           87 AIR--DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        87 ~v~--d~~~~~~~l~~~g~~~~~~~----~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      .|+  |+++++++|+++|+++..++    .+++.+|++||+||.|||.+.+
T Consensus        73 ~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  123 (133)
T 2p7o_A           73 QIQSEEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGT  123 (133)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCEECCCCCCTTCCCEEEEECSSSCEEEEECSS
T ss_pred             EcCHHHHHHHHHHHHHCCCcccCCCccCCCCeeEEEEECCCCCEEEEEcCC
Confidence            995  99999999999999987543    3568999999999999999864

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.91  E-value=1.5e-23  Score=126.01  Aligned_cols=116  Identities=15%  Similarity=0.253  Sum_probs=88.2

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCC-ceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   86 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   86 (132)
                      |+++++|+.|.|+|++++++||+++||+++....+..... ....++..++..+.+......      +  ..+..|++|
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~------~--~~~~~h~~~   72 (139)
T 1r9c_A            1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKL------A--ERSYNHIAF   72 (139)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCCC------S--SCCSCEEEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCCccccccceEEEEECCEEEEEEeCCCC------C--CCCeeEEEE
Confidence            4789999999999999999999999999987653311100 011267778777777653221      1  246789999


Q ss_pred             EEC--CHHHHHHHHHhCCCeEEccC----CCccEEEEeCCCCCeEEEEeeC
Q 032856           87 AIR--DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        87 ~v~--d~~~~~~~l~~~g~~~~~~~----~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      .|+  |+++++++|+++|+++..++    .+.+.+||+|||||.|||.+.+
T Consensus        73 ~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  123 (139)
T 1r9c_A           73 KIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTGT  123 (139)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECCC
T ss_pred             EcCHHHHHHHHHHHHHCCCcccCCcccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            999  99999999999999876542    3678999999999999999753

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.91  E-value=1.7e-23  Score=124.50  Aligned_cols=120  Identities=22%  Similarity=0.270  Sum_probs=89.2

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCceE
Q 032856            6 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRH   83 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~h   83 (132)
                      .+++++++|+.|.|+|++++++||+++||+++........ +...+.+..++  ..+.+.......    .....++..|
T Consensus         8 ~~m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~l~l~~~~~~~----~~~~~~~~~~   82 (133)
T 4hc5_A            8 SLMIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDP-NMRFVTVVPPGAQTQVALGLPSWYE----DGRKPGGYTG   82 (133)
T ss_dssp             CCSCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEET-TEEEEEEECTTCSCEEEEECGGGCS----SCCCSCEEEE
T ss_pred             cccccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCC-CceEEEEECCCCceEEEEecCcccc----cccCCCCeEE
Confidence            4678999999999999999999999999999987543111 12333344432  356666544211    1112256789


Q ss_pred             EEEEECCHHHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEee
Q 032856           84 TCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        84 i~~~v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      ++|.|+|+++++++|+++|+++..+    +.+.+.++++||+||.|||.|.
T Consensus        83 ~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~el~ee  133 (133)
T 4hc5_A           83 ISLITRDIDEAYKTLTERGVTFTKPPEMMPWGQRATWFSDPDGNQFFLVEE  133 (133)
T ss_dssp             EEEEESCHHHHHHHHHHTTCEESSSCEECTTSCEEEEEECTTCEEEEEEEC
T ss_pred             EEEEeCCHHHHHHHHHHCCCEeecCCCcCCCCCEEEEEECCCCCEEEEEeC
Confidence            9999999999999999999988643    2455899999999999999873

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.91  E-value=3.5e-24  Score=131.83  Aligned_cols=121  Identities=17%  Similarity=0.310  Sum_probs=92.9

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCC----CCCCCCCCCc
Q 032856            6 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL----SGRPEHGGRD   81 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~   81 (132)
                      ++++.+++||+|.|+|++++++||+++||+++......     ..+++..++..+.++.......+    ........+.
T Consensus         3 m~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~g~   77 (160)
T 3r4q_A            3 MKPPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG-----QLVFFKCGRQMLLLFDPQESSRADANNPIPRHGAVGQ   77 (160)
T ss_dssp             -CCCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT-----TEEEEEETTEEEEEECHHHHTCCCTTCCSCCCEEEEE
T ss_pred             ccccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC-----cEEEEeCCCEEEEEEecCCccCccccCCCCcCCCcce
Confidence            56789999999999999999999999999999875431     35677778777766654322110    0111223456


Q ss_pred             eEEEEEE---CCHHHHHHHHHhCCCeEEcc---CCCccEEEEeCCCCCeEEEEeeC
Q 032856           82 RHTCIAI---RDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        82 ~hi~~~v---~d~~~~~~~l~~~g~~~~~~---~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      .|++|.|   +|+++++++|+++|+++...   +.+.+.+|++|||||.|||.+.+
T Consensus        78 ~hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  133 (160)
T 3r4q_A           78 GHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIRDPAGNSVEVGEGK  133 (160)
T ss_dssp             CEEEEEESSHHHHHHHHHHHHTTTCCCCEEEECTTSCEEEEEECTTCCEEEEEEGG
T ss_pred             eEEEEEeCCHHHHHHHHHHHHHCCCEEeccccccCCcEEEEEECCCCCEEEEEeCC
Confidence            8999999   89999999999999987532   34789999999999999999864

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.91  E-value=3.1e-24  Score=129.86  Aligned_cols=125  Identities=15%  Similarity=0.251  Sum_probs=92.4

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCC------eEEEEEecCCCCCCCCC--CCCC
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA------EMIHLMELPNPDPLSGR--PEHG   78 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~~~~~~~~~~--~~~~   78 (132)
                      .++.+++|+.|.|+|++++++||+++|||++......+..+...+++..++      ..++|+...........  ...+
T Consensus         5 ~m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~   84 (148)
T 1jc4_A            5 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHN   84 (148)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTT
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCC
Confidence            357899999999999999999999999999876543222334567788876      67888776543211000  0112


Q ss_pred             --CCceEEEEEECCHHHHHHHHHhCCCeEE-ccC----CCccEEEE--eCCCCCeEEEEeeC
Q 032856           79 --GRDRHTCIAIRDVSKLKMILDKAGISYT-LSK----SGRPAIFT--RDPDANALEFTQVD  131 (132)
Q Consensus        79 --~~~~hi~~~v~d~~~~~~~l~~~g~~~~-~~~----~~~~~~~~--~Dp~G~~iel~~~~  131 (132)
                        .+..|++|.|+|+++++++|+++|+++. ..+    .+.+.+|+  +|||||.|||++.+
T Consensus        85 ~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           85 GRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             TCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCCceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCCceEEEEEeecCCCcEEEEEEecC
Confidence              4578999999999999999999999876 222    24455666  99999999999875

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.91  E-value=5.3e-23  Score=125.15  Aligned_cols=116  Identities=18%  Similarity=0.185  Sum_probs=84.9

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEecCCCCCCCCCCCCCCCceEEE
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTC   85 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~   85 (132)
                      +++++++||.|.|+|++++++||+++||+++....+      ..+++.. ++..+.++........   .....+..|++
T Consensus         2 ~m~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~~~~~~g~~l~l~~~~~~~~~---~~~~~~~~~l~   72 (148)
T 3rhe_A            2 VMLSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP------TFAMFVMKTGLRLGLWAQEEIEPK---AHQTGGGMELS   72 (148)
T ss_dssp             -----CEEEEEEESCHHHHHHHHHHHHTCCCSEECS------SEEEEECTTSCEEEEEEGGGCSSC---CC----CEEEE
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC------CEEEEEcCCCcEEEEecCCcCCcc---ccCCCCeEEEE
Confidence            357899999999999999999999999999877533      3466776 5667777665432211   12234467999


Q ss_pred             EEECC---HHHHHHHHHhCCCeEEccC---CCccEEEEeCCCCCeEEEEeeC
Q 032856           86 IAIRD---VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        86 ~~v~d---~~~~~~~l~~~g~~~~~~~---~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      |.|+|   +++++++|+++|+++..++   ..++.++|+|||||.|||.+..
T Consensus        73 f~v~d~~dvd~~~~~l~~~G~~i~~~p~~~~~G~~~~~~DPdG~~iel~~~~  124 (148)
T 3rhe_A           73 FQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYTFVGVDPDEHRLRIFCLK  124 (148)
T ss_dssp             EECSCHHHHHHHHHHHHHTTCCEEEEEEEETTEEEEEEECTTCCEEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHHHhCCCEEEeCCeecCCCcEEEEECCCCCEEEEEEcC
Confidence            99987   9999999999999885432   2248899999999999999875

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.91  E-value=5e-23  Score=124.23  Aligned_cols=110  Identities=28%  Similarity=0.465  Sum_probs=86.4

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCceE
Q 032856            6 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRH   83 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~h   83 (132)
                      +|++.+++||.|.|+|++++++||+++|||++....+.    ...+++..++  ..+.+......          .+..|
T Consensus        23 ~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~----~~~~~~~~~~~~~~l~l~~~~~~----------~~~~h   88 (141)
T 3ghj_A           23 PMNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSA----RRWNFLWVSGRAGMVVLQEEKEN----------WQQQH   88 (141)
T ss_dssp             ---CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETT----TTEEEEEETTTTEEEEEEECCSS----------CCCCE
T ss_pred             ceeeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCC----CcEEEEEecCCCcEEEEeccCCC----------CCCce
Confidence            46789999999999999999999999999999876431    1356677764  46666654221          44689


Q ss_pred             EEEEEC--CHHHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEe
Q 032856           84 TCIAIR--DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        84 i~~~v~--d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~  129 (132)
                      ++|.|+  |+++++++|+++|+++..+    ..+.+.+||+|||||.|||++
T Consensus        89 ~~~~v~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           89 FSFRVEKSEIEPLKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             EEEEECGGGHHHHHHHHHHTTCCCEEEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             EEEEEeHHHHHHHHHHHHHCCCeEeCCcccCCCCceEEEEECCCCCEEEEEE
Confidence            999998  9999999999999987632    135689999999999999986

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.91  E-value=7.5e-23  Score=122.26  Aligned_cols=115  Identities=22%  Similarity=0.242  Sum_probs=86.7

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEE
Q 032856            6 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC   85 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~   85 (132)
                      |+..++++||+|.|+|++++++||+++|||++....+      ..+.+..++..+.+........    + ...+..|++
T Consensus         4 m~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~g~~~~l~~~~~~~~----~-~~~~~~h~~   72 (135)
T 3rri_A            4 MRNPNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP------DRITLDFFGDQLVCHLSDRWDR----E-VSMYPRHFG   72 (135)
T ss_dssp             CCCTTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETTEEEEEEECSCSCS----S-CCSSSCEEE
T ss_pred             ccCCCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC------CcEEEEEeCCEEEEEEcCcccc----c-CCCCCCeEE
Confidence            3446789999999999999999999999999966433      2355665555566655433221    1 224567999


Q ss_pred             EEEC---CHHHHHHHHHhCCCeEEcc--------CCCccEEEEeCCCCCeEEEEeeC
Q 032856           86 IAIR---DVSKLKMILDKAGISYTLS--------KSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        86 ~~v~---d~~~~~~~l~~~g~~~~~~--------~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      |.++   |+++++++|+++|+++..+        +.+.+.+||+|||||.|||.++.
T Consensus        73 ~~~~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~  129 (135)
T 3rri_A           73 ITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYF  129 (135)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEES
T ss_pred             EEEcChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEEC
Confidence            9996   5999999999999987432        23357899999999999999874

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.91  E-value=7.9e-24  Score=128.88  Aligned_cols=119  Identities=17%  Similarity=0.123  Sum_probs=90.0

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCC-CCCCCceEEE
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRP-EHGGRDRHTC   85 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~hi~   85 (132)
                      ||+.+++|+.|.|+|++++++||+++||+++....+      ..+++..++..+.|............+ ....+..|++
T Consensus         1 MM~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~   74 (150)
T 3bqx_A            1 MSLQQVAVITLGIGDLEASARFYGEGFGWAPVFRNP------EIIFYQMNGFVLATWLVQNLQEDVGVAVTSRPGSMALA   74 (150)
T ss_dssp             --CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEECS------SEEEEECSSSEEEEEEHHHHHHHHSSCCCSSCCSCEEE
T ss_pred             CCccceEEEEEEcCCHHHHHHHHHHhcCCEeecCCC------CEEEEEcCCEEEEEEeccccccccCCCCCCCCCeEEEE
Confidence            456799999999999999999999999999876531      456777777788887653210000000 1124568999


Q ss_pred             EEE---CCHHHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEeeC
Q 032856           86 IAI---RDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        86 ~~v---~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      |.|   +|+++++++|+++|+++..+    +.+.+.+||+|||||.|||.+.+
T Consensus        75 f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  127 (150)
T 3bqx_A           75 HNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGLRGYVADPDGHIWEIAFNP  127 (150)
T ss_dssp             EECSSGGGHHHHHHHHHHTTCEEEEEEECCTTSSEEEEEECTTCCEEEEEECT
T ss_pred             EEeCCHHHHHHHHHHHHHCCCEEecCCcccCCCCEEEEEECCCCCEEEEEeCC
Confidence            999   89999999999999987543    23568999999999999999865

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.91  E-value=5.9e-23  Score=128.85  Aligned_cols=126  Identities=16%  Similarity=0.203  Sum_probs=90.3

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeC-------------------CeEEEEEecC
Q 032856            6 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-------------------AEMIHLMELP   66 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~l~~~~   66 (132)
                      .+.+++++|+.|.|+|++++++||+++|||++.............+++..+                   +..++|+...
T Consensus        26 ~~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~  105 (184)
T 2za0_A           26 STKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNW  105 (184)
T ss_dssp             GGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEET
T ss_pred             CccceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecC
Confidence            356789999999999999999999999999987653322222233444432                   3467776643


Q ss_pred             CCC-CCCCCC----CCCCCceEEEEEECCHHHHHHHHHhCCCeEEccC---CCccEEEEeCCCCCeEEEEeeC
Q 032856           67 NPD-PLSGRP----EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        67 ~~~-~~~~~~----~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~---~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      ... ......    ....+..|++|.|+|+++++++|+++|+++...+   .+.+.+||+|||||.|||++..
T Consensus       106 ~~~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~~~~~~~~DPdG~~iel~~~~  178 (184)
T 2za0_A          106 GTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  178 (184)
T ss_dssp             TGGGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEECTT
T ss_pred             CCCCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCceeEEEEECCCCCEEEEEecC
Confidence            311 110000    1124678999999999999999999999986543   2356899999999999999864

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.90  E-value=2.2e-22  Score=119.61  Aligned_cols=114  Identities=19%  Similarity=0.267  Sum_probs=81.6

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEE-eCCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW-VGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   86 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   86 (132)
                      +...++||.|.|+|++++++||++ |||++...... ..  ..+++. .++..+.+.......      ....+..|++|
T Consensus         3 ~~~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~-~~--~~~~~~~~~~~~l~l~~~~~~~------~~~~~~~~l~f   72 (128)
T 3g12_A            3 LSLLITSITINTSHLQGMLGFYRI-IGFQFTASKVD-KG--SEVHRAVHNGVEFSLYSIQNPQ------RSQIPSLQLGF   72 (128)
T ss_dssp             -CEEEEEEEEEESCHHHHHHHHHH-HTCCCEEC--------CCEEEEEETTEEEEEEECCCCS------SCCCCSEEEEE
T ss_pred             ccceEEEEEEEcCCHHHHHHHHHH-CCCEEecccCC-CC--CEEEEEeCCCeEEEEEECCCCc------CCCCCceEEEE
Confidence            456899999999999999999999 99998765221 11  235565 577777775433211      11233468999


Q ss_pred             EECCHHHHHHHHHhCCCe-EEcc----CCCccEEEEeCCCCCeEEEEeeCC
Q 032856           87 AIRDVSKLKMILDKAGIS-YTLS----KSGRPAIFTRDPDANALEFTQVDG  132 (132)
Q Consensus        87 ~v~d~~~~~~~l~~~g~~-~~~~----~~~~~~~~~~Dp~G~~iel~~~~~  132 (132)
                      .|+|+++++++++++|++ +..+    +.|.+ ++|+|||||.|||.+.++
T Consensus        73 ~v~dvd~~~~~l~~~G~~~~~~~p~~~~~G~~-~~~~DPdGn~iel~~~~~  122 (128)
T 3g12_A           73 QITDLEKTVQELVKIPGAMCILDPTDMPDGKK-AIVLDPDGHSIELCELEG  122 (128)
T ss_dssp             EESCHHHHHHHHTTSTTCEEEEEEEECC-CEE-EEEECTTCCEEEEEC---
T ss_pred             EeCCHHHHHHHHHHCCCceeccCceeCCCccE-EEEECCCCCEEEEEEecc
Confidence            999999999999999999 6432    24555 999999999999998753

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.90  E-value=7.6e-22  Score=116.54  Aligned_cols=109  Identities=11%  Similarity=0.119  Sum_probs=85.1

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   88 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   88 (132)
                      .....|+.|.|+|++++++||+++||+++....+      ..+++..++..+++.......        .++..|++|.|
T Consensus         3 ~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~--------~~~~~~~~~~v   68 (124)
T 1xrk_A            3 KLTSAVPVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDDVTLFISAVQDQV--------VPDNTQAWVWV   68 (124)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCTT--------TGGGCEEEEEE
T ss_pred             cccceeEEEEcCCHHHHHHHHHHccCceEEecCC------CEEEEEECCEEEEEEcCCCCC--------CCCceEEEEEE
Confidence            3567899999999999999999999999987521      345677787777776543211        13346999999


Q ss_pred             CCHHHHHHHHHhC------CC--eEEccC---CCccEEEEeCCCCCeEEEEeeC
Q 032856           89 RDVSKLKMILDKA------GI--SYTLSK---SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        89 ~d~~~~~~~l~~~------g~--~~~~~~---~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      +|+++++++|+++      |+  ++..++   ..++.++++|||||.|||.+..
T Consensus        69 ~dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           69 RGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             ECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETTEEEEEEECTTCCEEEEEEC-
T ss_pred             CCHHHHHHHHHHhcccccCCccccccCCceecCCCCEEEEECCCCCEEEEEEec
Confidence            9999999999999      99  765432   2238999999999999999863

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.90  E-value=2e-22  Score=117.86  Aligned_cols=112  Identities=17%  Similarity=0.211  Sum_probs=83.8

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   88 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   88 (132)
                      .++++|+.|.|+|++++++||+++||+++....+      ..+++..++..+.+..  ....+ . ...+. ..|++|.|
T Consensus         3 ~m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~l~l~~--~~~~~-~-~~~~~-~~~~~~~v   71 (118)
T 2i7r_A            3 AMNLNQLDIIVSNVPQVCADLEHILDKKADYAND------GFAQFTIGSHCLMLSQ--NHLVP-L-ENFQS-GIIIHIEV   71 (118)
T ss_dssp             -CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET------TEEEEEETTEEEEEES--SCSSS-C-CCCCS-CEEEEEEC
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC------CEEEEEeCCeEEEEEc--CCCCC-c-ccCCC-eEEEEEEE
Confidence            3689999999999999999999999999875422      2466777776654422  11111 0 11122 35899999


Q ss_pred             CCHHHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEeeC
Q 032856           89 RDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        89 ~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      +|+++++++|+++|+++..+    +.+.+.++++|||||.|||++.+
T Consensus        72 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  118 (118)
T 2i7r_A           72 EDVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRMK  118 (118)
T ss_dssp             SCHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEECC
T ss_pred             CCHHHHHHHHHHCCCceecCCccccCccEEEEEECCCccEEEEEecC
Confidence            99999999999999987432    34568999999999999999853

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.89  E-value=3.1e-22  Score=121.20  Aligned_cols=115  Identities=16%  Similarity=0.232  Sum_probs=87.9

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeC-CeEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIA   87 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   87 (132)
                      ++++.|+.|.|+|++++++||+++||+++....+      ..+++..+ +..+.|+......+   ......+..|++|.
T Consensus        23 m~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~~l~l~~~~~~~~---~~~~~~~~~hl~f~   93 (144)
T 2kjz_A           23 MTHPDFTILYVDNPPASTQFYKALLGVDPVESSP------TFSLFVLANGMKLGLWSRHTVEP---KASVTGGGGELAFR   93 (144)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHHHTCCCSEEET------TEEEEECTTSCEEEEEETTSCSS---CCCCSSSSCEEEEE
T ss_pred             cCceeEEEEEeCCHHHHHHHHHHccCCEeccCCC------CeEEEEcCCCcEEEEEeCCCCCC---ccCCCCCceEEEEE
Confidence            4599999999999999999999999999876532      23567775 45677765433211   11223567899999


Q ss_pred             EC---CHHHHHHHHHhCCCeEEccC---CCccEEEEeCCCCCeEEEEeeCC
Q 032856           88 IR---DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVDG  132 (132)
Q Consensus        88 v~---d~~~~~~~l~~~g~~~~~~~---~~~~~~~~~Dp~G~~iel~~~~~  132 (132)
                      |+   |+++++++|+++|+++..++   ..++.+||+|||||.|||.+..+
T Consensus        94 v~d~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~g  144 (144)
T 2kjz_A           94 VENDAQVDETFAGWKASGVAMLQQPAKMEFGYTFTAADPDSHRLRVYAFAG  144 (144)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCCCSCCEEETTEEEEEECCTTCCEEEEEEECC
T ss_pred             eCCHHHHHHHHHHHHHCCCeEecCceecCCceEEEEECCCCCEEEEEecCC
Confidence            98   57999999999999875432   23488999999999999998764

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.89  E-value=2.2e-22  Score=120.84  Aligned_cols=118  Identities=20%  Similarity=0.258  Sum_probs=87.3

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEecCCCC--CCCCCCCCCCCceEEE
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPD--PLSGRPEHGGRDRHTC   85 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~--~~~~~~~~~~~~~hi~   85 (132)
                      +++++|+.|.|+|++++++||++ |||++....+..    ..+.+.. ++..+.+.......  .+...+....+..|++
T Consensus         2 ~~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~~----~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~   76 (138)
T 2a4x_A            2 SARISLFAVVVEDMAKSLEFYRK-LGVEIPAEADSA----PHTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIA   76 (138)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGGGC----SEEEEECTTSCEEEEEEHHHHHHHCTTCCCCBSSCSEEEE
T ss_pred             cceeeEEEEEECCHHHHHHHHHH-cCCcEEecCCCC----ceEEEEcCCCeEEEEecCccchhhCcccCCCCCCCeEEEE
Confidence            57899999999999999999998 999987654311    2344555 55677776532100  0000112235678999


Q ss_pred             EEEC---CHHHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEeeC
Q 032856           86 IAIR---DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        86 ~~v~---d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      |.|+   |+++++++|+++|+++..+    +.+.+.+||+|||||.|||.+..
T Consensus        77 f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           77 FEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEECTTCCEEEEEEEC
T ss_pred             EEeCCHHHHHHHHHHHHHCCCceeeCCcccCCCcEEEEEECCCCCEEEEEeCC
Confidence            9999   9999999999999987543    34568999999999999999875

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.89  E-value=4.3e-22  Score=119.93  Aligned_cols=121  Identities=18%  Similarity=0.149  Sum_probs=84.7

Q ss_pred             CCCCCCceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecC-----CCCCCCCCC
Q 032856            1 MSVEGDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELP-----NPDPLSGRP   75 (132)
Q Consensus         1 m~~~~~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~   75 (132)
                      |+.+.+.   +++|+.|.|+|++++++||+++|||++......+    ..+++..++..+.+....     .....  ..
T Consensus         1 m~~~~M~---~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~----~~~~~~~~~~~l~l~~~~~~~~~~~~~~--~~   71 (141)
T 2rbb_A            1 MSLKNMA---DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSP----IFRGLDTGKSCIGFNAHEAYELMQLAQF--SE   71 (141)
T ss_dssp             ----CCC---EEEEEEEECSCHHHHHHHHHHHHCCEECGGGCBT----TEEEEECSSSEEEEECTHHHHHTTCGGG--CC
T ss_pred             CChHHcC---cccEEEEEECCHHHHHHHHHHhcCCeeecccCCC----ceEEeecCCEEEEEcCcccccccccccc--CC
Confidence            6654432   9999999999999999999999999987643211    234566666666654321     11000  01


Q ss_pred             CCCCCceEEEEEEC---CHHHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEeeC
Q 032856           76 EHGGRDRHTCIAIR---DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        76 ~~~~~~~hi~~~v~---d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      ..+.+ .|++|.|+   |+++++++|+++|+++..+    +.+.+.+||+|||||.|||.+..
T Consensus        72 ~~~~~-~~~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  133 (141)
T 2rbb_A           72 TSGIK-FLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWYQAVLLDPERNVFRINNVL  133 (141)
T ss_dssp             CBSCC-EEEEEECSCHHHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             CCCCe-EEEEEEcCCHHHHHHHHHHHHHcCCeEecCccccCCccEEEEEECCCCCEEEEEEcc
Confidence            11233 59999999   5999999999999987543    24678999999999999999864

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.89  E-value=5.4e-22  Score=120.37  Aligned_cols=120  Identities=19%  Similarity=0.241  Sum_probs=90.0

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHH---HhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCc
Q 032856            5 GDYGVVSVHHVGILCENLERSLEFY---QNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRD   81 (132)
Q Consensus         5 ~~~~~~~~~hv~i~v~d~~~~~~fy---~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   81 (132)
                      +.+++.+++|+.|.|+|++++++||   +++|||++....+.     ...|+. ++..+.|+................+.
T Consensus        14 ~~~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~-----~~~~~~-g~~~l~l~~~~~~~~~~~~~~~~~g~   87 (146)
T 3ct8_A           14 NLYFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR-----GKSYKH-GKTYLVFVQTEDRFQTPTFHRKRTGL   87 (146)
T ss_dssp             CTTTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETT-----EEEEEE-TTEEEEEEECCGGGSCSCCCTTSSSC
T ss_pred             ccccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCC-----CceEec-CCeEEEEEEcCCCcccccccccCCCc
Confidence            4567889999999999999999999   99999998875431     124555 77778887654310000001122456


Q ss_pred             eEEEEEEC---CHHHHHHHHHhCCCeEEcc-C------CCccEEEEeCCCCCeEEEEee
Q 032856           82 RHTCIAIR---DVSKLKMILDKAGISYTLS-K------SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        82 ~hi~~~v~---d~~~~~~~l~~~g~~~~~~-~------~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      .|++|.|+   |+++++++|+++|+++..+ +      .+.+.+||+|||||.|||++.
T Consensus        88 ~hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           88 NHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             eEEEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            89999999   9999999999999988652 2      135789999999999999863

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.89  E-value=3.2e-22  Score=117.06  Aligned_cols=111  Identities=18%  Similarity=0.199  Sum_probs=81.1

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCe-EEEEEecCCCCCCCCCCCCCCCceEE
Q 032856            6 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHT   84 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~hi   84 (132)
                      .|.+.++ |+.|.|+|++++++||+++||+++....     + ..+++..++. .+.+.......       ......|+
T Consensus         3 ~m~i~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~-----~-~~~~~~~~~~~~~~l~l~~~~~-------~~~~~~~~   68 (119)
T 2pjs_A            3 HMAVRRV-VANIATPEPARAQAFYGDILGMPVAMDH-----G-WIVTHASPLEAHAQVSFAREGG-------SGTDVPDL   68 (119)
T ss_dssp             --CEEEE-EEEEECSCGGGGHHHHTTTTCCCEEEEC-----S-SEEEEEEEEEEEEEEEEESSSB-------TTBCCCSE
T ss_pred             ccceeEE-EEEEEcCCHHHHHHHHHHhcCCEEEecC-----C-EEEEEecCCCCcEEEEEEcCCC-------CCCceeEE
Confidence            3567888 9999999999999999999999987641     1 2334555421 23332222211       11345799


Q ss_pred             EEEECCHHHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEee
Q 032856           85 CIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        85 ~~~v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      +|.|+|+++++++|+++|+++..+    +.+.+.+|++||+||.|||.+.
T Consensus        69 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           69 SIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             EEEESCHHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             EEEECCHHHHHHHHHHCCCccccCCccCCCccEEEEEECCCCCEEEEEec
Confidence            999999999999999999986432    2456899999999999999975

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.88  E-value=4.2e-22  Score=120.68  Aligned_cols=114  Identities=14%  Similarity=0.241  Sum_probs=83.7

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   86 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   86 (132)
                      |.+.++. +.|.|+|++++++||+++||+++..+...+....  .....++  ++++.......      ...+..|++|
T Consensus         3 M~i~~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~--~~~~~~~--~~l~~~~~~~~------~~~~~~hl~f   71 (144)
T 3r6a_A            3 MKILQIL-SRLYVADLNPALEFYEELLETPVAMRFEIPQTGV--ELAQIST--ILLIAGSEEAL------KPFRNTQATF   71 (144)
T ss_dssp             CCEEEEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSC--EEEEETT--EEEEESCHHHH------GGGGGCCEEE
T ss_pred             EEEEEEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccE--EEEEecc--EEEecCCcccC------CCCcceEEEE
Confidence            5577888 9999999999999999999999877644222222  2234444  44544321110      0123479999


Q ss_pred             EECCHHHHHHHHHhCCCeEEccC---CCccEEEEeCCCCCeEEEEeeC
Q 032856           87 AIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        87 ~v~d~~~~~~~l~~~g~~~~~~~---~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      .|+|+++++++|+++|+++..++   ..++.+||+|||||.|||++..
T Consensus        72 ~V~d~d~~~~~l~~~G~~v~~~p~~~~~G~~~~~~DPdG~~iel~~~~  119 (144)
T 3r6a_A           72 LVDSLDKFKTFLEENGAEIIRGPSKVPTGRNMTVRHSDGSVIEYVEHS  119 (144)
T ss_dssp             EESCHHHHHHHHHHTTCEEEEEEEEETTEEEEEEECTTSCEEEEEEEC
T ss_pred             EeCCHHHHHHHHHHcCCEEecCCccCCCceEEEEECCCCCEEEEEEcC
Confidence            99999999999999999876432   3348899999999999999875

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.88  E-value=3.4e-21  Score=115.41  Aligned_cols=115  Identities=19%  Similarity=0.237  Sum_probs=86.0

Q ss_pred             eeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCce-EEEEEECCH
Q 032856           13 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDR-HTCIAIRDV   91 (132)
Q Consensus        13 ~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-hi~~~v~d~   91 (132)
                      ..+.|.|+|++++++||+++||+++....+.+ .....+.+..++..+.+.........   ...++... |++|.|+|+
T Consensus         4 ~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~~~~l~l~~~~~~~~~---~~~~~~~~~~~~~~v~dv   79 (137)
T 3itw_A            4 MVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTGGGIVMVRRTGEPYTV---SCAGGHTCKQVIVWVSDV   79 (137)
T ss_dssp             CEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECSSSEEEEEETTCCSSC---EECCCCCCCEEEEEESCH
T ss_pred             EEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecCCeEEEEEecCCCcCc---cCCCCCcEEEEEEEeCCH
Confidence            46899999999999999999999998754433 22345556777777777654322111   11112234 999999999


Q ss_pred             HHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEeeC
Q 032856           92 SKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        92 ~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      ++++++|+++|+++..+    +.+.+.++|+|||||.|||.+..
T Consensus        80 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  123 (137)
T 3itw_A           80 DEHFMRSTAAGADIVQPLQDKPWGLRQYLVRDLEGHLWEFTRHL  123 (137)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEETTTEEEEEEECSSSCEEEEEECC
T ss_pred             HHHHHHHHHcCCeeccCccccCCCcEEEEEECCCCCEEEEEEEc
Confidence            99999999999987543    34668999999999999999863

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.88  E-value=4.3e-21  Score=116.56  Aligned_cols=122  Identities=13%  Similarity=0.112  Sum_probs=80.6

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCC---CCCCCCCCCCCCCce
Q 032856            6 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN---PDPLSGRPEHGGRDR   82 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~   82 (132)
                      |.+..++.||+|.|+|+++|++||++ ||+........+.   ...+...++..+.+.....   ............+..
T Consensus         4 m~~~~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
T 4gym_A            4 MASQSRLTFVNLPVADVAASQAFFGT-LGFEFNPKFTDES---CACMVVSEQAFVMLIDRARFADFTSKPIADATATTEA   79 (149)
T ss_dssp             ---CCCCEEEEEEESCHHHHHHHHHH-TTCEECGGGCBTT---EEEEEEETTEEEEEEEHHHHGGGCSSCBCCTTTCBSC
T ss_pred             CCCCccEEEEEEEeCCHHHHHHHHHH-hCCCcceeecCCc---eeEEeecCcceEeeeccccccccccccCCCCCCCCee
Confidence            34567899999999999999999998 5555544333221   2223333444444443221   111111122335557


Q ss_pred             EEEEEEC---CHHHHHHHHHhCCCeEEccC---CCccEEEEeCCCCCeEEEEeeC
Q 032856           83 HTCIAIR---DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        83 hi~~~v~---d~~~~~~~l~~~g~~~~~~~---~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      |++|.|+   ++++++++++++|+.+..++   ++++++||+|||||.|||+..+
T Consensus        80 ~~a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~~~~~~f~DPDGn~iEi~~~~  134 (149)
T 4gym_A           80 IVCVSAIDRDDVDRFADTALGAGGTVARDPMDYGFMYGRSFHDLDGHLWEVMWMS  134 (149)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHTTCEECSCCEECSSEEEEEEECTTCCEEEEEEEC
T ss_pred             EEEEEeccHHHHHHHHHHHHhcCceeeccccccCCEEEEEEEcCCCCEEEEEEEC
Confidence            9999997   57788999999999886543   4578999999999999998765

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.88  E-value=3.8e-22  Score=121.35  Aligned_cols=118  Identities=13%  Similarity=0.092  Sum_probs=84.1

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCC--CCCCCCCceEEE
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTC   85 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~hi~   85 (132)
                      |..++.|+.|.|+|++++++||+++|||++.....     ...+++..++..+.|...........  ......+ .|++
T Consensus        22 M~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g-~~l~   95 (148)
T 2r6u_A           22 MTGRIVHFEIPFDDGDRARAFYRDAFGWAIAEIPD-----MDYSMVTTGPVGESGMPDEPGYINGGMMQRGEVTT-PVVT   95 (148)
T ss_dssp             TCCCEEEEEEEESSHHHHHHHHHHHHCCEEEEETT-----TTEEEEECSCBCTTSSBCSSSCBCEEEEESSSSCS-CEEE
T ss_pred             cCCceEEEEEEeCCHHHHHHHHHHccCcEEEECCC-----CCEEEEEeCCcceeecccCCcccccceeecCCCCe-EEEE
Confidence            44789999999999999999999999999876311     13466777665433322211100000  0000133 4999


Q ss_pred             EEECCHHHHHHHHHhCCCeEEccC---C-CccEEEEeCCCCCeEEEEeeC
Q 032856           86 IAIRDVSKLKMILDKAGISYTLSK---S-GRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        86 ~~v~d~~~~~~~l~~~g~~~~~~~---~-~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      |.|+|+++++++|+++|+++..++   . .++.+||+|||||.|||++..
T Consensus        96 f~v~dld~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A           96 VDVESIESALERIESLGGKTVTGRTPVGNMGFAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             EECSCHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHcCCeEecCCeecCCCEEEEEEECCCCCEEEEEecC
Confidence            999999999999999999875432   2 258999999999999999875

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.87  E-value=2.1e-21  Score=114.29  Aligned_cols=106  Identities=16%  Similarity=0.155  Sum_probs=82.7

Q ss_pred             eeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECC
Q 032856           11 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD   90 (132)
Q Consensus        11 ~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d   90 (132)
                      ...++.|.|+|++++++||+++||+++....+      ..+++..++..+++.......        .....|++|.|+|
T Consensus         5 ~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~--------~~~~~~~~~~v~d   70 (122)
T 1qto_A            5 LGAVPVLTAVDVPANVSFWVDTLGFEKDFGDR------DFAGVRRGDIRLHISRTEHQI--------VADNTSAWIEVTD   70 (122)
T ss_dssp             CCCCCEEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCHH--------HHTTCEEEEEESC
T ss_pred             cceeEEEEcCCHHHHHHHHHhccCcEEeeCCC------CEEEEEECCEEEEEEcCCCCC--------CCCceEEEEEECC
Confidence            34589999999999999999999999986521      346677788777776543211        1223699999999


Q ss_pred             HHHHHHHHHhC------CC--eEEccC---CCccEEEEeCCCCCeEEEEee
Q 032856           91 VSKLKMILDKA------GI--SYTLSK---SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        91 ~~~~~~~l~~~------g~--~~~~~~---~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      +++++++++++      |+  ++..++   ..++.++++|||||.|||.+.
T Consensus        71 vd~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           71 PDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHHHHHTTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHHhhccccccCccccccCCCcCCCCCcEEEEECCCCCEEEEecC
Confidence            99999999999      99  765432   223889999999999999985

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.87  E-value=1.5e-20  Score=111.13  Aligned_cols=106  Identities=19%  Similarity=0.246  Sum_probs=83.3

