Citrus Sinensis ID: 032956

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Protein Sequence
MRIQMKILMMACLVLCLISTAYAAQGNAVYYDPPYTKSACYQNQDHGTMVTGVSDALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIADTVAGKVQVEYNPV
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccccccccEEEEEccccccccccccccEEEEEcccccccccccccccEEEEEEEccccccccccEEccHHHHHHHHcccccEEEEEEEEc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHccccccEEEEcccccccccccccccccEEEEEcccHcccccccccEEEEEEEccccccccccccccEEEEEEEEcccccccccccccHHHHHHHHcccccEEEEEEEEc
Coil and Loop (DISEMBL)
MRIQMKILMMACLVLCLISTAYaaqgnavyydppytksacyqnqdhgtmvtGVSDALwdggracgrrykvqcvrgantaphpchdgasVEVEVVDYcrqpcngvlnlSKDAFAVIADTVAGKVQVEYNPV
Flexible Loop (DISEMBL)
MRIQMKILMMACLVLCLISTAYAAQGNAVYYDPPYTKSACYQNQDHGTMVTGVSDALWDGGRACGRRYKVQCVRGantaphpchdgASVEVEVVDYCRQPCNGVLNLSKDAFAVIADTvagkvqveynpv
Low Complexity Region (SEG)
MRIQMKILMMACLVLCLISTAYAAQGNAVYYDPPYTKSACYQNQDHGTMVTGVSDALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIADTVAGKVQVEYNPV
Disordered region (IsUnstruct)
****MKILMMACLVLCLISTAYAAQGNAVYYDPPYTKSACYQNQDHGTMVTGVSDALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIADTVAGKVQV*****
Disordered Region (DISOPRED)
****MKILMMACLVLCLISTAYAAQGNAVYYDPPYTKSACYQNQDHGTMVTGVSDALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIADTVAGKVQVEYNPV
Disordered Region (DISEMBL)
MRIQMKILMMACLVLCLISTAYAAQGNAVYYDPPYTKSACYQNQDHGTMVTGVSDALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIADTVAGKVQVEYNPV
Disordered Region (DISPRO)
*RIQMKILMMACLVLCLISTAYAAQGNAVYYDPPYTKSACYQNQDHGTMVTGVSDALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIADTVAGKVQVEYNPV
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRIQMKILMMACLVLCLISTAYAAQGNAVYYDPPYTKSACYQNQDHGTMVTGVSDALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIADTVAGKVQVEYNPV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	130	2.2.26 [Sep-21-2011]
Q9ZV52	130	EG45-like domain containi	yes	no	0.938	0.938	0.532	9e-32
Q9ZP41	131	EG45-like domain containi	N/A	no	0.976	0.969	0.4	7e-25
Q9M0C2	123	Putative EG45-like domain	no	no	0.946	1.0	0.385	1e-22

>sp|Q9ZV52|EGC2_ARATH EG45-like domain containing protein 2 OS=Arabidopsis thaliana GN=EGC2 PE=2 SV=2

 Score =  135 bits (339), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 66/124 (53%), Positives = 85/124 (68%), Gaps = 2/124 (1%)

Query: 7   ILMMACLVLCLISTAYAAQGNAVYYDPPYTKSACYQNQDHGTMVTGVSDALWDGGRACGR 66
           +++M      L   A AAQG AVYYDPPYT+SACY  Q   T+V GV + LW  GRACGR
Sbjct: 9   VVVMIVFAQILAPIAEAAQGKAVYYDPPYTRSACYGTQRE-TLVVGVKNNLWQNGRACGR 67

Query: 67  RYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIADTVAGKVQVE 126
           RY+V+C+         C  G +V+V+VVD+CR+PCNG LNLS+DAF VIA+T AG ++V 
Sbjct: 68  RYRVRCIGATYNFDRACT-GRTVDVKVVDFCREPCNGDLNLSRDAFRVIANTDAGNIRVV 126

Query: 127 YNPV 130
           Y P+
Sbjct: 127 YTPI 130

Plays a systemic role in water and solute homeostasis.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZP41|EGC_CITJA EG45-like domain containing protein OS=Citrus jambhiri GN=CjBAp12 PE=1 SV=1

 Score =  112 bits (280), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 52/130 (40%), Positives = 83/130 (63%), Gaps = 3/130 (2%)

Query: 1   MRIQMKILMMACLVLCLISTA-YAAQGNAVYYDPPYTKSACYQNQDHGTMVTGVSDALWD 59
           M +  K+L++  + +CLIS+A YA++G A +Y PPY  SAC   ++ G M+   S A+W+
Sbjct: 1   MGVGTKVLVITTMAICLISSAAYASEGTATFYTPPYVPSACNGYKNDGVMIAAASYAIWN 60

Query: 60  GGRACGRRYKVQCVRGANTA-PHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIADT 118
            G  C + ++V+C    N   PHPC  G SV V++VD C   C   ++LS++AF+ IA+ 
Sbjct: 61  NGAVCNKSFRVKCTGATNQGTPHPCR-GGSVLVKIVDLCPAGCQATIDLSQEAFSQIANP 119

Query: 119 VAGKVQVEYN 128
            AGK+++E+N
Sbjct: 120 DAGKIKIEFN 129

Might have a systemic role in water and solute homeostasis. Has no expansin-like activity.

Citrus jambhiri (taxid: 64884)

>sp|Q9M0C2|EGC1_ARATH Putative EG45-like domain containing protein 1 OS=Arabidopsis thaliana GN=EGC1 PE=3 SV=1

 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 75/127 (59%), Gaps = 4/127 (3%)

Query: 3   IQMKILMMACLVLCLISTAYAAQGNAVYYDPPYTKSACYQNQDHGTMVTGVSDALWDGGR 62
           +   I+  + +++ L S +YA  G A +Y    + + CY+    G M+   SD LWD GR
Sbjct: 1   MSKSIVFFSTVLVFLFSFSYATPGIATFYT---SYTPCYRGTQEGVMIAAASDTLWDNGR 57

Query: 63  ACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIADTVAGK 122
            CG+ + V+C    N  PHPC  G SV+V++VD+C   C   L+LS++AFA IA+ VAG 
Sbjct: 58  VCGKMFTVKCSGPRNAVPHPC-TGKSVKVKIVDHCPSGCASTLDLSREAFAQIANPVAGI 116

Query: 123 VQVEYNP 129
           + ++Y P
Sbjct: 117 INIDYFP 123

Might have a systemic role in water and solute homeostasis.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	130
224091853	130	predicted protein [Populus trichocarpa]	0.946	0.946	0.653	3e-40
224143882	129	predicted protein [Populus trichocarpa]	0.923	0.930	0.636	7e-37
30680435	130	EG45-like domain-containing protein 2 [A	0.938	0.938	0.532	6e-30
4185132	126	hypothetical protein [Arabidopsis thalia	0.930	0.960	0.536	2e-29
20338421	126	immuno-reactant natriuretic peptide-like	0.930	0.960	0.528	3e-29
297836614	129	hypothetical protein ARALYDRAFT_319814 [	0.853	0.860	0.575	3e-28
29570348	104	immuno-reactant natriuretic peptide-like	0.8	1.0	0.584	2e-27
226494427	132	blight-associated protein p12 precursor	0.953	0.939	0.484	2e-26
413943285	132	blight-associated protein p12 [Zea mays]	0.861	0.848	0.526	2e-26
226530339	133	blight-associated protein p12 precursor	0.861	0.842	0.526	2e-26

>gi|224091853|ref|XP_002309373.1| predicted protein [Populus trichocarpa] gi|222855349|gb|EEE92896.1| predicted protein [Populus trichocarpa]

 Score =  169 bits (428), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 81/124 (65%), Positives = 98/124 (79%), Gaps = 1/124 (0%)

Query: 7   ILMMACLVLCLISTAYAAQGNAVYYDPPYTKSACYQNQDHGTMVTGVSDALWDGGRACGR 66
           + +M  +V CLIS A+AAQGNAV+YDPPYT S CY N++ G MV GVSDALW+GG ACGR
Sbjct: 8   VFIMVGIVSCLISVAHAAQGNAVFYDPPYTPSKCYGNRNDGVMVAGVSDALWNGGAACGR 67

Query: 67  RYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIADTVAGKVQVE 126
           +Y+V C+RGAN AP PC  G SV V VVDYCR+ CNGV+NLSKDAF+ IAD  AGKV ++
Sbjct: 68  KYRVSCIRGANEAPKPCKQG-SVVVTVVDYCRRGCNGVINLSKDAFSRIADPNAGKVVIQ 126

Query: 127 YNPV 130
           Y+ V
Sbjct: 127 YDQV 130

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224143882|ref|XP_002325108.1| predicted protein [Populus trichocarpa] gi|222866542|gb|EEF03673.1| predicted protein [Populus trichocarpa]

 Score =  158 bits (399), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 77/121 (63%), Positives = 94/121 (77%), Gaps = 1/121 (0%)

Query: 8   LMMACLVLCLISTAYAAQGNAVYYDPPYTKSACYQNQDHGTMVTGVSDALWDGGRACGRR 67
           L+M  +V CL+S A AA+G AV+Y PPYT S CY N+++G MV GVSDALW+GG ACGR+
Sbjct: 9   LIMVGIVSCLLSVADAAEGIAVFYKPPYTPSKCYGNRNNGVMVAGVSDALWNGGAACGRK 68

Query: 68  YKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIADTVAGKVQVEY 127
           Y+V CVRGAN AP PC  G SV V VVD+CR+ CNGV+NLS+DAF+ IAD  AGKV V Y
Sbjct: 69  YRVSCVRGANQAPRPCRKG-SVVVTVVDFCRKGCNGVINLSQDAFSRIADPDAGKVVVRY 127

Query: 128 N 128
           +
Sbjct: 128 D 128

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30680435|ref|NP_849979.1| EG45-like domain-containing protein 2 [Arabidopsis thaliana] gi|20138450|sp|Q9ZV52.2|EGC2_ARATH RecName: Full=EG45-like domain containing protein 2; AltName: Full=Plant natriuretic peptide A; Short=AtEXPR3; Short=AtPNP-A; Short=Ath-ExpGamma-1.2; Flags: Precursor gi|17529070|gb|AAL38745.1| unknown protein [Arabidopsis thaliana] gi|23296798|gb|AAN13172.1| unknown protein [Arabidopsis thaliana] gi|330251696|gb|AEC06790.1| EG45-like domain-containing protein 2 [Arabidopsis thaliana]

 Score =  135 bits (339), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 66/124 (53%), Positives = 85/124 (68%), Gaps = 2/124 (1%)

Query: 7   ILMMACLVLCLISTAYAAQGNAVYYDPPYTKSACYQNQDHGTMVTGVSDALWDGGRACGR 66
           +++M      L   A AAQG AVYYDPPYT+SACY  Q   T+V GV + LW  GRACGR
Sbjct: 9   VVVMIVFAQILAPIAEAAQGKAVYYDPPYTRSACYGTQRE-TLVVGVKNNLWQNGRACGR 67

Query: 67  RYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIADTVAGKVQVE 126
           RY+V+C+         C  G +V+V+VVD+CR+PCNG LNLS+DAF VIA+T AG ++V 
Sbjct: 68  RYRVRCIGATYNFDRACT-GRTVDVKVVDFCREPCNGDLNLSRDAFRVIANTDAGNIRVV 126

Query: 127 YNPV 130
           Y P+
Sbjct: 127 YTPI 130

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4185132|gb|AAD08935.1| hypothetical protein [Arabidopsis thaliana]

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/123 (53%), Positives = 84/123 (68%), Gaps = 2/123 (1%)

Query: 7   ILMMACLVLCLISTAYAAQGNAVYYDPPYTKSACYQNQDHGTMVTGVSDALWDGGRACGR 66
           +++M      L   A AAQG AVYYDPPYT+SACY  Q   T+V GV + LW  GRACGR
Sbjct: 6   VVVMIVFAQILAPIAEAAQGKAVYYDPPYTRSACYGTQRE-TLVVGVKNNLWQNGRACGR 64

Query: 67  RYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIADTVAGKVQVE 126
           RY+V+C+         C  G +V+V+VVD+CR+PCNG LNLS+DAF VIA+T AG ++V 
Sbjct: 65  RYRVRCIGATYNFDRACT-GRTVDVKVVDFCREPCNGDLNLSRDAFRVIANTDAGNIRVV 123

Query: 127 YNP 129
           Y P
Sbjct: 124 YTP 126

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|20338421|gb|AAM18791.1| immuno-reactant natriuretic peptide-like protein [Erucastrum strigosum]

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 65/123 (52%), Positives = 84/123 (68%), Gaps = 2/123 (1%)

Query: 7   ILMMACLVLCLISTAYAAQGNAVYYDPPYTKSACYQNQDHGTMVTGVSDALWDGGRACGR 66
           +++M      L   A AAQG AVYYDPPYT+SACY  Q   T+V GV + LW  GRACGR
Sbjct: 6   VVVMIVFAQILAPIAEAAQGKAVYYDPPYTRSACYGTQRE-TLVVGVKNNLWQNGRACGR 64

Query: 67  RYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIADTVAGKVQVE 126
           RY+V+C+         C  G +V+V+VVD+CR+PCNG LNLS+DAF V+A+T AG ++V 
Sbjct: 65  RYRVRCIGATYNFDRACT-GRTVDVKVVDFCREPCNGDLNLSRDAFRVVANTDAGNIRVV 123