Q ss_pred             eeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECCH
Q 032856           12 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV   91 (132)
Q Consensus        12 ~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~   91 (132)
                      ..++.|.|+|++++++||++ ||+++.....      ..+++..++..+++.......       ...+..|++|.|+|+
T Consensus         4 ~~~~~l~v~D~~~a~~FY~~-LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~-------~~~~~~~~~~~v~dv   69 (126)
T 1ecs_A            4 QATPNLPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGDLMLEFFAHPGLD-------PLASWFSCCLRLDDL   69 (126)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCEEEEECS------SEEEEEETTEEEEEEECTTCC-------GGGCCCEEEEEESCH
T ss_pred             cEEEEEEeCCHHHHHHHHHH-CCCEEEecCC------CEEEEEeCCEEEEEEeCCCCC-------CCCcceEEEEEECCH
Confidence            46899999999999999998 9999986521      346677788778877643311       113467999999999


Q ss_pred             HHHHHHHHhCCCeE-------Ecc----CCCccEEEEeCCCCCeEEEEeeC
Q 032856           92 SKLKMILDKAGISY-------TLS----KSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        92 ~~~~~~l~~~g~~~-------~~~----~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      ++++++|+++|+++       ..+    +.+.+.++++|||||.|||.+..
T Consensus        70 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  120 (126)
T 1ecs_A           70 AEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE  120 (126)
T ss_dssp             HHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECC
T ss_pred             HHHHHHHHHCCCccccccCccccCCcccCcccEEEEEECCCCCEEEEecch
Confidence            99999999999983       322    23568999999999999999864

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.87  E-value=7.9e-21  Score=113.57  Aligned_cols=111  Identities=22%  Similarity=0.274  Sum_probs=82.3

Q ss_pred             eeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECC
Q 032856           11 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD   90 (132)
Q Consensus        11 ~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d   90 (132)
                      .-.+..|.|+|++++++||+++||+++....+      ..+++..++..+++........   .+. ..+..|++|.|+|
T Consensus         7 ~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~l~~~~~~l~l~~~~~~~~---~~~-~~~~~~l~~~v~d   76 (134)
T 3fcd_A            7 HQITPFLHIPDMQEALTLFCDTLGFELKYRHS------NYAYLELSGCGLRLLEEPARKI---IPD-GIARVAICIDVSD   76 (134)
T ss_dssp             CEEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETTEEEEEEECCCC-------------EEEEEECSC
T ss_pred             hcceeEEEECCHHHHHHHHHhccCcEEEEeCC------CeEEEEECCEEEEEEeCCCCCc---CCC-CCceEEEEEEeCC
Confidence            44557899999999999999999999987643      3577888888888877654321   111 1234799999999


Q ss_pred             HHHHHHHHHhCCCe----EE----ccCCCccEEEEeCCCCCeEEEEeeC
Q 032856           91 VSKLKMILDKAGIS----YT----LSKSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        91 ~~~~~~~l~~~g~~----~~----~~~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      +++++++|+++|+.    +.    ..+.+.+.++++|||||.|||.+..
T Consensus        77 v~~~~~~l~~~g~~~g~~i~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  125 (134)
T 3fcd_A           77 IDSLHTKLSPALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNFTAPL  125 (134)
T ss_dssp             HHHHHHHHHHHHTTSCGGGEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             HHHHHHHHHhcCCccCCccccCCcccCCCcEEEEEECCCCCEEEEEEcc
Confidence            99999999976643    22    2345668999999999999999875

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.87  E-value=2.1e-21  Score=112.69  Aligned_cols=106  Identities=16%  Similarity=0.226  Sum_probs=81.6

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCC-eEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   88 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   88 (132)
                      ++++|+.|.|+|++++++||+++||+++.....     ...+++..++ ..+.+.......        ..+..|++|.|
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~-----~~~~~~~~~~~~~l~l~~~~~~~--------~~~~~~~~~~v   68 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG-----NAFAVMRDNDGFILTLMKGKEVQ--------YPKTFHVGFPQ   68 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET-----TTEEEEECTTCCEEEEEECSSCC--------CCTTCCEEEEC
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC-----CcEEEEEcCCCcEEEEEeCCCCC--------CCceeEEEEEc
Confidence            578999999999999999999999999876422     1346666643 456666543211        14578999999


Q ss_pred             ---CCHHHHHHHHHhCCCeEEccC-CCccEEEEeCCCCCeEEEE
Q 032856           89 ---RDVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFT  128 (132)
Q Consensus        89 ---~d~~~~~~~l~~~g~~~~~~~-~~~~~~~~~Dp~G~~iel~  128 (132)
                         +|+++++++|+++|+++..+. .+.+.+|++|||||.|||+
T Consensus        69 ~~~~d~~~~~~~l~~~G~~~~~p~~~~~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           69 ESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCCCEEC-CEEEEEEETTTEEEEEE
T ss_pred             CCHHHHHHHHHHHHHCCCEEecCcCCCcEEEEEECCCCcEEEEe
Confidence               799999999999999865321 1268999999999999986

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.87  E-value=2.1e-21  Score=116.61  Aligned_cols=118  Identities=12%  Similarity=0.137  Sum_probs=82.9

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCceEEEE
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCI   86 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hi~~   86 (132)
                      -....||+|.|+|++++++||+++|||++...... ......+++..++.  .+++.......    ....+.+..|++|
T Consensus         9 ~~~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~----~~~~~~~~~hi~~   83 (139)
T 1twu_A            9 QAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHADYHLEFTQYEGGS----TAPVPHPDSLLVF   83 (139)
T ss_dssp             BCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSSSEEEEEEEETTCC----CCCCCCTTCEEEE
T ss_pred             CcceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCCceEEEEeecCCCC----CCCCCCCccEEEE
Confidence            34567888999999999999999999998764321 12234566666543  45554433221    1122345689999


Q ss_pred             EECCH---HHHHHHHHhCCCeEEc--cC-CCccEEEEeCCCCCeEEEEeeC
Q 032856           87 AIRDV---SKLKMILDKAGISYTL--SK-SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        87 ~v~d~---~~~~~~l~~~g~~~~~--~~-~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      .|+|+   ++++++|+++|+++..  .+ ...+..||+|||||.|||++..
T Consensus        84 ~v~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           84 YVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             ECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESSC
T ss_pred             EeCCcchHHHHHHHHHHcCCcCcCCCCcccCCCCeEEECCCCCEEEEEEcC
Confidence            99999   9999999999999873  22 1112247999999999999753

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.86  E-value=1e-20  Score=128.65  Aligned_cols=122  Identities=16%  Similarity=0.256  Sum_probs=91.0

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCC-CCCceeEEEEeC----CeEEEEEecCCCCCCCCCCCCCCCc
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD-KLPYRGAWLWVG----AEMIHLMELPNPDPLSGRPEHGGRD   81 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~-~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~   81 (132)
                      +++.+++||+|.|+|++++++||+++||+++..+.... .......++...    +..+.++.......  . ....+++
T Consensus         4 ~~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~~--~-~~~~~~~   80 (335)
T 3oaj_A            4 KKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQ--G-VIGDGQV   80 (335)
T ss_dssp             CCCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCCB--C-BCCBSEE
T ss_pred             ccCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCCC--C-CCCCCce
Confidence            56899999999999999999999999999988753221 112222333332    34677776543211  1 1123567


Q ss_pred             eEEEEEEC--CHHHHHHHHHhCCCeEEc-cCCCccEEEEeCCCCCeEEEEeeC
Q 032856           82 RHTCIAIR--DVSKLKMILDKAGISYTL-SKSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        82 ~hi~~~v~--d~~~~~~~l~~~g~~~~~-~~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      .|++|.|+  |+++++++|+++|+++.. ...+.+.+||+|||||.+||++..
T Consensus        81 ~hiaf~V~~~dl~~~~~rL~~~Gv~~~~~~~~g~~~~~f~DPdGn~iEl~~~~  133 (335)
T 3oaj_A           81 GVTSYVVPKGAMAFWEKRLEKFNVPYTKIERFGEQYVEFDDPHGLHLEIVERE  133 (335)
T ss_dssp             EEEEEEECTTCHHHHHHHHHHTTCCCEEEEETTEEEEEEECTTSCEEEEEECS
T ss_pred             EEEEEEecHHHHHHHHHHHHhCcceeeeeccCCcEEEEEECCCCCEEEEEEeC
Confidence            89999999  999999999999998764 335778999999999999999864

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.86  E-value=1.7e-20  Score=122.96  Aligned_cols=110  Identities=18%  Similarity=0.230  Sum_probs=87.2

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEE
Q 032856            6 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC   85 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~   85 (132)
                      ...+++++||.|.|+|++++++||+++|||++....+      ..+++..++..+.+......         ..+..|++
T Consensus        21 ~~~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~------~~~~L~~g~~~l~l~~~~~~---------~~~~~hia   85 (252)
T 3pkv_A           21 QGHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGVSQIQFRAAADG---------TKPFYHIA   85 (252)
T ss_dssp             ----CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS------SEEEEEETTEEEEEEECCTT---------CCCCCEEE
T ss_pred             cCcCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC------CEEEEEeCCEEEEEEECCCC---------CCCeeEEE
Confidence            3567899999999999999999999999999887643      34678888877777654321         13478999


Q ss_pred             EEEC--CHHHHHHHHHhCCCeEEc---------cCCCccEEEEeCCCCCeEEEEeeC
Q 032856           86 IAIR--DVSKLKMILDKAGISYTL---------SKSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        86 ~~v~--d~~~~~~~l~~~g~~~~~---------~~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      |.|+  ++++++++|+++ +++..         .+.+.+.+||+|||||.+||++.+
T Consensus        86 f~V~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~  141 (252)
T 3pkv_A           86 INIAANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQ  141 (252)
T ss_dssp             EEECTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEES
T ss_pred             EEecHHHHHHHHHHHHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeC
Confidence            9996  799999999999 98754         134689999999999999999864

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.85  E-value=2.2e-20  Score=127.04  Aligned_cols=116  Identities=16%  Similarity=0.161  Sum_probs=87.0

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCceEE
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHT   84 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~hi   84 (132)
                      ..+.+++||+|.|+|++++.+||+++|||+...+..      ..+.+..++  ..+++.......  .. ....+++.|+
T Consensus       149 ~~i~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~------~~~~~~~g~~~~~l~l~~~~~~~--~~-~~g~g~~~Hi  219 (335)
T 3oaj_A          149 VAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG------DFVRYRSAGDIGNVIDLKLTPIG--RG-QMGAGTVHHI  219 (335)
T ss_dssp             TSCCEEEEEEEECSSHHHHHHHHHHTSCCEEEEEET------TEEEEECSSSSSCEEEEESSCCC--BC-BCSBTEEEEE
T ss_pred             hhhccccceEEEECCHHHHHHHHHHHhCCEEeeccC------CEEEEEeCCCCcEEEEEeCCCCC--cC-CCCCcceEEE
Confidence            468999999999999999999999999999987532      123344443  356666533221  11 1223568899


Q ss_pred             EEEECC---HHHHHHHHHhCCCeEEc--cCCCccEEEEeCCCCCeEEEEeeC
Q 032856           85 CIAIRD---VSKLKMILDKAGISYTL--SKSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        85 ~~~v~d---~~~~~~~l~~~g~~~~~--~~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      ||.|+|   ++++.++|+++|+++..  .+...+++||+||+||.|||.+..
T Consensus       220 Af~v~d~~~l~~~~~~L~~~G~~~~~~~~r~~~~siYfrDP~G~~iEl~td~  271 (335)
T 3oaj_A          220 AWRANDDEDQLDWQRYIASHGYGVTPVRDRNYFNAIYFREHGEILFEIATDP  271 (335)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCCCCCEECSSSEEEEEECTTSCEEEEEESC
T ss_pred             EEEcCCHHHHHHHHHHHHHCCCCccccccCCcEEEEEEECCCCcEEEEEeCC
Confidence            999998   66689999999998653  234578999999999999999863

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.84  E-value=8.3e-21  Score=114.12  Aligned_cols=117  Identities=19%  Similarity=0.137  Sum_probs=80.0

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEE----ecCCCCCCCCCCCCCCCce
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLM----ELPNPDPLSGRPEHGGRDR   82 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~   82 (132)
                      ..+++++|+.|.|+|++++++||+++||+++....+      ..+.+. .+..++..    ....+...........+..
T Consensus         4 ~~~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (141)
T 2qnt_A            4 FQGMRFVNPIPFVRDINRSKSFYRDRLGLKILEDFG------SFVLFE-TGFAIHEGRSLEETIWRTSSDAQEAYGRRNM   76 (141)
T ss_dssp             CCSCCCCCCCCEESCHHHHHHHHHHTTCCCEEEECS------SEEEET-TSCEEEEHHHHHHHHHSCCC--CCCSCCSSC
T ss_pred             ccccccceEEEEECCHHHHHHHHHHhcCCEEEEEcC------CcEEEe-ccceeccCchhhhhccccCCccccccCCCce
Confidence            346789999999999999999999999999876432      122232 23233210    0000000001112234678


Q ss_pred             EEEEEECCHHHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEeeC
Q 032856           83 HTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        83 hi~~~v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      |++|.|+|+++++++|++ |+++..+    +.+.+.++++|||||.|||.+..
T Consensus        77 ~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  128 (141)
T 2qnt_A           77 LLYFEHADVDAAFQDIAP-HVELIHPLERQAWGQRVFRFYDPDGHAIEVGESL  128 (141)
T ss_dssp             EEEEEESCHHHHHC-CGG-GSCEEEEEEECTTSCEEEEEECTTCCEEEEEECC
T ss_pred             EEEEEeCcHHHHHHHHHc-CCccccCCccCCCCCEEEEEECCCCCEEEEEecc
Confidence            999999999999999999 9986532    24568999999999999999863

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.84  E-value=7.6e-20  Score=110.56  Aligned_cols=114  Identities=18%  Similarity=0.238  Sum_probs=81.2

Q ss_pred             eeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCC-C---CCCCCCCCCceEEEEEE
Q 032856           13 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP-L---SGRPEHGGRDRHTCIAI   88 (132)
Q Consensus        13 ~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~---~~~~~~~~~~~hi~~~v   88 (132)
                      ..+.|.|+|++++++||+++|||++.......    ..+++..++..+.|........ .   ......+.+. +++|.|
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~----~~~~l~~g~~~l~l~~~~~~~~~~~~~~~~~~~~~g~-~~~~~v   81 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERPDE----EFVYLTLDGVDVMLEGIAGKSRKWLSGDLEFPLGSGV-NFQWDV   81 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEGGG----TEEEEEETTEEEEEEEC-----------CCSSTTTTE-EEEEEC
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecCCC----CEEEEEcCCeEEEEEeccCCCcccccCccccCCCCce-EEEEEE
Confidence            45889999999999999999999987532211    3466777887787776522111 0   0011122343 499999


Q ss_pred             CCHHHHHHHHHh-CCCeEEcc-----------CCCccEEEEeCCCCCeEEEEeeC
Q 032856           89 RDVSKLKMILDK-AGISYTLS-----------KSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        89 ~d~~~~~~~l~~-~g~~~~~~-----------~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      +|+++++++|++ +|+++...           ..+.+.++|+|||||.|||.+..
T Consensus        82 ~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~  136 (145)
T 2rk9_A           82 IDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDI  136 (145)
T ss_dssp             SCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC-
T ss_pred             CCHHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcC
Confidence            999999999999 99987532           23458899999999999999864

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.84  E-value=2.6e-20  Score=126.86  Aligned_cols=115  Identities=14%  Similarity=0.187  Sum_probs=87.0

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCceEE
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHT   84 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hi   84 (132)
                      +.+.+++||+|.|+|++++.+||+++|||++..... +......+|+..++.  .+.+.....        ...+++.|+
T Consensus       149 ~~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~~~~l~~~~~~~--------~~~~~~~Hi  219 (339)
T 3lm4_A          149 IPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLLGHEVACMRDMT--------GGHGKLHHL  219 (339)
T ss_dssp             SCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSSSCSEEEEECTT--------SCCSEEEEE
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCCceEEEEeccCC--------CCCCceeEE
Confidence            478999999999999999999999999999887543 222234566776553  344443211        112568999


Q ss_pred             EEEECC---HHHHHHHHHhCCCeEEccC-----CCccEEEEeCCCCCeEEEEee
Q 032856           85 CIAIRD---VSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        85 ~~~v~d---~~~~~~~l~~~g~~~~~~~-----~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      +|.|+|   +++++++|+++|+++..++     ...+.+||+||+||.|||++.
T Consensus       220 af~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  273 (339)
T 3lm4_A          220 AFFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGE  273 (339)
T ss_dssp             EEECCCHHHHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECC
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEc
Confidence            999999   7788999999999986433     234679999999999999854

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.84  E-value=5e-20  Score=123.83  Aligned_cols=114  Identities=17%  Similarity=0.293  Sum_probs=85.0

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCC-CCceeEEEEeCCeE--EEEEecCCCCCCCCCCCCCCCceE
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-LPYRGAWLWVGAEM--IHLMELPNPDPLSGRPEHGGRDRH   83 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~h   83 (132)
                      +.+.+++||+|.|+|++++++||+++|||++........ .....+|+..++..  +.+...  +        ..++..|
T Consensus       147 ~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~~~H  216 (309)
T 3hpy_A          147 IAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHDIAFVEY--P--------EKGKLHH  216 (309)
T ss_dssp             SCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSSSCSEEEEEC--S--------STTEEEE
T ss_pred             cccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCCceeEEEecC--C--------CCCceeE
Confidence            568899999999999999999999999999876543222 22356677775542  223221  1        1245899


Q ss_pred             EEEEECCHHH---HHHHHHhCCCeEEccC-----CCccEEEEeCCCCCeEEEEee
Q 032856           84 TCIAIRDVSK---LKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        84 i~~~v~d~~~---~~~~l~~~g~~~~~~~-----~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      ++|.|+|+++   ++++|+++|+++...+     .+.+++||+||+||.|||...
T Consensus       217 iaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  271 (309)
T 3hpy_A          217 CSFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMG  271 (309)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEE
T ss_pred             EEEECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeC
Confidence            9999998775   5789999999876432     346789999999999999865

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.84  E-value=8.8e-20  Score=122.63  Aligned_cols=110  Identities=19%  Similarity=0.209  Sum_probs=84.9

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CC---eEEEEEecCCCCCCCCCCCCCCCc
Q 032856            6 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA---EMIHLMELPNPDPLSGRPEHGGRD   81 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~---~~~~l~~~~~~~~~~~~~~~~~~~   81 (132)
                      ++.+++++||.|.|+|++++++||+++|||++......     ..+++.. ++   ..+.+...  .         ..+.
T Consensus         3 m~~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~l~~~~~~~~~~l~l~~~--~---------~~~~   66 (309)
T 3hpy_A            3 MTGVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDDQ-----GRVYFKCWDERDHSCYIIREA--D---------TAGI   66 (309)
T ss_dssp             BCSEEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECTT-----SCEEEECTTCCBSCSEEEEEC--S---------SCEE
T ss_pred             ccccceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcCC-----CeEEEEeccCCCceEEEEEeC--C---------CCce
Confidence            35689999999999999999999999999998875321     2355654 43   23333321  1         1457


Q ss_pred             eEEEEEECC---HHHHHHHHHhCCCeEEcc-----CCCccEEEEeCCCCCeEEEEeeC
Q 032856           82 RHTCIAIRD---VSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        82 ~hi~~~v~d---~~~~~~~l~~~g~~~~~~-----~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      .|++|.|+|   +++++++|+++|+++...     +.+.+.+||+|||||.|||++..
T Consensus        67 ~h~a~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~  124 (309)
T 3hpy_A           67 DFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEK  124 (309)
T ss_dssp             EEEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCB
T ss_pred             eEEEEEECCHHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEcc
Confidence            899999986   899999999999987643     34578999999999999998753

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.84  E-value=7.4e-20  Score=122.29  Aligned_cols=108  Identities=16%  Similarity=0.139  Sum_probs=84.8

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   88 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   88 (132)
                      +++++||.|.|+|++++++||+++|||++....+      ..+++..++..+.+......         ..+..|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~---------~~~~~~~~f~v   66 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSRAWRIAVQQGE---------VDDLAFAGYEV   66 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEECT---------TCEEEEEEEEE
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC------CeEEEEeCCCcEEEEEecCC---------CCCccEEEEEe
Confidence            6899999999999999999999999999887532      23566666543333222211         14578999999


Q ss_pred             C---CHHHHHHHHHhCCCeEEccC-------CCccEEEEeCCCCCeEEEEeeC
Q 032856           89 R---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        89 ~---d~~~~~~~l~~~g~~~~~~~-------~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      +   |+++++++|+++|+++...+       .+.+.+||.||+||.|||++..
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  119 (297)
T 1lgt_A           67 ADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGA  119 (297)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEECc
Confidence            9   99999999999999876432       4678999999999999999864

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.83  E-value=9.5e-20  Score=124.06  Aligned_cols=113  Identities=14%  Similarity=0.282  Sum_probs=85.9

Q ss_pred             CCCCCCceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CC---eEEEEEecCCCCCCCCCCC
Q 032856            1 MSVEGDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA---EMIHLMELPNPDPLSGRPE   76 (132)
Q Consensus         1 m~~~~~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~---~~~~l~~~~~~~~~~~~~~   76 (132)
                      |+....+.+++++||.|.|+|++++++||+++|||++.....      ..+++.. ++   ..+.+...  +        
T Consensus         1 M~~~~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~--~--------   64 (339)
T 3lm4_A            1 MSLDARFDIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG------QSVYLRGYEDPYPWSLKITEA--P--------   64 (339)
T ss_dssp             ---CGGGSEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET------TEEEEECTTCSSSCSEEEEEC--S--------
T ss_pred             CCCCCCCCCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC------CEEEEEecCCCCceEEEEeeC--C--------
Confidence            666667889999999999999999999999999999987532      2355555 22   12233221  1        


Q ss_pred             CCCCceEEEEEECC---HHHHHHHHHhCCCeEEccC---CCccEEEEeCCCCCeEEEEee
Q 032856           77 HGGRDRHTCIAIRD---VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        77 ~~~~~~hi~~~v~d---~~~~~~~l~~~g~~~~~~~---~~~~~~~~~Dp~G~~iel~~~  130 (132)
                       ..++.|++|.|+|   +++++++|+++|+++...+   .+++.++|+||+||.|||+..
T Consensus        65 -~~g~~~~af~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~  123 (339)
T 3lm4_A           65 -EAGMGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTFEYQSPDGHNLQLLWE  123 (339)
T ss_dssp             -SCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEECCSTTBCCEEEEECTTCCEEEEECC
T ss_pred             -CCCcceEEEEeCCHHHHHHHHHHHHHCCCceeeccCCCCceEEEEEECCCCCEEEEEEe
Confidence             1457899999997   8889999999999886533   457899999999999999864

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.83  E-value=6.4e-20  Score=122.35  Aligned_cols=108  Identities=13%  Similarity=0.135  Sum_probs=83.7

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   88 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   88 (132)
                      +++++||.|.|+|++++++||+++|||++.....      ..+++..++..+.+......         ..+..|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~l~~~~~~---------~~~~~~~~f~v   66 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQRAWRIAVQPGE---------LDDLAYAGLEV   66 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEECT---------TCEEEEEEEEC
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC------CeEEEEcCCceEEEEEccCC---------CCCccEEEEEE
Confidence            6899999999999999999999999999876532      23566665543223222111         14568999999


Q ss_pred             C---CHHHHHHHHHhCCCeEEccC-------CCccEEEEeCCCCCeEEEEeeC
Q 032856           89 R---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        89 ~---d~~~~~~~l~~~g~~~~~~~-------~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      +   |+++++++|+++|+++...+       .+.+.++|+|||||.|||++..
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  119 (292)
T 1kw3_B           67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGP  119 (292)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHcCCeEeecCcccccccCceEEEEEECCCCCEEEEEECc
Confidence            8   89999999999999876533       4578899999999999999754

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.83  E-value=1.4e-19  Score=122.44  Aligned_cols=110  Identities=19%  Similarity=0.223  Sum_probs=86.1

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CC---eEEEEEecCCCCCCCCCCCCCCC
Q 032856            5 GDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA---EMIHLMELPNPDPLSGRPEHGGR   80 (132)
Q Consensus         5 ~~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~---~~~~l~~~~~~~~~~~~~~~~~~   80 (132)
                      ..+++++++|+.|.|+|++++++||+++|||+......      ..+++.. ++   ..+.+...  .         ..+
T Consensus        11 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~--~---------~~~   73 (323)
T 1f1u_A           11 PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLRQG--P---------IAA   73 (323)
T ss_dssp             CCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEEC--S---------SCE
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeecC------CEEEEEecCCCCcEEEEEEEC--C---------CCC
Confidence            45789999999999999999999999999999877532      3456664 32   23444322  1         135


Q ss_pred             ceEEEEEE---CCHHHHHHHHHhCCCeEEccC-----CCccEEEEeCCCCCeEEEEeeC
Q 032856           81 DRHTCIAI---RDVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        81 ~~hi~~~v---~d~~~~~~~l~~~g~~~~~~~-----~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      ..|++|.|   +|+++++++|+++|+++...+     .+++.++|.||+||.|||++..
T Consensus        74 ~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DP~G~~iel~~~~  132 (323)
T 1f1u_A           74 VAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYET  132 (323)
T ss_dssp             EEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCB
T ss_pred             eeEEEEEeCCHHHHHHHHHHHHhCCCcEEeccccccCCcceEEEEECCCCCEEEEEEec
Confidence            78999999   689999999999999876533     3578999999999999998753

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.83  E-value=2.9e-19  Score=108.39  Aligned_cols=113  Identities=13%  Similarity=0.091  Sum_probs=76.2

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeecc-CCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEE-
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEA-RPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT-   84 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi-   84 (132)
                      ..++++.|+.|.|+|++++++||+++|||++... ...+    ...++   +..+++ ........   .. .....|+ 
T Consensus        17 ~~~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~----~~~~~---g~~l~l-~~~~~~~~---~~-~~~~~~~~   84 (148)
T 3bt3_A           17 GYVVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDE----GFGDY---GCVFDY-PSEVAVAH---LT-PFRGFHLF   84 (148)
T ss_dssp             SCEEEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTT----SCEEE---EEEESS-CTTTTSCC------CCCSEEEE
T ss_pred             CceEEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCC----CccEE---ccEEEE-eccCCCcc---cc-ccccccee
Confidence            4578999999999999999999999999998531 1111    12333   222222 01111111   00 0011222 


Q ss_pred             ---------EE-EECCHHHHHHHHHhCCCeEEccC----CCccEEEEeCCCCCeEEEEeeC
Q 032856           85 ---------CI-AIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        85 ---------~~-~v~d~~~~~~~l~~~g~~~~~~~----~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                               +| .|+|+++++++|+++|+++..++    .+.+.+|++|||||.|||.+..
T Consensus        85 ~g~~~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           85 KGEPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             ESCCCSSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEETTTEEEEEEECTTSCEEEEEEEC
T ss_pred             eccCCCccEEEEEcCCHHHHHHHHHHcCCccccCcccCCCccEEEEEECCCCCEEEEeeec
Confidence                     55 99999999999999999875432    4568899999999999999864

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.83  E-value=1.1e-19  Score=121.54  Aligned_cols=107  Identities=17%  Similarity=0.182  Sum_probs=82.6

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeec-cCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCceE
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINE-ARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH   83 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~h   83 (132)
                      |++++++|+.|.|+|++++++||+++|||++.. ...      ..+++..++.  .+.+..  ..         ..+..|
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~------~~~~~~~~~~~~~l~l~~--~~---------~~~~~~   63 (300)
T 2zyq_A            1 MSIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAPE------GALYLRMDDFPARLVVVP--GE---------HDRLLE   63 (300)
T ss_dssp             -CCCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCCS------SCEEEESSSSSCSEEEEE--CS---------SCEEEE
T ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHccCCEEeccCCC------CeEEEEeCCCcEEEEEec--CC---------CCCcce
Confidence            357899999999999999999999999999876 322      2356666543  233332  11         145789


Q ss_pred             EEEEECC---HHHHHHHHHhCCCeEEccC-------CCccEEEEeCCCCCeEEEEee
Q 032856           84 TCIAIRD---VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        84 i~~~v~d---~~~~~~~l~~~g~~~~~~~-------~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      ++|.|++   +++++++|+++|+++...+       .+.+.+||+|||||.|||++.
T Consensus        64 ~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  120 (300)
T 2zyq_A           64 AGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHG  120 (300)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEEC
T ss_pred             EEEEeCCHHHHHHHHHHHHHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEc
Confidence            9999975   8889999999999876432       457899999999999999986

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.83  E-value=1.8e-19  Score=120.79  Aligned_cols=109  Identities=17%  Similarity=0.146  Sum_probs=84.1

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCceE
Q 032856            6 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH   83 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~h   83 (132)
                      .|++++++||.|.|+|++++++||+++|||++.....     ....|+..+..  .+.+..  ..         ..+..|
T Consensus         4 ~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~-----~~~~~~~~~~~~~~l~l~~--~~---------~~~~~~   67 (302)
T 2ehz_A            4 QAAVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE-----KDRFYLRMDYWHHRIVVHH--NG---------QDDLEY   67 (302)
T ss_dssp             CCCEEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSC-----SSEEEEESSSBSCSEEEES--SC---------CSEEEE
T ss_pred             cccccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccC-----CcceEEEeCCCceEEEEec--CC---------CCCeeE
Confidence            4678999999999999999999999999999886432     12356666432  333321  11         135689


Q ss_pred             EEEEEC---CHHHHHHHHHhCCCeEEccC-------CCccEEEEeCCCCCeEEEEee
Q 032856           84 TCIAIR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        84 i~~~v~---d~~~~~~~l~~~g~~~~~~~-------~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      ++|.|+   |+++++++|+++|+++...+       .+.+.+||+||+||.|||++.
T Consensus        68 ~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  124 (302)
T 2ehz_A           68 LGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWG  124 (302)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEE
T ss_pred             EEEEECCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEEC
Confidence            999995   78999999999999876543       346889999999999999975

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.82  E-value=2.7e-19  Score=122.87  Aligned_cols=109  Identities=20%  Similarity=0.246  Sum_probs=84.2

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCceEE
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHT   84 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hi   84 (132)
                      +.|++++||.|.|+|++++++||+++|||++..+.+      ..++++.++.  .+.+.....+         ..++.|+
T Consensus        13 p~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~------~~~~lr~~~~~~~~~l~l~~~~---------~~gl~~~   77 (365)
T 4ghg_A           13 PDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLTKGP---------VAALKAM   77 (365)
T ss_dssp             CCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEECS---------SCEEEEE
T ss_pred             CCCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC------CEEEEEeCCCCcceEEEeccCC---------CCCcceE
Confidence            568999999999999999999999999999987643      4466776432  2222222221         1468899


Q ss_pred             EEEEC---CHHHHHHHHHhCCCeEEcc-----CCCccEEEEeCCCCCeEEEEee
Q 032856           85 CIAIR---DVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        85 ~~~v~---d~~~~~~~l~~~g~~~~~~-----~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      +|.|.   +++++.++|+++|+++...     +.+++.++|.|||||.+||+..
T Consensus        78 a~~v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~  131 (365)
T 4ghg_A           78 AFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFE  131 (365)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             EEEeCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEE
Confidence            99997   5788899999999988643     2356899999999999999854

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.82  E-value=2.3e-19  Score=121.40  Aligned_cols=112  Identities=17%  Similarity=0.212  Sum_probs=84.4

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCceEE
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHT   84 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hi   84 (132)
                      +.+.+++|++|.|+|++++.+|| ++|||++.............+|+..++.  .+.+...  +         +.++.|+
T Consensus       148 ~~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~~~~~~~~~~--~---------~~~~~Hi  215 (323)
T 1f1u_A          148 GELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGG--N---------GPRMHHV  215 (323)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEES--S---------BSEEEEE
T ss_pred             CCCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCCcccEEEeCC--C---------CCCceEE
Confidence            56889999999999999999999 9999998765433222234566666432  2333321  0         1367899


Q ss_pred             EEEECCHHH---HHHHHHhCCC--eEEcc-----CCCccEEEEeCCCCCeEEEEee
Q 032856           85 CIAIRDVSK---LKMILDKAGI--SYTLS-----KSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        85 ~~~v~d~~~---~~~~l~~~g~--~~~~~-----~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      +|.|+|+++   ++++|+++|+  ++..+     ..+...+|++||+||.||+++.
T Consensus       216 af~v~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  271 (323)
T 1f1u_A          216 AFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQ  271 (323)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             EEECCCHHHHHHHHHHHHHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeC
Confidence            999999999   8999999999  87642     2345779999999999999853

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.82  E-value=2.6e-19  Score=120.14  Aligned_cols=108  Identities=17%  Similarity=0.214  Sum_probs=85.0

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCceEE
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHT   84 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~hi   84 (132)
                      |.+++++||.|.|+|++++++||+++|||+......  .   ..+++..++  ..+.+....           ..+..|+
T Consensus         2 m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~---~~~~~~~~~~~~~l~l~~~~-----------~~~~~~~   65 (305)
T 2wl9_A            2 AKVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGE--D---DRIYLRMDRWHHRIVLHADG-----------SDDLAYI   65 (305)
T ss_dssp             CCCCEEEEEEEECSCHHHHHHHHTTTTCCEEECCSC--T---TEEEEECSSBSCSEEEECSS-----------CCEEEEE
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHhccCCEEeeccC--C---CeEEEEeCCCeEEEEEEECC-----------CCCeEEE
Confidence            568899999999999999999999999999876221  1   245677765  345554221           1457899


Q ss_pred             EEEEC---CHHHHHHHHHhCCCeEEccC-------CCccEEEEeCCCCCeEEEEee
Q 032856           85 CIAIR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        85 ~~~v~---d~~~~~~~l~~~g~~~~~~~-------~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      +|.|+   |+++++++|+++|+++...+       .+.+.+||+||+||.|||++.
T Consensus        66 ~f~v~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~  121 (305)
T 2wl9_A           66 GWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYG  121 (305)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEE
T ss_pred             EEEECCHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEEC
Confidence            99997   69999999999999876432       346889999999999999876

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.82  E-value=4.6e-19  Score=120.54  Aligned_cols=122  Identities=16%  Similarity=0.227  Sum_probs=86.0

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCC-CCceeEEEEeC----CeEEEEEecCCCCCCCCCCCCCCCc
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-LPYRGAWLWVG----AEMIHLMELPNPDPLSGRPEHGGRD   81 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~-~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~   81 (132)
                      +++++++||.|.|+|++++++||+++|||++........ ......++..+    +..+.+........   ......+.
T Consensus        26 ~~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~---~~~~~~~~  102 (338)
T 1zsw_A           26 YEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGR---TYRGTNAI  102 (338)
T ss_dssp             SCCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCB---CBCCBSEE
T ss_pred             CcCccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCcc---CcCCCCCe
Confidence            358899999999999999999999999999876431110 01111222222    23555555432211   11122457


Q ss_pred             eEEEEEEC---CHHHHHHHHHhCCCeEEccC--CCccEEEEeCCCCCeEEEEeeC
Q 032856           82 RHTCIAIR---DVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        82 ~hi~~~v~---d~~~~~~~l~~~g~~~~~~~--~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      .|++|.|+   |+++++++|+++|+++...+  .|.+.+||.|||||.|||++..
T Consensus       103 ~hiaf~v~~~~dld~~~~~l~~~G~~~~~~~~~~G~~~~~f~DPdG~~iel~~~~  157 (338)
T 1zsw_A          103 TRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEGLRLVLLVSN  157 (338)
T ss_dssp             EEEEEEESCHHHHHHHHHHHHHTTCEECCSEEETTEEEEEEECTTCCEEEEEECT
T ss_pred             eeEEEEcCCHHHHHHHHHHHHHCCCccccccccCCcEEEEEECCCCCEEEEEEcC
Confidence            89999998   78999999999999876542  4568999999999999999864

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.82  E-value=6.3e-19  Score=119.89  Aligned_cols=116  Identities=11%  Similarity=0.122  Sum_probs=84.5

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeC--Ce--EEEEEecCCCCCCCCCCCCCCCc
Q 032856            6 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AE--MIHLMELPNPDPLSGRPEHGGRD   81 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~--~~--~~~l~~~~~~~~~~~~~~~~~~~   81 (132)
                      .+.+++++||+|.|+|++++++||+++|||++.....      ..+++..+  +.  .+..+.. ....   .....+++
T Consensus       175 ~~~~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~-~~~~---~~~~~~~~  244 (338)
T 1zsw_A          175 KHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND------QEAIFQSIKGEAFGEIVVKYL-DGPT---EKPGRGSI  244 (338)
T ss_dssp             GGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS------SEEEEESSTTCSTTCEEEEEC-CSSB---CBCCBTCE
T ss_pred             cccCceEEEEEEEECCHHHHHHHHHHhcCCEEEeecC------CeEEEEecCCCCceEEEEecc-CCCC---CCCCCCce
Confidence            3568899999999999999999999999999987543      12344552  22  3333332 1110   11112457


Q ss_pred             eEEEEEEC---CHHHHHHHHHhCCCeEEcc--CCCccEEEEeCCCCCeEEEEeeC
Q 032856           82 RHTCIAIR---DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        82 ~hi~~~v~---d~~~~~~~l~~~g~~~~~~--~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      .|++|.|+   |+++++++|+++|+++...  ..+.+.+||+|||||.|||++..
T Consensus       245 ~hiaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          245 HHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTTCCCCCCEECSSEEEEEEECTTCCEEEEEEEE
T ss_pred             EEEEEEeCCHHHHHHHHHHHHHCCCceeeeeecCceEEEEEECCCCCEEEEEEcC
Confidence            89999999   7899999999999987521  24568899999999999999753