Query: 127 YNP 129
           Y P
Sbjct: 124 YTP 126

Source: Erucastrum strigosum

Species: Erucastrum strigosum

Genus: Erucastrum

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297836614|ref|XP_002886189.1| hypothetical protein ARALYDRAFT_319814 [Arabidopsis lyrata subsp. lyrata] gi|297332029|gb|EFH62448.1| hypothetical protein ARALYDRAFT_319814 [Arabidopsis lyrata subsp. lyrata]

 Score =  129 bits (324), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/113 (57%), Positives = 79/113 (69%), Gaps = 2/113 (1%)

Query: 17  LISTAYAAQGNAVYYDPPYTKSACYQNQDHGTMVTGVSDALWDGGRACGRRYKVQCVRGA 76
           L   A AA G AVYYDPPYT+SACY  Q   TMV GV + LW  GRACGRRY+V+C+   
Sbjct: 19  LAPIAEAALGKAVYYDPPYTRSACYGTQRE-TMVVGVKNNLWQNGRACGRRYRVRCIGAT 77

Query: 77  NTAPHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIADTVAGKVQVEYNP 129
              P  C  G +V+V+VVD+CR+PCNG LNLS+DAF VIA+  AG ++V Y P
Sbjct: 78  YNFPGACT-GRTVDVKVVDFCREPCNGDLNLSRDAFRVIANIDAGNIRVVYTP 129

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|29570348|gb|AAO85279.1| immuno-reactant natriuretic peptide-like protein precursor [Hedera helix]

 Score =  127 bits (319), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 62/106 (58%), Positives = 77/106 (72%), Gaps = 2/106 (1%)

Query: 24  AQGNAVYYDPPYTKSACYQNQDHGTMVTGVSDALWDGGRACGRRYKVQCVRGANTAPHPC 83
           AQG AVYYDPPYT+SACY  Q   T+V GV + LW  GRACGRRY+V+C+         C
Sbjct: 1   AQGKAVYYDPPYTRSACYGTQRE-TLVVGVKNNLWQNGRACGRRYRVRCIGATYNFDRAC 59

Query: 84  HDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIADTVAGKVQVEYNP 129
             G +V+V+VVD+CR+PCNG LNLS+DAF VIA+T AG ++V Y P
Sbjct: 60  T-GRTVDVKVVDFCREPCNGDLNLSRDAFRVIANTDAGNIRVVYTP 104

Source: Hedera helix

Species: Hedera helix

Genus: Hedera

Family: Araliaceae

Order: Apiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226494427|ref|NP_001148968.1| blight-associated protein p12 precursor [Zea mays] gi|195623680|gb|ACG33670.1| blight-associated protein p12 precursor [Zea mays]

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 61/126 (48%), Positives = 77/126 (61%), Gaps = 2/126 (1%)

Query: 6   KILMMACLVLCLISTAYAAQGNAVYYDPPYTKSACYQNQDHGTMVTGVSDALWDGGRACG 65
            I++   L L ++S      G A +Y P YT SACY  QD GTM+   SD  W+GG ACG
Sbjct: 8   SIVLAMVLTLAMVSLVAGTTGYATFYTPSYTPSACYGYQDMGTMIAAASDVFWNGGAACG 67

Query: 66  RRYKVQCVRGANTA-PHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIADTVAGKVQ 124
            RY V C  G N   PHPC  G SV V++VD C   C G ++LS+DAFA+IAD  AGKV+
Sbjct: 68  DRYVVSCKGGTNEGVPHPCT-GRSVTVQIVDLCPAGCQGTIDLSQDAFAIIADPDAGKVE 126

Query: 125 VEYNPV 130
           +EY  +
Sbjct: 127 IEYRRI 132

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413943285|gb|AFW75934.1| blight-associated protein p12 [Zea mays]

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 60/114 (52%), Positives = 77/114 (67%), Gaps = 2/114 (1%)

Query: 16  CLISTAYAAQGNAVYYDPPYTKSACYQNQDHGTMVTGVSDALWDGGRACGRRYKVQCVRG 75
           CL+S + A QG A YY   YT SACY NQD GT++   SDALW+GG ACG  Y V CV G
Sbjct: 18  CLVSASLADQGTATYYTV-YTPSACYGNQDEGTLIAAASDALWNGGAACGTMYTVTCVGG 76

Query: 76  ANTAPHPCHDGASVEVEVVDYCRQP-CNGVLNLSKDAFAVIADTVAGKVQVEYN 128
            N  P+PC+ GASV V++VD C  P C   L+LS+ AFA+I +  AGK+ ++Y+
Sbjct: 77  TNETPNPCNPGASVTVKIVDRCPSPGCQATLDLSQQAFAIIGNLGAGKIVIDYS 130

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226530339|ref|NP_001148288.1| blight-associated protein p12 precursor [Zea mays] gi|195617170|gb|ACG30415.1| blight-associated protein p12 precursor [Zea mays]

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 60/114 (52%), Positives = 76/114 (66%), Gaps = 2/114 (1%)

Query: 16  CLISTAYAAQGNAVYYDPPYTKSACYQNQDHGTMVTGVSDALWDGGRACGRRYKVQCVRG 75
           CL+S + A QG A YY   YT SACY NQD GT++   SDALW+GG ACG  Y V CV G
Sbjct: 19  CLVSASLADQGTATYYTV-YTPSACYGNQDEGTLIAAASDALWNGGAACGTMYTVTCVAG 77

Query: 76  ANTAPHPCHDGASVEVEVVDYCRQP-CNGVLNLSKDAFAVIADTVAGKVQVEYN 128
            N  P+PC+ GASV V++VD C  P C   L+LS+ AFA I +  AGK+ ++Y+
Sbjct: 78  TNETPNPCNPGASVTVKIVDLCPSPGCQATLDLSQQAFATIGNLGAGKIVIDYS 131

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	130
TAIR|locus:2053983	130	PNP-A "plant natriuretic pepti	0.938	0.938	0.532	7.7e-32
TAIR|locus:2118656	123	AT4G30380 "AT4G30380" [Arabido	0.915	0.967	0.414	4.8e-23
TAIR|locus:2090161	252	EXPA12 "expansin 12" [Arabidop	0.792	0.408	0.313	5e-05
TAIR|locus:2099991	260	EXPA16 "expansin A16" [Arabido	0.676	0.338	0.318	0.00015
TAIR|locus:2198576	252	EXPA11 "expansin 11" [Arabidop	0.538	0.277	0.341	0.00023
TAIR|locus:2043240	257	EXPA4 "expansin A4" [Arabidops	0.676	0.342	0.327	0.00024

TAIR|locus:2053983 PNP-A "plant natriuretic peptide A" [Arabidopsis thaliana (taxid:3702)]

 Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
 Identities = 66/124 (53%), Positives = 85/124 (68%)

Query:     7 ILMMACLVLCLISTAYAAQGNAVYYDPPYTKSACYQNQDHGTMVTGVSDALWDGGRACGR 66
             +++M      L   A AAQG AVYYDPPYT+SACY  Q   T+V GV + LW  GRACGR
Sbjct:     9 VVVMIVFAQILAPIAEAAQGKAVYYDPPYTRSACYGTQRE-TLVVGVKNNLWQNGRACGR 67

Query:    67 RYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIADTVAGKVQVE 126
             RY+V+C+         C  G +V+V+VVD+CR+PCNG LNLS+DAF VIA+T AG ++V 
Sbjct:    68 RYRVRCIGATYNFDRAC-TGRTVDVKVVDFCREPCNGDLNLSRDAFRVIANTDAGNIRVV 126

Query:   127 YNPV 130
             Y P+
Sbjct:   127 YTPI 130

GO:0005576 "extracellular region" evidence=ISM;ISS

GO:0005618 "cell wall" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0010230 "alternative respiration" evidence=IDA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2118656 AT4G30380 "AT4G30380" [Arabidopsis thaliana (taxid:3702)]

 Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 51/123 (41%), Positives = 74/123 (60%)

Query:     7 ILMMACLVLCLISTAYAAQGNAVYYDPPYTKSACYQNQDHGTMVTGVSDALWDGGRACGR 66
             I+  + +++ L S +YA  G A +Y   YT   CY+    G M+   SD LWD GR CG+
Sbjct:     5 IVFFSTVLVFLFSFSYATPGIATFYTS-YTP--CYRGTQEGVMIAAASDTLWDNGRVCGK 61

Query:    67 RYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIADTVAGKVQVE 126
              + V+C    N  PHPC  G SV+V++VD+C   C   L+LS++AFA IA+ VAG + ++
Sbjct:    62 MFTVKCSGPRNAVPHPC-TGKSVKVKIVDHCPSGCASTLDLSREAFAQIANPVAGIINID 120

Query:   127 YNP 129
             Y P
Sbjct:   121 YFP 123

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0071456 "cellular response to hypoxia" evidence=IEP

TAIR|locus:2090161 EXPA12 "expansin 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 101 (40.6 bits), Expect = 5.0e-05, P = 5.0e-05
 Identities = 36/115 (31%), Positives = 55/115 (47%)

Query:     7 ILMMACLVLCLISTAYAAQGNAVYY---DPPYTKS-AC-YQNQDH---GTMVTGVSDALW 58
             IL+++ L + + S  +  + +A YY   D P +   AC Y N  H   G     +S  L+
Sbjct:    12 ILLVSTLSVGMCSNGWI-RAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELF 70

Query:    59 DGGRACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYC-RQPCNGVLNLSKDAF 112
               G +CG  Y+V+C   A+  P  C  GA+V V   ++C     NG  NL +  F
Sbjct:    71 RSGESCGGCYQVRCDFPAD--PKWCLRGAAVTVTATNFCPTNNNNGWCNLPRHHF 123

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA;ISS

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

TAIR|locus:2099991 EXPA16 "expansin A16" [Arabidopsis thaliana (taxid:3702)]

 Score = 97 (39.2 bits), Expect = 0.00015, P = 0.00015
 Identities = 35/110 (31%), Positives = 52/110 (47%)

Query:    39 AC-YQN---QDHGTMVTGVSDALWDGGRACGRRYKVQCVRGANTAPHPCHDG-ASVEVEV 93
             AC Y N   Q +GT    +S +L++ G++CG  ++++CV      P  CH G  SV V  
Sbjct:    54 ACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVND----PKWCHPGNPSVFVTA 109

Query:    94 VDYC----RQP------CN---GVLNLSKDAFAVIADTVAGKVQVEYNPV 130
              ++C     QP      CN      +L+   F  IA+  AG V + Y  V
Sbjct:   110 TNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRV 159

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0006949 "syncytium formation" evidence=IEP

TAIR|locus:2198576 EXPA11 "expansin 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 95 (38.5 bits), Expect = 0.00023, P = 0.00023
 Identities = 27/79 (34%), Positives = 38/79 (48%)

Query:    19 STAYAAQGNAVYYDPPYTKSACYQNQDHGTMVTGVSDALWDGGRACGRRYKVQCVRGANT 78
             S A    G A  Y   Y  SA Y     GTM   +S AL++ G +CG  Y++ C   A++
Sbjct:    37 SDASGTMGGACGYGDLY--SAGY-----GTMTAALSTALFNDGASCGECYRITCDHAADS 89

Query:    79 APHPCHDGASVEVEVVDYC 97
                 C  GASV +   ++C
Sbjct:    90 --RWCLKGASVVITATNFC 106

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0005618 "cell wall" evidence=IDA

TAIR|locus:2043240 EXPA4 "expansin A4" [Arabidopsis thaliana (taxid:3702)]

 Score = 95 (38.5 bits), Expect = 0.00024, P = 0.00024
 Identities = 36/110 (32%), Positives = 52/110 (47%)

Query:    39 AC-YQN---QDHGTMVTGVSDALWDGGRACGRRYKVQCVRGANTAPHPCHDGA-SVEVEV 93
             AC Y N   Q +GT    +S AL++ G +CG  ++++C   AN  P  CH G+ S+ +  
Sbjct:    51 ACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKC---AND-PQWCHSGSPSILITA 106

Query:    94 VDYC----RQP------CNGV---LNLSKDAFAVIADTVAGKVQVEYNPV 130
              ++C     QP      CN      +L+   F  IA   AG V V Y  V
Sbjct:   107 TNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRV 156


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.135   0.431    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      130       130   0.00091  102 3  11 22  0.36    31
                                                     29  0.42    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  595 (63 KB)
  Total size of DFA:  147 KB (2089 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.12u 0.10s 11.22t   Elapsed:  00:00:01
  Total cpu time:  11.12u 0.10s 11.22t   Elapsed:  00:00:01
  Start:  Fri May 10 08:44:43 2013   End:  Fri May 10 08:44:44 2013

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0006949 "syncytium formation" evidence=IEP;RCA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ZV52	EGC2_ARATH	No assigned EC number	0.5322	0.9384	0.9384	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	130
PLN03024	125	PLN03024, PLN03024, Putative EG45-like domain cont	3e-32
pfam03330	77	pfam03330, DPBB_1, Rare lipoprotein A (RlpA)-like	3e-16
smart00837	87	smart00837, DPBB_1, Rare lipoprotein A (RlpA)-like	1e-06
PLN00193	256	PLN00193, PLN00193, expansin-A; Provisional	0.002

>gnl|CDD|178595 PLN03024, PLN03024, Putative EG45-like domain containing protein 1; Provisional

 Score =  110 bits (275), Expect = 3e-32
 Identities = 53/124 (42%), Positives = 78/124 (62%), Gaps = 2/124 (1%)

Query: 6   KILMMACLVLCLISTAYAAQGNAVYYDPPYTKSACYQNQDHGTMVTGVSDALWDGGRACG 65
           +IL+ + +++ L S +YA  G A +Y   YT SACY+    G M+   SD+LW+ GR CG
Sbjct: 4   RILIFSTVLVFLFSVSYATPGIATFYTS-YTPSACYRGTSFGVMIAAASDSLWNNGRVCG 62

Query: 66  RRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIADTVAGKVQV 125
           + + V+C    N  PHPC  G SV V++VD+C   C   L+LS++AFA IA+ VAG + +
Sbjct: 63  KMFTVKCKGPRNAVPHPC-TGKSVTVKIVDHCPSGCASTLDLSREAFAQIANPVAGIINI 121

Query: 126 EYNP 129
           +Y P
Sbjct: 122 DYIP 125

Length = 125

>gnl|CDD|217497 pfam03330, DPBB_1, Rare lipoprotein A (RlpA)-like double-psi beta-barrel

 Score = 68.0 bits (167), Expect = 3e-16
 Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 1/78 (1%)

Query: 50  VTGVSDALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGVLNLSK 109
               S +L++ G ACG  Y+V+C+  A+     C    SV V + D C  P     +LS 
Sbjct: 1   TAAGSASLYNDGTACGECYQVKCLTAAHPTGT-CRVLRSVTVTITDRCPFPPRRHFDLSG 59

Query: 110 DAFAVIADTVAGKVQVEY 127
            AF  +A   AG V VEY
Sbjct: 60  PAFEALAKPRAGIVPVEY 77

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen. Length = 77

>gnl|CDD|129070 smart00837, DPBB_1, Rare lipoprotein A (RlpA)-like double-psi beta-barrel

 Score = 43.2 bits (102), Expect = 1e-06
 Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 17/90 (18%)

Query: 51  TGVSDALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCR------------ 98
             +S AL++ G +CG  Y++ CV     +P  C  G S+ V   ++C             
Sbjct: 2   AALSTALFNNGASCGACYEIMCVD----SPKWCKPGGSITVTATNFCPPNYALSNDNGGW 57

Query: 99  -QPCNGVLNLSKDAFAVIADTVAGKVQVEY 127
             P     +LS+ AF  IA   AG V V+Y
Sbjct: 58  CNPPRKHFDLSQPAFEKIAQYKAGIVPVKY 87

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen. Length = 87

>gnl|CDD|215097 PLN00193, PLN00193, expansin-A; Provisional

 Score = 36.4 bits (84), Expect = 0.002
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)

Query: 46  HGTMVTGVSDALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYC 97
           +GT    +S AL++ G +CG+ Y++ C   A+     C  GASV +   ++C
Sbjct: 61  YGTRTAALSTALFNDGASCGQCYRIMCDYQAD--SRWCIKGASVTITATNFC 110

Length = 256

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	130
PLN03024	125	Putative EG45-like domain containing protein 1; Pr	100.0
PLN00193	256	expansin-A; Provisional	99.97
PLN03023	247	Expansin-like B1; Provisional	99.96
PLN00050	247	expansin A; Provisional	99.96
smart00837	87	DPBB_1 Rare lipoprotein A (RlpA)-like double-psi b	99.9
PF03330	78	DPBB_1: Rare lipoprotein A (RlpA)-like double-psi	99.89
COG4305	232	Endoglucanase C-terminal domain/subunit and relate	99.56
TIGR00413	208	rlpA rare lipoprotein A. This is a family of proka	99.33
PF00967	119	Barwin: Barwin family; InterPro: IPR001153 Barwin	99.3
COG0797	233	RlpA Lipoproteins [Cell envelope biogenesis, outer	99.28
PRK10672	361	rare lipoprotein A; Provisional	99.07
PF07249	119	Cerato-platanin: Cerato-platanin; InterPro: IPR010	98.79
PF02015	201	Glyco_hydro_45: Glycosyl hydrolase family 45; Inte	94.7

>PLN03024 Putative EG45-like domain containing protein 1; Provisional

Probab=100.00  E-value=6.9e-38  Score=223.10  Aligned_cols=122  Identities=43%  Similarity=0.922  Sum_probs=109.1

Q ss_pred             HHHHHHHHHHHHhhccCceeeEEEEeCCCCCCCCcCCccCCCceEEEecccccCCCCcCCCEEEEEEccCCCCCCCCCCC
Q 032956            6 KILMMACLVLCLISTAYAAQGNAVYYDPPYTKSACYQNQDHGTMVTGVSDALWDGGRACGRRYKVQCVRGANTAPHPCHD   85 (130)
Q Consensus         6 ~~~~~~~~~~~~~~~a~~~~G~aT~Y~~~~~~gAC~~~~~~~~~~aAls~~~~~~g~~CG~c~~v~~~~~~~~~p~~C~~   85 (130)
                      ++||++.+++.|.+++....|+||||++ .++||||++.+++.++||+|+.+|++|+.||+||||+|.+...+++.+|+ 
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~G~AT~Y~~-~~~gAC~~~~~~g~~iaAls~~lf~~G~~CG~c~~V~C~~~~~~~~~~c~-   81 (125)
T PLN03024          4 RILIFSTVLVFLFSVSYATPGIATFYTS-YTPSACYRGTSFGVMIAAASDSLWNNGRVCGKMFTVKCKGPRNAVPHPCT-   81 (125)
T ss_pred             eeHHHHHHHHHHhhhhcccceEEEEeCC-CCCccccCCCCCCCEeEEeCHHHcCCCcccCceEEEEECCCCcccccccc-
Confidence            4566777799999999999999999996 57899987778899999999999999999999999999764434467899 


Q ss_pred             CCeEEEEEeeCCCCCCCCceEcCHHHHHhhccCCCcEEEEEEEE
Q 032956           86 GASVEVEVVDYCRQPCNGVLNLSKDAFAVIADTVAGKVQVEYNP  129 (130)
Q Consensus        86 g~sv~v~V~D~Cp~~C~~~lDLS~~AF~~la~~~~G~i~v~w~~  129 (130)
                      +++|+|+|+|+||.+|+.|||||++||++||+++.|+++|+|++
T Consensus        82 gksV~V~VtD~CP~~C~~~~DLS~~AF~~iA~~~aG~v~V~y~~  125 (125)
T PLN03024         82 GKSVTVKIVDHCPSGCASTLDLSREAFAQIANPVAGIINIDYIP  125 (125)
T ss_pred             CCeEEEEEEcCCCCCCCCceEcCHHHHHHhcCccCCEEEEEEeC
Confidence            99999999999995588999999999999999999999999975