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.82  E-value=3.2e-20  Score=126.03  Aligned_cols=116  Identities=12%  Similarity=0.068  Sum_probs=85.3

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCC-----------CCCceeEEEEeCC----eEEEEEecCCCCCC
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD-----------KLPYRGAWLWVGA----EMIHLMELPNPDPL   71 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~-----------~~~~~~~~~~~~~----~~~~l~~~~~~~~~   71 (132)
                      |++++++|++|.|+|++++++||+++|||++..+....           ...+..+++..+.    ..+++.......  
T Consensus        23 M~~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~--  100 (330)
T 3zi1_A           23 MAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVG--  100 (330)
T ss_dssp             CSCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCC--
T ss_pred             cccceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCC--
Confidence            55689999999999999999999999999987654322           2233455665542    345665432221  


Q ss_pred             CCCCCCCCCceEEEEEECCHHHHHHHHHhCCCeEEccCCCccEEEEeCCCCCeEEEEeeC
Q 032856           72 SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        72 ~~~~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                        ....+.++.|++|.|+|+   .++++++|+++...+.  ..+|++|||||.|||++..
T Consensus       101 --~~~~~~g~~hiaf~V~d~---~~~l~~~G~~~~~~~~--~~~~~~DPdG~~iel~~~~  153 (330)
T 3zi1_A          101 --DYKLGNDFMGITLASSQA---VSNARKLEWPLTEVAE--GVFETEAPGGYKFYLQNRS  153 (330)
T ss_dssp             --CCCBCSSEEEEEEECHHH---HHHHHHHTCCCEEEET--TEEEEECTTSCEEEEESSC
T ss_pred             --ccccCCCeeEEEEECchH---HHHHHHcCCceeccCC--ceEEEECCCCCEEEEEecC
Confidence              222345789999999987   6788899998876553  4899999999999999864

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.81  E-value=2.3e-19  Score=120.39  Aligned_cols=114  Identities=16%  Similarity=0.276  Sum_probs=81.7

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCceEE
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHT   84 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hi   84 (132)
                      +.+.+++||.|.|+|++++++||+++|||++..............|+..+..  .+.+....          ..+...|+
T Consensus       146 ~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----------~~g~~~hi  215 (307)
T 1mpy_A          146 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHP----------EKGRLHHV  215 (307)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEECS----------SSSEEEEE
T ss_pred             CCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCCceeEEEecCC----------CCCcceEE
Confidence            5788999999999999999999999999998764321111112245555432  34433211          11337899


Q ss_pred             EEEEC---CHHHHHHHHHhCCCeEEccC-----CCccEEEEeCCCCCeEEEEee
Q 032856           85 CIAIR---DVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        85 ~~~v~---d~~~~~~~l~~~g~~~~~~~-----~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      +|.|+   ++++++++|+++|+++..++     ..++.+||+|||||.|||.+.
T Consensus       216 ~f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  269 (307)
T 1mpy_A          216 SFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCG  269 (307)
T ss_dssp             EEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEEC
T ss_pred             EEEcCCHHHHHHHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEec
Confidence            99999   56667899999999875322     235789999999999999985

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.81  E-value=7.9e-19  Score=118.20  Aligned_cols=109  Identities=20%  Similarity=0.275  Sum_probs=86.9

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCC----eEEEEEecCCCCCCCCCCCCCCCc
Q 032856            6 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRD   81 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~   81 (132)
                      .+++++++|+.|.|+|++++++||+++|||++.....      ..+++..++    ..+.+....           ..+.
T Consensus         3 ~~~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~~-----------~~~~   65 (310)
T 3b59_A            3 LSRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA------NNAWFKAQGADEHHVVQLRRAD-----------ENRI   65 (310)
T ss_dssp             CCCEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEECTTSCCSCSEEEEECS-----------SCEE
T ss_pred             ceecceeeEEEEecCCHHHHHHHHHhCcCCEEeeecC------CeEEEEECCCCCCEEEEEEECC-----------CCCe
Confidence            4678999999999999999999999999999877532      346677755    445554321           1457


Q ss_pred             eEEEEEE---CCHHHHHHHHHhCCCeEEcc------CCCccEEEEeCCCCCeEEEEeeC
Q 032856           82 RHTCIAI---RDVSKLKMILDKAGISYTLS------KSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        82 ~hi~~~v---~d~~~~~~~l~~~g~~~~~~------~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      .|++|.|   +|+++++++|+++|+++...      +.+.+.++|.||+||.|||++..
T Consensus        66 ~~~~~~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  124 (310)
T 3b59_A           66 DVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSDV  124 (310)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHHTCCBCCCSEECCSTTCCEEEEEECTTSCEEEEEECC
T ss_pred             eEEEEEeCCHHHHHHHHHHHHhCCCeEeecCccccccCCceEEEEECCCCCEEEEEEcc
Confidence            8999999   68999999999999987543      24678999999999999998754

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.81  E-value=1.7e-18  Score=115.27  Aligned_cols=118  Identities=16%  Similarity=0.172  Sum_probs=83.2

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEE-EEEecCCCCCCCCCCCCCCCceEEEE
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMI-HLMELPNPDPLSGRPEHGGRDRHTCI   86 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~hi~~   86 (132)
                      ....++|+.|.|+|++++++||+++|||+.......... ...+++..++... .+.......     +.......+++|
T Consensus        29 ~~g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~-~~~~~~~~~g~~~~~l~~~~~~~-----~~~~~~~~~~~~  102 (282)
T 3oxh_A           29 RQGTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGG-GVYSMATLNGEAVAAIAPMPPGA-----PEGMPPIWNTYI  102 (282)
T ss_dssp             CTTSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC------CCEEEEEETTEEEEEEEECCSCC--------CCCEEEEEE
T ss_pred             CCCCcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCc-cCEEEEEeCCeeeEeeccCCCCC-----CCCCCCcEEEEE
Confidence            345799999999999999999999999998765431110 0234455555433 333322211     111233468999


Q ss_pred             EECCHHHHHHHHHhCCCeEEccC----CCccEEEEeCCCCCeEEEEeeC
Q 032856           87 AIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        87 ~v~d~~~~~~~l~~~g~~~~~~~----~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      .|+|+++++++++++|+++..++    ..++.++|+||+||.|||++..
T Consensus       103 ~v~d~d~~~~~l~~~G~~~~~~p~~~~~~g~~~~~~DP~G~~i~l~~~~  151 (282)
T 3oxh_A          103 AVDDVDAVVDKVVPGGGQVMMPAFDIGDAGRMSFITDPTGAAVGLWQAN  151 (282)
T ss_dssp             ECSCHHHHHTTTTTTTCEEEEEEEEETTTEEEEEEECTTCCEEEEEEES
T ss_pred             EeCCHHHHHHHHHHCCCEEEECCEecCCCeEEEEEECCCCCEEEEEEcc
Confidence            99999999999999999886432    3568999999999999999864

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.81  E-value=4.7e-19  Score=118.54  Aligned_cols=114  Identities=12%  Similarity=0.212  Sum_probs=82.6

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCC--------CC-CceeEEEEeCCe--EEEEEecCCCCCCCCCC
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--------KL-PYRGAWLWVGAE--MIHLMELPNPDPLSGRP   75 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~--------~~-~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~   75 (132)
                      ..+.+++|+.|.|+|++++++||+++|||++.......        .. ....+|+..++.  .+.+...  +       
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~--~-------  208 (300)
T 2zyq_A          138 TGEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHSLAFLPM--P-------  208 (300)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSBSCSEEEESS--C-------
T ss_pred             cCCCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCCccEEEEecC--C-------
Confidence            34678999999999999999999999999986432111        01 124456666542  3444321  1       


Q ss_pred             CCCCCceEEEEEECCHHH---HHHHHHhCCCeEEccC-----CCccEEEEeCCCCCeEEEEee
Q 032856           76 EHGGRDRHTCIAIRDVSK---LKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        76 ~~~~~~~hi~~~v~d~~~---~~~~l~~~g~~~~~~~-----~~~~~~~~~Dp~G~~iel~~~  130 (132)
                       ...+..|++|.|+|+++   ++++|+++|+++...+     ...+.+||+||+||.|||.+.
T Consensus       209 -~~~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~  270 (300)
T 2zyq_A          209 -TSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCE  270 (300)
T ss_dssp             -CSSSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEEC
T ss_pred             -CCCCceEEEEEeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeC
Confidence             12457899999998666   5999999999876432     236789999999999999874

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.80  E-value=5.6e-19  Score=118.52  Aligned_cols=109  Identities=17%  Similarity=0.170  Sum_probs=84.1

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCceEEE
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTC   85 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~hi~   85 (132)
                      ++++++||.|.|+|++++++||+++|||+.......     ..+++..++  ..+.+......         ..+..|++
T Consensus         4 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~-----~~~~l~~~~~~~~~~l~~~~~~---------~~~~~~~~   69 (307)
T 1mpy_A            4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ-----GRVYLKAWTEVDKFSLVLREAD---------EPGMDFMG   69 (307)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT-----SCEEEECTTCCBSCSEEEEECS---------SCEEEEEE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCEEEeecCC-----CcEEEEecCCCCceEEEEccCC---------CCCcceEE
Confidence            588999999999999999999999999999875431     225666633  22333322211         13578999


Q ss_pred             EEE---CCHHHHHHHHHhCCCeEEccC-----CCccEEEEeCCCCCeEEEEee
Q 032856           86 IAI---RDVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        86 ~~v---~d~~~~~~~l~~~g~~~~~~~-----~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      |.|   +|+++++++|+++|+++...+     .+++.++|.||+||.|||++.
T Consensus        70 f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  122 (307)
T 1mpy_A           70 FKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYAD  122 (307)
T ss_dssp             EEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESC
T ss_pred             EEeCCHHHHHHHHHHHHHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEc
Confidence            999   799999999999999876433     356899999999999999985

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.80  E-value=7e-19  Score=118.43  Aligned_cols=107  Identities=16%  Similarity=0.224  Sum_probs=83.4

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCceEE
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHT   84 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hi   84 (132)
                      ..+.+++|+.|.|+|++++.+||+++|||++.....     ...+|+..++.  .+.+...         +   .++.|+
T Consensus       137 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~-----~~~~fl~~~~~~~~l~l~~~---------~---~g~~hi  199 (310)
T 3b59_A          137 GVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLG-----DFMCFLRCNSAHHRIAILPG---------P---PCLNHV  199 (310)
T ss_dssp             CCCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEET-----TTEEEEESSSBSCSEEEEES---------S---SEEEEE
T ss_pred             CcCcEeceEEEecCCHHHHHHHHHhCCCCEEEEeeC-----CeEEEEecCCCcceEEEECC---------C---CceEEE
Confidence            467899999999999999999999999999886432     14567776543  2333321         1   347899


Q ss_pred             EEEECCHHHH---HHHHHhCCCeEEccC-----CCccEEEEeCCCCCeEEEEee
Q 032856           85 CIAIRDVSKL---KMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        85 ~~~v~d~~~~---~~~l~~~g~~~~~~~-----~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      +|.|+|++++   +++|+++|+++...+     ...+++|++||+||.||+.+.
T Consensus       200 ~f~v~d~d~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  253 (310)
T 3b59_A          200 AYDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSE  253 (310)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEEC
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeC
Confidence            9999998877   999999999875432     345789999999999999874

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.79  E-value=8.1e-19  Score=117.73  Aligned_cols=112  Identities=15%  Similarity=0.132  Sum_probs=79.5

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCC--CC-CceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCce
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KL-PYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDR   82 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~--~~-~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~   82 (132)
                      .+.+++||.|.|+|++++++|| ++|||+........  .. ....+|+..++.  .+.+..  .        ....+..
T Consensus       143 ~~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~--------~~~~~~~  211 (305)
T 2wl9_A          143 EGQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDRHHSLAFGV--G--------PMDKRIN  211 (305)
T ss_dssp             TTTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSSSCSEEECC--S--------CCSSSEE
T ss_pred             CCceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCCceEEEEec--C--------CCCCCce
Confidence            4578999999999999999999 99999986532211  11 123456665432  222221  1        0125678


Q ss_pred             EEEEEECC---HHHHHHHHHhCCCeEEccC-----CCccEEEEeCCCCCeEEEEee
Q 032856           83 HTCIAIRD---VSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        83 hi~~~v~d---~~~~~~~l~~~g~~~~~~~-----~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      |++|.|+|   +++++++|+++|+++...+     .+.+.+||+|||||.|||.+.
T Consensus       212 hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  267 (305)
T 2wl9_A          212 HLMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWG  267 (305)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeC
Confidence            99999998   5567889999999876432     235678999999999999874

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.79  E-value=5.9e-18  Score=114.88  Aligned_cols=111  Identities=18%  Similarity=0.307  Sum_probs=83.5

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIA   87 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   87 (132)
                      ..+.||.|.|+|++++.+||+++|||++.......    ..+|+..++.  .+.+.....      ......+..|++|.
T Consensus       158 ~~i~hv~L~v~Dl~~a~~FY~~vLG~~~~~~~~~~----~~~~l~~g~~~~~l~l~~~~~------~~~~~~~~~hiaf~  227 (330)
T 3zi1_A          158 DPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEK----QRALLGYADNQCKLELQGVKG------GVDHAAAFGRIAFS  227 (330)
T ss_dssp             CSEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTT----TEEEEESSTTSCEEEEEECSS------CCCCBTTCCEEEEE
T ss_pred             CceeEEEEECCCHHHHHHHHHHhcCCEEEeeccCC----cEEEEEeCCceEEEEECCCCC------CCCCCCCCceEEEE
Confidence            35789999999999999999999999998765422    2467777654  333332221      11123456799999


Q ss_pred             EC--CHHHHHHHHHhCCCeEEcc--------CCCccEEEEeCCCCCeEEEEee
Q 032856           88 IR--DVSKLKMILDKAGISYTLS--------KSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        88 v~--d~~~~~~~l~~~g~~~~~~--------~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      |+  |+++++++|+++|+++...        ..+.+.+||+|||||.|||++.
T Consensus       228 v~~~dld~~~~rl~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~  280 (330)
T 3zi1_A          228 CPQKELPDLEDLMKRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGD  280 (330)
T ss_dssp             ECGGGHHHHHHHHHHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEH
T ss_pred             EEcccHHHHHHHHHHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEe
Confidence            96  8999999999999986432        2356899999999999999875

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.78  E-value=1.3e-17  Score=111.03  Aligned_cols=114  Identities=15%  Similarity=0.110  Sum_probs=82.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEEC
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR   89 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~   89 (132)
                      ..+.|+.|.|+|++++++||+++|||+.......+.  ...+.+..++..+..+. ...      +.......|++|.|+
T Consensus       163 ~~~~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~v~  233 (282)
T 3oxh_A          163 GTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAG--QNYRVLKAGDAEVGGCM-EPP------MPGVPNHWHVYFAVD  233 (282)
T ss_dssp             TSEEEEEEECSCHHHHHHHHHHHHCCEEEEC---------CEEEEETTEEEEEEE-CCS------STTCCSEEEEEEECS
T ss_pred             CccEEEEEEcCCHHHHHHHHHHHhCCeeeeccCCCC--cceEEEEcCCccEeeec-CCC------CCCCCCeEEEEEEeC
Confidence            568999999999999999999999999876431111  13345566654433221 111      111123468999999


Q ss_pred             CHHHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEeeCC
Q 032856           90 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVDG  132 (132)
Q Consensus        90 d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~~~~  132 (132)
                      |+++++++++++|+++..+    +.+++.++++||+||.|||++..+
T Consensus       234 dvd~~~~~~~~~G~~~~~~p~~~~~~~~~~~~~DPdGn~~~l~~~~~  280 (282)
T 3oxh_A          234 DADATAAKAAAAGGQVIAEPADIPSVGRFAVLSDPQGAIFSVLKAAP  280 (282)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEEC-
T ss_pred             CHHHHHHHHHHcCCEEecCCeEcCCCeEEEEEECCCCCEEEEEecCC
Confidence            9999999999999998543    345789999999999999999753

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.77  E-value=1.6e-18  Score=116.22  Aligned_cols=112  Identities=14%  Similarity=0.150  Sum_probs=78.0

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCC--CC-CceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCce
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KL-PYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDR   82 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~--~~-~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~   82 (132)
                      ..++++|+.|.|+|++++++|| ++|||+........  .. ....+|+..++.  .+.+.  ..+        ...+..
T Consensus       146 ~~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~--------~~~~~~  214 (302)
T 2ehz_A          146 GDQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNARDHSIAFG--AMP--------AAKRLN  214 (302)
T ss_dssp             GGGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSBSCSEEEC--SCC--------CSSSEE
T ss_pred             CCCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCCCcEEEEe--cCC--------CCCcee
Confidence            3458999999999999999999 99999876432110  11 123455555432  12221  111        125678


Q ss_pred             EEEEEECCHHH---HHHHHHhCCCeEEccC-----CCccEEEEeCCCCCeEEEEee
Q 032856           83 HTCIAIRDVSK---LKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        83 hi~~~v~d~~~---~~~~l~~~g~~~~~~~-----~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      |++|.|+|+++   ++++|+++|+++..++     .+.+.+||+||+||.|||.+.
T Consensus       215 hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~  270 (302)
T 2ehz_A          215 HLMLEYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWR  270 (302)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEEC
Confidence            99999998775   5779999999876432     245678999999999999864

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.77  E-value=2.5e-18  Score=114.62  Aligned_cols=113  Identities=17%  Similarity=0.213  Sum_probs=80.4

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCC--CC-CceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCc
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KL-PYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRD   81 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~--~~-~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~   81 (132)
                      +.+++++|++|.|+|++++++||+++|||++.......  .. ....+|+..++.  .+.+...  +        ...+.
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~~  207 (292)
T 1kw3_B          138 TGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAF--P--------IPKRI  207 (292)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECC--S--------CSSSE
T ss_pred             cCCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCCcceEEEecC--C--------CCCce
Confidence            45789999999999999999999999999987532211  00 123456665432  2333321  1        02567


Q ss_pred             eEEEEEECCHHH---HHHHHHhCCCeEEccC-----CCccEEEEeCCCCC-eEEEEee
Q 032856           82 RHTCIAIRDVSK---LKMILDKAGISYTLSK-----SGRPAIFTRDPDAN-ALEFTQV  130 (132)
Q Consensus        82 ~hi~~~v~d~~~---~~~~l~~~g~~~~~~~-----~~~~~~~~~Dp~G~-~iel~~~  130 (132)
                      .|++|.|+|+++   ++++|+ +|+++...+     ...+++||+||+|| .|||.+.
T Consensus       208 ~hiaf~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~  264 (292)
T 1kw3_B          208 HHFMLQANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWG  264 (292)
T ss_dssp             EEEEEEBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEEC
T ss_pred             EEEEEEcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEEC
Confidence            899999998766   577999 999876443     23567899999999 9999874

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.77  E-value=3.6e-18  Score=114.14  Aligned_cols=112  Identities=13%  Similarity=0.244  Sum_probs=80.8

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCC---CCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCce
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD---KLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDR   82 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~---~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~   82 (132)
                      .+.+++|+.|.|+|++++++||+++|||++.......   ......+|+..++.  .+.+...  +        ...+..
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~--~--------~~~~~~  208 (297)
T 1lgt_A          139 GEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHTLAIAAF--P--------LPKRIH  208 (297)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECC--C--------CSSSEE
T ss_pred             CccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCCcceEEEEcC--C--------CCCCce
Confidence            4678999999999999999999999999987532110   00123456655432  3444321  1        125678


Q ss_pred             EEEEEECCHHHHH---HHHHhCCCeEEccC----C-CccEEEEeCCCCCeEEEEee
Q 032856           83 HTCIAIRDVSKLK---MILDKAGISYTLSK----S-GRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        83 hi~~~v~d~~~~~---~~l~~~g~~~~~~~----~-~~~~~~~~Dp~G~~iel~~~  130 (132)
                      |++|.|+|++++.   ++ +++|+++...+    . ..+++||+|||||.|||++.
T Consensus       209 hiaf~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  263 (297)
T 1lgt_A          209 HFMLEVASLDDVGFAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWS  263 (297)
T ss_dssp             EEEEEBSCHHHHHHHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEEC
T ss_pred             EEEEeCCCHHHHHHHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecC
Confidence            9999999988876   88 99999876432    2 24568999999999999875

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.76  E-value=4.9e-18  Score=116.31  Aligned_cols=126  Identities=14%  Similarity=0.253  Sum_probs=90.4

Q ss_pred             CceeeeeeeEEEEeC--CHHHHHHHHHhhcCCeeeccCC--CCCCCceeEEEEeC--CeEEEEEecCCCCCCC--C---C
Q 032856            6 DYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARP--HDKLPYRGAWLWVG--AEMIHLMELPNPDPLS--G---R   74 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~--d~~~~~~fy~~~lg~~~~~~~~--~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~--~---~   74 (132)
                      .+.+++++|+++.|+  |++++.+||+++|||+.....+  .+......+++..+  ...+.+..........  .   .
T Consensus       153 ~~~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~g~~~l~l~~~~~~~~~~~~~~~~~  232 (357)
T 2r5v_A          153 DVDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSASGAVTLTLIEPDRNADPGQIDEFLK  232 (357)
T ss_dssp             TCCCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTTSCCEEEEEEECTTSBCCHHHHHHH
T ss_pred             CCCcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCCCCEEEEEeeecCCCCCchhHHHHH
Confidence            356889999999999  9999999999999999875421  11222355667664  3467776654321100  0   0


Q ss_pred             CCCCCCceEEEEEECCHHHHHHHHHhCCCeEEccCC------Cc---------------cEEEEeCCCCCeEEEEeeC
Q 032856           75 PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS------GR---------------PAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        75 ~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~~------~~---------------~~~~~~Dp~G~~iel~~~~  131 (132)
                      ...+.++.|+||.|+|+++++++|+++|+++...+.      +.               ..+|++||+|+.+||++.+
T Consensus       233 ~~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~~  310 (357)
T 2r5v_A          233 DHQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTAS  310 (357)
T ss_dssp             HHTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBCC
T ss_pred             hcCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEccC
Confidence            012357899999999999999999999998765431      11               3799999999999999853

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.75  E-value=2.1e-16  Score=97.67  Aligned_cols=119  Identities=11%  Similarity=0.081  Sum_probs=78.4

Q ss_pred             eeeeeEEEEeCC--HHHHHHHHHhhcCCeeeccC-------CCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCC-C
Q 032856           10 VSVHHVGILCEN--LERSLEFYQNILGLEINEAR-------PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG-G   79 (132)
Q Consensus        10 ~~~~hv~i~v~d--~~~~~~fy~~~lg~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~   79 (132)
                      ..-.+..|.|+|  +++|++||+++||+++....       .........+.+..++..+.+.........  ....+ .
T Consensus        23 ~~~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g~~l~l~~~~~~~~~--~~~~~~~  100 (166)
T 1xy7_A           23 FTEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGF--STAKSEG  100 (166)
T ss_dssp             EEEEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTTC--CCCCTTS
T ss_pred             CceEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEECCeEEEEeCCCcccCC--ccccCCC
Confidence            345678899999  99999999999999987533       111112233446667766655432111000  01110 1


Q ss_pred             CceEEEEEECCHHHHHHHHHhCCCeEEccCC-----CccEEEEeCCCCCeEEEEeeC
Q 032856           80 RDRHTCIAIRDVSKLKMILDKAGISYTLSKS-----GRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~~-----~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      ...|++|.|+|+++++++|+++|++ ..++.     ..+.++++||+||.|+|.+..
T Consensus       101 ~g~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~~r~~~v~DP~G~~~~l~~~~  156 (166)
T 1xy7_A          101 SGVTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVELGFKGKVTDPFGVTWIFAEKK  156 (166)
T ss_dssp             CCCEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHTTEEEEEECTTSCEEEEEC--
T ss_pred             CcEEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcccEEEEEECCCCCEEEEEeec
Confidence            2248999999999999999999998 65431     167999999999999998753

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.73  E-value=4.8e-17  Score=111.74  Aligned_cols=114  Identities=17%  Similarity=0.247  Sum_probs=84.1

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   86 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   86 (132)
                      ..+.+++|+++.|+|++++.+||++ ||+..+............+|+..+...+.+.....+         ..+++|++|
T Consensus       148 ~~~~rlgHV~L~v~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~~hH~la~~~~~---------~~~lhHvaf  217 (365)
T 4ghg_A          148 GELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGTVHDTALTGGN---------GPRLHHVAF  217 (365)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSSSSCSEEEEESS---------BSEEEEEEE
T ss_pred             ccCcceeEEEEeecCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCCcccceeeecCC---------CCceeEEEE
Confidence            4678999999999999999999976 999987765544444456777776543333322221         256899999


Q ss_pred             EECCHHHH---HHHHHhCCCe--EEcc-----CCCccEEEEeCCCCCeEEEEee
Q 032856           87 AIRDVSKL---KMILDKAGIS--YTLS-----KSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        87 ~v~d~~~~---~~~l~~~g~~--~~~~-----~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      +|+|++++   .++|+++|+.  +..+     .+...++||+||+||.||+...
T Consensus       218 ~v~d~d~v~~~~d~l~~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~  271 (365)
T 4ghg_A          218 STHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQ  271 (365)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             ecCCHHHHHHHHHHHHhCCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcC
Confidence            99987775   6788899985  3332     2345779999999999999864

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.73  E-value=1e-16  Score=110.73  Aligned_cols=126  Identities=13%  Similarity=0.113  Sum_probs=91.8

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCC--CCCCceeEEEEeCCeEEEEEecCCCCCC----CCC--CC
Q 032856            5 GDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPH--DKLPYRGAWLWVGAEMIHLMELPNPDPL----SGR--PE   76 (132)
Q Consensus         5 ~~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~--~~   76 (132)
                      ..+.+++++||.|.|.|++++.+||++.|||+.......  .........+..++..+.+....++...    ...  ..
T Consensus        16 ~~~~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~~   95 (381)
T 1t47_A           16 DPFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAE   95 (381)
T ss_dssp             CCSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHH
T ss_pred             CCCcCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecCCEEEEEecCCCCCCcchhHHHHHHHh
Confidence            347789999999999999999999999999998875321  1112244555667777777764332211    000  01


Q ss_pred             CCCCceEEEEEECCHHHHHHHHHhCCCeEEccC------CC-ccEEEEeCCCCCeEEEEee
Q 032856           77 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK------SG-RPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        77 ~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~------~~-~~~~~~~Dp~G~~iel~~~  130 (132)
                      ++.++.|++|+|+|+++++++++++|+++...+      .+ .+.+.++||+|+.++|++.
T Consensus        96 ~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~  156 (381)
T 1t47_A           96 HGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDR  156 (381)
T ss_dssp             HCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEE
T ss_pred             cCCceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEec
Confidence            235788999999999999999999999886433      11 2567899999999999986

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.70  E-value=1.6e-15  Score=101.02  Aligned_cols=110  Identities=14%  Similarity=0.086  Sum_probs=78.1

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCC----eEEEEEecCCCCCCCCCCCCCCCceEEE
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTC   85 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~hi~   85 (132)
                      ....++.+.|+|+++|++||+++||++.......+  + ..+.+..++    ..+.+.....        ..++...+++
T Consensus       182 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~  250 (301)
T 2zw5_A          182 TLAVITELPVRDVAATLRLVEAALGARTAFAIGDP--P-EFAEAALTPWSAGPRFRLAAVPG--------PGPVEPVRLH  250 (301)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHHSCCEEEEEEETT--E-EEEEEESSSSSSSSEEEEEECCC--------SSCCCCCEEE
T ss_pred             cceeEEEEEeCCHHHHHHHHHHhcCCeEeeecCCC--c-cEEEEEcCCCccccccccccCCC--------cCCCCceEEE
Confidence            34568889999999999999999999987432211  1 223455554    2333321111        0112345799


Q ss_pred             EEEC-CHHHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEee
Q 032856           86 IAIR-DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        86 ~~v~-d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      |.|+ |+++++++++++|+++..+    +.|.+.++|+|||||.|+|.+.
T Consensus       251 ~~v~~dvd~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          251 LDAAGTADSLHRRAVDAGARVDGPPVRRPWGRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             EEcCccHHHHHHHHHHcCCccccCcccCCCcceEEEEECCCCCEEEeeCC
Confidence            9999 9999999999999987543    2356899999999999999875

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.68  E-value=1.7e-15  Score=103.67  Aligned_cols=123  Identities=15%  Similarity=0.092  Sum_probs=88.7

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCC--CCCCCCCceEE
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHT   84 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~hi   84 (132)
                      |.+++++||.|.|+|++++.+||++.|||+..........  ....+..++..+.+.....+.....  ...++.++.|+
T Consensus         1 ~~i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g--~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~g~g~~~i   78 (357)
T 2r5v_A            1 MQNFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADH--RSIALRQGQVTLVLTEPTSDRHPAAAYLQTHGDGVADI   78 (357)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTE--EEEEEEETTEEEEEEEESSTTSHHHHHHHHHSSEEEEE
T ss_pred             CCCceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCc--eEEEEEeCCEEEEEeCCCCCCCHHHHHHHhcCCeEEEE
Confidence            4578999999999999999999999999998765432211  3344566776666665322211000  00123578899


Q ss_pred             EEEECCHHHHHHHHHhCCCeEEccC----CC-ccEEEEeCCCCCeEEEEeeC
Q 032856           85 CIAIRDVSKLKMILDKAGISYTLSK----SG-RPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        85 ~~~v~d~~~~~~~l~~~g~~~~~~~----~~-~~~~~~~Dp~G~~iel~~~~  131 (132)
                      +|.|+|+++++++++++|+++...+    .+ ...+.++||+|..++|++..
T Consensus        79 af~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~  130 (357)
T 2r5v_A           79 AMATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRD  130 (357)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECC
T ss_pred             EEEECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecc
Confidence            9999999999999999999876432    22 35788999999999998753

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.68  E-value=8.7e-16  Score=107.26  Aligned_cols=126  Identities=13%  Similarity=0.129  Sum_probs=90.4

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCC--CCCceeEEEEeCCeEEEEEecCCCCC------------C
Q 032856            6 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KLPYRGAWLWVGAEMIHLMELPNPDP------------L   71 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~------------~   71 (132)
                      .+.+++++||.|.|.|+++|++||++.|||++.......  ......+++..++..+.|.....+..            .
T Consensus        20 ~~~i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g~~~l~L~~~~~~~~~~~~~~~~~~~p~   99 (424)
T 1sqd_A           20 KFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASI   99 (424)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSS
T ss_pred             cccCCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCCCEEEEEecCCCCccccccccccccccc
Confidence            477899999999999999999999999999987653321  12224455666777777776633210            0


Q ss_pred             CCC---------CCCCCCceEEEEEECCHHHHHHHHHhCCCeEEccC----CCccEEEEeCCCCCeEEEEeeC
Q 032856           72 SGR---------PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        72 ~~~---------~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~----~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      +..         ..++.++.|+||+|+|+++++++++++|+++...+    .......+++|+|..++|++..
T Consensus       100 ~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~~~~~~~i~~~Gg~~~~lvd~~  172 (424)
T 1sqd_A          100 PSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYK  172 (424)
T ss_dssp             TTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEEC
T ss_pred             ccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCCceEEEEEEcCCCcEEEEEecC
Confidence            000         01236789999999999999999999999876533    2335667778888888887654

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.65  E-value=2.4e-15  Score=103.89  Aligned_cols=125  Identities=14%  Similarity=0.128  Sum_probs=87.8

Q ss_pred             ceeeeeeeEEEEeC--CHHHHHHHHHhhcCCeeeccCC-----CCCCCceeEEEEeC--CeEEEEEecCCCCCCCC----
Q 032856            7 YGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARP-----HDKLPYRGAWLWVG--AEMIHLMELPNPDPLSG----   73 (132)
Q Consensus         7 ~~~~~~~hv~i~v~--d~~~~~~fy~~~lg~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~----   73 (132)
                      ..+.+++|+++.|+  |++++.+||+++|||+.....+     .+.......++..+  ...+.+...........    
T Consensus       180 ~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~g~v~i~l~~~~~~~~~s~~~~~  259 (381)
T 1t47_A          180 RTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEY  259 (381)
T ss_dssp             CSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHH
T ss_pred             CCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCCCcEEEEEecCCcCCCccHHHHH
Confidence            56889999999999  9999999999999999876532     22233345555443  33566665542111100    


Q ss_pred             -CCCCCCCceEEEEEECCHHHHHHHHHhCCCeEEccCCC---------------------ccEEEEeCCCCCeEEEEeeC
Q 032856           74 -RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSG---------------------RPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        74 -~~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~~~---------------------~~~~~~~Dp~G~~iel~~~~  131 (132)
                       ....+.++.|+||.|+|+++++++|+++|+++...+..                     ...++-.||+|..+++++.+
T Consensus       260 l~~~~g~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~d~~g~llqift~~  339 (381)
T 1t47_A          260 LEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDEDGYLLQIFTKP  339 (381)
T ss_dssp             HHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEECSSCEEEEEEBCC
T ss_pred             HHHhCCCCcceEEEecCCHHHHHHHHHHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEeeCCCCeEEEEeccC
Confidence             00134678999999999999999999999998654321                     12467789999888887754

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.64  E-value=3.3e-14  Score=86.30  Aligned_cols=112  Identities=14%  Similarity=0.032  Sum_probs=75.2

Q ss_pred             eEEEEeC-CHHHHHHHHHhhcCCeeeccCC---C------C-C--CCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCC
Q 032856           14 HVGILCE-NLERSLEFYQNILGLEINEARP---H------D-K--LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGR   80 (132)
Q Consensus        14 hv~i~v~-d~~~~~~fy~~~lg~~~~~~~~---~------~-~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~   80 (132)
                      +..|.|. |+++|++||+++||+++.....   .      + .  .....+.+..++..+.+.... +..  ..+. ..+
T Consensus         6 ~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~l~~~d~~-~~~--~~~~-~~g   81 (149)
T 1u6l_A            6 VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNH-PAY--PYEG-IKG   81 (149)
T ss_dssp             EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECC-TTS--CCCC-CCS
T ss_pred             EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECCEEEEEEcCC-Ccc--CCCC-CCc
Confidence            4778898 9999999999999999875311   0      0 0  122234466677665554321 110  1111 122


Q ss_pred             ceEEEEEECC---HHHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEeeC
Q 032856           81 DRHTCIAIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        81 ~~hi~~~v~d---~~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                       .+++|.|+|   +++++++|+ +|.++..+    +.+.+.++++||+|+.|+|.+..
T Consensus        82 -~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~wG~r~~~v~Dp~G~~w~l~~~~  137 (149)
T 1u6l_A           82 -CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCEQ  137 (149)
T ss_dssp             -EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETTEEEEEEEECTTSCEEEEEESC
T ss_pred             -eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCcccceEEEECCCCCEEEEEEec
Confidence             489999998   778899985 78877543    34568889999999999998753

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.63  E-value=5.5e-14  Score=84.01  Aligned_cols=113  Identities=12%  Similarity=0.101  Sum_probs=76.8

Q ss_pred             eeeeEEEEeC--CHHHHHHHHHhhc-CCeeecc--CCC----CCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCc
Q 032856           11 SVHHVGILCE--NLERSLEFYQNIL-GLEINEA--RPH----DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRD   81 (132)
Q Consensus        11 ~~~hv~i~v~--d~~~~~~fy~~~l-g~~~~~~--~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   81 (132)
                      ++. ..|.+.  |+++|++||+++| |+++...  ...    .......+.+.+++..+.+........   ..  ....
T Consensus         6 ~i~-~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~~~---~~--~~~~   79 (136)
T 1u7i_A            6 RVR-PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVRHA---FD--FTPA   79 (136)
T ss_dssp             EEE-EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSCCS---CC--CCTT
T ss_pred             cce-EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECCEEEEEECCCCCCC---CC--CCCc
Confidence            444 667886  9999999999999 9998741  111    111222344667776555443321111   11  1222


Q ss_pred             eEEEEEECC---HHHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEee
Q 032856           82 RHTCIAIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        82 ~hi~~~v~d---~~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      ..++|.|+|   +++++++++ +|.++..+    +.+.+.++++||+|+.|+|.+.
T Consensus        80 ~~l~~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G~~~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           80 FSFFVDCESNAQIERLAEALS-DGGKALMPLGDYGFSQRFAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             EEEEEECCCHHHHHHHHHHHH-TTSEEEEEEECCSSSSEEEEEECTTSCEEEEEEC
T ss_pred             eEEEEEcCCHHHHHHHHHHHH-cCCEEecccccCCCcceEEEEECCCCCEEEEEec
Confidence            479999999   999999999 99887643    3466888999999999999874

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.62  E-value=1.6e-14  Score=100.69  Aligned_cols=125  Identities=14%  Similarity=0.130  Sum_probs=87.9

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCC--CCceeEEEEeCCeEEEEEecCCCCC------CCC---C
Q 032856            6 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK--LPYRGAWLWVGAEMIHLMELPNPDP------LSG---R   74 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~------~~~---~   74 (132)
                      .+.+++++||.|.|.|++++.+||++.|||++........  .....+.+..|+..+.|.....+..      .+.   .
T Consensus        26 ~~~i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G~~~l~L~~~~~~~~~~~~~p~~~~~~~  105 (418)
T 1sp8_A           26 RFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSAA  105 (418)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCHH
T ss_pred             cccCceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeCCEEEEEecCCCCcccccccccccccch
Confidence            4678999999999999999999999999998876533221  1234555677887888876643311      000   0


Q ss_pred             ------CCCCCCceEEEEEECCHHHHHHHHHhCCCeEEccC----CCccEEEEeCCCCCeEEEEee
Q 032856           75 ------PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        75 ------~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~----~~~~~~~~~Dp~G~~iel~~~  130 (132)
                            ..++.++.|++|+|+|+++++++++++|+++...+    +..+...+++|+|..+.|++.
T Consensus       106 ~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~~~~~~~i~~~Gg~~~~lvd~  171 (418)
T 1sp8_A          106 AARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSY  171 (418)
T ss_dssp             HHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEEC
T ss_pred             hHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccCceEEEEEecCCCEEEEEEcc
Confidence                  01236789999999999999999999999876533    222344556667777766654

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.60  E-value=7.6e-16  Score=105.52  Aligned_cols=126  Identities=13%  Similarity=0.083  Sum_probs=86.2

Q ss_pred             CceeeeeeeEEEEeC--CHHHHHHHHHhhcCCeeeccCCCC--CCCc--eeEEEEeCCeEEEEEec-CCCCCCCC---CC
Q 032856            6 DYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARPHD--KLPY--RGAWLWVGAEMIHLMEL-PNPDPLSG---RP   75 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~--d~~~~~~fy~~~lg~~~~~~~~~~--~~~~--~~~~~~~~~~~~~l~~~-~~~~~~~~---~~   75 (132)
                      ...+.+++||++.|+  |++++.+||+++|||++.......  ..+.  ..+++..+...+.|... ........   ..
T Consensus       153 ~~~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~~~~~~~~~~~~~~~~  232 (357)
T 1cjx_A          153 GAGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQ  232 (357)
T ss_dssp             TTSEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHH
T ss_pred             CCCeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCCCCEEEEEeeecCCCCChHHHhHHh
Confidence            357899999999999  999999999999999987643211  1111  12222234557777765 22211100   00


Q ss_pred             CCCCCceEEEEEECCHHHHHHHHHhCCCeEEc-cC-------------CCc--------cEEEEeC----CCCCeEEEEe
Q 032856           76 EHGGRDRHTCIAIRDVSKLKMILDKAGISYTL-SK-------------SGR--------PAIFTRD----PDANALEFTQ  129 (132)
Q Consensus        76 ~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~-~~-------------~~~--------~~~~~~D----p~G~~iel~~  129 (132)
                      ..+.++.|+||.|+|+++++++|+++|+++.. .+             .+.        ..++-.|    |+|+.+++++
T Consensus       233 ~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqift  312 (357)
T 1cjx_A          233 FNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQIFS  312 (357)
T ss_dssp             HTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEEEB
T ss_pred             cCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEEec
Confidence            13467899999999999999999999998765 33             111        1467788    8899999887


Q ss_pred             eC
Q 032856          130 VD  131 (132)
Q Consensus       130 ~~  131 (132)
                      .+
T Consensus       313 ~~  314 (357)
T 1cjx_A          313 ET  314 (357)
T ss_dssp             CC
T ss_pred             cC
Confidence            54

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.60  E-value=8.1e-15  Score=101.28  Aligned_cols=126  Identities=14%  Similarity=0.114  Sum_probs=93.0

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCC-C-ceeEEEEeCCeEEEEEecCCCCC-CCCC--CCCCC
Q 032856            5 GDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKL-P-YRGAWLWVGAEMIHLMELPNPDP-LSGR--PEHGG   79 (132)
Q Consensus         5 ~~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~-~-~~~~~~~~~~~~~~l~~~~~~~~-~~~~--~~~~~   79 (132)
                      ..+.+++++||+|.|.|++++.+||++.|||+.......+.. . ...+.+..|+..+.|.....+.. ....  ..++.
T Consensus         5 ~~~~i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G~i~~~L~~p~~p~s~~~a~fl~~hG~   84 (393)
T 3isq_A            5 ERGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVFVLSSALNPWNKEMGDHLVKHGD   84 (393)
T ss_dssp             SSCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCS
T ss_pred             CCCCCceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecCCEEEEEecCCCCCchHHHHHHHhcCC
Confidence            457789999999999999999999999999999875332211 1 12445677888888877544432 1110  01346


Q ss_pred             CceEEEEEECCHHHHHHHHHhCCCeEEccC------CC-ccEEEEeCCCCCeEEEEee
Q 032856           80 RDRHTCIAIRDVSKLKMILDKAGISYTLSK------SG-RPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~------~~-~~~~~~~Dp~G~~iel~~~  130 (132)
                      ++.|+||.|+|+++++++++++|+++..++      .+ .....+++|.|..+-|++.
T Consensus        85 Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr  142 (393)
T 3isq_A           85 GVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEK  142 (393)
T ss_dssp             EEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEE
T ss_pred             cEEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEecc
Confidence            789999999999999999999999876543      12 3567889999988888874

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.56  E-value=5.5e-15  Score=101.27  Aligned_cols=120  Identities=12%  Similarity=0.105  Sum_probs=85.1

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCC--CCCCCCce
Q 032856            5 GDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR--PEHGGRDR   82 (132)
Q Consensus         5 ~~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~   82 (132)
                      +++.+++++||.+.|+|++++.+|| +.|||++..+....    ....+..++..+.+..  .+......  ..++.++.
T Consensus         6 ~~~~i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~~~----~~~l~~~g~~~l~l~~--~~~~~~~~~~~~~g~gv~   78 (357)
T 1cjx_A            6 NPMGLMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHRSK----NVHLYRQGEINLILNN--EPNSIASYFAAEHGPSVC   78 (357)
T ss_dssp             CTTCEEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEESSS----SEEEEEETTEEEEEEC--CSSSHHHHHHHHHSSEEE
T ss_pred             CCcccceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeCCe----eEEEEecCCEEEEEEC--CCCchhhhhhhhcCCeEE
Confidence            4578999999999999999999999 78999988753311    2344566765554443  22110000  01236789


Q ss_pred             EEEEEECCHHHHHHHHHhCCCeEEccCCC---ccEEEEeCCCCCeEEEEeeC
Q 032856           83 HTCIAIRDVSKLKMILDKAGISYTLSKSG---RPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        83 hi~~~v~d~~~~~~~l~~~g~~~~~~~~~---~~~~~~~Dp~G~~iel~~~~  131 (132)
                      |++|+|+|+++++++++++|+++...+.+   .....+++|+|..++|++..
T Consensus        79 ~iaf~V~D~~~~~~~l~~~G~~~~~~~~~~g~~~~~~~~~~gg~~~~~vd~~  130 (357)
T 1cjx_A           79 GMAFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDRF  130 (357)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECCC
T ss_pred             EEEEEeCCHHHHHHHHHHcCCEEeecCCCCCcEEEEeeeCCCCeEEEEECCC
Confidence            99999999999999999999987654422   34567788888888887643

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.54  E-value=1.1e-13  Score=96.75  Aligned_cols=103  Identities=17%  Similarity=0.181  Sum_probs=74.0

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCC-----CCceeEEEEeC--CeEEEEEecCCC---CCCCCCC
Q 032856            6 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----LPYRGAWLWVG--AEMIHLMELPNP---DPLSGRP   75 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~-----~~~~~~~~~~~--~~~~~l~~~~~~---~~~~~~~   75 (132)
                      ...+.+++|+++.|.|++++.+||+++|||+.......+.     .+....++..+  ...+.+......   .+.....
T Consensus       197 ~~~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~~~l~l~e~~~~~~~~s~i~~f  276 (424)
T 1sqd_A          197 DYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQTY  276 (424)
T ss_dssp             CSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHHH
T ss_pred             cCCcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCCCcEEEEEecccccCCCcchhhhh
Confidence            3568899999999999999999999999999987653221     23455566543  346777665421   1111011


Q ss_pred             ---CCCCCceEEEEEECCHHHHHHHHHh----CCCeEEcc
Q 032856           76 ---EHGGRDRHTCIAIRDVSKLKMILDK----AGISYTLS  108 (132)
Q Consensus        76 ---~~~~~~~hi~~~v~d~~~~~~~l~~----~g~~~~~~  108 (132)
                         ..+.|+.||||.|+|+.++.++|++    +|+++...
T Consensus       277 l~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~  316 (424)
T 1sqd_A          277 LEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPS  316 (424)
T ss_dssp             HHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCC
T ss_pred             hhhcCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecC
Confidence               2356799999999999999999999    89988654

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.54  E-value=3.8e-13  Score=80.70  Aligned_cols=111  Identities=9%  Similarity=0.104  Sum_probs=73.3

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhc-CCeeecc--CCC----CCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCce
Q 032856           10 VSVHHVGILCENLERSLEFYQNIL-GLEINEA--RPH----DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDR   82 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~l-g~~~~~~--~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~   82 (132)
                      +++...-+.+.|.++|.+||+++| |+++...  ...    +......+.+.+++..+...... +.    ..   .. .
T Consensus         4 ~~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~~~~m~~d~~-~~----~~---~~-~   74 (139)
T 1tsj_A            4 PKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDAN-SG----TE---LP-I   74 (139)
T ss_dssp             CSEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC---------------C-C
T ss_pred             CceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECCEEEEEECCC-CC----CC---ce-E
Confidence            455555455569999999999999 9998742  111    11223344566777654443221 11    01   11 4


Q ss_pred             EEEEEECC---HHHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEee
Q 032856           83 HTCIAIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        83 hi~~~v~d---~~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      .+++.|+|   +++++++|. +|.++..+    +.|.+..+++||+|+.|+|...
T Consensus        75 sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~  128 (139)
T 1tsj_A           75 SLFVTVKDTIEMERLFNGLK-DEGAILMPKTNMPPYREFAWVQDKFGVSFQLALP  128 (139)
T ss_dssp             CEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             EEEEECCCHHHHHHHHHHHh-CCCEEeecccccCCCceEEEEECCCCCEEEEeec
Confidence            68999987   677789998 68887643    4577899999999999999864

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.52  E-value=2.2e-12  Score=79.80  Aligned_cols=112  Identities=13%  Similarity=-0.008  Sum_probs=77.5

Q ss_pred             eeEEEEeCCHHHHHHHHHhhcCCeeeccCCC---C-----------CCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCC
Q 032856           13 HHVGILCENLERSLEFYQNILGLEINEARPH---D-----------KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG   78 (132)
Q Consensus        13 ~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~---~-----------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   78 (132)
                      ....|.++|.++|.+||+++||.+.......   +           ......+.+.+++..+.+......     .... 
T Consensus        27 i~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g~~lm~~D~~g~-----~~~~-  100 (172)
T 3l20_A           27 LFPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLGVKVLCSDSFGR-----ADKI-  100 (172)
T ss_dssp             EEEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETTEEEEEEECTTC-----CCCC-
T ss_pred             EEEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECCEEEEEECCCCC-----CCCC-
Confidence            4556777799999999999999997543221   0           122355667888877776653211     1111 


Q ss_pred             CCceEEEEEE--------CCHHHHHHHHHhCC-CeEEcc----CCCccEEEEeCCCCCeEEEEee
Q 032856           79 GRDRHTCIAI--------RDVSKLKMILDKAG-ISYTLS----KSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        79 ~~~~hi~~~v--------~d~~~~~~~l~~~g-~~~~~~----~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      +....+++.+        +|+++++++|.+.| +++..+    +.+.+..+++||+|+.|+|...
T Consensus       101 ~~~~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG~r~g~v~DpfG~~W~i~~~  165 (172)
T 3l20_A          101 NNGISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWGGKMGVFTDKYGVRWMLHGQ  165 (172)
T ss_dssp             CSSEEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTSSEEEEEECTTSCEEEEEEE
T ss_pred             CCcEEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCCcEEEEEECCCCCEEEEEeC
Confidence            2224566666        57899999999999 677543    3577889999999999999764

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.51  E-value=2.1e-13  Score=95.12  Aligned_cols=103  Identities=15%  Similarity=0.161  Sum_probs=73.5

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCC-----CCceeEEEEeC--CeEEEEEecCCC---CCCCCCC
Q 032856            6 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----LPYRGAWLWVG--AEMIHLMELPNP---DPLSGRP   75 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~-----~~~~~~~~~~~--~~~~~l~~~~~~---~~~~~~~   75 (132)
                      ...+.+++|+++.|.|++++.+||+++|||+.......+.     .+....++..+  ...+.+......   .+.....
T Consensus       194 ~~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~i~l~l~e~~~~~~~~s~i~~f  273 (418)
T 1sp8_A          194 DYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTF  273 (418)
T ss_dssp             CCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHHH
T ss_pred             CCCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCCCcEEEEEeecccccCCCcchhhh
Confidence            3567899999999999999999999999999887543211     23455666653  346666655321   1100000


Q ss_pred             ---CCCCCceEEEEEECCHHHHHHHHHh----CCCeEEcc
Q 032856           76 ---EHGGRDRHTCIAIRDVSKLKMILDK----AGISYTLS  108 (132)
Q Consensus        76 ---~~~~~~~hi~~~v~d~~~~~~~l~~----~g~~~~~~  108 (132)
                         ..+.+++|+||.|+|++++.++|++    +|+++...
T Consensus       274 l~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~  313 (418)
T 1sp8_A          274 LDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAP  313 (418)
T ss_dssp             HHHHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCC
T ss_pred             hhccCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccC
Confidence               1356799999999999999999999    79988654

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.48  E-value=6.4e-12  Score=80.82  Aligned_cols=111  Identities=14%  Similarity=0.061  Sum_probs=76.0

Q ss_pred             eeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEE---EEE
Q 032856           11 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT---CIA   87 (132)
Q Consensus        11 ~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi---~~~   87 (132)
                      ...+.+|.|+|++++.+||+++|||++..+..      ..+.+..++....|+....+....   ....|+.|+   ++.
T Consensus        10 ~~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~~~~~~L~lEEsp~~~~---~~~~Glkh~a~i~i~   80 (244)
T 3e0r_A           10 VRIIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQTGLEKLVLEEAPSMRT---RKVEGRKKLARLIVK   80 (244)
T ss_dssp             EEEEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCEEEEEEECCTTTC---BCCCSSCSEEEEEEE
T ss_pred             EEEeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecCCCcceEEEEeCCCccc---ccccccceeeeEEEE
Confidence            35678999999999999999999999888655      445666644332333322222111   123567777   599


Q ss_pred             ECCHHHHHHHHHhCCCeEE--ccCCCccEEEEeCCCCCeEEEEeeC
Q 032856           88 IRDVSKLKMILDKAGISYT--LSKSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        88 v~d~~~~~~~l~~~g~~~~--~~~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      |++.+++..-|.. +.++.  -....+.++|+.||+||.||++...
T Consensus        81 vp~~~el~~lL~~-~~~~~~~~~gdhgyA~yl~dPEGn~ieiyae~  125 (244)
T 3e0r_A           81 VENPLEIEGILSK-TDSIHRLYKGQNGYAFEIFSPEDDLILIHAED  125 (244)
T ss_dssp             ESSHHHHHHHHTT-CSCCSEEEECSSSEEEEEECTTCCEEEEECCS
T ss_pred             cCCHHHHHHHHhc-ccccccccccCCcEEEEEECCCCCeEEEEEcC
Confidence            9988887776665 54442  2223455899999999999998654

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.47  E-value=2.5e-13  Score=93.92  Aligned_cols=102  Identities=11%  Similarity=0.050  Sum_probs=73.7

Q ss_pred             CceeeeeeeEEEEeCC--HHHHHHHHHhhcCCeeeccCC-----CCCCCceeEEEEeC--CeEEEEEecCCCCCC--CCC
Q 032856            6 DYGVVSVHHVGILCEN--LERSLEFYQNILGLEINEARP-----HDKLPYRGAWLWVG--AEMIHLMELPNPDPL--SGR   74 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d--~~~~~~fy~~~lg~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~--~~~   74 (132)
                      ...+.+++||++.|.|  ++++.+||+++|||+.....+     .+..+.++..+..+  ...+.|.+.......  ...
T Consensus       168 ~~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~g~v~i~L~ep~~~~~~s~I~~  247 (393)
T 3isq_A          168 KCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGKKKSQIQE  247 (393)
T ss_dssp             CCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTTSSCEEEEEEEECCSBCCHHHH
T ss_pred             CCCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCCCCEEEEEecCCCCCCCCHHHH
Confidence            3568999999999998  999999999999999876432     12233444455543  347778776542111  000


Q ss_pred             C---CCCCCceEEEEEECCHHHHHHHHHhCCCeEEc
Q 032856           75 P---EHGGRDRHTCIAIRDVSKLKMILDKAGISYTL  107 (132)
Q Consensus        75 ~---~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~  107 (132)
                      .   ..+.|+.|+||.|+|+.+++++|+++|+++..
T Consensus       248 fL~~~~G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~  283 (393)
T 3isq_A          248 YVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLS  283 (393)
T ss_dssp             HHHHHTSSEEEEEEEEESCHHHHHHHHHHTTCCBCC
T ss_pred             HHHHcCCCCcceEEEEcCCHHHHHHHHHHcCCccCC
Confidence            0   13567999999999999999999999998754

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.40  E-value=3.9e-11  Score=71.78  Aligned_cols=110  Identities=9%  Similarity=0.036  Sum_probs=75.2

Q ss_pred             eEEEEeC-CHHHHHHHHHhhcC-Ceeecc--CC----CCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEE
Q 032856           14 HVGILCE-NLERSLEFYQNILG-LEINEA--RP----HDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC   85 (132)
Q Consensus        14 hv~i~v~-d~~~~~~fy~~~lg-~~~~~~--~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~   85 (132)
                      ...|.++ |.++|.+||+++|| .++...  ..    ........+.+.+++..+.+.........    . .+...+++
T Consensus        12 ~P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g~~lm~~d~~~~~~~----~-~~~~~~l~   86 (138)
T 3oms_A           12 TTFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNGQEFMCIDSYVNHNF----T-FTPAMSLY   86 (138)
T ss_dssp             CEEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEECSSCCSC----C-CCTTSCEE
T ss_pred             EEEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEECCEEEEEEcCCCCCCC----C-CCCCEEEE
Confidence            3456677 89999999999999 565421  11    12233456678888877776643322111    1 11234699


Q ss_pred             EEECC---HHHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEe
Q 032856           86 IAIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        86 ~~v~d---~~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~  129 (132)
                      +.|+|   +++++++|. .|.++..+    +.+.+..+++||+|+.|.|..
T Consensus        87 l~~~d~~evd~~~~~l~-~Gg~v~~p~~~~~wg~~~~~~~Dp~G~~W~i~~  136 (138)
T 3oms_A           87 VTCETEEEIDTVFHKLA-QDGAILMPLGSYPFSKKFGWLNDKYGVSWQLTL  136 (138)
T ss_dssp             EEESSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEE
T ss_pred             EEcCCHHHHHHHHHHHH-cCCeEecCcccccCCcEEEEEECCCCCEEEEEe
Confidence            99999   899999995 57776543    356788999999999999875

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.85  E-value=3.2e-07  Score=56.15  Aligned_cols=103  Identities=12%  Similarity=0.026  Sum_probs=69.3

Q ss_pred             EEEEeC-CHHHHHHHHHhhc-CCeeec--cCCC-----CCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEE
Q 032856           15 VGILCE-NLERSLEFYQNIL-GLEINE--ARPH-----DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC   85 (132)
Q Consensus        15 v~i~v~-d~~~~~~fy~~~l-g~~~~~--~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~   85 (132)
                      ..|..+ |.++|.+||+++| |.++..  +.+.     +......+.+.+++..+.+.... + .   ...  ..-.+++
T Consensus         9 PyL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g~~~m~~d~~-p-~---~~~--~~~~sl~   81 (163)
T 1u69_A            9 ICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGG-P-A---FRH--SEAFSFQ   81 (163)
T ss_dssp             EEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEECC-T-T---CCC--CTTEEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECCEEEEEECCC-C-C---cCC--CCceEEE
Confidence            345666 9999999999999 988763  2211     12334556688888766665421 1 1   111  1123688


Q ss_pred             EEECC---HHHHHHHHHhCCCeEEccCCCccEEEEeCCCCCeEEEEee
Q 032856           86 IAIRD---VSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        86 ~~v~d---~~~~~~~l~~~g~~~~~~~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      +.++|   ++.+.++|.+.|.++.      +...++||.|+.|.|...
T Consensus        82 v~~~d~~e~d~~~~~L~~~Gg~v~------~~G~v~D~fGv~W~i~~~  123 (163)
T 1u69_A           82 VATDDQAETDRLWNAIVDNGGEES------ACGWCRDKWGISWQITPR  123 (163)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCEEC------STTEEECTTSCEEEEEEH
T ss_pred             EEeCCHHHHHHHHHHHHhCCCEEE------EEEEEECCCCCEEEEEeE
Confidence            88887   5666889987788766      334899999999998753

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=98.71  E-value=9.3e-08  Score=71.89  Aligned_cols=122  Identities=19%  Similarity=0.242  Sum_probs=77.6

Q ss_pred             ceeeeeeeEEEEe---CCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeC--CeEEEEEecCCCCC-----------
Q 032856            7 YGVVSVHHVGILC---ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDP-----------   70 (132)
Q Consensus         7 ~~~~~~~hv~i~v---~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~-----------   70 (132)
                      +.+.+...+.+..   .-++++.+||.+.+++.........   .-.+++...  ...+++........           
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (941)
T 3opy_B            5 SLFNGTSFITLFAPNISLLQASIDFYTNFLGFAIRKNSNQK---LFWLQLEEDQNNVSIQLILDPEHAASVSQIDQNIRN   81 (941)
T ss_dssp             CCSCEEEEEEEECCC-CC-HHHHHHHHHTTCCEECSSCSCC---C---EECCTTSCCEEEEECSSCSCHHHHHHHHHHHC
T ss_pred             ceecceeEEEEEeCCHHHHHHHHHHHHhhccceeccccCCc---ceeEEEecCCCeEEEEEEeccccchhHHHHHHHHhh
Confidence            4566777777765   5789999999999999876643310   112334222  23455543311100           


Q ss_pred             CCC--CCCC-CCCceEEEEEECCHHHHHHHHHhCCCeEEccCC--CccEEEEeCCCCCeEEEEeeC
Q 032856           71 LSG--RPEH-GGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS--GRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        71 ~~~--~~~~-~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~~--~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      ...  .... .+...|+.|.+.|++++.++|.+.+.++...|+  +...+|..||+||.|+|.+..
T Consensus        82 ~~~~~~~~dW~~~~~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~~~e~yt~DPlGNvIgfs~~~  147 (941)
T 3opy_B           82 LTRSLYRKDWRSIQSNIAFKSSSLSKLVKLLKDGGHPVQQSPNEISPFEVYTVDPLGSLIGFSGFK  147 (941)
T ss_dssp             CC----------CCCEEEEEESCHHHHHHHHHTTTCCCBCSSSSCSCEEECCSSCCEEEECC-CCS
T ss_pred             hhcccccccccccCceEEEEeCCHHHHHHHHHhcCCccccCCCcCCCceEEeECCCCCEEEEeccC
Confidence            000  0011 122349999999999999999999998877665  778999999999999987653

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=98.64  E-value=4e-08  Score=64.91  Aligned_cols=92  Identities=12%  Similarity=0.218  Sum_probs=67.1

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcC-----CeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCC----------C-
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILG-----LEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD----------P-   70 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----------~-   70 (132)
                      .|..+++|+.+.|.+++        .||     +.+......+..+.....+.+++..++++...+..          . 
T Consensus        20 ~M~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~fdg~YLElIai~~~~~~~~~~~~~~~~   91 (274)
T 3p8a_A           20 HMILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYINENYIELLDVENNEKLKKMAKTIEGG   91 (274)
T ss_dssp             -CCCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEECSSSEEEEEEESCHHHHHHHTTSTGGG
T ss_pred             CccccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEeeCCEEEEEEeecCcccccccccccCcc
Confidence            46789999999999884        356     77665444445566666677788899999876531          1 


Q ss_pred             -CCCC----CCCCCCceEEEEEECCHHHHHHHHHhCCCeEE
Q 032856           71 -LSGR----PEHGGRDRHTCIAIRDVSKLKMILDKAGISYT  106 (132)
Q Consensus        71 -~~~~----~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~  106 (132)
                       ....    ...+.++.++++.|+|+++..++|+++|+.+.
T Consensus        92 ~~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~  132 (274)
T 3p8a_A           92 VAFATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVV  132 (274)
T ss_dssp             TCTTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEE
T ss_pred             chHHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcC
Confidence             1110    13356899999999999999999999999764

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=97.68  E-value=0.00013  Score=47.10  Aligned_cols=90  Identities=9%  Similarity=0.083  Sum_probs=60.6

Q ss_pred             eeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEEC-
Q 032856           11 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-   89 (132)
Q Consensus        11 ~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~-   89 (132)
                      .+ ||.|.|.|.+++  ||++ +|+                     +..+.+++..+++.. ..+...-++..+.|.|+ 
T Consensus       152 ti-~I~LnV~d~~~s--Fy~~-~~~---------------------~~~~~F~~a~G~dl~-~~~~~t~gLe~l~~~v~~  205 (244)
T 3e0r_A          152 EI-SMELHLPTDIES--FLES-SEI---------------------GASLDFIPAQGQDLT-VDNTVTWDLSMLKFLVNE  205 (244)
T ss_dssp             EE-EEEEEECTTCCC--SCCH-HHH---------------------TTTEEEEECCCTTTT-CCTTSBSSEEEEEEEESS
T ss_pred             EE-EEEEEcCchHHH--Hhhc-cCC---------------------cccEEEEcccCCCCC-CCCCCccCceEEEEEeCH
Confidence            36 999999999988  9986 433                     111333333333222 23333456778888886 


Q ss_pred             -CHHHHHHHHHhCCCeEEccCCCccEEEEeCCCCCeEEEEe
Q 032856           90 -DVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        90 -d~~~~~~~l~~~g~~~~~~~~~~~~~~~~Dp~G~~iel~~  129 (132)
                       |+.++.++|++.|.-+..   ....+.+.||.|+.|-|.+
T Consensus       206 ~dl~~l~~~L~~~g~~idk---k~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          206 LDIASLRQKFESTEYFIPK---SEKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             CCHHHHHHHTTTSCEECCT---TCCEEEEECTTSCEEEEEE
T ss_pred             HHHHHHHHHHHhCCceEcc---cCCEEEEECCCCCEEEEEE
Confidence             788999999998773222   3457889999999887764

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=97.37  E-value=0.0026  Score=41.47  Aligned_cols=34  Identities=12%  Similarity=0.182  Sum_probs=30.8

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccC
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEAR   41 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~   41 (132)
                      ..+.+++||+|.|.|++++.+|| +.||++...+.
T Consensus       154 ~~i~glghV~L~v~d~~~~~~fl-~~LG~~~~~~~  187 (252)
T 3pkv_A          154 DQLLSIGEINITTSDVEQAATRL-KQAELPVKLDQ  187 (252)
T ss_dssp             GGCCEEEEEEEECSCHHHHHHHH-HHTTCCCCGGG
T ss_pred             HHCcEeeeEEEEeCCHHHHHHHH-HHcCCCcccCC
Confidence            45789999999999999999999 99999998753

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=96.50  E-value=0.035  Score=32.48  Aligned_cols=54  Identities=11%  Similarity=0.164  Sum_probs=41.9

Q ss_pred             CCCceEEEEEECCHHHHHHHHHh-CCCeEEccC----------CCccEEEEeCCCCCeEEEEeeC
Q 032856           78 GGRDRHTCIAIRDVSKLKMILDK-AGISYTLSK----------SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        78 ~~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~----------~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      -.++.|+++.|.|++++.+.+++ .|+++....          ......++.-++|..++|.+.+
T Consensus        17 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~   81 (156)
T 3kol_A           17 LRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEP   81 (156)
T ss_dssp             SCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECT
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecC
Confidence            36789999999999999999998 899876521          1234577777788889988753

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=96.25  E-value=0.035  Score=30.77  Aligned_cols=50  Identities=20%  Similarity=0.294  Sum_probs=38.1

Q ss_pred             CceEEEEEECCHHHHHHHHHh-CCCeEEccCCCccEEEEeCCCCCeEEEEee
Q 032856           80 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      ++.|+.+.|.|++++.+.+.+ .|.+...... ....++..++|..+.+.+.
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~-~~~~~~~~~~~~~l~l~~~   53 (113)
T 1xqa_A            3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTRG-NAFAVMRDNDGFILTLMKG   53 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEET-TTEEEEECTTCCEEEEEEC
T ss_pred             eeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC-CcEEEEEcCCCcEEEEEeC
Confidence            478999999999999999987 8998765432 2446666667777887764

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=96.24  E-value=0.0092  Score=35.75  Aligned_cols=60  Identities=15%  Similarity=0.237  Sum_probs=42.7

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCC-CCCCCceeEEE---EeCCeEEEEEecCCCCC
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARP-HDKLPYRGAWL---WVGAEMIHLMELPNPDP   70 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~-~~~~~~~~~~~---~~~~~~~~l~~~~~~~~   70 (132)
                      .++.|++|.|.|++++.+...+ .|.++....+ ....+...+|+   ..++..++|++......
T Consensus        78 ~g~~Hiaf~V~Did~~~~~l~~-~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~~~~~~  141 (161)
T 3oa4_A           78 EGIHHIAIGVKSIEERIQEVKE-NGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEKKEQAE  141 (161)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHH-TTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEECCCCCC
T ss_pred             CCeEEEEEEECCHHHHHHHHHH-CCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEecCCccc
Confidence            4789999999999999999987 7988765422 11223355666   34567899988766543

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=96.13  E-value=0.028  Score=32.12  Aligned_cols=52  Identities=12%  Similarity=0.116  Sum_probs=38.3

Q ss_pred             CCceEEEEEECCHHHHHHHHHhCCCeEEcc----C-CCccEEEEeCCCCCeEEEEeeC
Q 032856           79 GRDRHTCIAIRDVSKLKMILDKAGISYTLS----K-SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~----~-~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      .++.|+++.|+|++++.+.++..|.+....    + .+.+..++.. ++..+||.+..
T Consensus         6 ~~i~hv~i~v~Dl~~a~~FY~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~   62 (133)
T 3hdp_A            6 LKVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVIN-GGYRVELVAPD   62 (133)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCEECSCCEEETTTTEEEEEEEE-TTEEEEEEEES
T ss_pred             eeeCEEEEEECCHHHHHHHHHHcCCeeecceeccCCcceEEEEEeC-CCEEEEEEecC
Confidence            468999999999999999999889987432    2 2334455554 67788888753

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=96.05  E-value=0.22  Score=38.48  Aligned_cols=49  Identities=24%  Similarity=0.266  Sum_probs=37.0

Q ss_pred             eEEEEEECCHHHHHHHHHhCCCeEEccCCCccEEEEeCCCCCeEEEEee
Q 032856           82 RHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        82 ~hi~~~v~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      ..+.|.+.|+.++.+.|.+..++.....-....+|..||=||.+.|...
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~~~~~~~~  173 (989)
T 3opy_A          125 GEVTFFTASIDKLKAKLIEIGAEIIPSKIDLVEFSTRDPMGDVISFSSY  173 (989)
T ss_dssp             CEEEEECSCHHHHHHHHHHSSCCBCCCC--CCCEEEESSSEEEEECCSS
T ss_pred             ceEEEEeCcHHHHHHHhhhcccccCCCCCCceeEEEecCCCCEEeeecC
Confidence            4699999999999999998844433333345679999999999987543

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=95.97  E-value=0.032  Score=33.10  Aligned_cols=55  Identities=16%  Similarity=0.104  Sum_probs=38.5

Q ss_pred             CCCCCceEEEEEECCHHHHHHHHHh-CCCeEEcc------------------CCCccEEEEeCCCCCeEEEEeeC
Q 032856           76 EHGGRDRHTCIAIRDVSKLKMILDK-AGISYTLS------------------KSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        76 ~~~~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~------------------~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      ....++.|+++.|+|++++.+.+.+ .|.+....                  ..+.+..++.. .+..+||++..
T Consensus        15 ~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-g~~~leL~~~~   88 (159)
T 3gm5_A           15 LDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFEL-GPLQLELIEPD   88 (159)
T ss_dssp             CCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEE-TTEEEEEEEEC
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEec-CCEEEEEEEEC
Confidence            3446789999999999999999987 89875321                  12234444443 56788888753

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=95.89  E-value=0.043  Score=30.92  Aligned_cols=52  Identities=15%  Similarity=0.158  Sum_probs=39.5

Q ss_pred             CceEEEEEECCHHHHHHHHHh-CCCeEEcc----CCCccEEEEeCCCCCeEEEEeeC
Q 032856           80 RDRHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      .+.|+++.|.|++++.+.+++ .|.+....    ..+...+++.-++|..++|.+.+
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~   59 (127)
T 3e5d_A            3 KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRT   59 (127)
T ss_dssp             CCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEET
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecC
Confidence            468999999999999999965 79887543    22345566776678899998764

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=95.86  E-value=0.062  Score=31.30  Aligned_cols=53  Identities=13%  Similarity=0.091  Sum_probs=38.3

Q ss_pred             CCCceEEEEEECCHHHHHHHHHh-CCCeEEccCCCccEEEE-eCCCCCeEEEEee
Q 032856           78 GGRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFT-RDPDANALEFTQV  130 (132)
Q Consensus        78 ~~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~-~Dp~G~~iel~~~  130 (132)
                      -.++.|+++.|.|++++.+.+++ .|.+...........++ .+..+..++|.+.
T Consensus        26 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   80 (141)
T 3ghj_A           26 IKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSARRWNFLWVSGRAGMVVLQEE   80 (141)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred             eceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCCCcEEEEEecCCCcEEEEecc
Confidence            46689999999999999999976 89987664333333444 3445677887764

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=95.73  E-value=0.049  Score=30.83  Aligned_cols=51  Identities=22%  Similarity=0.349  Sum_probs=37.2

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEEcc---C-CCccEEEEeCCCCCeEEEEee
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS---K-SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~---~-~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      .++.|+++.|.|++++.+.+++ .|++....   + .+....++.. ++..++|.+.
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~   59 (134)
T 3rmu_A            4 GRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNL-GNTKMELLHP   59 (134)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEEC-SSSEEEEEEE
T ss_pred             ceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEec-CCEEEEEEec
Confidence            3578999999999999999998 89987542   1 2334444444 6678888764

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=95.72  E-value=0.041  Score=31.91  Aligned_cols=52  Identities=12%  Similarity=0.040  Sum_probs=39.7

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEEccC----CCccEEEEeCCCC-----CeEEEEee
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK----SGRPAIFTRDPDA-----NALEFTQV  130 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~----~~~~~~~~~Dp~G-----~~iel~~~  130 (132)
                      .++.|+++.|.|++++.+.+++ .|++.....    .+....++..+++     ..++|.+.
T Consensus         8 ~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~   69 (148)
T 1jc4_A            8 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAP   69 (148)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEE
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeec
Confidence            4678999999999999999985 899875431    2345667777765     78888875

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=95.71  E-value=0.044  Score=36.21  Aligned_cols=36  Identities=14%  Similarity=0.189  Sum_probs=31.7

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCC
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARP   42 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~   42 (132)
                      ....++.+|.|.+.|.+++.+.|+++||.+.....+
T Consensus       186 nGa~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~~~  221 (274)
T 3p8a_A          186 QKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEEND  221 (274)
T ss_dssp             CTTEEEEEEEEEETTHHHHHHHHHHHHCCEEEEECS
T ss_pred             CccceEEEEEEEeCCHHHHHHHHHHHhCCCccccCC
Confidence            346799999999999999999999999999876543

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=95.69  E-value=0.055  Score=30.61  Aligned_cols=54  Identities=20%  Similarity=0.302  Sum_probs=35.0

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEE
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLM   63 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~   63 (132)
                      -.++.|+++.|.|++++.+...+ .|.++.........+...+++.- ++..++++
T Consensus        79 ~~g~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  133 (134)
T 3l7t_A           79 ACGLRHLAFYVEDVEASRQELIA-LGIRVEEVRYDDYTGKKMAFFFDPDGLPLELH  133 (134)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHH-HTCCCCCCEECTTSCCEEEEEECTTCCEEEEE
T ss_pred             CCCeEEEEEEECCHHHHHHHHHh-CCCcccceeccCCCceEEEEEECCCCCEEEEe
Confidence            34789999999999999999887 68877543222222334444443 34455554

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=95.57  E-value=0.05  Score=31.41  Aligned_cols=50  Identities=14%  Similarity=0.136  Sum_probs=35.9