>PLN00193 expansin-A; Provisional

Probab=99.97  E-value=9.5e-31  Score=205.44  Aligned_cols=128  Identities=26%  Similarity=0.499  Sum_probs=102.8

Q ss_pred             CchHHHHHHHHHHHHHHh-------hccCceeeEEEEeCCCCC----CCCc-CCcc---CCCceEEEecccccCCCCcCC
Q 032956            1 MRIQMKILMMACLVLCLI-------STAYAAQGNAVYYDPPYT----KSAC-YQNQ---DHGTMVTGVSDALWDGGRACG   65 (130)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~-------~~a~~~~G~aT~Y~~~~~----~gAC-~~~~---~~~~~~aAls~~~~~~g~~CG   65 (130)
                      |.+.+.-|.+++.+++.+       +.+.|.+++||||+.+++    +||| |++.   +.+.++||+|+.+|++|..||
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~a~AT~Yg~~d~~gt~gGACGYg~l~~~~~g~~~AAls~~lf~~G~~CG   80 (256)
T PLN00193          1 MSKSLLGLAILLQFCCYLFINVNAFTPSGWTKAHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASCG   80 (256)
T ss_pred             CchhhHHHHHHHHHHHHHHhhccCcCCCCceeeEEEEcCCCCCCCCCCcccCCCCccccCCCceeeecCHhHccCCcccc
Confidence            555544444444444433       233799999999997654    6999 7764   468899999999999999999


Q ss_pred             CEEEEEEccCCCCCCCCCCCCCeEEEEEeeCCCCC----------CC---CceEcCHHHHHhhccCCCcEEEEEEEEC
Q 032956           66 RRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQP----------CN---GVLNLSKDAFAVIADTVAGKVQVEYNPV  130 (130)
Q Consensus        66 ~c~~v~~~~~~~~~p~~C~~g~sv~v~V~D~Cp~~----------C~---~~lDLS~~AF~~la~~~~G~i~v~w~~V  130 (130)
                      +||||+|...  ..|++|.+|++|+|+|||+||.+          |.   .|||||..||.+||....|+++|+||+|
T Consensus        81 aCyev~C~~~--~~~~~C~~g~sV~Vt~td~CP~n~~~~~~~ggwC~~~~~HFDLS~~AF~~iA~~~~Giv~V~yrRV  156 (256)
T PLN00193         81 QCYRIMCDYQ--ADSRWCIKGASVTITATNFCPPNYALPNNNGGWCNPPLQHFDMAQPAWEKIGIYRGGIVPVLFQRV  156 (256)
T ss_pred             CeEEEECCCC--CCCccccCCCeEEEEEecCCCCcccccccCCCcCCCCCcccccCHHHHHHHhhhcCCeEeEEEEEe
Confidence            9999999532  13678976789999999999942          85   7999999999999999999999999997

>PLN03023 Expansin-like B1; Provisional

Probab=99.96  E-value=2.8e-29  Score=196.30  Aligned_cols=103  Identities=34%  Similarity=0.580  Sum_probs=91.3

Q ss_pred             ccCceeeEEEEeCCCCC----CCCc-CCcc---CCCceEEEecccccCCCCcCCCEEEEEEccCCCCCCCCCCCCCeEEE
Q 032956           20 TAYAAQGNAVYYDPPYT----KSAC-YQNQ---DHGTMVTGVSDALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVEV   91 (130)
Q Consensus        20 ~a~~~~G~aT~Y~~~~~----~gAC-~~~~---~~~~~~aAls~~~~~~g~~CG~c~~v~~~~~~~~~p~~C~~g~sv~v   91 (130)
                      .+.|.+++||||+++++    +||| |++.   .++..+||+| .+|++|..||+||||+|.+     |++|. +++|+|
T Consensus        22 ~~~W~~a~AT~Yg~~~g~gt~gGACGYg~~~~~~~g~~~aa~s-~Lf~~G~~CGaCy~irC~~-----~~~C~-~~~v~V   94 (247)
T PLN03023         22 SQDFTYSRATYYGSPDCLGTPTGACGFGEYGRTVNGGNVAGVS-RLYRNGTGCGACYQVRCKA-----PNLCS-DDGVNV   94 (247)
T ss_pred             cCCcccceEEEeCCCCCCCCCCccccCCccccCCCcceeeeeh-hhhcCCchhcccEEeecCC-----CCccC-CCCeEE
Confidence            35899999999999873    8899 7775   3578899998 9999999999999999964     67898 679999


Q ss_pred             EEeeCCCCCCCCceEcCHHHHHhhccC-------CCcEEEEEEEEC
Q 032956           92 EVVDYCRQPCNGVLNLSKDAFAVIADT-------VAGKVQVEYNPV  130 (130)
Q Consensus        92 ~V~D~Cp~~C~~~lDLS~~AF~~la~~-------~~G~i~v~w~~V  130 (130)
                      +|||.|| ++..|||||.+||.+||.+       ..|+|+|+||||
T Consensus        95 ~iTd~~~-~~~~hFdLS~~AF~~iA~pg~~~~l~~aGiv~v~YrRV  139 (247)
T PLN03023         95 VVTDYGE-GDKTDFILSPRAYARLARPNMAAELFAYGVVDVEYRRI  139 (247)
T ss_pred             EEEeCCC-CCCCccccCHHHHHHHhCccccchhccCcEEEeEEEEE
Confidence            9999999 7679999999999999973       579999999997

>PLN00050 expansin A; Provisional

Probab=99.96  E-value=2.1e-29  Score=197.06  Aligned_cols=105  Identities=30%  Similarity=0.551  Sum_probs=92.7

Q ss_pred             cCceeeEEEEeCCCCC----CCCc-CCcc---CCCceEEEecccccCCCCcCCCEEEEEEccCCCCCCCCCCCCCeEEEE
Q 032956           21 AYAAQGNAVYYDPPYT----KSAC-YQNQ---DHGTMVTGVSDALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVEVE   92 (130)
Q Consensus        21 a~~~~G~aT~Y~~~~~----~gAC-~~~~---~~~~~~aAls~~~~~~g~~CG~c~~v~~~~~~~~~p~~C~~g~sv~v~   92 (130)
                      ..|..++||||+.+++    +||| |++.   +.+.++||+|+.+|++|..||+||||+|.+.    +.+|. +++|+|+
T Consensus        23 ~~W~~a~AT~Yg~~dg~gt~gGACGYg~l~~~~~g~~~AAls~~lf~~G~~CGaCyeV~C~~~----~~~C~-~gsV~V~   97 (247)
T PLN00050         23 SGWTGAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCVND----NIWCL-PGSIIIT   97 (247)
T ss_pred             CCccccEEEEcCCCCCCCCCCcccCCCCccccCCCceeeeccHhHccCCccccceEEEEcCCC----CcccC-CCcEEEE
Confidence            4799999999998754    6999 7774   4688999999999999999999999999642    45788 5599999