Q ss_pred             CceEEEEEECCHHHHHHHHHhCCCeEEccCCCccEEEEeCCCCCeEEEEe
Q 032856           80 RDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~Dp~G~~iel~~  129 (132)
                      ++.|+.+.|.|++++.+.+++.|+++...........+.-++|..+.|.+
T Consensus         4 ~l~hv~l~v~D~~~a~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~   53 (138)
T 2a4x_A            4 RISLFAVVVEDMAKSLEFYRKLGVEIPAEADSAPHTEAVLDGGIRLAWDT   53 (138)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTTCCCCGGGGGCSEEEEECTTSCEEEEEE
T ss_pred             eeeEEEEEECCHHHHHHHHHHcCCcEEecCCCCceEEEEcCCCeEEEEec
Confidence            47899999999999999998899887543322223444445677777765

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=95.27  E-value=0.087  Score=30.66  Aligned_cols=56  Identities=16%  Similarity=0.146  Sum_probs=37.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEecC
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELP   66 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~   66 (132)
                      .++.|++|.|.|++++.+-..+ .|.++.........+...+++.- ++..+++++..
T Consensus        94 ~g~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           94 LGYLRVMFTVEDIDEMVSRLTK-HGAELVGEVVQYENSYRLCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             BEEEEEEEEESCHHHHHHHHHH-TTCEESSCCEEETTTEEEEEEECGGGCEEEEEEEC
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-CCCeecCCCcccCCceEEEEEECCCCCEEEEEecc
Confidence            4678999999999999999888 68887654221112334444444 44567776543

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=95.25  E-value=0.049  Score=31.25  Aligned_cols=51  Identities=8%  Similarity=0.016  Sum_probs=34.8

Q ss_pred             CCceEEEEEECCHHHHHHHHHhCCCeEEcc-CCCccEEEEeCCCCCeEEEEe
Q 032856           79 GRDRHTCIAIRDVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~-~~~~~~~~~~Dp~G~~iel~~  129 (132)
                      ..+.|+++.|.|+++..+..++.|+++... ...+...++.-.+|..++|..
T Consensus         5 ~~i~hv~l~v~D~~~a~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~   56 (128)
T 3g12_A            5 LLITSITINTSHLQGMLGFYRIIGFQFTASKVDKGSEVHRAVHNGVEFSLYS   56 (128)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHHTCCCEEC-----CCEEEEEETTEEEEEEE
T ss_pred             ceEEEEEEEcCCHHHHHHHHHHCCCEEecccCCCCCEEEEEeCCCeEEEEEE
Confidence            357899999999999999988899887654 222234455433566666644

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=94.96  E-value=0.091  Score=30.16  Aligned_cols=50  Identities=8%  Similarity=-0.039  Sum_probs=35.7

Q ss_pred             CceEEEEEECCHHHHHHHHHh-CCCeEEccCC-C--ccEEEEeCCCCCeEEEEee
Q 032856           80 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKS-G--RPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~-~--~~~~~~~Dp~G~~iel~~~  130 (132)
                      ++.|+++.|.|++++.+.+.+ .|++...... .  .....+.. ++..++|.+.
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~   58 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-GGLSIVLREH   58 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-TSCEEEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-CCCEEEEEeC
Confidence            478999999999999999976 7998754321 1  22333334 6788888775

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=94.72  E-value=0.11  Score=29.06  Aligned_cols=53  Identities=17%  Similarity=0.322  Sum_probs=33.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEE
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLM   63 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~   63 (132)
                      .++.|+++.|.|++++.+...+ .|.++.........+...+++.- ++..++++
T Consensus        72 ~g~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  125 (126)
T 2p25_A           72 LGLRHLAFKVEHIEEVIAFLNE-QGIETEPLRVDDFTGKKMTFFFDPDGLPLELH  125 (126)
T ss_dssp             SSCCCEEEECSCHHHHHHHHHH-TTCCCCCCEECTTTCCEEEEEECTTCCEEEEE
T ss_pred             ccceEEEEEeCCHHHHHHHHHH-cCCccccccccCCCCcEEEEEECCCCCEEEee
Confidence            4678999999999999998887 68776543221122223444443 34455543

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=94.65  E-value=0.17  Score=30.71  Aligned_cols=55  Identities=15%  Similarity=0.244  Sum_probs=38.3

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEecC
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELP   66 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~   66 (132)
                      .++.|+.|.|.|++++.+-.++ .|.++......... ...+++.- ++..++|++..
T Consensus       126 ~g~~hl~f~v~dv~~~~~~l~~-~G~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~  181 (187)
T 3vw9_A          126 RGFGHIGIAVPDVYSACKRFEE-LGVKFVKKPDDGKM-KGLAFIQDPDGYWIEILNPN  181 (187)
T ss_dssp             CBEEEEEEECSCHHHHHHHHHH-TTCCEEECTTSSSS-TTCEEEECTTCCEEEEECGG
T ss_pred             CceeEEEEEECCHHHHHHHHHH-CCCeEeeCCccCCc-ceEEEEECCCCCEEEEEEcc
Confidence            3788999999999999999987 69988764332221 12344544 56688887654

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=94.50  E-value=0.18  Score=29.45  Aligned_cols=48  Identities=19%  Similarity=0.178  Sum_probs=33.8

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEEccCCCccEEEEeCCCCCeEEEEe
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~Dp~G~~iel~~  129 (132)
                      .++.|+++.|.|++++.+.+++ .|.++.....+  ..++.- +|..++|.+
T Consensus        22 ~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~~--~~~l~~-~~~~l~l~~   70 (152)
T 3huh_A           22 DRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQN--RKALIF-GAQKINLHQ   70 (152)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEETTT--EEEEEE-TTEEEEEEE
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhcCCCEEEEccCC--eEEEEe-CCeEEEEec
Confidence            4678999999999999999998 89988665332  222222 345566554

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=94.40  E-value=0.34  Score=27.26  Aligned_cols=54  Identities=9%  Similarity=0.234  Sum_probs=35.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEe
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME   64 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~   64 (132)
                      .+..|+.|.|.|++++.+-..+ .|.++.........+...+++.- ++..+++++
T Consensus        78 ~~~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           78 GGYTGISLITRDIDEAYKTLTE-RGVTFTKPPEMMPWGQRATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHH-TTCEESSSCEECTTSCEEEEEECTTCEEEEEEE
T ss_pred             CCeEEEEEEeCCHHHHHHHHHH-CCCEeecCCCcCCCCCEEEEEECCCCCEEEEEe
Confidence            5678999999999999999987 69888653221222223444444 344555543

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=94.30  E-value=0.2  Score=28.22  Aligned_cols=48  Identities=15%  Similarity=0.210  Sum_probs=33.6

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEEccCCCccEEEEeCCCCCeEEEEe
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~Dp~G~~iel~~  129 (132)
                      .++.|+++.|+|++++.+.+++ .|.+......+  ..++.- +|..++|.+
T Consensus         9 ~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~~--~~~~~~-~~~~~~l~~   57 (133)
T 3ey7_A            9 SHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGAG--RIALEF-GHQKINLHQ   57 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEEEEETTT--EEEEEE-TTEEEEEEE
T ss_pred             cccCEEEEEECCHHHHHHHHHHccCceEEEecCC--eEEEEc-CCEEEEEEc
Confidence            5688999999999999999998 89987654322  222222 345555554

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=94.13  E-value=0.31  Score=27.54  Aligned_cols=56  Identities=14%  Similarity=0.080  Sum_probs=36.2

Q ss_pred             eeeeEEEEeCCHHHHHHHHHhhcCCeeeccCC-CCCCCceeEEEEe-CCeEEEEEecCC
Q 032856           11 SVHHVGILCENLERSLEFYQNILGLEINEARP-HDKLPYRGAWLWV-GAEMIHLMELPN   67 (132)
Q Consensus        11 ~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~-~~~~~~~~~~~~~-~~~~~~l~~~~~   67 (132)
                      ++.|+++.|.|++++.+...+ .|.++..... .+......+++.- ++..++++....
T Consensus        71 ~~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  128 (135)
T 1f9z_A           71 AYGHIALSVDNAAEACEKIRQ-NGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  128 (135)
T ss_dssp             SEEEEEEECSCHHHHHHHHHH-TTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC--
T ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCC
Confidence            678999999999999999887 6888765321 1111113344444 566788877544

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=93.99  E-value=0.33  Score=29.41  Aligned_cols=54  Identities=15%  Similarity=0.222  Sum_probs=36.9

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEec
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMEL   65 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~   65 (132)
                      .++.|++|.|.|++++.+..++ .|.++........ ....+++.- ++..++++..
T Consensus       123 ~g~~hi~f~v~dvd~~~~~l~~-~G~~~~~~p~~~~-~~~~~~~~DPdG~~iel~~~  177 (184)
T 2za0_A          123 RGFGHIGIAVPDVYSACKRFEE-LGVKFVKKPDDGK-MKGLAFIQDPDGYWIEILNP  177 (184)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHH-TTCCEEECTTSSS-STTCEEEECTTCCEEEEECT
T ss_pred             CCeeEEEEEeCCHHHHHHHHHH-CCCeeecCCcCCC-ceeEEEEECCCCCEEEEEec
Confidence            4678999999999999999987 6988765432111 123345544 5567777654

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=93.82  E-value=0.35  Score=27.51  Aligned_cols=49  Identities=2%  Similarity=-0.114  Sum_probs=34.9

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEEccCCCccEEEEeCCCCCeEEEEe
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~Dp~G~~iel~~  129 (132)
                      .++.|+.+.|.|+++..+.+++ .|.+.....+  ....+...+|..+.|.+
T Consensus        12 ~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~l~l~~   61 (132)
T 3sk2_A           12 ITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP--RYVAFPSSGDALFAIWS   61 (132)
T ss_dssp             CCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS--SEEEEECSTTCEEEEES
T ss_pred             ceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC--CEEEEEcCCCcEEEEEe
Confidence            5689999999999999999887 7887643322  23345545566777654

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=93.71  E-value=0.14  Score=30.25  Aligned_cols=55  Identities=15%  Similarity=0.180  Sum_probs=36.2

Q ss_pred             eeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEecCC
Q 032856           11 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPN   67 (132)
Q Consensus        11 ~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~   67 (132)
                      ++.|+.+.|.|++++.+-.++ .|.++..+......+ +.+++.- ++..++|++...
T Consensus        98 g~~~l~f~VdDvda~~~~l~~-~Gv~~~~~p~~~~~g-~~~~f~DPdGn~iel~q~~~  153 (155)
T 4g6x_A           98 GIPAASFAVDDIAAEYERLSA-LGVRFTQEPTDMGPV-VTAILDDTCGNLIQLMQIAY  153 (155)
T ss_dssp             TCCSEEEEESCHHHHHHHHHH-TTCCEEEEEEECSSC-EEEEEECSSSCEEEEEEC--
T ss_pred             CceEEEeeechhhhhhhHHhc-CCcEEeeCCEEcCCe-EEEEEECCCCCEEEEEEECC
Confidence            467999999999999999887 688765432222222 4455544 556888877543

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=93.67  E-value=0.37  Score=28.11  Aligned_cols=49  Identities=18%  Similarity=0.152  Sum_probs=35.3

Q ss_pred             CCceEEEEEECCHHHHHHHH----HhCCCeEEccCCCccEEEEeCCCCCeEEEEee
Q 032856           79 GRDRHTCIAIRDVSKLKMIL----DKAGISYTLSKSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l----~~~g~~~~~~~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      .++.|+++.|.|++++.+.+    +..|++......... .|+.  +|..++|.+.
T Consensus        19 ~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~~~-~~~~--g~~~l~l~~~   71 (146)
T 3ct8_A           19 GMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSRGK-SYKH--GKTYLVFVQT   71 (146)
T ss_dssp             TSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETTEE-EEEE--TTEEEEEEEC
T ss_pred             cceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCCCc-eEec--CCeEEEEEEc
Confidence            56899999999999999888    458998765432222 3444  5667777764

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=93.64  E-value=0.41  Score=27.91  Aligned_cols=49  Identities=14%  Similarity=0.090  Sum_probs=35.7

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEEccCCCccEEEEeCCCCCeEEEEee
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      .++.|+.+.|.|++++.+.+++ .|+++....  ....++.. +|..++|.+.
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~--~~~~~~~~-~~~~l~l~~~   53 (150)
T 3bqx_A            4 QQVAVITLGIGDLEASARFYGEGFGWAPVFRN--PEIIFYQM-NGFVLATWLV   53 (150)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC--SSEEEEEC-SSSEEEEEEH
T ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEeecCC--CCEEEEEc-CCEEEEEEec
Confidence            3578999999999999999987 898765433  23444544 5777777753

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=93.54  E-value=0.45  Score=27.46  Aligned_cols=52  Identities=19%  Similarity=0.192  Sum_probs=37.5

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEEcc---CC-CccEEEEeCCC---CCeEEEEee
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS---KS-GRPAIFTRDPD---ANALEFTQV  130 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~---~~-~~~~~~~~Dp~---G~~iel~~~  130 (132)
                      .++.|+.+.|.|++++.+.+++ .|++....   +. +....++.-++   +..++|.+.
T Consensus         7 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~   66 (144)
T 2c21_A            7 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN   66 (144)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEE
T ss_pred             ceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEec
Confidence            4578999999999999999986 89987542   21 22335665554   578888765

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=93.49  E-value=0.42  Score=27.81  Aligned_cols=30  Identities=13%  Similarity=0.283  Sum_probs=25.4

Q ss_pred             CCceEEEEEECCHHHHHHHHHhCCCeEEcc
Q 032856           79 GRDRHTCIAIRDVSKLKMILDKAGISYTLS  108 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~  108 (132)
                      ..+.||++.|.|++...+..++.|......
T Consensus         8 ~rl~~V~L~V~Dl~~s~~FY~~lg~~~~~~   37 (149)
T 4gym_A            8 SRLTFVNLPVADVAASQAFFGTLGFEFNPK   37 (149)
T ss_dssp             CCCEEEEEEESCHHHHHHHHHHTTCEECGG
T ss_pred             ccEEEEEEEeCCHHHHHHHHHHhCCCccee
Confidence            568899999999999999999988766543

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=93.37  E-value=0.3  Score=28.68  Aligned_cols=49  Identities=6%  Similarity=-0.073  Sum_probs=34.9

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEEccCCCccEEEEeCCCCCeEEEEe
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~Dp~G~~iel~~  129 (132)
                      .++.|+.+.|.|++++.+.+++ .|.++....+  ...++.-++|..+.|..
T Consensus         5 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~~~~~~~~~g~~l~l~~   54 (148)
T 3rhe_A            5 SDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP--TFAMFVMKTGLRLGLWA   54 (148)
T ss_dssp             --CEEEEEEESCHHHHHHHHHHHHTCCCSEECS--SEEEEECTTSCEEEEEE
T ss_pred             ccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC--CEEEEEcCCCcEEEEec
Confidence            3578999999999999999887 8987654332  24455555677777754

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=93.18  E-value=0.48  Score=26.53  Aligned_cols=53  Identities=11%  Similarity=0.079  Sum_probs=36.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEec
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMEL   65 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~   65 (132)
                      .+..|+++.|.|++++.+...+ .|.++.....  ..+...+++.- ++..+++++.
T Consensus        71 ~~~~~~~f~v~d~~~~~~~l~~-~G~~~~~~~~--~~g~~~~~~~DPdG~~iel~~~  124 (126)
T 2qqz_A           71 AKRAHPAFYVLKIDEFKQELIK-QGIEVIDDHA--RPDVIRFYVSDPFGNRIEFMEN  124 (126)
T ss_dssp             CSSSCEEEEETTHHHHHHHHHH-TTCCCEEECS--STTEEEEEEECTTSCEEEEEEE
T ss_pred             CCceEEEEEcCCHHHHHHHHHH-cCCCccCCCC--CCCeeEEEEECCCCCEEEEEeC
Confidence            4678999999999999999887 6887765432  22334444444 4556776653

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=93.17  E-value=0.37  Score=28.02  Aligned_cols=31  Identities=19%  Similarity=0.337  Sum_probs=26.7

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEEccC
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK  109 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~  109 (132)
                      .++.|+++.|.|++++.+.+++ .|.++....
T Consensus        26 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~   57 (147)
T 3zw5_A           26 RRLDHIVMTVKSIKDTTMFYSKILGMEVMTFK   57 (147)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHHHCCEEEEET
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhcCCEEEecC
Confidence            5678999999999999999998 899876543

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=93.15  E-value=0.32  Score=28.31  Aligned_cols=49  Identities=8%  Similarity=-0.014  Sum_probs=34.6

Q ss_pred             CceEEEEEECCHHHHHHHHHh-CCCeEEccCCCccEEEEeCCCCCeEEEEee
Q 032856           80 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      ++.|+.+.|.|++++.+.+++ .|+++.....+  ..++.-.+|..++|.+.
T Consensus        25 ~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~l~l~~~   74 (144)
T 2kjz_A           25 HPDFTILYVDNPPASTQFYKALLGVDPVESSPT--FSLFVLANGMKLGLWSR   74 (144)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHTCCCSEEETT--EEEEECTTSCEEEEEET
T ss_pred             ceeEEEEEeCCHHHHHHHHHHccCCEeccCCCC--eEEEEcCCCcEEEEEeC
Confidence            678999999999999999987 79876433222  34444444677777653

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=92.44  E-value=0.36  Score=28.59  Aligned_cols=57  Identities=7%  Similarity=0.075  Sum_probs=37.0

Q ss_pred             eeeeeeEEEEe---CCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEecCC
Q 032856            9 VVSVHHVGILC---ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPN   67 (132)
Q Consensus         9 ~~~~~hv~i~v---~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~   67 (132)
                      -.++.|+++.|   .|++++.+-..+ .|.++........ +...+++.- ++..++++....
T Consensus        74 ~~g~~hi~f~V~~~~dld~~~~~l~~-~G~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  134 (160)
T 3r4q_A           74 AVGQGHFCFYADDKAEVDEWKTRFEA-LEIPVEHYHRWPN-GSYSVYIRDPAGNSVEVGEGKL  134 (160)
T ss_dssp             EEEECEEEEEESSHHHHHHHHHHHHT-TTCCCCEEEECTT-SCEEEEEECTTCCEEEEEEGGG
T ss_pred             CcceeEEEEEeCCHHHHHHHHHHHHH-CCCEEeccccccC-CcEEEEEECCCCCEEEEEeCCC
Confidence            45789999999   778777777766 5877654322112 234455544 566888887553

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=92.22  E-value=0.31  Score=28.53  Aligned_cols=57  Identities=16%  Similarity=0.191  Sum_probs=37.7

Q ss_pred             eeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEecCCCC
Q 032856           11 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPD   69 (132)
Q Consensus        11 ~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~   69 (132)
                      +..|+.+.|.|++++.+-..+ .|.++.........+ +.+++.- ++..++|++....+
T Consensus        65 ~~~hl~f~V~d~d~~~~~l~~-~G~~v~~~p~~~~~G-~~~~~~DPdG~~iel~~~~~~~  122 (144)
T 3r6a_A           65 RNTQATFLVDSLDKFKTFLEE-NGAEIIRGPSKVPTG-RNMTVRHSDGSVIEYVEHSKIE  122 (144)
T ss_dssp             GGCCEEEEESCHHHHHHHHHH-TTCEEEEEEEEETTE-EEEEEECTTSCEEEEEEECC--
T ss_pred             cceEEEEEeCCHHHHHHHHHH-cCCEEecCCccCCCc-eEEEEECCCCCEEEEEEcCCcc
Confidence            458999999999999999887 698875432211122 3344444 56688888876553

>1k4n_A Protein EC4020, protein YECM; structural genomics, A NEW fold of protein, PSI, protein structure initiative; 1.60A {Escherichia coli} SCOP: d.32.1.5

Probab=91.92  E-value=1.4  Score=27.39  Aligned_cols=76  Identities=14%  Similarity=0.109  Sum_probs=48.3

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEE------EEeCCeEEEEEecCCCCCCCCCCCCCCCceE
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAW------LWVGAEMIHLMELPNPDPLSGRPEHGGRDRH   83 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~h   83 (132)
                      -.++||.++|++.+.|.+|-+.++..-..-... .-.+-..+.      +..++..+.+++.+-+..  +.+.+ .|.-|
T Consensus        42 ~~~DHIalRvn~~~~Ae~~~~~l~~~G~llSen-~INGRPI~l~~L~qPL~~~~~~I~cvELP~P~~--K~Yp~-eGWEH  117 (192)
T 1k4n_A           42 LTADHISLRCHQNATAERWRRGFEQCGELLSEN-MINGRPICLFKLHEPVQVAHWQFSIVELPWPGE--KRYPH-EGWEH  117 (192)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHTTTEEEEEEE-EETTEEEEEEEEEEEEEETTEEEEEEEEECCCS--SCCSS-CEEEE
T ss_pred             ccCcEEEEecCCHHHHHHHHHHHHHhchhhhcc-ccCCeeEEEEEcCCCceeCCeEEEEEEcCCCCC--CCCCC-CCceE
Confidence            468999999999999999999988754322111 001111222      344666777777665542  22222 67899


Q ss_pred             EEEEEC
Q 032856           84 TCIAIR   89 (132)
Q Consensus        84 i~~~v~   89 (132)
                      |.+.++
T Consensus       118 IE~Vlp  123 (192)
T 1k4n_A          118 IEIVLP  123 (192)
T ss_dssp             EEEECC
T ss_pred             EEEEec
Confidence            999998

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=91.83  E-value=0.52  Score=26.03  Aligned_cols=53  Identities=15%  Similarity=0.196  Sum_probs=33.0

Q ss_pred             eeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEe
Q 032856           11 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME   64 (132)
Q Consensus        11 ~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~   64 (132)
                      ...|+.+.|.|++++.+...+ .|.++.........+...+++.- ++..+++++
T Consensus        64 ~~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~  117 (119)
T 2pjs_A           64 DVPDLSIEVDNFDEVHARILK-AGLPIEYGPVTEAWGVQRLFLRDPFGKLINILS  117 (119)
T ss_dssp             CCCSEEEEESCHHHHHHHHHH-TTCCCSEEEEECTTSCEEEEEECTTSCEEEEEE
T ss_pred             ceeEEEEEECCHHHHHHHHHH-CCCccccCCccCCCccEEEEEECCCCCEEEEEe
Confidence            467999999999999999887 68766543211111223444444 445666654

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=91.57  E-value=1  Score=25.54  Aligned_cols=47  Identities=11%  Similarity=0.082  Sum_probs=32.5

Q ss_pred             CceEEEEEECCHHHHHHHHHh-CCCeEEccCCCccEEEEeCCCCCeEEEEe
Q 032856           80 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~Dp~G~~iel~~  129 (132)
                      ++.|+.+.|.|++++.+.+++ .|++.......  ..++.. +|..++|.+
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~--~~~~~~-~~~~l~l~~   51 (135)
T 1nki_A            4 GLNHLTLAVADLPASIAFYRDLLGFRLEARWDQ--GAYLEL-GSLWLCLSR   51 (135)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT--EEEEEE-TTEEEEEEE
T ss_pred             eEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCCC--ceEEec-CCEEEEEEe
Confidence            478999999999999999987 89987643221  233432 344556554

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=91.39  E-value=1  Score=25.78  Aligned_cols=49  Identities=10%  Similarity=0.071  Sum_probs=34.1

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEEccCCCccEEEEeCCCCCeEEEEee
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      .++.|+++.|.|++++.+.+++ .|.+.......  ..++.. +|..++|.+.
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~-~~~~l~l~~~   52 (141)
T 1npb_A            3 QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT--GAYLTC-GDLWVCLSYD   52 (141)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHTTSCCEEEEEETT--EEEEEE-TTEEEEEEEC
T ss_pred             ceEEEEEEEeCCHHHHHHHHHhccCCEEEeecCC--cEEEEE-CCEEEEEEEC
Confidence            3578999999999999999987 89987653222  234433 4555666543

>3iuz_A Putative glyoxalase superfamily protein; struct genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: MLY P6G PGE; 1.90A {Ralstonia eutropha}

Probab=91.08  E-value=1.1  Score=30.54  Aligned_cols=46  Identities=17%  Similarity=-0.004  Sum_probs=35.8

Q ss_pred             CCCceEEEEEECCHHHHHHHHHhCCCeEEc----cCC----------CccEEEEeCCCCC
Q 032856           78 GGRDRHTCIAIRDVSKLKMILDKAGISYTL----SKS----------GRPAIFTRDPDAN  123 (132)
Q Consensus        78 ~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~----~~~----------~~~~~~~~Dp~G~  123 (132)
                      +..++|++..|.|++++.++++++|+++..    +|.          ....+.|.|.+|.
T Consensus       233 G~~iNHlT~rv~DId~v~~~m~~~G~~~k~~IeGsP~~lLrQTSf~A~~e~v~F~d~~G~  292 (340)
T 3iuz_A          233 GNAFNHATDRVDDVFGLSEQQXALGRPMXDXVEVSGSGRVXQTAFRADTVRRQFIGAQGE  292 (340)
T ss_dssp             TTSCSEEEEECSCHHHHHHHHHHTTCCBCSCCEECTTSSEEEEEBCCCEEEEEEECTTSC
T ss_pred             CCccccccCCcCCHHHHHHHHHHcCCChhhhhcCCcccceeeeeccccceEEEEecCCCc
Confidence            457899999999999999999999998742    222          2456778887774

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=90.93  E-value=0.8  Score=26.17  Aligned_cols=30  Identities=23%  Similarity=0.422  Sum_probs=24.6

Q ss_pred             eeeeeEEEEeC--CHHHHHHHHHhhcCCeeecc
Q 032856           10 VSVHHVGILCE--NLERSLEFYQNILGLEINEA   40 (132)
Q Consensus        10 ~~~~hv~i~v~--d~~~~~~fy~~~lg~~~~~~   40 (132)
                      .+..|+.+.|.  |++++.+...+ .|.+....
T Consensus        65 ~~~~h~~~~v~~~d~~~~~~~l~~-~G~~~~~~   96 (139)
T 1r9c_A           65 RSYNHIAFKIDDADFDRYAERVGK-LGLDMRPP   96 (139)
T ss_dssp             CCSCEEEEECCGGGHHHHHHHHHH-HTCCBCCC
T ss_pred             CCeeEEEEEcCHHHHHHHHHHHHH-CCCcccCC
Confidence            46789999999  99999998887 68876653

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=90.66  E-value=0.98  Score=25.84  Aligned_cols=28  Identities=14%  Similarity=0.106  Sum_probs=24.9

Q ss_pred             CceEEEEEECCHHHHHHHHHh-CCCeEEc
Q 032856           80 RDRHTCIAIRDVSKLKMILDK-AGISYTL  107 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~  107 (132)
                      .+.|+.+.|.|++++.+.+++ .|.+...
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~   36 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIE   36 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECG
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeec
Confidence            578999999999999999987 8998754

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=89.48  E-value=0.53  Score=26.91  Aligned_cols=55  Identities=7%  Similarity=-0.036  Sum_probs=34.3

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEecC
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELP   66 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~   66 (132)
                      .+..|+.+.|.|++++.+-..+  |.++.........+...+++.- ++..+++....
T Consensus        73 ~~~~~~~~~v~dv~~~~~~l~~--G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  128 (141)
T 2qnt_A           73 RRNMLLYFEHADVDAAFQDIAP--HVELIHPLERQAWGQRVFRFYDPDGHAIEVGESL  128 (141)
T ss_dssp             CSSCEEEEEESCHHHHHC-CGG--GSCEEEEEEECTTSCEEEEEECTTCCEEEEEECC
T ss_pred             CCceEEEEEeCcHHHHHHHHHc--CCccccCCccCCCCCEEEEEECCCCCEEEEEecc
Confidence            4678999999999999888877  8775432211112224444444 45577776643

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=89.22  E-value=1.3  Score=24.33  Aligned_cols=51  Identities=8%  Similarity=0.132  Sum_probs=31.1

Q ss_pred             eeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEe
Q 032856           13 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME   64 (132)
Q Consensus        13 ~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~   64 (132)
                      .|+.+.|.|++++.+-..+ .|.++.........+...+++.- ++..+++++
T Consensus        65 ~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~  116 (118)
T 2i7r_A           65 IIIHIEVEDVDQNYKRLNE-LGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYR  116 (118)
T ss_dssp             EEEEEECSCHHHHHHHHHH-HTCCEEEEEEECTTSCEEEEEECGGGCEEEEEE
T ss_pred             EEEEEEECCHHHHHHHHHH-CCCceecCCccccCccEEEEEECCCccEEEEEe
Confidence            3799999999999999887 68776432211112223344433 444666654

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=88.95  E-value=1.9  Score=24.06  Aligned_cols=26  Identities=12%  Similarity=0.202  Sum_probs=22.3

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCe
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLE   36 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~   36 (132)
                      .+..|+.+.|.|++++.+...+ .|.+
T Consensus        57 ~~~~~~~~~v~dv~~~~~~l~~-~G~~   82 (126)
T 1ecs_A           57 ASWFSCCLRLDDLAEFYRQCKS-VGIQ   82 (126)
T ss_dssp             GCCCEEEEEESCHHHHHHHHHH-TTCC
T ss_pred             CcceEEEEEECCHHHHHHHHHH-CCCc
Confidence            4568999999999999999887 5877

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=88.47  E-value=2.1  Score=23.95  Aligned_cols=56  Identities=16%  Similarity=0.290  Sum_probs=36.4

Q ss_pred             eeeeeEEEEeC--CHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEecC
Q 032856           10 VSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELP   66 (132)
Q Consensus        10 ~~~~hv~i~v~--d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~   66 (132)
                      .+..|+++.|.  |++++.+-..+ .|.++.............+++.- ++..+++....
T Consensus        65 ~~~~h~~~~v~~~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  123 (133)
T 2p7o_A           65 RTYNHIAFQIQSEEVDEYTERIKA-LGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGT  123 (133)
T ss_dssp             CCSCEEEEECCGGGHHHHHHHHHH-HTCCEECCCCCCTTCCCEEEEECSSSCEEEEECSS
T ss_pred             CCeeEEEEEcCHHHHHHHHHHHHH-CCCcccCCCccCCCCeeEEEEECCCCCEEEEEcCC
Confidence            46789999995  99999998877 68887654332212224444544 55677777643

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=88.44  E-value=2  Score=24.27  Aligned_cols=53  Identities=8%  Similarity=0.053  Sum_probs=33.9

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEecCC
Q 032856           14 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPN   67 (132)
Q Consensus        14 hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~   67 (132)
                      |+.+.|.|++++.+-..+ .|.++.........+...+++.- ++..+++++...
T Consensus        71 ~~~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  124 (137)
T 3itw_A           71 QVIVWVSDVDEHFMRSTA-AGADIVQPLQDKPWGLRQYLVRDLEGHLWEFTRHLR  124 (137)
T ss_dssp             EEEEEESCHHHHHHHHHH-TTCEEEEEEEEETTTEEEEEEECSSSCEEEEEECC-
T ss_pred             EEEEEeCCHHHHHHHHHH-cCCeeccCccccCCCcEEEEEECCCCCEEEEEEEcC
Confidence            999999999999988877 68876543221122223444444 456777776543

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=88.17  E-value=2.3  Score=23.93  Aligned_cols=29  Identities=17%  Similarity=0.121  Sum_probs=25.4

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEEc
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYTL  107 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~  107 (132)
                      ..+.|+++.|.|++++.+.+.+ .|.+...
T Consensus         8 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~   37 (135)
T 3rri_A            8 NDVFHLAIPARDLDEAYDFYVTKLGCKLAR   37 (135)
T ss_dssp             TSEEEEEEEESCHHHHHHHHTTTTCCEEEE
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEeec
Confidence            4689999999999999999976 8998754

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=87.35  E-value=1.4  Score=25.67  Aligned_cols=51  Identities=22%  Similarity=0.239  Sum_probs=33.4

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCCeeeccCC-CCCCCceeEEEEe-CCeEEEEEecC
Q 032856           14 HVGILCENLERSLEFYQNILGLEINEARP-HDKLPYRGAWLWV-GAEMIHLMELP   66 (132)
Q Consensus        14 hv~i~v~d~~~~~~fy~~~lg~~~~~~~~-~~~~~~~~~~~~~-~~~~~~l~~~~   66 (132)
                      |+.+.|.|++++.+-..+ .|.++..... .+..+ ..+++.- ++..+++++..
T Consensus        93 ~l~f~v~dld~~~~~l~~-~G~~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A           93 VVTVDVESIESALERIES-LGGKTVTGRTPVGNMG-FAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             EEEEECSCHHHHHHHHHH-TTCEEEEEEEEETTTE-EEEEEECTTSCEEEEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHH-cCCeEecCCeecCCCE-EEEEEECCCCCEEEEEecC
Confidence            899999999999999888 6888764321 11112 3444443 45577776643

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=85.95  E-value=2.1  Score=23.80  Aligned_cols=21  Identities=5%  Similarity=0.120  Sum_probs=18.2

Q ss_pred             eeeEEEEeCCHHHHHHHHHhh
Q 032856           12 VHHVGILCENLERSLEFYQNI   32 (132)
Q Consensus        12 ~~hv~i~v~d~~~~~~fy~~~   32 (132)
                      ..|+.+.|.|++++.+...+.
T Consensus        61 ~~~~~~~v~dv~~~~~~l~~~   81 (124)
T 1xrk_A           61 NTQAWVWVRGLDELYAEWSEV   81 (124)
T ss_dssp             GCEEEEEEECHHHHHHHHTTT
T ss_pred             ceEEEEEECCHHHHHHHHHHh
Confidence            469999999999999988774

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=85.69  E-value=3.3  Score=23.40  Aligned_cols=58  Identities=7%  Similarity=-0.047  Sum_probs=33.6

Q ss_pred             eeeEEEEeCCHHHHHHHHHh---hcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEecCCCC
Q 032856           12 VHHVGILCENLERSLEFYQN---ILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPD   69 (132)
Q Consensus        12 ~~hv~i~v~d~~~~~~fy~~---~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~   69 (132)
                      -.|+.|.|.|++++.+-..+   .+|.++.........+.+.+++.- ++..+++.+....+
T Consensus        67 ~~~l~~~v~dv~~~~~~l~~~g~~~g~~i~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~~~  128 (134)
T 3fcd_A           67 RVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNFTAPLAEG  128 (134)
T ss_dssp             -EEEEEECSCHHHHHHHHHHHHTTSCGGGEEEEEECTTSEEEEEEECTTSCEEEEEEECCTT
T ss_pred             eEEEEEEeCCHHHHHHHHHhcCCccCCccccCCcccCCCcEEEEEECCCCCEEEEEEccccc
Confidence            46999999999999888874   234332222111122323444444 55678887765543

>2g3a_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 1.90A {Agrobacterium tumefaciens str} SCOP: d.108.1.1

Probab=84.64  E-value=2.6  Score=24.01  Aligned_cols=30  Identities=17%  Similarity=0.086  Sum_probs=23.5

Q ss_pred             eeeeEEEEeCCHHHHHHHHHhhcCCeeeccCC
Q 032856           11 SVHHVGILCENLERSLEFYQNILGLEINEARP   42 (132)
Q Consensus        11 ~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~   42 (132)
                      ++..+.+.+.| ..+..||++ +||+......
T Consensus       108 g~~~i~l~~~n-~~a~~~y~k-~GF~~~~~~~  137 (152)
T 2g3a_A          108 GCMGAYIDTMN-PDALRTYER-YGFTKIGSLG  137 (152)
T ss_dssp             TCCEEEEEESC-HHHHHHHHH-HTCEEEEEEC
T ss_pred             CCCEEEEEecC-ccHHHHHHH-CCCEEeeecc
Confidence            45667778876 679999998 8999887654

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=84.26  E-value=3.6  Score=22.75  Aligned_cols=21  Identities=10%  Similarity=-0.067  Sum_probs=17.9

Q ss_pred             eeeEEEEeCCHHHHHHHHHhh
Q 032856           12 VHHVGILCENLERSLEFYQNI   32 (132)
Q Consensus        12 ~~hv~i~v~d~~~~~~fy~~~   32 (132)
                      ..|+.+.|.|++++.+-..+.
T Consensus        61 ~~~~~~~v~dvd~~~~~l~~~   81 (122)
T 1qto_A           61 NTSAWIEVTDPDALHEEWARA   81 (122)
T ss_dssp             TCEEEEEESCHHHHHHHHTTT
T ss_pred             ceEEEEEECCHHHHHHHHHhh
Confidence            369999999999998888774

>3lho_A Putative hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: PG4; 1.80A {Shewanella frigidimarina}

Probab=81.71  E-value=1.5  Score=28.86  Aligned_cols=95  Identities=15%  Similarity=0.155  Sum_probs=62.1

Q ss_pred             eeeeEEEEeC-----CHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCC-e--EEEEEecC--CC------------
Q 032856           11 SVHHVGILCE-----NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-E--MIHLMELP--NP------------   68 (132)
Q Consensus        11 ~~~hv~i~v~-----d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~--~~~l~~~~--~~------------   68 (132)
                      ..+|+++++-     .++.-.+.+.. ||+++....+.+..+....|+...+ .  ++-+.+..  .-            
T Consensus        38 ~nDHiA~RT~~~~~~gi~~la~~F~~-lGY~~~G~Y~f~~kkL~A~~f~hpd~~~prvFiSEL~ve~lS~~~q~~i~~~v  116 (267)
T 3lho_A           38 INDHIALRTFNIAKVNLSVLAKHFTS-IGYVDSGDYKFEQKKLIAKHFEHPDPKQPKVFISELLVEEFSPEVQKSIHGLI  116 (267)
T ss_dssp             CEEEEEEEEESCGGGCHHHHHHHHHT-TTCEEEEEEEETTTTEEEEEEECSSTTSCEEEEEEECGGGSCHHHHHHHHHHH
T ss_pred             ecceEEEEecCCCCccHHHHHHHHHH-cCCeEcceeccCCCccEEEEeCCCCCCCCeEEEeeccHhhCCHHHHHHHHHHH
Confidence            4689999873     57777888877 8999988777666666666665532 1  22111100  00            