Q ss_pred             EeeCCCC----------CCC---CceEcCHHHHHhhccCCCcEEEEEEEEC
Q 032956           93 VVDYCRQ----------PCN---GVLNLSKDAFAVIADTVAGKVQVEYNPV  130 (130)
Q Consensus        93 V~D~Cp~----------~C~---~~lDLS~~AF~~la~~~~G~i~v~w~~V  130 (130)
                      |||+||.          +|.   .|||||..||.+||..+.|+|+|+||+|
T Consensus        98 itd~CP~~~~~~~~~~gwC~~~~~hFDLS~~AF~~iA~~~aGii~V~yRRV  148 (247)
T PLN00050         98 ATNFCPPNLALPNNDGGWCNPPQQHFDLSQPVFQKIAQYKAGIVPVQYRRV  148 (247)
T ss_pred             EecCCCCCcCcCccCCCcCCCCCcccccCHHHHHHHhhhcCCeeeeEEEEe
Confidence            9999994          184   8999999999999999999999999997

>smart00837 DPBB_1 Rare lipoprotein A (RlpA)-like double-psi beta-barrel

Probab=99.90  E-value=3.6e-24  Score=144.09  Aligned_cols=74  Identities=38%  Similarity=0.772  Sum_probs=66.4

Q ss_pred             EEEecccccCCCCcCCCEEEEEEccCCCCCCCCCCCCCeEEEEEeeCCCCC----------CC---CceEcCHHHHHhhc
Q 032956           50 VTGVSDALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQP----------CN---GVLNLSKDAFAVIA  116 (130)
Q Consensus        50 ~aAls~~~~~~g~~CG~c~~v~~~~~~~~~p~~C~~g~sv~v~V~D~Cp~~----------C~---~~lDLS~~AF~~la  116 (130)
                      +||+|+.+|++|..||+||||+|.+    .|.+|.++++|+|+|||+||.+          |.   .|||||..||.+||
T Consensus         1 taA~s~~lf~~G~~CG~Cy~v~C~~----~~~~C~~~~~V~V~vtd~CP~~~~~~~~~~~~C~~~~~hfDLS~~AF~~iA   76 (87)
T smart00837        1 TAALSTALFNNGASCGACYEIMCVD----SPKWCKPGGSITVTATNFCPPNYALSNDNGGWCNPPRKHFDLSQPAFEKIA   76 (87)
T ss_pred             CcccCHHHccCCccccceEEEEeCC----CCCcccCCCeEEEEEeccCCccccccccCCCccCCCCcCeEcCHHHHHHHh
Confidence            4899999999999999999999954    3668886789999999999942          64   79999999999999


Q ss_pred             cCCCcEEEEEE
Q 032956          117 DTVAGKVQVEY  127 (130)
Q Consensus       117 ~~~~G~i~v~w  127 (130)
                      .++.|+|+|+|
T Consensus        77 ~~~~Gvi~v~y   87 (87)
T smart00837       77 QYKAGIVPVKY   87 (87)
T ss_pred             hhcCCEEeeEC
Confidence            99999999997

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen.

>PF03330 DPBB_1: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; InterPro: IPR009009 Beta barrels are commonly observed in protein structures

Probab=99.89  E-value=2.6e-23  Score=136.44  Aligned_cols=76  Identities=41%  Similarity=0.723  Sum_probs=61.2

Q ss_pred             EEEecccccCCCCcCCCEEEEEEccCCCCCCCCCCCC-CeEEEEEeeCCCCCCC-CceEcCHHHHHhhccCCCcEEEEEE
Q 032956           50 VTGVSDALWDGGRACGRRYKVQCVRGANTAPHPCHDG-ASVEVEVVDYCRQPCN-GVLNLSKDAFAVIADTVAGKVQVEY  127 (130)
Q Consensus        50 ~aAls~~~~~~g~~CG~c~~v~~~~~~~~~p~~C~~g-~sv~v~V~D~Cp~~C~-~~lDLS~~AF~~la~~~~G~i~v~w  127 (130)
                      +||++..+|++|..||+|+++++.......+. |..+ ++|+|+|+|+|| +|. +|||||+.||++|++++.|+++|+|
T Consensus         1 t~a~~~~~y~~g~~cG~~~~~~~~~~a~~~~~-~~~~~ksV~v~V~D~Cp-~~~~~~lDLS~~aF~~la~~~~G~i~V~w   78 (78)
T PF03330_consen    1 TAAGSATWYDNGTACGQCYQVTCLTAASATGT-CKVGNKSVTVTVVDRCP-GCPPNHLDLSPAAFKALADPDAGVIPVEW   78 (78)
T ss_dssp             EEEE-HHHHGGGTTTT-EEEEEE---SSTT---BESEECEEEEEEEEE-T-TSSSSEEEEEHHHHHHTBSTTCSSEEEEE
T ss_pred             CeEEEhhhcCCCCcCCCeeeccccccCCccce-EEecCCeEEEEEEccCC-CCcCCEEEeCHHHHHHhCCCCceEEEEEC
Confidence            58999999999999999999999543321122 6622 999999999999 899 9999999999999999999999999

They are classified in terms of two integral parameters: the number of strands in the sheet, n, and the shear number, S, a measure of the stagger of the strands in the beta-sheet. These two parameters have been shown to determine the major geometrical features of beta-barrels. Six-stranded beta-barrels with a pseudo-twofold axis are found in several proteins. One involving parallel strands forming two psi structures is known as the double-psi barrel. The first psi structure consists of the loop connecting strands beta1 and beta2 (a 'psi loop') and the strand beta5, whereas the second psi structure consists of the loop connecting strands beta4 and beta5 and the strand beta2. All the psi structures in double-psi barrels have a unique handedness, in that beta1 (beta4), beta2 (beta5) and the loop following beta5 (beta2) form a right-handed helix. The unique handedness may be related to the fact that the twisting angle between the parallel pair of strands is always larger than that between the antiparallel pair [].; PDB: 1N10_B 3D30_A 2BH0_A 2HCZ_X.