Q ss_pred             ---C------------CCCCCC-------------------CCCCCceEEEEEE------CCHHHHHHHHHhCCCeEE
Q 032856           69 ---D------------PLSGRP-------------------EHGGRDRHTCIAI------RDVSKLKMILDKAGISYT  106 (132)
Q Consensus        69 ---~------------~~~~~~-------------------~~~~~~~hi~~~v------~d~~~~~~~l~~~g~~~~  106 (132)
                         .            .....+                   ..+..++|++..|      .|++++.+.|+++|+++.
T Consensus       117 ~~~~~~~l~a~~f~~~~~~W~p~~~~Y~~L~~ese~aAWv~~~G~~~NH~T~~v~~L~~~~dI~~v~~~l~~~G~~~n  194 (267)
T 3lho_A          117 DQVDIAATTADNFIYSGRHWDVDKATYQALLAESEYAAWVAALGYRANHFTVSINDLPEFERIEDVNQALKQAGFVLN  194 (267)
T ss_dssp             TTSCGGGGGSTTGGGCBCCSCCCHHHHHHHHHHCHHHHHHHHHCBSCSEEEEETTTCTTCCCHHHHHHHHHHTTCCBC
T ss_pred             hccChhhcchhhhhhcCCCCCCCHHHHHHHHHhChHHHHHhhcCCccceeehhhcccCCCCCHHHHHHHHHHcCCCcc
Confidence               0            000000                   1245678999999      899999999999999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	132
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	6e-14
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	7e-14
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	4e-12
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	1e-11
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	1e-10
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	3e-10
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	5e-10
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	5e-10
d1zswa2	170	d.32.1.10 (A:145-314) Hypothetical protein BC1024	7e-10
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	3e-09
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	6e-09
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	3e-08
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	4e-08
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	8e-08
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	1e-07
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	3e-07
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	4e-07
d1klla_	128	d.32.1.2 (A:) Mitomycin resistance protein D, MRD	5e-07
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	6e-07
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	2e-06
d1lgta1	131	d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygena	2e-06
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	3e-06
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	6e-06
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	3e-05
d1kw3b2	156	d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxyge	3e-05
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	6e-05
d1kw3b1	132	d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygena	6e-05
d1jifa_	122	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	8e-05
d1ecsa_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {K	1e-04
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	4e-04

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 62.3 bits (150), Expect = 6e-14
 Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 7/133 (5%)

Query: 7   YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV---GAEMIHLM 63
           Y +   HH+ ++ +N   +  FY+N+LGL   +   +   P      +    G+    L 
Sbjct: 2   YEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELS 61

Query: 64  ELPNPDPLSGRPEHGGRDR--HTCIAIRDVSKLKMILDKAGISYT--LSKSGRPAIFTRD 119
               P             R      +   +   K   +K  + ++   + + RPA+   D
Sbjct: 62  FFEIPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFED 121

Query: 120 PDANALEFTQVDG 132
            +   L     +G
Sbjct: 122 AEGLRLVLLVSNG 134

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 62.0 bits (149), Expect = 7e-14
 Identities = 26/118 (22%), Positives = 44/118 (37%)

Query: 12  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 71
           + H  I   +L+RS++FY   LG+++       +  Y   +L  G EM   +     +  
Sbjct: 4   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 63

Query: 72  SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ 129
               +H     H  I + DV +L   + K  +            F  DPD   +E   
Sbjct: 64  VTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIELLN 121

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 57.4 bits (137), Expect = 4e-12
 Identities = 22/122 (18%), Positives = 49/122 (40%), Gaps = 5/122 (4%)

Query: 13  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 72
            H  +   +L+RS++FY  +LG+++     + +  Y  A++  G E    +     +   
Sbjct: 4   LHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV 63

Query: 73  GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----AIFTRDPDANALEF 127
            + E G    H  +++ + ++    + + G + T              F  DPD   +E 
Sbjct: 64  DKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIEL 123

Query: 128 TQ 129
            +
Sbjct: 124 IE 125

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 55.7 bits (133), Expect = 1e-11
 Identities = 16/122 (13%), Positives = 34/122 (27%), Gaps = 11/122 (9%)

Query: 11  SVHHVGILCENLERSLEFYQNILGLEINEARPH-DKLPYRGAWLWVGAEMIHLMELPNPD 69
            + H+  +  +LER     + +       A         R  +  +G   + +M+     
Sbjct: 4   GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKLA 63

Query: 70  PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANAL 125
                           I   D  +    + K G+     +        +I+  D D +  
Sbjct: 64  E------RSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMF 117

Query: 126 EF 127
           E 
Sbjct: 118 EL 119

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 53.3 bits (127), Expect = 1e-10
 Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 11/118 (9%)

Query: 11  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 70
            ++H+ +   +L  S+ FY+++LG  +           +GA+L +G+  + L   P    
Sbjct: 4   GLNHLTLAVADLPASIAFYRDLLGFRLEAR------WDQGAYLELGSLWLCLSREPQYGG 57

Query: 71  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY-TLSKSGRPAIFTRDPDANALEF 127
               P          IA  D ++    L   G+     ++S   + +  DPD + LE 
Sbjct: 58  ----PAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEA 111

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.1 bits (126), Expect = 3e-10
 Identities = 21/144 (14%), Positives = 46/144 (31%), Gaps = 27/144 (18%)

Query: 13  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-------------- 58
               +  ++ ++SL+FY  +LG+ + +      + +   +L    +              
Sbjct: 25  QQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWA 84

Query: 59  -----MIHLMELPNPDPLSGRPEHGGRD-----RHTCIAIRDVSKLKMILDKAGISYT-- 106
                 + L      +    +  H G        H  IA+ DV       ++ G+ +   
Sbjct: 85  LSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKK 144

Query: 107 -LSKSGRPAIFTRDPDANALEFTQ 129
                 +   F +DPD   +E   
Sbjct: 145 PDDGKMKGLAFIQDPDGYWIEILN 168

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 52.2 bits (124), Expect = 5e-10
 Identities = 13/120 (10%), Positives = 32/120 (26%)

Query: 8   GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 67
             V   H  +  + L  + + +  +LG  + E    +       +L +  +   +  + +
Sbjct: 2   AAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHH 61

Query: 68  PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEF 127
           P+           +    +                       +    I+  DP  N  E 
Sbjct: 62  PEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEV 121

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 51.9 bits (123), Expect = 5e-10
 Identities = 24/118 (20%), Positives = 46/118 (38%), Gaps = 8/118 (6%)

Query: 11  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 70
           S++H+ +   +L++S+ F+  +LGL ++           G      +       +P    
Sbjct: 4   SLNHLTLAVSDLQKSVTFWHELLGLTLHARWNTGAYLTCGDLWVCLSYDEARQYVP---- 59

Query: 71  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEF 127
                E         +A  D   L   L++AG++     KS   + +  DPD + LE 
Sbjct: 60  ---PQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLEL 114

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 170

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 52.0 bits (124), Expect = 7e-10
 Identities = 13/130 (10%), Positives = 32/130 (24%), Gaps = 9/130 (6%)

Query: 3   VEGDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHL 62
           V   + +  +  V +    L++       I G          +      +  +  E    
Sbjct: 4   VPAKHQIQGMGSVELTVRRLDKMASTLTEIFGY-----TEVSRNDQEAIFQSIKGEAFGE 58

Query: 63  MELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS----GRPAIFTR 118
           + +   D  + +P  G           D              +  S         +++ R
Sbjct: 59  IVVKYLDGPTEKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFR 118

Query: 119 DPDANALEFT 128
           + +    E  
Sbjct: 119 ESNGILFEIA 128

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 50.3 bits (119), Expect = 3e-09
 Identities = 19/120 (15%), Positives = 37/120 (30%), Gaps = 2/120 (1%)

Query: 9   VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 68
           +V + H   +  ++ R   + +  LG  ++E           AW+     +         
Sbjct: 3   LVRLDHFNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGN 61

Query: 69  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR-PAIFTRDPDANALEF 127
            P          ++H  I I D      I D+               ++  DPD + +E 
Sbjct: 62  GPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEI 121

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 48.4 bits (114), Expect = 6e-09
 Identities = 12/116 (10%), Positives = 28/116 (24%), Gaps = 9/116 (7%)

Query: 17  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 76
           +   ++  ++EF+ + LG                A +      + +  + +         
Sbjct: 10  LTARDVAEAVEFWTDRLGFSRVFVEDDF------AGVVRDDVTLFISAVQDQVVPDNTQA 63

Query: 77  HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP---AIFTRDPDANALEFTQ 129
                    +       +      A          +P       RDP  N + F  
Sbjct: 64  WVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA 119

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 46.7 bits (109), Expect = 3e-08
 Identities = 15/118 (12%), Positives = 32/118 (27%), Gaps = 10/118 (8%)

Query: 12  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 71
           + H+ +   ++  + EF +   GL  +  R +     R    ++   M            
Sbjct: 4   IKHLNLTVADVVAAREFLEKYFGLTCSGTRGNAFAVMRDNDGFILTLMKGKEV------- 56

Query: 72  SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-AIFTRDPDANALEFT 128
             +            +   V K+   L + G      K       +   P    +E  
Sbjct: 57  --QYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEVM 112

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 46.3 bits (109), Expect = 4e-08
 Identities = 17/124 (13%), Positives = 43/124 (34%), Gaps = 15/124 (12%)

Query: 11  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 70
           +++ + I+  N+ +     ++IL  + + A           +      ++       P  
Sbjct: 2   NLNQLDIIVSNVPQVCADLEHILDKKADYANDG-----FAQFTIGSHCLMLSQNHLVP-- 54

Query: 71  LSGRPEHGGRDRHTCIAIRDV----SKLKMILDKAGISYTLSKSGRPAIFTRDPDANALE 126
                E+        I + DV     +L  +  K     T++  G  ++  + P    L+
Sbjct: 55  ----LENFQSGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLD 110

Query: 127 FTQV 130
           F ++
Sbjct: 111 FYRM 114

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 46.1 bits (108), Expect = 8e-08
 Identities = 19/138 (13%), Positives = 39/138 (28%), Gaps = 17/138 (12%)

Query: 9   VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE---------- 58
            + + HV   C + + + ++YQ   G        + +       +   A+          
Sbjct: 5   FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQV 64

Query: 59  MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT-----LSKSGRP 113
           M  L +         +        H    + D+  +   L + G+        L   G  
Sbjct: 65  MAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR 124

Query: 114 AIF--TRDPDANALEFTQ 129
             F   +      +E TQ
Sbjct: 125 INFMHPKSGKGVLIELTQ 142

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 45.3 bits (106), Expect = 1e-07
 Identities = 17/125 (13%), Positives = 30/125 (24%), Gaps = 9/125 (7%)

Query: 14  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 73
            +      L+  + FY+  L L+                +  G                 
Sbjct: 12  RIARPTGQLDEIIRFYEEGLCLKRIG---EFSQHNGYDGVMFGLPHADYHLEFTQYEGGS 68

Query: 74  RPEHGGRDRHTCIAIRDVSKLKMI---LDKAGISYTLSKS---GRPAIFTRDPDANALEF 127
                  D      + +  +L  I   L   G     S++       +   DPD   + F
Sbjct: 69  TAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVF 128

Query: 128 TQVDG 132
               G
Sbjct: 129 MNSKG 133

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 44.7 bits (104), Expect = 3e-07
 Identities = 15/140 (10%), Positives = 40/140 (28%), Gaps = 19/140 (13%)

Query: 9   VVSVHHVGILCENLERSLEFYQNILGLEINEARPH---------------DKLPYRGAWL 53
           ++ + +V I+ E+L+ ++ F++ I       A                  +         
Sbjct: 7   LLRMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG 66

Query: 54  WVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY----TLSK 109
               E+   +  P        P +          + D+ ++   L K G          +
Sbjct: 67  HSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYE 126

Query: 110 SGRPAIFTRDPDANALEFTQ 129
           +     + R  +   +   +
Sbjct: 127 NSYRLCYIRGVEGILIGLAE 146

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 4e-07
 Identities = 14/101 (13%), Positives = 30/101 (29%), Gaps = 5/101 (4%)

Query: 8   GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 67
             +  H V     N +++  FY N +G E    +  +          +    I  +    
Sbjct: 8   RFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSA 67

Query: 68  PDPLSG-----RPEHGGRDRHTCIAIRDVSKLKMILDKAGI 103
            +P +        +HG   +     + D   +     + G 
Sbjct: 68  LNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGA 108

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]} Length = 128

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

 Score = 43.6 bits (101), Expect = 5e-07
 Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 7/124 (5%)

Query: 12  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 71
           +    ++ E++ +S+EFY+  +G+EI                 +      +  + + DP 
Sbjct: 3   ISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPE 61

Query: 72  SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK------SGRPAIFTRDPDANAL 125
              P  G R           S  K   +     Y           G+     +DPD N +
Sbjct: 62  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVV 121

Query: 126 EFTQ 129
           +   
Sbjct: 122 DLFA 125

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 43.4 bits (101), Expect = 6e-07
 Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 14/125 (11%)

Query: 8   GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 67
           GV+   HV +   ++ ++LE Y  +LGL        D+      +L    E+     +  
Sbjct: 4   GVMRPGHVQLRVLDMSKALEHYVELLGLI-----EMDRDDQGRVYLKAWTEVDKFSLVLR 58

Query: 68  PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----AIFTRDPDA 122
                G    G +        +    L       G +     +G        +  + P  
Sbjct: 59  EADEPGMDFMGFKVVDEDALRQLERDLM----AYGCAVEQLPAGELNSCGRRVRFQAPSG 114

Query: 123 NALEF 127
           +  E 
Sbjct: 115 HHFEL 119

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 43.2 bits (101), Expect = 2e-06
 Identities = 14/111 (12%), Positives = 29/111 (26%), Gaps = 13/111 (11%)

Query: 6   DYGVVSVHHVGILCENLERSLEFYQNILGLEI-------NEARPHDKLPYRGAWLWVGAE 58
           DYG+    H+      L  +  ++    G          +       L            
Sbjct: 4   DYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENV 63

Query: 59  MIHLMELPNPDPLSGRPE------HGGRDRHTCIAIRDVSKLKMILDKAGI 103
           ++ L E  +      + +       G   +H  +A  DV +    +     
Sbjct: 64  LLPLNEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSA 114

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

 Score = 41.9 bits (97), Expect = 2e-06
 Identities = 18/126 (14%), Positives = 36/126 (28%), Gaps = 19/126 (15%)

Query: 9   VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 68
           + S+ ++G    ++     F    LGL       +      G    + +    +      
Sbjct: 2   IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDN------GDLFRIDSRAWRIAVQQGE 55

Query: 69  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-------AIFTRDPD 121
                     G   +       ++++   L +AGI+ T   +           I   DP 
Sbjct: 56  VD---DLAFAG---YEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPF 109

Query: 122 ANALEF 127
              LE 
Sbjct: 110 GLPLEI 115

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 41.6 bits (96), Expect = 3e-06
 Identities = 19/124 (15%), Positives = 39/124 (31%), Gaps = 15/124 (12%)

Query: 9   VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 68
           +V   ++ I+  +L +S EFY ++LGL + E   +               ++    +   
Sbjct: 14  IVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDENTIYLRSLEEFIHHNLVLRQGPIAAV 73

Query: 69  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----AIFTRDPDAN 123
                         +   +  +V   +    + G      K G       ++   DP   
Sbjct: 74  ----------AAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGF 123

Query: 124 ALEF 127
             EF
Sbjct: 124 PYEF 127

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 41.0 bits (95), Expect = 6e-06
 Identities = 13/105 (12%), Positives = 28/105 (26%), Gaps = 8/105 (7%)

Query: 7   YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELP 66
           + V  +  V     N +++  +Y    G+++      +      A   +       +   
Sbjct: 3   FPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTS 62

Query: 67  NPDPLSGRP--------EHGGRDRHTCIAIRDVSKLKMILDKAGI 103
              P +           EHG       I + D         + G 
Sbjct: 63  VIKPATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGA 107

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 39.4 bits (91), Expect = 3e-05
 Identities = 8/57 (14%), Positives = 20/57 (35%)

Query: 7  YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLM 63
          +  ++ HHV + C +   +   +   LG  +             A L + +  +  +
Sbjct: 9  FHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFL 65

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 156

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 39.0 bits (90), Expect = 3e-05
 Identities = 24/133 (18%), Positives = 41/133 (30%), Gaps = 14/133 (10%)

Query: 3   VEGDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHL 62
           V GD G+    H      +  +++ FY  +LG  +++       P            +H 
Sbjct: 5   VTGDQGI---GHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAH----FLHC 57

Query: 63  MELPNPDPLSGRPEHGGRDRHT--CIAIRDVSKLKMILDKAGI-SYTLSKSGRP---AIF 116
               +   L+  P              I DV      LD AG  +  L +       + +
Sbjct: 58  NGRHHTIALAAFPIPKRIHHFMLQANTIDDVGYAFDRLDAAGRITSLLGRHTNDQTLSFY 117

Query: 117 TRDPDAN-ALEFT 128
              P     +EF 
Sbjct: 118 ADTPSPMIEVEFG 130

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 37.7 bits (86), Expect = 6e-05
 Identities = 17/118 (14%), Positives = 29/118 (24%), Gaps = 16/118 (13%)

Query: 14  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 73
              I      R+  FY +ILG+                      E    +          
Sbjct: 5   VANIATPEPARAQAFYGDILGMP------VAMDHGWIVTHASPLEAHAQVSFAREGG--- 55

Query: 74  RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEF 127
               G       I + +  ++   + KAG+               +F RDP    +  
Sbjct: 56  ---SGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINI 110

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 132

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 38.0 bits (87), Expect = 6e-05
 Identities = 13/120 (10%), Positives = 29/120 (24%), Gaps = 7/120 (5%)

Query: 9   VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 68
           +  + ++G   +++     F    +GL               A          +   P  
Sbjct: 2   IERLGYLGFAVKDVPAWDHFLTKSVGLM------AAGSAGDAALYRADQRAWRIAVQPGE 55

Query: 69  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGI-SYTLSKSGRPAIFTRDPDANALEF 127
                       D      + D  +   +    G  +    +     +  +DP    LE 
Sbjct: 56  LDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEI 115

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]} Length = 122

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

 Score = 37.4 bits (85), Expect = 8e-05
 Identities = 12/115 (10%), Positives = 27/115 (23%), Gaps = 9/115 (7%)

Query: 17  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 76
           +   ++  ++ F+ + LG E +              +  G   +H+    +         
Sbjct: 11  LTAVDVPANVSFWVDTLGFEKDFGDRDFA------GVRRGDIRLHISRTEHQIVADNTSA 64

Query: 77  HGGRDRHTCIAIRDVSKLKMILDKAGISYTL---SKSGRPAIFTRDPDANALEFT 128
                    +       +                          RDP  N + FT
Sbjct: 65  WIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFT 119

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 36.9 bits (84), Expect = 1e-04
 Identities = 15/115 (13%), Positives = 24/115 (20%), Gaps = 3/115 (2%)

Query: 17  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 76
           +   + + +  FY+  LG  I                 +     H    P     S    
Sbjct: 8   LPSRDFDSTAAFYER-LGFGI--VFRDAGWMILQRGDLMLEFFAHPGLDPLASWFSCCLR 64

Query: 77  HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD 131
                           +          +  L   G       DPD   L   Q +
Sbjct: 65  LDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE 119

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.0 bits (82), Expect = 4e-04
 Identities = 9/62 (14%), Positives = 20/62 (32%), Gaps = 1/62 (1%)

Query: 7  YGVVSVHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAEMIHLMEL 65
          + V   HH+   C +       +   LG+    ++          ++L    ++  L   
Sbjct: 8  FKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTA 67

Query: 66 PN 67
          P 
Sbjct: 68 PY 69

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	132
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.93
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.93
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.93
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.93
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.93
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.93
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.92
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.92
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.92
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.92
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.92
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.92
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.92
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.9
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.9
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.89
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.89
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.88
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.87
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.86
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.86
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.86
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.86
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.85
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.84
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.84
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.84
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.84
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.79
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.77
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.7
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.54
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.51
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.49
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.47
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.35
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.35
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	99.14
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.71
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	98.05
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	96.89
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	96.74
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	96.72
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	96.23
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	95.63
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	95.44
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	95.13
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	95.04
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	94.59
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	94.57
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	94.33
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	94.15
d1k4na_	190	Hypothetical protein YecM (EC4020) {Escherichia co	93.52
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	92.58
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	92.06
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	92.05
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	91.91
d2g3aa1	137	Probable acetyltransferase Atu2258 {Agrobacterium	91.77
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	90.76
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	90.26
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	89.89
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	89.58
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	88.88
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	88.58
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	88.47
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	88.37
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	87.86
d1y9wa1	140	Probable acetyltransferase BC2806 {Bacillus cereus	87.85
d2f06a1	71	Hypothetical protein BT0572 {Bacteroides thetaiota	87.48
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	87.21
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	87.15
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	86.99
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	85.8
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	85.6
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	81.78

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.93  E-value=3.6e-25  Score=130.46  Aligned_cols=116  Identities=15%  Similarity=0.214  Sum_probs=89.3

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCC-CCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD-KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   86 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   86 (132)
                      |+.+++||+|.|+|++++++||+++|||++....+.. .......++..++..+.+.......        ..+..|++|
T Consensus         1 Mi~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~f   72 (130)
T d1r9ca_           1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKLA--------ERSYNHIAF   72 (130)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCCCS--------SCCSCEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecCCEEEeeccccccc--------ccceeeeee
Confidence            5789999999999999999999999999987654433 2334566677777666665543322        145678999


Q ss_pred             EEC--CHHHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEeeC
Q 032856           87 AIR--DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        87 ~v~--d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      .++  |+++++++|+++|+++...    ..+.+++||+|||||.|||.+.+
T Consensus        73 ~v~~~dv~~~~~~l~~~gv~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~~  123 (130)
T d1r9ca_          73 KIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTGT  123 (130)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECCC
T ss_pred             cccHHHHHHHHHHHHHCCCeEecCCcccCCCEEEEEEECCCCCEEEEEECC
Confidence            886  8999999999999997543    24678999999999999998753

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.93  E-value=1.9e-25  Score=129.26  Aligned_cols=110  Identities=17%  Similarity=0.203  Sum_probs=88.3

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEEC
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR   89 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~   89 (132)
                      |+++|+.|.|+|+++|.+||+++||+++....+      ..+++..|+..+.+........     ...+...+++|.|+
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~------~~~~~~~g~~~l~l~~~~~~~~-----~~~~~~~~~~f~v~   69 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND------GFAQFTIGSHCLMLSQNHLVPL-----ENFQSGIIIHIEVE   69 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET------TEEEEEETTEEEEEESSCSSSC-----CCCCSCEEEEEECS
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC------CeEEEEEcCceeeeeecccCCC-----CCCCcceEEEEEEC
Confidence            579999999999999999999999999876543      3467888988777765433211     11233368999999


Q ss_pred             CHHHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEee
Q 032856           90 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        90 d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      |+++++++++++|+++..+    +.|.+.+||+|||||.|||++.
T Consensus        70 D~d~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          70 DVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             CHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEEC
T ss_pred             CHHHHHHHHHhhccccccceEEeeCCeEEEEEECCCCCEEEEEEe
Confidence            9999999999999987643    4567899999999999999985

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.93  E-value=1.2e-24  Score=129.81  Aligned_cols=114  Identities=24%  Similarity=0.375  Sum_probs=90.4

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA   87 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   87 (132)
                      |+.+++||+|.|+|++++++||+++||+++.....      ...++..++....+........   ......+..|++|.
T Consensus         1 Mi~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~h~~~~   71 (140)
T d1npba_           1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDLWVCLSYDEARQY---VPPQESDYTHYAFT   71 (140)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET------TEEEEEETTEEEEEEECTTCCC---CCGGGSCSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEec------cccccccccccceeeccccccc---CCCcCCccceeeee
Confidence            57899999999999999999999999999987644      3456777776666655433322   12233567889998


Q ss_pred             EC--CHHHHHHHHHhCCCeEEcc-CCCccEEEEeCCCCCeEEEEee
Q 032856           88 IR--DVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        88 v~--d~~~~~~~l~~~g~~~~~~-~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      ++  |+++++++|+++|+++... +.+++++||+|||||.|||.+.
T Consensus        72 ~~~~d~~~~~~~l~~~Gv~~~~~~~~~~~~~~~~DPdGn~iEi~~~  117 (140)
T d1npba_          72 VAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLELHVG  117 (140)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEECCCSSSEEEEEECTTCCEEEEEEC
T ss_pred             chHHHHHHHHHHHHHCCCeEeecCCCCceEEEEECCCCCEEEEEEC
Confidence            85  8999999999999998654 4578999999999999999764

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.93  E-value=3e-24  Score=127.13  Aligned_cols=111  Identities=22%  Similarity=0.358  Sum_probs=88.2

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA   87 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   87 (132)
                      |+.+++||+|.|+|++++++||+++||+++....+      ..+++..++..++..........      ..+..|++|.
T Consensus         1 mi~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~h~~~~   68 (134)
T d1nkia_           1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLWLCLSREPQYGGP------AADYTHYAFG   68 (134)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEEETTEEEEEEECTTCCCC------CSSSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEecc------ceeeeecCCeEEEEeeecccccc------ccccccchhc
Confidence            68899999999999999999999999999987655      34667888776666554433221      1334667766


Q ss_pred             E--CCHHHHHHHHHhCCCeEEccC-CCccEEEEeCCCCCeEEEEee
Q 032856           88 I--RDVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        88 v--~d~~~~~~~l~~~g~~~~~~~-~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      +  +|+++++++|+++|+++...+ .+.+++||+|||||.|||++.
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          69 IAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCCSSSCEEEEECTTCCEEEEESC
T ss_pred             cccchHHHHHHHHHHCCCcCccCCCcceeEEEEECCCCCEEEEEEC
Confidence            6  599999999999999986654 467899999999999999763

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.93  E-value=1.9e-24  Score=129.88  Aligned_cols=124  Identities=14%  Similarity=0.227  Sum_probs=91.8

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCC-----------CCCCceeEEEEeCC--eEEEEEecCCCCCCC-
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPH-----------DKLPYRGAWLWVGA--EMIHLMELPNPDPLS-   72 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~-----------~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~-   72 (132)
                      ..+++++||+|.|+|++++.+||++ ||++...+...           .......+++...+  ..++++......... 
T Consensus         5 ~~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~   83 (149)
T d1ss4a_           5 NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIAD   83 (149)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCB
T ss_pred             CCCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCccc
Confidence            4678999999999999999999999 99988764321           12223455565533  466666544332221 


Q ss_pred             --CCCCCCCCceEEEEEECCHHHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEeeC
Q 032856           73 --GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        73 --~~~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                        .......++.|++|.|+|+++++++|+++|+++..+    +.+.+.+|++||||+.|||+|.=
T Consensus        84 ~~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~e~~  148 (149)
T d1ss4a_          84 HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAEEL  148 (149)
T ss_dssp             CTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEEEC
T ss_pred             ccccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCCCeEEEEEECCCCCEEEEEEcc
Confidence              122334568899999999999999999999988543    35678899999999999999864

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.93  E-value=2.8e-25  Score=133.10  Aligned_cols=124  Identities=16%  Similarity=0.223  Sum_probs=86.3

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCC-CceeEEEEeCC----eEEEEEecCCCCCCCCCCCCCCC
Q 032856            6 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKL-PYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGR   80 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~-~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~   80 (132)
                      |..+.+++||+|.|+|++++++||+++||+++..+...... .....++..+.    ..+.+........   .....++
T Consensus         1 m~~i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~   77 (144)
T d1zswa1           1 MYEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGR---TYRGTNA   77 (144)
T ss_dssp             SSCCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCB---CBCCBSE
T ss_pred             CCcccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccC---CccCCCc
Confidence            45689999999999999999999999999998865432211 11111222211    1233332222211   1122356


Q ss_pred             ceEEEEEECC---HHHHHHHHHhCCCeEEcc--CCCccEEEEeCCCCCeEEEEeeCC
Q 032856           81 DRHTCIAIRD---VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVDG  132 (132)
Q Consensus        81 ~~hi~~~v~d---~~~~~~~l~~~g~~~~~~--~~~~~~~~~~Dp~G~~iel~~~~~  132 (132)
                      +.|+||.|+|   ++++.++|++.|+.+...  ..+.+++||+|||||.|||++.++
T Consensus        78 ~~Hiaf~v~~~~~l~~~~~~l~~~gv~~~~~~~~~~~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1          78 ITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHHTTCEECCSEEETTEEEEEEECTTCCEEEEEECTT
T ss_pred             eeEEEEecCCchhHHHHhhhhhccceeeeCccccCCeEEEEEECCCCCEEEEEEeCC
Confidence            7899999998   677899999999987543  357899999999999999998753

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.92  E-value=1e-24  Score=128.84  Aligned_cols=108  Identities=16%  Similarity=0.143  Sum_probs=85.3

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA   87 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   87 (132)
                      +|++|+||+|.|+|++++++||+++|||++..+.+      ..++++.++....+.....+.         .++.|++|.
T Consensus         1 ~I~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~l~l~~~~~---------~~~~h~~f~   65 (131)
T d1lgta1           1 SIRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSRAWRIAVQQGEV---------DDLAFAGYE   65 (131)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEECTT---------CEEEEEEEE
T ss_pred             CcccccEEEEEeCCHHHHHHHHHHhhCCceeecCC------cceEEeecCCceEEEEecCCC---------CCceEEEEE
Confidence            47899999999999999999999999999987644      457788776543333322221         467899999


Q ss_pred             EC---CHHHHHHHHHhCCCeEEccC-------CCccEEEEeCCCCCeEEEEee
Q 032856           88 IR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        88 v~---d~~~~~~~l~~~g~~~~~~~-------~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      |.   +++++.++|+++|+++...+       ...+.+||+|||||.|||+..
T Consensus        66 v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~  118 (131)
T d1lgta1          66 VADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYG  118 (131)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             EccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeC
Confidence            96   56778999999999987543       356789999999999999753

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.92  E-value=7.1e-25  Score=131.07  Aligned_cols=125  Identities=14%  Similarity=0.223  Sum_probs=93.1

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEE------eCCeEEEEEecCCCCCCCC----CCC
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW------VGAEMIHLMELPNPDPLSG----RPE   76 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~~~~~~~~----~~~   76 (132)
                      .|+++|+||+|.|+|+++|.+||+++||+++.........+...++..      .+...++++..........    ...
T Consensus         3 ~m~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~   82 (145)
T d1jc4a_           3 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHN   82 (145)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTT
T ss_pred             ccceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccC
Confidence            468999999999999999999999999999876655444443333322      2456788877655433221    123


Q ss_pred             CCCCceEEEEEECCHHHHHHHHHhCCCeEEcc-----CCCccEEEE--eCCCCCeEEEEeeC
Q 032856           77 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLS-----KSGRPAIFT--RDPDANALEFTQVD  131 (132)
Q Consensus        77 ~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~-----~~~~~~~~~--~Dp~G~~iel~~~~  131 (132)
                      ...++.|+||.|+|+++++++|+++|+++...     ..+.+.+|+  +||+|+.|||+|++
T Consensus        83 ~~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          83 GRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             TCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            35678999999999999999999999997532     234445555  79999999999986

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.92  E-value=1.5e-24  Score=124.84  Aligned_cols=106  Identities=16%  Similarity=0.233  Sum_probs=79.7

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCC-eEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   88 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   88 (132)
                      |+++||+|.|+|++++++||+++|||+.......     ..+++..++ ..+.+.......        .++..|++|.|
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~--------~~~~~h~~f~v   68 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN-----AFAVMRDNDGFILTLMKGKEVQ--------YPKTFHVGFPQ   68 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT-----TEEEEECTTCCEEEEEECSSCC--------CCTTCCEEEEC
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC-----cceeeeecceeeeeeeeeeccc--------ccccceeeeee
Confidence            6899999999999999999999999999775431     233333333 345554432221        24568999999


Q ss_pred             CC---HHHHHHHHHhCCCeEEccC-CCccEEEEeCCCCCeEEEE
Q 032856           89 RD---VSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFT  128 (132)
Q Consensus        89 ~d---~~~~~~~l~~~g~~~~~~~-~~~~~~~~~Dp~G~~iel~  128 (132)
                      +|   +++++++++++|+++...+ .+++++||+|||||.|||.
T Consensus        69 ~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          69 ESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCCCEEC-CEEEEEEETTTEEEEEE
T ss_pred             ccccchhhhhhhHHHcCCccccCCCCceEEEEEECCCCCEEEEE
Confidence            86   6668899999999876544 4578999999999999995

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.92  E-value=9e-25  Score=134.33  Aligned_cols=117  Identities=12%  Similarity=0.179  Sum_probs=84.4

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCe---EEEEEecCCCCCCCCCCCCCCCc
Q 032856            5 GDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE---MIHLMELPNPDPLSGRPEHGGRD   81 (132)
Q Consensus         5 ~~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~   81 (132)
                      ....|.+++||+|.|+|++++.+||+++|||++..+.+.     ..++...++.   .+.+.....+.   .. ...+++
T Consensus         6 ~~~~I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~l   76 (170)
T d1zswa2           6 AKHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ-----EAIFQSIKGEAFGEIVVKYLDGPT---EK-PGRGSI   76 (170)
T ss_dssp             GGGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECSS-----EEEEESSTTCSTTCEEEEECCSSB---CB-CCBTCE
T ss_pred             hhHHhCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecCc-----eEEEEeccCccceEEEeccccccc---cc-cCcccc
Confidence            345789999999999999999999999999999886441     2233333222   12222211111   11 122467


Q ss_pred             eEEEEEECC---HHHHHHHHHhCCCeEEcc--CCCccEEEEeCCCCCeEEEEee
Q 032856           82 RHTCIAIRD---VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        82 ~hi~~~v~d---~~~~~~~l~~~g~~~~~~--~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      .|++|.|+|   ++++++++++.|+++...  +...+++||+|||||.|||.+.
T Consensus        77 ~HiAf~V~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~s~Yf~DPdG~~iEl~t~  130 (170)
T d1zswa2          77 HHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESNGILFEIATD  130 (170)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTTCCCCCCEECSSEEEEEEECTTCCEEEEEEE
T ss_pred             ceEEEEeCChHHHHHHHHHHHhcCCCccccccCCCEEEEEEECCCCcEEEEEEC
Confidence            899999986   667799999999987543  4567899999999999999875

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.92  E-value=3.2e-24  Score=130.92  Aligned_cols=117  Identities=15%  Similarity=0.244  Sum_probs=85.7

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   86 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   86 (132)
                      |..++++||+|.|+|++++++||+++|||++..+...........++..+...........+.        .++..|+++
T Consensus         1 m~~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~h~~~   72 (162)
T d1mpya2           1 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHPE--------KGRLHHVSF   72 (162)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEECSS--------SSEEEEEEE
T ss_pred             CCcccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeecccccccccccccCC--------CCccceeEE
Confidence            456889999999999999999999999999987655455444445555544322222211111        256889999


Q ss_pred             EECCHH---HHHHHHHhCCCeEEccC-----CCccEEEEeCCCCCeEEEEeeC
Q 032856           87 AIRDVS---KLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        87 ~v~d~~---~~~~~l~~~g~~~~~~~-----~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      .+.+++   +++++|++.|+++..++     .+.+++||+|||||.|||++..
T Consensus        73 ~~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~  125 (162)
T d1mpya2          73 HLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGG  125 (162)
T ss_dssp             ECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECC
T ss_pred             EEeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECC
Confidence            998766   56899999999876432     3457899999999999998753

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.92  E-value=2.4e-24  Score=127.37  Aligned_cols=108  Identities=13%  Similarity=0.140  Sum_probs=85.9

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA   87 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   87 (132)
                      +|.+|+||+|.|+|++++++||+++|||++..+..      ..+|++.++....+.....+.         .+..|++|.
T Consensus         1 ~i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~l~~~~~~~---------~~~~h~~f~   65 (132)
T d1kw3b1           1 SIERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQRAWRIAVQPGEL---------DDLAYAGLE   65 (132)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEECTT---------CEEEEEEEE
T ss_pred             CcccccEEEEEeCCHHHHHHHHHHHhCCceecccc------ceeeeeeeecceeeeeeccCC---------CCceEEEEE
Confidence            47899999999999999999999999999987644      457788876543343332221         468899999


Q ss_pred             EC---CHHHHHHHHHhCCCeEEccC-------CCccEEEEeCCCCCeEEEEee
Q 032856           88 IR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        88 v~---d~~~~~~~l~~~g~~~~~~~-------~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      |+   |++++.++++++|+++...+       .....+||+||+||.|||+..
T Consensus        66 v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~  118 (132)
T d1kw3b1          66 VDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYG  118 (132)
T ss_dssp             CSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             eccHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEEC
Confidence            96   57778999999999987543       345689999999999999854

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=1.5e-24  Score=127.86  Aligned_cols=118  Identities=20%  Similarity=0.328  Sum_probs=84.1

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCe----EEEEEecCCCCCCCCCCCCCCCceEEE
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHTC   85 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~hi~   85 (132)
                      |++.|++|.|+|+++|.+||+++|||++....+........++......    ..........    .......+..|++
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~   76 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV----DKYELGTAYGHIA   76 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTC----CCCCCCSSEEEEE
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeecccccccccccc----ccccccccceeec
Confidence            6899999999999999999999999999876554444333333333211    1111111111    1122335678999


Q ss_pred             EEECCHHHHHHHHHhCCCeEEcc-----CCCccEEEEeCCCCCeEEEEeeC
Q 032856           86 IAIRDVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        86 ~~v~d~~~~~~~l~~~g~~~~~~-----~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      +.+++++.+.++++++|..+...     ..+.+.+|++|||||.|||+|.+
T Consensus        77 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~  127 (135)
T d1f9za_          77 LSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEK  127 (135)
T ss_dssp             EECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-
T ss_pred             cchHHHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECC
Confidence            99999999999999999987542     23567889999999999999875

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1e-22  Score=125.57  Aligned_cols=125  Identities=16%  Similarity=0.217  Sum_probs=88.8

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCC-------------------eEEEEEecCC
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-------------------EMIHLMELPN   67 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~l~~~~~   67 (132)
                      ....+++|++|.|+|+++|++||+++|||++.........+...++...+.                   ....+.....
T Consensus        19 ~~~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (176)
T d1qipa_          19 TKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWG   98 (176)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETT
T ss_pred             ccceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeec
Confidence            345579999999999999999999999999876555444444555444322                   1222222221


Q ss_pred             C--C-C--CCCCCCCCCCceEEEEEECCHHHHHHHHHhCCCeEEccC---CCccEEEEeCCCCCeEEEEeeC
Q 032856           68 P--D-P--LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        68 ~--~-~--~~~~~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~---~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      .  . .  .........++.|+++.++|++++.++|+++|+++...+   .+.+.+|++|||||.|||+|.+
T Consensus        99 ~~~~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~~~~~f~~DPdG~~IElvq~~  170 (176)
T d1qipa_          99 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  170 (176)
T ss_dssp             GGGCTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSSTTCEEEECTTCCEEEEECTT
T ss_pred             cccccCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCceEEEEEECCCCCEEEEEeCC
Confidence            1  1 1  111112345788999999999999999999999987654   2356789999999999999875

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.90  E-value=1.9e-23  Score=123.53  Aligned_cols=118  Identities=21%  Similarity=0.275  Sum_probs=85.9

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCe---EEEEEecCCCCCCCCCCCCCCCceEEEE
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE---MIHLMELPNPDPLSGRPEHGGRDRHTCI   86 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~hi~~   86 (132)
                      +++.||+|.|+|+++|++||+++|||++.....................   ...........   ..........++++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   78 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGV---TSYKHDEAYGHIAI   78 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTC---CCCCCCSSEEEEEE
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCc---ccccCCCccceeee
Confidence            5899999999999999999999999999876553333322222222221   11111111111   11223355678999


Q ss_pred             EECCHHHHHHHHHhCCCeEEccCCCccEEEEeCCCCCeEEEEee
Q 032856           87 AIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        87 ~v~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      .+++++.+++++.+.++++...+.+.+.+||+|||||.|||++.
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~iEl~~~  122 (139)
T d2c21a1          79 GVEDVKELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIELLNE  122 (139)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEECSSSSEEEEECTTSCEEEEEEH
T ss_pred             ehhhHHHHHHHHHHcCCceeeCCCCcEEEEEECCCCCEEEEEEC
Confidence            99999999999999999988888888999999999999999985

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.89  E-value=7.4e-23  Score=122.80  Aligned_cols=110  Identities=20%  Similarity=0.238  Sum_probs=82.2

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCceE
Q 032856            6 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH   83 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~h   83 (132)
                      .+.+++++||.|.|+|++++++||+++|||+......      ...++...+.  .+.+......         ..++.|
T Consensus        11 ~~~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---------~~~~~h   75 (146)
T d1f1ua1          11 APDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLRQGP---------IAAVAA   75 (146)
T ss_dssp             CCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEECS---------SCEEEE
T ss_pred             CCCCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC------CceeeecccccccceeeccccC---------CCCCce
Confidence            4569999999999999999999999999999988644      2344443221  1111111111         146789


Q ss_pred             EEEEEC---CHHHHHHHHHhCCCeEEccC-----CCccEEEEeCCCCCeEEEEee
Q 032856           84 TCIAIR---DVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        84 i~~~v~---d~~~~~~~l~~~g~~~~~~~-----~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      ++|.+.   |++++.++|+++|+++...+     ..++++||+|||||.|||+..
T Consensus        76 ~~~~~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~  130 (146)
T d1f1ua1          76 FAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYE  130 (146)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             eeEeeccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEe
Confidence            999997   67888999999999886432     236899999999999999863

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.89  E-value=7.7e-23  Score=121.49  Aligned_cols=121  Identities=17%  Similarity=0.161  Sum_probs=84.9

Q ss_pred             eeeeeeEEEEe----CCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEE
Q 032856            9 VVSVHHVGILC----ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   84 (132)
Q Consensus         9 ~~~~~hv~i~v----~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi   84 (132)
                      +.++.|+.++|    +|++++++||+++|||++..+... ..++..+++..++..+++.....+..  ......++..|+
T Consensus         3 ~~~~~~~~~RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~hl   79 (137)
T d1twua_           3 FSSFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHADYHLEFTQYEGG--STAPVPHPDSLL   79 (137)
T ss_dssp             CSSCBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSSSEEEEEEEETTC--CCCCCCCTTCEE
T ss_pred             cCCCceEEEEEecccCCHHHHHHHHHhccCCceeeeecc-ccceeEEEecCCCCceeeeccccccc--ccccccccCceE
Confidence            44555655554    799999999999999998765442 23346677777665444433222211  112223556899


Q ss_pred             EEEECC---HHHHHHHHHhCCCeEEccC---CCccEEEEeCCCCCeEEEEeeCC
Q 032856           85 CIAIRD---VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVDG  132 (132)
Q Consensus        85 ~~~v~d---~~~~~~~l~~~g~~~~~~~---~~~~~~~~~Dp~G~~iel~~~~~  132 (132)
                      +|.|+|   +++++++|+++|+++..++   .+.+.+||.||||+.|||..+.+
T Consensus        80 af~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPDG~~Iel~~~~~  133 (137)
T d1twua_          80 VFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSKG  133 (137)
T ss_dssp             EEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESSCC
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCeEeCCCCCCCCceEEEEECCCCCEEEEEcCCC
Confidence            999986   7778899999999987644   35688999999999999997653

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.88  E-value=3.6e-22  Score=114.26  Aligned_cols=106  Identities=18%  Similarity=0.213  Sum_probs=77.4

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEEC
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR   89 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~   89 (132)
                      +++ +.+|.|+|+++|++||+++|||++....+      ....+..++....+........      ......|++|.++
T Consensus         2 ~ri-~~~l~v~d~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~   68 (111)
T d2pjsa1           2 RRV-VANIATPEPARAQAFYGDILGMPVAMDHG------WIVTHASPLEAHAQVSFAREGG------SGTDVPDLSIEVD   68 (111)
T ss_dssp             EEE-EEEEECSCGGGGHHHHTTTTCCCEEEECS------SEEEEEEEEEEEEEEEEESSSB------TTBCCCSEEEEES
T ss_pred             eEE-EEEEEeCCHHHHHHHHHHhhCCceeeccc------ceeEeccccccceeeecccccC------CCCceeEEEEEec
Confidence            445 68899999999999999999999987644      2233444333333332222211      1133468999999


Q ss_pred             CHHHHHHHHHhCCCeEEc----cCCCccEEEEeCCCCCeEEEE
Q 032856           90 DVSKLKMILDKAGISYTL----SKSGRPAIFTRDPDANALEFT  128 (132)
Q Consensus        90 d~~~~~~~l~~~g~~~~~----~~~~~~~~~~~Dp~G~~iel~  128 (132)
                      |+++++++++++|+++..    .+.|.+.+|++|||||.|||+
T Consensus        69 dvd~~~~~l~~~g~~~~~~p~~~~~g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          69 NFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             CHHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             CHHHHHHHHHhhccccccCCeEcCCCcEEEEEECCCCCEEEeC
Confidence            999999999999998643    245778999999999999985

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.87  E-value=7.9e-22  Score=115.70  Aligned_cols=117  Identities=19%  Similarity=0.242  Sum_probs=81.3

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeC-CeEEEEEecCCC--CCCCCCCCCCCCceEEEE
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNP--DPLSGRPEHGGRDRHTCI   86 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~--~~~~~~~~~~~~~~hi~~   86 (132)
                      .+|+||+|.|+|++++++||++ ||+.........    ..+.+..+ ...+.+......  ..........++..|++|
T Consensus         1 ~ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   75 (128)
T d1klla_           1 ARISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSA----PHTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIAF   75 (128)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGC----SEEEEECGGGCEEEEEEHHHHHHHCTTCCCCCSSCSCEEEE
T ss_pred             CeEeEEEEEcCCHHHHHHHHHH-hCCccccccccc----cceeeeccceeeeeecccccccccCCCCCCCccccceeEee
Confidence            3789999999999999999977 888876654422    22334443 335544432211  111111223345579999


Q ss_pred             EECC---HHHHHHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEeeC
Q 032856           87 AIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        87 ~v~d---~~~~~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      .|++   +++++++|+++|+++..+    +.|.+.+|++|||||.|||++.-
T Consensus        76 ~v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~G~~~~~~~DPdG~~iel~~p~  127 (128)
T d1klla_          76 EFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPL  127 (128)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             eeccchhhHHHHHHHHhccCccccCCeEcCCCcEEEEEECCCCCEEEEEecC
Confidence            9986   667899999999987543    35678999999999999999864

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.86  E-value=1.5e-21  Score=120.42  Aligned_cols=112  Identities=17%  Similarity=0.223  Sum_probs=81.4

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   88 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   88 (132)
                      +++|+||+|.|+|++++++|| +.|||+++............+++..+...+.+.....+         ..+..|++|.+
T Consensus         3 i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~H~~f~~   72 (176)
T d1f1ua2           3 LVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGN---------GPRMHHVAFAT   72 (176)
T ss_dssp             CCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEESS---------BSEEEEEEEEC
T ss_pred             eeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCccccceeccccc---------CCCccceeEEe
Confidence            678999999999999999999 67999998765544444455666655443333332222         14689999999


Q ss_pred             CCHHH---HHHHHHhCCCeE--Ecc-----CCCccEEEEeCCCCCeEEEEee
Q 032856           89 RDVSK---LKMILDKAGISY--TLS-----KSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        89 ~d~~~---~~~~l~~~g~~~--~~~-----~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      .+++.   +.++|+++|+..  ...     .....++||+|||||.|||+..
T Consensus        73 ~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~  124 (176)
T d1f1ua2          73 HEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQ  124 (176)
T ss_dssp             SSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             ccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeC
Confidence            86555   567999999854  222     2345689999999999999864

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.86  E-value=1.3e-21  Score=117.05  Aligned_cols=109  Identities=17%  Similarity=0.171  Sum_probs=77.0

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCceEEE
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTC   85 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hi~   85 (132)
                      .+++|+||.|.|+|++++++||+++|||++..+....     ..+......  ...+......         ..+..|++
T Consensus         4 ~i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~   69 (145)
T d1mpya1           4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQG-----RVYLKAWTEVDKFSLVLREAD---------EPGMDFMG   69 (145)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTTS-----CEEEECTTCCBSCSEEEEECS---------SCEEEEEE
T ss_pred             CCcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeeccC-----ccceecccccceeeccccccC---------cccceeee
Confidence            4899999999999999999999999999988764421     122222221  1111111111         13356677


Q ss_pred             EEEC---CHHHHHHHHHhCCCeEEccC-----CCccEEEEeCCCCCeEEEEee
Q 032856           86 IAIR---DVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        86 ~~v~---d~~~~~~~l~~~g~~~~~~~-----~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      +.+.   |+++++++|+++|+++...+     ..++.+||+|||||.|||++.
T Consensus        70 ~~~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~  122 (145)
T d1mpya1          70 FKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYAD  122 (145)
T ss_dssp             EEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESC
T ss_pred             eeehhHHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEe
Confidence            7765   78888999999999876432     235899999999999999864

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.86  E-value=1.2e-21  Score=119.44  Aligned_cols=126  Identities=13%  Similarity=0.116  Sum_probs=94.4

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCC--CCceeEEEEeCCeEEEEEecCCCCCCCCC------CCC
Q 032856            6 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK--LPYRGAWLWVGAEMIHLMELPNPDPLSGR------PEH   77 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~   77 (132)
                      +.++.+++||+|.|+|+++|.+||+++|||++......+.  .....+.+..++..+.+............      ...
T Consensus         2 p~~i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~   81 (163)
T d1t47a1           2 PFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEH   81 (163)
T ss_dssp             CSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHHH
T ss_pred             CCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEeccCCCCCccccccchhhhcC
Confidence            4678999999999999999999999999999876443222  22344556667778888776554322110      122


Q ss_pred             CCCceEEEEEECCHHHHHHHHHhCCCeEEccC------C-CccEEEEeCCCCCeEEEEeeC
Q 032856           78 GGRDRHTCIAIRDVSKLKMILDKAGISYTLSK------S-GRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        78 ~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~------~-~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      +.++.|+||+|+|+++++++|+++|+++...+      . ....+++++|+|..++|+|..
T Consensus        82 g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~  142 (163)
T d1t47a1          82 GDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRT  142 (163)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             CCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEecc
Confidence            46789999999999999999999999876533      1 236789999999999998863

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.7e-21  Score=117.05  Aligned_cols=127  Identities=13%  Similarity=0.101  Sum_probs=92.8

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCC--ceeEEEEeCCeEEEEEecCCCCCCCC-C--CCCCCC
Q 032856            6 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP--YRGAWLWVGAEMIHLMELPNPDPLSG-R--PEHGGR   80 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~-~--~~~~~~   80 (132)
                      ...+.+++||+|.|+|+++|.+||+++|||++......+...  ...+.+..++..+.+........... .  ..++.+
T Consensus         6 ~~~~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~G   85 (149)
T d1sqia1           6 RGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKEMGDHLVKHGDG   85 (149)
T ss_dssp             SCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSE
T ss_pred             CCceeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEeccCCCCchhhhhhhhCCCe
Confidence            456889999999999999999999999999987654432222  23334555777777776554432110 0  123567


Q ss_pred             ceEEEEEECCHHHHHHHHHhCCCeEEccC------CC-ccEEEEeCCCCCeEEEEeeCC
Q 032856           81 DRHTCIAIRDVSKLKMILDKAGISYTLSK------SG-RPAIFTRDPDANALEFTQVDG  132 (132)
Q Consensus        81 ~~hi~~~v~d~~~~~~~l~~~g~~~~~~~------~~-~~~~~~~Dp~G~~iel~~~~~  132 (132)
                      +.|+||.|+|+++++++|+++|+++..+|      .| .+.++++.|+|..++|+|+.+
T Consensus        86 ~~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~  144 (149)
T d1sqia1          86 VKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKIN  144 (149)
T ss_dssp             EEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEES
T ss_pred             EEEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCC
Confidence            89999999999999999999999875433      22 246788888889999999753

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.85  E-value=6.8e-21  Score=115.31  Aligned_cols=115  Identities=16%  Similarity=0.215  Sum_probs=79.2

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCC---CCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEE
Q 032856            8 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD---KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   84 (132)
Q Consensus         8 ~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi   84 (132)
                      ...+|+|++|.|+|++++++||+++|||++.......   .......++..+...+.+.....+.        ..++.|+
T Consensus         7 ~~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~a~~~~~~--------~~gl~Hi   78 (156)
T d1kw3b2           7 GDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFPI--------PKRIHHF   78 (156)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECCSC--------SSSEEEE
T ss_pred             CCCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccccceeeeccCCC--------CCceeEE
Confidence            3468999999999999999999999999987643211   1112334444444333333222221        2568999


Q ss_pred             EEEECCHHH---HHHHHHhCCCeEEcc-C---CCccEEEEeCCCCC-eEEEEee
Q 032856           85 CIAIRDVSK---LKMILDKAGISYTLS-K---SGRPAIFTRDPDAN-ALEFTQV  130 (132)
Q Consensus        85 ~~~v~d~~~---~~~~l~~~g~~~~~~-~---~~~~~~~~~Dp~G~-~iel~~~  130 (132)
                      +|+|+++++   ++++|+++|+....+ +   +...++|++||+|+ .+|+...
T Consensus        79 af~v~~~ddv~~~~d~l~~~G~~~~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~  132 (156)
T d1kw3b2          79 MLQANTIDDVGYAFDRLDAAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWG  132 (156)
T ss_dssp             EEEBSSHHHHHHHHHHHHHTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEEC
T ss_pred             EEECCCHHHHHHHHHHHHhcCCceecCcccCCCCeEEEEEECCCCCeEEEEecC
Confidence            999986655   589999999865322 1   34689999999998 5888653

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.84  E-value=3.7e-20  Score=107.45  Aligned_cols=101  Identities=17%  Similarity=0.188  Sum_probs=80.8

Q ss_pred             EEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECCHHHHH
Q 032856           16 GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK   95 (132)
Q Consensus        16 ~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~~~~~   95 (132)
                      .|.|+|+++|++||+++|||++....+      ..+++..++..+++........        ....++.+.++|+++++
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~~--------~~~~~~~~~~~~i~~~~   75 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR------DFAGVRRGDIRLHISRTEHQIV--------ADNTSAWIEVTDPDALH   75 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCHHH--------HTTCEEEEEESCHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC------ceeEeeeeeeeeeeeccccccc--------cceeEEEEeechhHHHH
Confidence            489999999999999999999887644      3567888888888877654321        22457999999999999


Q ss_pred             HHHHhCCCeEEc-----------cCCCccEEEEeCCCCCeEEEEee
Q 032856           96 MILDKAGISYTL-----------SKSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        96 ~~l~~~g~~~~~-----------~~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      +++++++.....           .+.+++++|++|||||+|||.+.
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          76 EEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             HHHHhhcceEEeeccccccCccccCCCeEEEEEECCCCCEEEEEeC
Confidence            999999876531           12467899999999999999864

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.84  E-value=1.5e-19  Score=104.70  Aligned_cols=102  Identities=23%  Similarity=0.332  Sum_probs=80.1

Q ss_pred             EEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECCHHHHH
Q 032856           16 GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK   95 (132)
Q Consensus        16 ~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~~~~~   95 (132)
                      .|.|+|+++|++||++ |||++....+      ..+++..++..+.+.........       ....++++.|+|+++++
T Consensus         7 ~l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~d~~~~~   72 (120)
T d1ecsa_           7 NLPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGDLMLEFFAHPGLDPL-------ASWFSCCLRLDDLAEFY   72 (120)
T ss_dssp             EEEESCHHHHHHHHHT-TTCEEEEECS------SEEEEEETTEEEEEEECTTCCGG-------GCCCEEEEEESCHHHHH
T ss_pred             EEEeCCHHHHHHHHHH-cCCeeEEecC------ceeeeecceeccccccccccccC-------CCCcEEEEEECCHHHHH
Confidence            3999999999999998 9999987544      34667777777777665543221       23457999999999999


Q ss_pred             HHHHhCCCeEEc-----------cCCCccEEEEeCCCCCeEEEEeeC
Q 032856           96 MILDKAGISYTL-----------SKSGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        96 ~~l~~~g~~~~~-----------~~~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                      +.++++|+.+..           .+.|.+.+||+|||||.|||.|.+
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          73 RQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             HHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECC
T ss_pred             HHHhhhhhhhccccccccccceecCCCcEEEEEECCCCCEEEEEEcc
Confidence            999999887632           234678999999999999999864

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.84  E-value=6.2e-20  Score=112.12  Aligned_cols=128  Identities=15%  Similarity=0.138  Sum_probs=92.0

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCce--eEEEEeCCeEEEEEecCCCCCCCC---------
Q 032856            5 GDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYR--GAWLWVGAEMIHLMELPNPDPLSG---------   73 (132)
Q Consensus         5 ~~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~---------   73 (132)
                      ..+.+.+++||+|.|+|++++.+||+++|||+...+...+.....  ...+..++..+.+...........         
T Consensus         6 ~~~~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~   85 (167)
T d1sqda1           6 DKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTAS   85 (167)
T ss_dssp             CSSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCS
T ss_pred             CCCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEeccccccccccccccccccc
Confidence            457899999999999999999999999999998775443322222  222444555555544322211100         


Q ss_pred             CC------------CCCCCceEEEEEECCHHHHHHHHHhCCCeEEccC----CCccEEEEeCCCCCeEEEEeeCC
Q 032856           74 RP------------EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVDG  132 (132)
Q Consensus        74 ~~------------~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~----~~~~~~~~~Dp~G~~iel~~~~~  132 (132)
                      .+            .++.|+.|+||.|+|+++++++|+++|+++..+|    ++.+.+++..+++...+|+++.+
T Consensus        86 ~~~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~~~~~a~I~~~gd~~~~~v~r~~  160 (167)
T d1sqda1          86 IPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKA  160 (167)
T ss_dssp             STTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEECC
T ss_pred             cccCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCCCEEEEEEEccCCcEEEEEecCC
Confidence            00            0135789999999999999999999999876543    45677899999889999999864

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.84  E-value=8.9e-20  Score=111.96  Aligned_cols=128  Identities=13%  Similarity=0.114  Sum_probs=92.7

Q ss_pred             CCCceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCc--eeEEEEeCCeEEEEEecCCCCCCCC---CC---
Q 032856            4 EGDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY--RGAWLWVGAEMIHLMELPNPDPLSG---RP---   75 (132)
Q Consensus         4 ~~~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~---~~---   75 (132)
                      .....+++++||+|.|+|++++++||++.|||+............  ....+..+...+.+...........   ..   
T Consensus         6 ~d~~~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (172)
T d1sp8a1           6 SDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFS   85 (172)
T ss_dssp             CCSSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCC
T ss_pred             CccCCcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhcccccCC
Confidence            345789999999999999999999999999999876544332222  2222444555555544333221110   00   


Q ss_pred             ---------CCCCCceEEEEEECCHHHHHHHHHhCCCeEEccC----CCccEEEEeCCCCCeEEEEeeC
Q 032856           76 ---------EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  131 (132)
Q Consensus        76 ---------~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~----~~~~~~~~~Dp~G~~iel~~~~  131 (132)
                               .++.++.|+||.|+|+++++++|+++|+++..+|    ++.+.+++..|.+..++|+|++
T Consensus        86 ~~~~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g~~~a~v~~~g~~~~~lve~~  154 (172)
T d1sp8a1          86 AAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYP  154 (172)
T ss_dssp             HHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECC
T ss_pred             cchhhhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCCEEEEEEECCCCcEEEEEecC
Confidence                     1246789999999999999999999999986544    4667888888888889999876

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.79  E-value=4.6e-18  Score=98.02  Aligned_cols=102  Identities=12%  Similarity=0.125  Sum_probs=78.9

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECCHHH
Q 032856           14 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK   93 (132)
Q Consensus        14 hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~~~   93 (132)
                      +..|.|+|++++++||+++|||++..+.+      ..+++..++..+++........        .+..++.+.+++++.
T Consensus         7 ~pvL~v~D~~~s~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~--------~~~~~~~~~~~~~~~   72 (120)
T d1xrka_           7 VPVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDDVTLFISAVQDQVV--------PDNTQAWVWVRGLDE   72 (120)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCTTT--------GGGCEEEEEEECHHH
T ss_pred             EEEEEECCHHHHHHHHHHhhCCeEEEECC------CeeEEecccceeeccccccccC--------CCCceEEEeeccHHH
Confidence            34599999999999999999999987654      3466788888888876654432        334678999999999


Q ss_pred             HHHHHHhCCCeEEc--------c---CCCccEEEEeCCCCCeEEEEe
Q 032856           94 LKMILDKAGISYTL--------S---KSGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        94 ~~~~l~~~g~~~~~--------~---~~~~~~~~~~Dp~G~~iel~~  129 (132)
                      ..+.+.+++.....        +   .++++.+|++|||||.|||+.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          73 LYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             HHHHHTTTSBSCTTTCSSCEECCCEEETTEEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHHhhhHHhhhcccccccCceecCCEEEEEEECCCCCEEEEEE
Confidence            99888877654321        1   135689999999999999986

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.77  E-value=2.2e-17  Score=97.30  Aligned_cols=115  Identities=10%  Similarity=0.029  Sum_probs=80.3

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCCeeeccCCCC-------CCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 032856           14 HVGILCENLERSLEFYQNILGLEINEARPHD-------KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   86 (132)
Q Consensus        14 hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   86 (132)
                      ++.+.+.|+++|.+||+++||++.......+       ......+.+.+++..+.+.......... .....+...++++
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~   88 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFS-TAKSEGSGVTFLL   88 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTTCC-CCCTTSCCCEEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECCeeeeccccccccccc-cCCCCCcceEEEE
Confidence            4556677999999999999999987644321       1122345677787776665543322211 1222233468999


Q ss_pred             EECCHHHHHHHHHhCCCeEEccC----CCccEEEEeCCCCCeEEEEe
Q 032856           87 AIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        87 ~v~d~~~~~~~l~~~g~~~~~~~----~~~~~~~~~Dp~G~~iel~~  129 (132)
                      .|+|+++++.++.++|.++..++    .+.+.++++||+|+.|+|.|
T Consensus        89 ~v~d~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          89 GTKDAEAAVAKAVDAGAVKVEVTEAEVELGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             ECSCHHHHHHHHHHTTCEECCCCHHHHHTTEEEEEECTTSCEEEEEC
T ss_pred             eecCcceeEEEeecccceEecCcccccccCEEEEEECCCCCEEEEeC
Confidence            99999999999999999987654    47789999999999999976

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.70  E-value=1.2e-17  Score=100.07  Aligned_cols=119  Identities=10%  Similarity=0.066  Sum_probs=86.7

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCC--CCCCCCce
Q 032856            5 GDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR--PEHGGRDR   82 (132)
Q Consensus         5 ~~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~   82 (132)
                      +++.+.+++||+|.|.|++++.+||++ |||+...+....    ....++.|+..+.+  ..+..+....  ..++.++.
T Consensus         3 np~g~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~----~~~l~~~G~i~ll~--~~~~~s~~~~~~~~hg~gv~   75 (150)
T d1cjxa1           3 NPMGLMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSK----NVHLYRQGEINLIL--NNEPNSIASYFAAEHGPSVC   75 (150)
T ss_dssp             CTTCEEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSS----SEEEEEETTEEEEE--ECCSSSHHHHHHHHHSSEEE
T ss_pred             CCCccCCEEEEEEecCCHHHHHHHHHH-hCCEEEecccce----EEEEEecCcEEEEe--cCCCCCHhHhHHhhCCCceE
Confidence            467799999999999999999999987 999998764422    23445556644333  3332222111  13467899


Q ss_pred             EEEEEECCHHHHHHHHHhCCCeEEccC---CCccEEEEeCCCCCeEEEEee
Q 032856           83 HTCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        83 hi~~~v~d~~~~~~~l~~~g~~~~~~~---~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      |+||+|+|+++++++++++|++....+   .......+++|+|.++.|++.
T Consensus        76 hiaf~V~D~~~a~~~a~~~Ga~~i~~~~~~g~~~~~~i~g~gg~~i~Fv~~  126 (150)
T d1cjxa1          76 GMAFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDR  126 (150)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECC
T ss_pred             EEEEEeCCHHHHHHHHHHCCCEEcccCCCCCceeeeEEEcCCCCEEEEECc
Confidence            999999999999999999999876543   234456778888888888765

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.54  E-value=3.7e-14  Score=89.66  Aligned_cols=99  Identities=14%  Similarity=0.126  Sum_probs=68.5

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCC-----CCCCceeEEEEeC--CeEEEEEecCCCCCCCCCC---
Q 032856            6 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPH-----DKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRP---   75 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~-----~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~---   75 (132)
                      +..+++++||++.|+|++++..||+++|||+.......     +........+..+  ...+.+.+...+.......   
T Consensus         4 d~Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~~~~~~~~s~i~~F   83 (224)
T d1sp8a2           4 DYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTF   83 (224)
T ss_dssp             CCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHHH
T ss_pred             CCCcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeeecCCCCCccHHHHH
Confidence            46789999999999999999999999999987654321     2223333444443  3356666554443222111   


Q ss_pred             ---CCCCCceEEEEEECCHHHHHHHHHhCCCe
Q 032856           76 ---EHGGRDRHTCIAIRDVSKLKMILDKAGIS  104 (132)
Q Consensus        76 ---~~~~~~~hi~~~v~d~~~~~~~l~~~g~~  104 (132)
                         ..+.|+.||||.|+|+.++.++|+++|+.
T Consensus        84 L~~~~g~GiqHIAf~vdDI~~av~~L~arGv~  115 (224)
T d1sp8a2          84 LDHHGGPGVQHMALASDDVLRTLREMQARSAM  115 (224)
T ss_dssp             HHHHTSSEEEEEEEEETTHHHHHHHHHTSGGG
T ss_pred             HHhccCCCceeEEEEeCCHHHHHHHHHhcccc
Confidence               13468999999999999999999987643

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.51  E-value=2.6e-14  Score=89.21  Aligned_cols=99  Identities=13%  Similarity=0.080  Sum_probs=67.3

Q ss_pred             eeeeeeEEEEeC--CHHHHHHHHHhhcCCeeeccCCCC--CCCceeEEEEeCCe--EEEEEecCCCC-CCCCC---CCCC
Q 032856            9 VVSVHHVGILCE--NLERSLEFYQNILGLEINEARPHD--KLPYRGAWLWVGAE--MIHLMELPNPD-PLSGR---PEHG   78 (132)
Q Consensus         9 ~~~~~hv~i~v~--d~~~~~~fy~~~lg~~~~~~~~~~--~~~~~~~~~~~~~~--~~~l~~~~~~~-~~~~~---~~~~   78 (132)
                      +++++||++.|+  |++++..||+++|||+.....+..  ........+.....  .+.+....... +....   ...+
T Consensus         3 l~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~g   82 (203)
T d1cjxa2           3 LKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFNG   82 (203)
T ss_dssp             EEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHTS
T ss_pred             CCeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcCC
Confidence            689999999997  999999999999999987654322  22223333333322  33333222211 11111   1245


Q ss_pred             CCceEEEEEECCHHHHHHHHHhCCCeEEc
Q 032856           79 GRDRHTCIAIRDVSKLKMILDKAGISYTL  107 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~~g~~~~~  107 (132)
                      .|+.||||.|+|+.++.++|+++|+++..
T Consensus        83 ~GiqHIAf~vdDI~aav~~L~~~Gv~fL~  111 (203)
T d1cjxa2          83 EGIQHVAFLTDDLVKTWDALKKIGMRFMT  111 (203)
T ss_dssp             SBCCEEEEEESCHHHHHHHHHHTTCCBCC
T ss_pred             CCCceEEEEeCCHHHHHHHHHhcCCcccc
Confidence            78999999999999999999999998754

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.49  E-value=2.4e-13  Score=84.32  Aligned_cols=101  Identities=12%  Similarity=0.120  Sum_probs=67.7

Q ss_pred             eeeeeeeEEEEeC--CHHHHHHHHHhhcCCeeeccCCC-----CCCCceeEEEEeCCe--EEEEEecCCCC--CCCCC--
Q 032856            8 GVVSVHHVGILCE--NLERSLEFYQNILGLEINEARPH-----DKLPYRGAWLWVGAE--MIHLMELPNPD--PLSGR--   74 (132)
Q Consensus         8 ~~~~~~hv~i~v~--d~~~~~~fy~~~lg~~~~~~~~~-----~~~~~~~~~~~~~~~--~~~l~~~~~~~--~~~~~--   74 (132)
                      .+.+++||++.|+  +++.+..||+++|||+.......     +.......-+..++.  .+.+-......  +...+  
T Consensus         3 ~f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~~v~l~lne~~~~~~~s~i~~FL   82 (199)
T d1t47a2           3 TFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYL   82 (199)
T ss_dssp             SCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHH
T ss_pred             cceeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccccccceeecccCccccccchhhhh
Confidence            4679999999998  99999999999999998764321     222223332333332  33333222111  11011  


Q ss_pred             -CCCCCCceEEEEEECCHHHHHHHHHhCCCeEEcc
Q 032856           75 -PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS  108 (132)
Q Consensus        75 -~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~  108 (132)
                       ...+.|+.||||.|+|+.++.++|+++|+++...
T Consensus        83 ~~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~  117 (199)
T d1t47a2          83 EFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDT  117 (199)
T ss_dssp             HHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCC
T ss_pred             hhcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCC
Confidence             0235689999999999999999999999987543

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=1.8e-13  Score=85.51  Aligned_cols=102  Identities=14%  Similarity=0.089  Sum_probs=67.8

Q ss_pred             CceeeeeeeEEEEeCC--HHHHHHHHHhhcCCeeeccCCCC-----CCCceeEEEEeCCe--EEEEEecCCCCCCC--CC
Q 032856            6 DYGVVSVHHVGILCEN--LERSLEFYQNILGLEINEARPHD-----KLPYRGAWLWVGAE--MIHLMELPNPDPLS--GR   74 (132)
Q Consensus         6 ~~~~~~~~hv~i~v~d--~~~~~~fy~~~lg~~~~~~~~~~-----~~~~~~~~~~~~~~--~~~l~~~~~~~~~~--~~   74 (132)
                      ...+.+++||++.|.+  ++++..||+++|||+.....+..     ........+..++.  .+.+..........  ..
T Consensus        19 ~~gl~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~~i~~~lne~~~~~~~sqi~~   98 (210)
T d1sqia2          19 SCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKSQIQE   98 (210)
T ss_dssp             CCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTSCCEEEEEECC-----CHHHH
T ss_pred             CCCcceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCccccccccccCCCCcccHHHH
Confidence            3568899999999987  99999999999999987643321     22223333444333  44444332221110  11


Q ss_pred             ---CCCCCCceEEEEEECCHHHHHHHHHhCCCeEEc
Q 032856           75 ---PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL  107 (132)
Q Consensus        75 ---~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~  107 (132)
                         ...+.|+.||||.|+|+.++.++|+++|+++..
T Consensus        99 fl~~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~  134 (210)
T d1sqia2          99 YVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLA  134 (210)
T ss_dssp             HHHHHTSSEEEEEEEEESCHHHHHHHHHHHTCCBCC
T ss_pred             HHhhcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCC
Confidence               124678999999999999999999999998753

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.35  E-value=5.8e-11  Score=69.46  Aligned_cols=108  Identities=14%  Similarity=0.049  Sum_probs=71.4

Q ss_pred             EeC-CHHHHHHHHHhhcCCeeeccCCCCC------------CCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEE
Q 032856           18 LCE-NLERSLEFYQNILGLEINEARPHDK------------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   84 (132)
Q Consensus        18 ~v~-d~~~~~~fy~~~lg~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi   84 (132)
                      ..+ |.++|.+||+++||+++........            .....+.+.+++..+.+.......     +...+...++
T Consensus         9 ~f~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~~~~~d~~~~~-----~~~~~~~~~~   83 (137)
T d1u6la_           9 IFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHPAY-----PYEGIKGCSI   83 (137)
T ss_dssp             EESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECCTTS-----CCCCCCSEEE
T ss_pred             EECCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcCeEEEecccCCcc-----cccCCCcEEE
Confidence            344 9999999999999999865332111            112234567777655554322211     1122344678


Q ss_pred             EEEECCHHHH--HHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEee
Q 032856           85 CIAIRDVSKL--KMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        85 ~~~v~d~~~~--~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      ++.+++.+..  +.+..++|.++..+    +.|.+..+++||+|+.|+|...
T Consensus        84 ~l~~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~  135 (137)
T d1u6la_          84 SLNVDSKAEAERLFNALAEGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCE  135 (137)
T ss_dssp             EEECSSHHHHHHHHHHHHTTSEEEEEEEEETTEEEEEEEECTTSCEEEEEES
T ss_pred             EEEcCCHHHHHHHHhhcccCceeecCccccCCCcEEEEEECCCCCEEEEEec
Confidence            8988866644  66677789887643    4577889999999999999764

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.35  E-value=2.4e-12  Score=81.51  Aligned_cols=97  Identities=14%  Similarity=0.141  Sum_probs=65.1

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCC-----CCceeEEEEeC--CeEEEEEecCCCCCCCCC-----
Q 032856            7 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----LPYRGAWLWVG--AEMIHLMELPNPDPLSGR-----   74 (132)
Q Consensus         7 ~~~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~-----~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~-----   74 (132)
                      ..+.+++||++.|.|++++.+||.++||+..........     .......+..+  ...+.+.+...+.....+     
T Consensus        18 ~gl~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~g~v~~~l~E~~~~~~~~sqi~~FL   97 (230)
T d1sqda2          18 YGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYL   97 (230)
T ss_dssp             SSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHHHH
T ss_pred             CCcCccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCCcccceeEEeecCCCCCcchHHHHH
Confidence            458999999999999999999999999998876544222     11222223322  235555554433222111     


Q ss_pred             -CCCCCCceEEEEEECCHHHHHHHHHhCCC
Q 032856           75 -PEHGGRDRHTCIAIRDVSKLKMILDKAGI  103 (132)
Q Consensus        75 -~~~~~~~~hi~~~v~d~~~~~~~l~~~g~  103 (132)
                       ...+.|+.||||.|+|+.++.++|+++|.
T Consensus        98 ~~~~G~GiQHIAf~tdDI~aav~~LrarG~  127 (230)
T d1sqda2          98 EHNEGAGLQHLALMSEDIFRTLREMRKRSS  127 (230)
T ss_dssp             HHHTSCEEEEEEEEESCHHHHHHHHHHHGG
T ss_pred             hhccCCceeEEEEEeCCHHHHHHHHHHhhc
Confidence             12467899999999999999999998643

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.14  E-value=6.6e-09  Score=60.33  Aligned_cols=110  Identities=8%  Similarity=0.005  Sum_probs=70.2

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCCeeeccC-------CCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 032856           14 HVGILCENLERSLEFYQNILGLEINEAR-------PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   86 (132)
Q Consensus        14 hv~i~v~d~~~~~~fy~~~lg~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   86 (132)
                      ++.+.-.|.++|.+||+++||.+.....       +.+......+-+.+++..+.+........    .. .+...++++
T Consensus         9 yL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~~~~i~~~d~~~~~~----~~-~~~~~s~~l   83 (134)
T d1u7ia_           9 FLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVRHA----FD-FTPAFSFFV   83 (134)
T ss_dssp             EEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSCCS----CC-CCTTEEEEE
T ss_pred             EEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEECCEEEEEecCCCCCC----CC-CCCceEEEE
Confidence            4455556899999999999998653221       11222334566788887777765433211    11 122356888


Q ss_pred             EECCHHHH--HHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEE
Q 032856           87 AIRDVSKL--KMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  128 (132)
Q Consensus        87 ~v~d~~~~--~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~  128 (132)
                      .+++.++.  +.+..++|.++..+    +.+.+...++||.|+.|.|.
T Consensus        84 ~~~~~d~~~~~~~~l~~gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~  131 (134)
T d1u7ia_          84 DCESNAQIERLAEALSDGGKALMPLGDYGFSQRFAWLADRFGVSWQLN  131 (134)
T ss_dssp             ECCCHHHHHHHHHHHHTTSEEEEEEECCSSSSEEEEEECTTSCEEEEE
T ss_pred             EeccHHHHHHHHHHHhcCCEEecCcccccccceEEEEECCCCCEEEEE
Confidence            88876655  33334556666432    45778899999999999985

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.71  E-value=5.7e-07  Score=51.60  Aligned_cols=104  Identities=8%  Similarity=0.091  Sum_probs=64.6

Q ss_pred             EEEeC-CHHHHHHHHHhhcCCeee-ccC------CCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 032856           16 GILCE-NLERSLEFYQNILGLEIN-EAR------PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA   87 (132)
Q Consensus        16 ~i~v~-d~~~~~~fy~~~lg~~~~-~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   87 (132)
                      .|..+ |.++|.+||+++||-... ...      +.+......+-+.+++..+.+........         .-.++++.
T Consensus         9 yl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~g~~~~~~d~~~~~~---------~~~s~~v~   79 (129)
T d1tsja_           9 FLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDANSGTE---------LPISLFVT   79 (129)
T ss_dssp             EEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC----------------CCCEEEE
T ss_pred             EEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEECCEEEEeecCCCCCC---------CCEEEEec
Confidence            45555 999999999999965432 211      11223345566888887766654332211         11347888


Q ss_pred             ECCHHHH---HHHHHhCCCeEEcc----CCCccEEEEeCCCCCeEEEEe
Q 032856           88 IRDVSKL---KMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        88 v~d~~~~---~~~l~~~g~~~~~~----~~~~~~~~~~Dp~G~~iel~~  129 (132)
                      +++.+++   .++|.+ |.++..+    +.+.+...++||.|+.|.|..
T Consensus        80 ~~~~~e~~~~~~~L~~-gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~~  127 (129)
T d1tsja_          80 VKDTIEMERLFNGLKD-EGAILMPKTNMPPYREFAWVQDKFGVSFQLAL  127 (129)
T ss_dssp             CSSHHHHHHHHHHHHT-TCEEEEEEEEETTEEEEEEEECTTSCEEEEEE
T ss_pred             cCCHHHHHHHHHHhcc-CCEEecccccccccceEEEEECCCCCEEEEeC
Confidence            8877765   456654 5465432    456788899999999999864

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.05  E-value=0.00018  Score=42.15  Aligned_cols=99  Identities=10%  Similarity=-0.092  Sum_probs=59.7

Q ss_pred             EeCCHHHHHHHHHhhcCC-eeecc--C-----CCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEEC
Q 032856           18 LCENLERSLEFYQNILGL-EINEA--R-----PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR   89 (132)
Q Consensus        18 ~v~d~~~~~~fy~~~lg~-~~~~~--~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~   89 (132)
                      .-.|.++|.+||+++||- ++...  .     +......-.+.+.+++..+.....  ++.  ...   +.-.++++.++
T Consensus         9 F~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~g~~lm~sD~--~~~--~~~---~~~~sl~l~~d   81 (156)
T d1u69a_           9 YDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNG--GPA--FRH---SEAFSFQVATD   81 (156)
T ss_dssp             ESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEEC--CTT--CCC---CTTEEEEEEES
T ss_pred             ECCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEECCeEEEeecC--CCC--CCC---CCCeEEEEecC
Confidence            347999999999999964 33221  1     112223455567778765544332  211  111   22357888888


Q ss_pred             CHHHH---HHHHHhCCCeEEccCCCccEEEEeCCCCCeEEEEe
Q 032856           90 DVSKL---KMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  129 (132)
Q Consensus        90 d~~~~---~~~l~~~g~~~~~~~~~~~~~~~~Dp~G~~iel~~  129 (132)
                      |.+++   +++|.+.|- +.. +.    ..++|..|..|.|..
T Consensus        82 ~~eE~d~~f~~LsegG~-~~~-~~----G~v~DkFGV~Wqi~~  118 (156)
T d1u69a_          82 DQAETDRLWNAIVDNGG-EES-AC----GWCRDKWGISWQITP  118 (156)
T ss_dssp             SHHHHHHHHHHHHHTTC-EEC-ST----TEEECTTSCEEEEEE
T ss_pred             CHHHHHHHHHHHhccCC-CCC-CC----eEEECCCCCEEEeCh
Confidence            76654   677766663 222 22    269999999999874

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.89  E-value=0.0024  Score=37.24  Aligned_cols=59  Identities=15%  Similarity=0.078  Sum_probs=43.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEecCCCC
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPD   69 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~   69 (132)
                      .++.||+|.|.|++++.+...+ .|.+...+......+.+.+++.. |+..+.|++-....
T Consensus       103 ~G~~Hiaf~VdDi~aa~~~l~~-~G~~~~~~P~~~~~~~~~a~I~~~gd~~~~~v~r~~~~  162 (167)
T d1sqda1         103 LGVRAVAIEVEDAESAFSISVA-NGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKAED  162 (167)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHH-TTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEECCC-
T ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCEEecCCeecCCCEEEEEEEccCCcEEEEEecCCCc
Confidence            4899999999999999999988 69987765332333445555444 77788888776543

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=96.74  E-value=0.0026  Score=37.43  Aligned_cols=59  Identities=14%  Similarity=0.123  Sum_probs=44.9

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEecCCCC
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPD   69 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~   69 (132)
                      .++.||+|.|.|++++.+-+.+ .|.++.........+.+.++++. |+..+.|++..+..
T Consensus        98 ~Gi~Hiaf~VdDi~aa~~~l~~-~Ga~~~~~P~~~~~g~~~a~v~~~g~~~~~lve~~~~~  157 (172)
T d1sp8a1          98 LAVRAVALRVADAEDAFRASVA-AGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYPDGA  157 (172)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHT-TTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECCTTG
T ss_pred             CceEEEEEeeCcHHHHHHHHHH-CcCEeccCCccCCCCEEEEEEECCCCcEEEEEecCCCC
Confidence            4899999999999999999988 79988665333334456666665 77788898877653

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=96.72  E-value=0.0055  Score=32.92  Aligned_cols=50  Identities=20%  Similarity=0.294  Sum_probs=39.2

Q ss_pred             CceEEEEEECCHHHHHHHHHh-CCCeEEccCCCccEEEEeCCCCCeEEEEee
Q 032856           80 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      ++.|+.+.|+|+++..+.+.+ .|.+...... ....++.++++..+.+.+.
T Consensus         3 ~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~-~~~~~~~~~~~~~~~~~~~   53 (113)
T d1xqaa_           3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTRG-NAFAVMRDNDGFILTLMKG   53 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEET-TTEEEEECTTCCEEEEEEC
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCEEEEeec-Ccceeeeecceeeeeeeee
Confidence            578999999999999999887 7998765443 3456677777888877654

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=96.23  E-value=0.0089  Score=33.65  Aligned_cols=55  Identities=16%  Similarity=0.180  Sum_probs=38.1

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEe
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME   64 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~   64 (132)
                      ..++.|+.+.|.|++++.+.+++ .|.+..........+...+|++- ++..++|++
T Consensus        91 ~~g~~hi~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~e  146 (149)
T d1ss4a_          91 ALGYLRVMFTVEDIDEMVSRLTK-HGAELVGEVVQYENSYRLCYIRGVEGILIGLAE  146 (149)
T ss_dssp             SBEEEEEEEEESCHHHHHHHHHH-TTCEESSCCEEETTTEEEEEEECGGGCEEEEEE
T ss_pred             CcceeEEEEeechhHHHHHHHHH-CCCeEccCCeECCCCeEEEEEECCCCCEEEEEE
Confidence            45799999999999999999988 79887654332233344555544 344666655

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=95.63  E-value=0.026  Score=32.34  Aligned_cols=56  Identities=11%  Similarity=0.041  Sum_probs=38.4

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEecCC
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPN   67 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~   67 (132)
                      .+++||+|.|.|++++.+...+ +|.++....... .......++- |+..+.++...+
T Consensus        72 ~gv~hiaf~V~D~~~a~~~a~~-~Ga~~i~~~~~~-g~~~~~~i~g~gg~~i~Fv~~~~  128 (150)
T d1cjxa1          72 PSVCGMAFRVKDSQKAYNRALE-LGAQPIHIDTGP-MELNLPAIKGIGGAPLYLIDRFG  128 (150)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHH-TTCCBCCCCCCT-TCBCCCEEECGGGCEEEEECCCS
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-CCCEEcccCCCC-CceeeeEEEcCCCCEEEEECcCC
Confidence            4799999999999999999888 899887654322 2222233333 566677766433

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=95.44  E-value=0.019  Score=31.93  Aligned_cols=56  Identities=13%  Similarity=0.221  Sum_probs=38.3

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCC-CCCCceeEEEEe---CCeEEEEEec
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPH-DKLPYRGAWLWV---GAEMIHLMEL   65 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~-~~~~~~~~~~~~---~~~~~~l~~~   65 (132)
                      -.++.|+++.|.|++++.+-.++ .|.++...... ...+...+|+..   ++..++|++.
T Consensus        84 ~~g~~Hia~~v~di~~~~~~l~~-~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~  143 (145)
T d1jc4a_          84 RAGLHHMAWRVDDIDAVSATLRE-RGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQY  143 (145)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHH-HTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEEC
T ss_pred             CCcceEEEEecchHHHHHHHHHH-CCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEEC
Confidence            35799999999999999999988 69987653321 122334444432   4567777764

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=95.13  E-value=0.036  Score=30.32  Aligned_cols=48  Identities=15%  Similarity=0.150  Sum_probs=33.0

Q ss_pred             CceEEEEEECCHHHHHHHHHhCCCeEEccCCCccEEEEeCCCCCeEEE
Q 032856           80 RDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEF  127 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~Dp~G~~iel  127 (132)
                      .+.|+++.|.|+++..+..++.|..+.........+.+.-+++..+.+
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~Lg~~~~~~~~~~~~~~~~~~~~~~~~~   49 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRKMGVEIPAEADSAPHTEAVLDGGIRLAW   49 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTTCCCCTTGGGCSEEEEECGGGCEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHHhCCccccccccccceeeeccceeeeee
Confidence            478999999999999999998888765443222334444444555444

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=95.04  E-value=0.062  Score=30.78  Aligned_cols=52  Identities=12%  Similarity=0.103  Sum_probs=36.2

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEEcc-----CCCccEEEEeCCCCCeEEEEee
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS-----KSGRPAIFTRDPDANALEFTQV  130 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~-----~~~~~~~~~~Dp~G~~iel~~~  130 (132)
                      .++.|++|.|.|++++.+.+++ .|.+....     .......++....+..++|.+.
T Consensus         6 ~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~   63 (163)
T d1t47a1           6 KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSV   63 (163)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEE
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEecc
Confidence            5689999999999999999986 89986531     1223334444445566777653

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=94.59  E-value=0.062  Score=31.18  Aligned_cols=31  Identities=13%  Similarity=0.149  Sum_probs=27.2

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEEccC
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK  109 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~  109 (132)
                      .|+.||++.|.|+++..+.+++ .|.++....
T Consensus        11 ~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~   42 (170)
T d1zswa2          11 QGMGSVELTVRRLDKMASTLTEIFGYTEVSRN   42 (170)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEC
T ss_pred             CCeeeEEEEeCCHHHHHHHHHHHhCCEEEeec
Confidence            6789999999999999999998 799876544

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=94.57  E-value=0.092  Score=29.14  Aligned_cols=56  Identities=9%  Similarity=0.064  Sum_probs=33.7

Q ss_pred             eeeeeEEEEeCCHHH---HHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEecCCC
Q 032856           10 VSVHHVGILCENLER---SLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNP   68 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~---~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~   68 (132)
                      .+++|+++.|.|.+.   ..+...+ .|........  ..+....|+.- ++..++|+...+.
T Consensus        76 ~~~~Hiaf~v~~~~~l~~~~~~l~~-~gv~~~~~~~--~~~~~~~yf~DPdG~~iEl~~~~~~  135 (144)
T d1zswa1          76 NAITRIGLLVPSEDSLHYWKERFEK-FDVKHSEMTT--YANRPALQFEDAEGLRLVLLVSNGE  135 (144)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHHHHH-TTCEECCSEE--ETTEEEEEEECTTCCEEEEEECTTC
T ss_pred             CceeEEEEecCCchhHHHHhhhhhc-cceeeeCccc--cCCeEEEEEECCCCCEEEEEEeCCC
Confidence            358999999999544   4444444 5776544322  22334445544 5668898876543

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.33  E-value=0.08  Score=29.73  Aligned_cols=28  Identities=7%  Similarity=-0.049  Sum_probs=24.0

Q ss_pred             CCceEEEEEECCHHHHHHHHH-hCCCeEE
Q 032856           79 GRDRHTCIAIRDVSKLKMILD-KAGISYT  106 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~-~~g~~~~  106 (132)
                      .+++||+|.|.|++++.+.+. ..|.+..
T Consensus        10 ~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~   38 (149)
T d1sqia1          10 LHFHSVTFWVGNAKQAASFYCNKMGFEPL   38 (149)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEE
T ss_pred             eeEeEEEEEcCCHHHHHHHHhhccceEEE
Confidence            457899999999999999886 4799864

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=94.15  E-value=0.12  Score=28.40  Aligned_cols=31  Identities=16%  Similarity=0.143  Sum_probs=26.5

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEEccC
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK  109 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~  109 (132)
                      .++.|+++.|+|++++.+.+++ +|.++....
T Consensus         3 ~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~   34 (131)
T d1lgta1           3 RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTT   34 (131)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhhCCceeecC
Confidence            3578999999999999999998 699876544

>d1k4na_ d.32.1.5 (A:) Hypothetical protein YecM (EC4020) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YecM (EC4020)
domain: Hypothetical protein YecM (EC4020)
species: Escherichia coli [TaxId: 562]

Probab=93.52  E-value=0.37  Score=28.44  Aligned_cols=76  Identities=13%  Similarity=0.076  Sum_probs=48.5

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEE------EEeCCeEEEEEecCCCCCCCCCCCCCCCceE
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAW------LWVGAEMIHLMELPNPDPLSGRPEHGGRDRH   83 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~h   83 (132)
                      -.++||+++|++.+.|.+|-+..+.+-..-... .-.+-..+.      +..++..+.+++.+-+..  +.+. ..|.-|
T Consensus        42 ~~~DHialR~n~~~~A~~w~~~l~~~G~llSen-~INGRPI~l~~L~~Pl~~~~~~I~ciELP~P~~--k~Yp-~eGWEH  117 (190)
T d1k4na_          42 LTADHISLRCHQNATAERWRRGFEQCGELLSEN-MINGRPICLFKLHEPVQVAHWQFSIVELPWPGE--KRYP-HEGWEH  117 (190)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHTTTEEEEEEE-EETTEEEEEEEEEEEEEETTEEEEEEEEECCCS--SCCS-SCEEEE
T ss_pred             ccCcEEEEeeCCHHHHHHHHHHHHHhchhhhcC-eeCCeeEEEEEcCCCceeCCcEEEEEEeCCCCC--CCCC-CCCceE
Confidence            468999999999999999999988774432111 001112222      344666777777655432  2222 367899


Q ss_pred             EEEEEC
Q 032856           84 TCIAIR   89 (132)
Q Consensus        84 i~~~v~   89 (132)
                      |.+.++
T Consensus       118 IElVlp  123 (190)
T d1k4na_         118 IEIVLP  123 (190)
T ss_dssp             EEEECC
T ss_pred             EEEEec
Confidence            999998

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=92.58  E-value=0.19  Score=29.15  Aligned_cols=29  Identities=21%  Similarity=0.173  Sum_probs=25.1

Q ss_pred             CCceEEEEEECCHHHHHHHHHhCCCeEEc
Q 032856           79 GRDRHTCIAIRDVSKLKMILDKAGISYTL  107 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~~g~~~~~  107 (132)
                      .++.|+++.|.|+++..+..+.+|.++..
T Consensus         4 ~rl~Hv~l~v~Dle~s~~FYe~LGf~~~d   32 (176)
T d1f1ua2           4 VRLDHFNQVTPDVPRGRAYLEDLGFRVSE   32 (176)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCEEEE
T ss_pred             eEeeeEEEEcCCHHHHHHHHHHCCCEEEE
Confidence            35789999999999999988889998753

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=92.06  E-value=0.3  Score=29.72  Aligned_cols=52  Identities=13%  Similarity=0.179  Sum_probs=37.9

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEEc---------cCCCccEEEEeCCCCC-eEEEEee
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYTL---------SKSGRPAIFTRDPDAN-ALEFTQV  130 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~---------~~~~~~~~~~~Dp~G~-~iel~~~  130 (132)
                      ..+.||++.|+|++++.+.+++ .|.....         +..+.++..+..|+|. .+++.+.
T Consensus         8 ~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~   70 (224)
T d1sp8a2           8 SRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEP   70 (224)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEE
T ss_pred             CeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeee
Confidence            4578999999999999999988 7986532         1124577788899874 5666653

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.05  E-value=0.55  Score=26.73  Aligned_cols=57  Identities=14%  Similarity=0.186  Sum_probs=41.7

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEecCC
Q 032856            9 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPN   67 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~   67 (132)
                      ..++.|+++.+.|+++..+.+++ .|.+...... .......+|++- ++..++|++...
T Consensus       114 ~~g~~h~~~~~~d~~~~~~~l~~-~Gv~~~~~p~-~g~~~~~~f~~DPdG~~IElvq~~~  171 (176)
T d1qipa_         114 PRGFGHIGIAVPDVYSACKRFEE-LGVKFVKKPD-DGKMKGLAFIQDPDGYWIEILNPNK  171 (176)
T ss_dssp             SCBEEEEEEECSCHHHHHHHHHH-TTCEEEECTT-SSSSTTCEEEECTTCCEEEEECTTT
T ss_pred             ccceeEEEeeHHHHHHHHHHHHH-CCCEEeeCCc-cCCceEEEEEECCCCCEEEEEeCCC
Confidence            45899999999999999999987 6998876543 222334466654 567888887543

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=91.91  E-value=0.44  Score=25.99  Aligned_cols=31  Identities=26%  Similarity=0.231  Sum_probs=26.4

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEEccC
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK  109 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~  109 (132)
                      .++.||++.|+|++++.+.+.+ .|.+.....
T Consensus         3 ~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~   34 (132)
T d1kw3b1           3 ERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSA   34 (132)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             ccccEEEEEeCCHHHHHHHHHHHhCCceeccc
Confidence            4578999999999999999998 699876543

>d2g3aa1 d.108.1.1 (A:1-137) Probable acetyltransferase Atu2258 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase Atu2258
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=91.77  E-value=0.22  Score=27.65  Aligned_cols=35  Identities=14%  Similarity=-0.026  Sum_probs=25.5

Q ss_pred             eeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCC
Q 032856           11 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP   47 (132)
Q Consensus        11 ~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~   47 (132)
                      ++.++.+.+.|. .+..||++ +||+...+.+....+
T Consensus        93 g~~~i~l~~~n~-~a~~fY~k-~GF~~~g~~~~~~~~  127 (137)
T d2g3aa1          93 GCMGAYIDTMNP-DALRTYER-YGFTKIGSLGPLSSG  127 (137)
T ss_dssp             TCCEEEEEESCH-HHHHHHHH-HTCEEEEEECCCTTS
T ss_pred             CCceEEEecccH-hhHHHHHh-CCCEEEEEECCCCCC
Confidence            455677777775 47999999 899998876644333

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=90.76  E-value=0.49  Score=25.96  Aligned_cols=29  Identities=21%  Similarity=0.130  Sum_probs=24.9

Q ss_pred             CceEEEEEECCHHHHHHHHHh-CCCeEEcc
Q 032856           80 RDRHTCIAIRDVSKLKMILDK-AGISYTLS  108 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~  108 (132)
                      ++.||++.|+|+++..+.+.+ .|..+...
T Consensus         7 rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~   36 (145)
T d1mpya1           7 RPGHVQLRVLDMSKALEHYVELLGLIEMDR   36 (145)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred             EeeeEEEEeCCHHHHHHHHHHhhCCEEEEe
Confidence            367999999999999999986 89987654

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=90.26  E-value=0.54  Score=26.02  Aligned_cols=31  Identities=19%  Similarity=0.154  Sum_probs=26.3

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEEccC
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK  109 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~  109 (132)
                      .++.|+.+.|.|++++.+...+ .|.+.....
T Consensus        15 ~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~   46 (146)
T d1f1ua1          15 VRCAYMEIVVTDLAKSREFYVDVLGLHVTEED   46 (146)
T ss_dssp             EEEEEEEEEESCHHHHHHHHTTTTCCEEEEEC
T ss_pred             cEEeEEEEEeCCHHHHHHHHHhccCcEEEeec
Confidence            4578999999999999998886 899876543

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=89.89  E-value=0.19  Score=30.12  Aligned_cols=30  Identities=20%  Similarity=0.491  Sum_probs=25.8

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeecc
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEA   40 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~   40 (132)
                      .++.||++.|.|+.++.+..++ -|++....
T Consensus        83 ~GiqHIAf~vdDI~aav~~L~~-~Gv~fL~~  112 (203)
T d1cjxa2          83 EGIQHVAFLTDDLVKTWDALKK-IGMRFMTA  112 (203)
T ss_dssp             SBCCEEEEEESCHHHHHHHHHH-TTCCBCCC
T ss_pred             CCCceEEEEeCCHHHHHHHHHh-cCCccccC
Confidence            4799999999999999999988 58776653

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=89.58  E-value=0.5  Score=25.81  Aligned_cols=30  Identities=17%  Similarity=0.255  Sum_probs=26.0

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEEcc
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS  108 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~  108 (132)
                      .++.|+++.|.|++++.+..++ .|.++...
T Consensus         3 ~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~   33 (140)
T d1npba_           3 QSLNHLTLAVSDLQKSVTFWHELLGLTLHAR   33 (140)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHTTSCCEEEEE
T ss_pred             CcEeEEEEEeCCHHHHHHHHHHHhCCEEEEE
Confidence            4689999999999999999987 89987543

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.88  E-value=0.5  Score=25.59  Aligned_cols=30  Identities=13%  Similarity=0.153  Sum_probs=25.4

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEEcc
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS  108 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~  108 (132)
                      .++.||+|.|.|++++.+.+++ .|.++...
T Consensus         3 ~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~   33 (134)
T d1nkia_           3 TGLNHLTLAVADLPASIAFYRDLLGFRLEAR   33 (134)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred             CcEeEEEEEeCCHHHHHHHHHHhhCCeEEEe
Confidence            3589999999999999999987 78887543

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=88.58  E-value=0.96  Score=24.11  Aligned_cols=27  Identities=19%  Similarity=0.273  Sum_probs=23.5

Q ss_pred             CceEEEEEECCHHHHHHHHHh-CCCeEE
Q 032856           80 RDRHTCIAIRDVSKLKMILDK-AGISYT  106 (132)
Q Consensus        80 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~  106 (132)
                      ++.|+++.|.|+++..+.+.+ .|.++.
T Consensus         4 ~i~Hi~l~v~d~~~s~~FY~~~lG~~~~   31 (130)
T d1r9ca_           4 GLSHMTFIVRDLERMTRILEGVFDAREV   31 (130)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEE
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhcCCEEE
Confidence            589999999999999988886 788765

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=88.47  E-value=0.75  Score=24.24  Aligned_cols=51  Identities=8%  Similarity=0.132  Sum_probs=32.7

Q ss_pred             eeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEEEe
Q 032856           13 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME   64 (132)
Q Consensus        13 ~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~   64 (132)
                      .++.+.|.|++++.+-+.+ .|.+..........+.+.+++.- ++..+++.+
T Consensus        62 ~~~~f~v~D~d~~~~~l~~-~G~~i~~~~~~~~~g~~~~~~~DPdGn~ie~~~  113 (115)
T d2i7ra1          62 IIIHIEVEDVDQNYKRLNE-LGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYR  113 (115)
T ss_dssp             EEEEEECSCHHHHHHHHHH-HTCCEEEEEEECTTSCEEEEEECGGGCEEEEEE
T ss_pred             eEEEEEECCHHHHHHHHHh-hccccccceEEeeCCeEEEEEECCCCCEEEEEE
Confidence            4688999999999999888 68876654222222334444444 344666654

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=88.37  E-value=0.37  Score=25.79  Aligned_cols=28  Identities=21%  Similarity=0.281  Sum_probs=24.6

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEE
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYT  106 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~  106 (132)
                      ..+.|+++.|.|+++..+.+.+ .|.++.
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~   30 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVL   30 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEE
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEee
Confidence            3578999999999999999997 898874

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=87.86  E-value=0.83  Score=23.48  Aligned_cols=52  Identities=15%  Similarity=0.180  Sum_probs=32.1

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEe-CCeEEEE
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHL   62 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l   62 (132)
                      ....|+.+.|.|+++..+-.++ .|.+..........+....++.- ++..+++
T Consensus        58 ~~~~~~~~~~~dvd~~~~~l~~-~g~~~~~~p~~~~~g~~~~~~~DP~Gn~iei  110 (111)
T d2pjsa1          58 TDVPDLSIEVDNFDEVHARILK-AGLPIEYGPVTEAWGVQRLFLRDPFGKLINI  110 (111)
T ss_dssp             BCCCSEEEEESCHHHHHHHHHH-TTCCCSEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred             CceeEEEEEecCHHHHHHHHHh-hccccccCCeEcCCCcEEEEEECCCCCEEEe
Confidence            4557899999999999988877 68876553322222333444443 3344444

>d1y9wa1 d.108.1.1 (A:1-140) Probable acetyltransferase BC2806 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase BC2806
species: Bacillus cereus [TaxId: 1396]

Probab=87.85  E-value=0.28  Score=27.13  Aligned_cols=32  Identities=13%  Similarity=0.161  Sum_probs=23.5

Q ss_pred             eeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCC
Q 032856           11 SVHHVGILCENLERSLEFYQNILGLEINEARPHD   44 (132)
Q Consensus        11 ~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~   44 (132)
                      +...+.+.+.|. .|..||.+ +||+...+.+..
T Consensus        96 g~~~i~l~~~n~-~A~~fY~k-~GF~~~g~~~~~  127 (140)
T d1y9wa1          96 GCRLILLDSFSF-QAPEFYKK-HGYREYGVVEDH  127 (140)
T ss_dssp             TCCEEEEEEEGG-GCHHHHHH-TTCEEEEEESSC
T ss_pred             cceEEEEeechh-hHHHHHHh-CCCEEEEEECCC
Confidence            455666777764 58999998 899998765533

>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: BT0572-like
domain: Hypothetical protein BT0572
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=87.48  E-value=0.58  Score=22.86  Aligned_cols=26  Identities=12%  Similarity=0.149  Sum_probs=23.0

Q ss_pred             eEEEEEECCHHHHHHHHHhCCCeEEc
Q 032856           82 RHTCIAIRDVSKLKMILDKAGISYTL  107 (132)
Q Consensus        82 ~hi~~~v~d~~~~~~~l~~~g~~~~~  107 (132)
                      .-+.|.|+|.+.+.+.|+++|+++..
T Consensus        39 ~~~vl~vdd~~~a~~~L~~~G~~vl~   64 (71)
T d2f06a1          39 ANVVIRPSNMDKCIEVLKEKKVDLLA   64 (71)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCEEEC
T ss_pred             EEEEEEECCHHHHHHHHHHCCCEEEc
Confidence            34899999999999999999998754

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=87.21  E-value=0.35  Score=29.54  Aligned_cols=87  Identities=14%  Similarity=0.159  Sum_probs=52.6

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhh---cCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 032856           10 VSVHHVGILCENLERSLEFYQNI---LGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   86 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~---lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   86 (132)
                      .+++||++.|.|+.++.+-.++.   -|++.....+      ..+|-.+..                             
T Consensus       103 ~GiQHIAf~tdDI~aav~~LrarG~~~G~~f~~~~p------~~YY~~l~~-----------------------------  147 (230)
T d1sqda2         103 AGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSPP------PTYYQNLKK-----------------------------  147 (230)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCCC------HHHHHHHHH-----------------------------
T ss_pred             CceeEEEEEeCCHHHHHHHHHHhhcccCcccccCCc------hHHHHHHHH-----------------------------
Confidence            38999999999999999999873   2443322111      000000000                             


Q ss_pred             EEC--CHHHHHHHHHhCCCeEEccCCCccEEEEeCC----CCCeEEEEeeC
Q 032856           87 AIR--DVSKLKMILDKAGISYTLSKSGRPAIFTRDP----DANALEFTQVD  131 (132)
Q Consensus        87 ~v~--d~~~~~~~l~~~g~~~~~~~~~~~~~~~~Dp----~G~~iel~~~~  131 (132)
                      +.+  -.++..++|+++++-+.....|.-.-.|+.|    .+.-+||+|+.
T Consensus       148 r~~~~l~~~~~~~l~~~~IL~D~d~~g~llqifT~~~~~~~t~FfEiIqR~  198 (230)
T d1sqda2         148 RVGDVLSDDQIKECEELGILVDRDDQGTLLQIFTKPLGDRPTIFIEIIQRV  198 (230)
T ss_dssp             HHTTTSCHHHHHHHHHHTCEEEECSSEEEEEEEBCCSSSSSCCEEEEEEEE
T ss_pred             HhccccchHhHHHHHHcCCcccCCCCCeEEEEeccccCCCCCcEEEEEEec
Confidence            001  1256678899999988776655433344554    25888999873

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=87.15  E-value=0.47  Score=26.79  Aligned_cols=29  Identities=14%  Similarity=0.142  Sum_probs=25.4

Q ss_pred             CCCceEEEEEECCHHHHHHHHHh-CCCeEE
Q 032856           78 GGRDRHTCIAIRDVSKLKMILDK-AGISYT  106 (132)
Q Consensus        78 ~~~~~hi~~~v~d~~~~~~~l~~-~g~~~~  106 (132)
                      ..|+.|+++.|.|+++..+-+++ +|.++.
T Consensus         8 ~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~   37 (156)
T d1kw3b2           8 DQGIGHFVRCVPDTAKAMAFYTEVLGFVLS   37 (156)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHHTTCCEEE
T ss_pred             CCCcceEEEecCCHHHHHHHHHHhcCceee
Confidence            36789999999999999998886 899864

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.99  E-value=0.38  Score=28.97  Aligned_cols=29  Identities=17%  Similarity=0.418  Sum_probs=25.1

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeec
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINE   39 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~   39 (132)
                      .++.||++.|+|+.++.+.+++ -|.+...
T Consensus       106 ~GiQHIAf~t~DI~~av~~L~~-~Gv~fL~  134 (210)
T d1sqia2         106 AGVQHIALRTEDIITTIRHLRE-RGMEFLA  134 (210)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHH-HTCCBCC
T ss_pred             CCeeEEEEEcCCHHHHHHHHHH-cCCCCCC
Confidence            3799999999999999999988 4777664

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=85.80  E-value=0.59  Score=25.47  Aligned_cols=56  Identities=11%  Similarity=-0.046  Sum_probs=34.4

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHhhc--CCeeeccCCCCCCCceeEEEEe-CCeEEEEEec
Q 032856            9 VVSVHHVGILCENLERSLEFYQNIL--GLEINEARPHDKLPYRGAWLWV-GAEMIHLMEL   65 (132)
Q Consensus         9 ~~~~~hv~i~v~d~~~~~~fy~~~l--g~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~   65 (132)
                      ..+.+|+++.|.|.+...+++..+.  |.+...... +..+...+++.- ++.+++|+..
T Consensus        73 ~~~~~hlaf~v~~~~dv~~~~~~l~~~G~~~~~~~~-~~~~~~~~~f~DPDG~~Iel~~~  131 (137)
T d1twua_          73 PHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESEN-PYWSNGGVTIEDPDGWRIVFMNS  131 (137)
T ss_dssp             CCTTCEEEEECCCHHHHHHHHHHHHHTTCCEECCSS-HHHHSSEEEEECTTCCEEEEESS
T ss_pred             cccCceEEEEeCCHHHHHHHHHHHHHCCCeEeCCCC-CCCCceEEEEECCCCCEEEEEcC
Confidence            3457899999999777777776644  666554322 111223455554 5567888744

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=85.60  E-value=0.53  Score=28.03  Aligned_cols=85  Identities=13%  Similarity=0.130  Sum_probs=55.1

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHhhcCCeeeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEEC
Q 032856           10 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR   89 (132)
Q Consensus        10 ~~~~hv~i~v~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~   89 (132)
                      .++.||++.|.|+.++.+-.++ -|++............       . .+                        +.    
T Consensus        88 ~GiQHIAl~tdDI~~av~~L~~-~G~~fL~~p~~YY~~l-------~-~r------------------------~~----  130 (199)
T d1t47a2          88 AGVQHIALNTGDIVETVRTMRA-AGVQFLDTPDSYYDTL-------G-EW------------------------VG----  130 (199)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHH-TTCCBCCCCGGGTTSH-------H-HH------------------------HC----
T ss_pred             CcceEEEEEcCCHHHHHHHHHH-cCCCCCCCChHHHHHH-------H-HH------------------------hc----
Confidence            4899999999999999999988 5777665432111100       0 00                        00    


Q ss_pred             CHHHHHHHHHhCCCeEEccCCCccEEEEeCC-C---CCeEEEEeeC
Q 032856           90 DVSKLKMILDKAGISYTLSKSGRPAIFTRDP-D---ANALEFTQVD  131 (132)
Q Consensus        90 d~~~~~~~l~~~g~~~~~~~~~~~~~~~~Dp-~---G~~iel~~~~  131 (132)
                      ......++|+++|+-+.....|...-.|+.| .   +.-|||+|+.
T Consensus       131 ~~~~~~~~l~~~~IL~D~d~~g~llqift~~~~~~~~~FfEiiqR~  176 (199)
T d1t47a2         131 DTRVPVDTLRELKILADRDEDGYLLQIFTKPVQDRPTVFFEIIERH  176 (199)
T ss_dssp             CCSSCHHHHHHHTCEEEECSSCEEEEEEBCCSSSSSCCEEEEEEEE
T ss_pred             ccccCHHHHHhcCeEEecCCCCeEEEEEecccCCCCceeEEEEEEc
Confidence            0012356789999988877766544455665 3   5789999874

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=81.78  E-value=2.8  Score=23.34  Aligned_cols=28  Identities=14%  Similarity=0.102  Sum_probs=24.3

Q ss_pred             CCceEEEEEECCHHHHHHHHHh-CCCeEE
Q 032856           79 GRDRHTCIAIRDVSKLKMILDK-AGISYT  106 (132)
Q Consensus        79 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~  106 (132)
                      -++.|+++.|.|+++..+.+.+ +|.++.
T Consensus         4 ~rldHv~l~v~Dle~s~~FY~~vLG~~~~   32 (162)
T d1mpya2           4 VRFDHALMYGDELPATYDLFTKVLGFYLA   32 (162)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred             ccccEEEEECCCHHHHHHHHHHccCCEEE
Confidence            3478999999999999999887 898764