>COG4305 Endoglucanase C-terminal domain/subunit and related proteins [Carbohydrate transport and metabolism]

Probab=99.56  E-value=2.9e-14  Score=106.62  Aligned_cols=94  Identities=27%  Similarity=0.360  Sum_probs=83.1

Q ss_pred             eeeEEEEeCCCCCCCCc-CCccCCCceEEEecccccCCC----CcCCCEEEEEEccCCCCCCCCCCCCCeEEEEEeeCCC
Q 032956           24 AQGNAVYYDPPYTKSAC-YQNQDHGTMVTGVSDALWDGG----RACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCR   98 (130)
Q Consensus        24 ~~G~aT~Y~~~~~~gAC-~~~~~~~~~~aAls~~~~~~g----~~CG~c~~v~~~~~~~~~p~~C~~g~sv~v~V~D~Cp   98 (130)
                      +.|-|||-+..+.+||= ..+++.+..+.|++..+.|-|    +.-|..++|.+            |.++.+|.|+|+-|
T Consensus        31 f~G~ATyTgsGYsGGAflLDPI~sd~eITAlNPaqlNlGGipAAmAGaYLrVqG------------PKG~TTVYVTDlYP   98 (232)
T COG4305          31 FEGYATYTGSGYSGGAFLLDPIPSDMEITALNPAQLNLGGIPAAMAGAYLRVQG------------PKGKTTVYVTDLYP   98 (232)
T ss_pred             cceeEEEecccccCceEEecCcCCcceeeecCHHHcccCCchhhhccceEEEEC------------CCCceEEEEecccc
Confidence            68999999888889998 677888889999998887754    57899999986            46788999999999


Q ss_pred             CCCC-CceEcCHHHHHhhccCCCcEEEEEEEEC
Q 032956           99 QPCN-GVLNLSKDAFAVIADTVAGKVQVEYNPV  130 (130)
Q Consensus        99 ~~C~-~~lDLS~~AF~~la~~~~G~i~v~w~~V  130 (130)
                       +-. +.||||+.||.+|++...|+|+|+||.|
T Consensus        99 -egasGaLDLSpNAFakIGnm~qGrIpvqWrvv  130 (232)
T COG4305          99 -EGASGALDLSPNAFAKIGNMKQGRIPVQWRVV  130 (232)
T ss_pred             -cccccccccChHHHhhhcchhcCccceeEEEe
Confidence             555 9999999999999999999999999976

>TIGR00413 rlpA rare lipoprotein A

Probab=99.33  E-value=1.8e-11  Score=93.66  Aligned_cols=88  Identities=22%  Similarity=0.218  Sum_probs=74.5

Q ss_pred             eEEEEeCCCCC--CCCcCCccCCCceEEEecccccCCCCcCCCEEEEEEccCCCCCCCCCCCCCeEEEEEeeCCCCCCC-
Q 032956           26 GNAVYYDPPYT--KSACYQNQDHGTMVTGVSDALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCN-  102 (130)
Q Consensus        26 G~aT~Y~~~~~--~gAC~~~~~~~~~~aAls~~~~~~g~~CG~c~~v~~~~~~~~~p~~C~~g~sv~v~V~D~Cp~~C~-  102 (130)
                      |.|+||++...  ..|.|..++...++||..+      ...|..++||+..         | |++|+|+|+|++| -=. 
T Consensus         1 G~ASwYg~~f~G~~TAnGe~y~~~~~tAAHkt------LPlgT~V~VtNl~---------n-grsviVrVnDRGP-f~~g   63 (208)
T TIGR00413         1 GLASWYGPKFHGRKTANGEVYNMKALTAAHKT------LPFNTYVKVTNLH---------N-NRSVIVRINDRGP-FSDD   63 (208)
T ss_pred             CEEeEeCCCCCCCcCCCCeecCCCcccccccc------CCCCCEEEEEECC---------C-CCEEEEEEeCCCC-CCCC
Confidence            67999998543  6777777777889999775      3669999999864         5 9999999999999 544 


Q ss_pred             CceEcCHHHHHhhccCCCcEEEEEEEEC
Q 032956          103 GVLNLSKDAFAVIADTVAGKVQVEYNPV  130 (130)
Q Consensus       103 ~~lDLS~~AF~~la~~~~G~i~v~w~~V  130 (130)
                      .-||||+.|+++|+..+.|+.+|+.+.+
T Consensus        64 RiIDLS~aAA~~Lg~~~~G~a~V~vevl   91 (208)
T TIGR00413        64 RIIDLSHAAAREIGLISRGVGQVRIEVL   91 (208)
T ss_pred             CEEECCHHHHHHcCCCcCceEEEEEEEE
Confidence            7899999999999999999999888753

This is a family of prokaryotic proteins with unknown function. Lipoprotein annotation based on the presence of consensus lipoprotein signal sequence. Included in this family is the E. coli putative lipoprotein rlpA.

>PF00967 Barwin: Barwin family; InterPro: IPR001153 Barwin is a basic protein isolated from aqueous extracts of barley seeds

Probab=99.30  E-value=1.3e-12  Score=91.19  Aligned_cols=58  Identities=33%  Similarity=0.563  Sum_probs=43.8

Q ss_pred             CCCcCCCEEEEEEccCCCCCCCCCCCCCeEEEEEeeCCCCCCCCceEcCHHHHHhhcc----CCCcEEEEEEEEC
Q 032956           60 GGRACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIAD----TVAGKVQVEYNPV  130 (130)
Q Consensus        60 ~g~~CG~c~~v~~~~~~~~~p~~C~~g~sv~v~V~D~Cp~~C~~~lDLS~~AF~~la~----~~~G~i~v~w~~V  130 (130)
                      +...||+|++||++.         + |.+++|+|||+|+ .+  +|||.+.+|++|-.    ...|.+.|+|++|
T Consensus        56 gq~~CGkClrVTNt~---------t-ga~~~~RIVDqCs-nG--GLDld~~vF~~iDtdG~G~~~Ghl~V~y~fV  117 (119)
T PF00967_consen   56 GQDSCGKCLRVTNTA---------T-GAQVTVRIVDQCS-NG--GLDLDPTVFNQIDTDGQGYAQGHLIVDYEFV  117 (119)
T ss_dssp             SGGGTT-EEEEE-TT---------T---EEEEEEEEE-S-SS--SEES-SSSHHHH-SSSHHHHHTEEEEEEEEE
T ss_pred             CcccccceEEEEecC---------C-CcEEEEEEEEcCC-CC--CcccChhHHhhhccCCcccccceEEEEEEEE
Confidence            346899999999864         4 8999999999999 44  89999999999953    3579999999987

It is 125 amino acids in length, and contains six cysteine residues that combine to form three disulphide bridges [, ]. Comparative analysis shows the sequence to be highly similar to a 122 amino acid stretch in the C-terminal of the products of two wound-induced genes (win1 and win2) from potato, the product of the hevein gene of rubber trees, and pathogenesis-related protein 4 from tobacco. The high levels of similarity to these proteins, and their ability to bind saccharides, suggest that the barwin domain may be involved in a common defence mechanism in plants.; GO: 0042742 defense response to bacterium, 0050832 defense response to fungus; PDB: 1BW3_A 1BW4_A.

>COG0797 RlpA Lipoproteins [Cell envelope biogenesis, outer membrane]

Probab=99.28  E-value=3.5e-11  Score=93.37  Aligned_cols=93  Identities=19%  Similarity=0.245  Sum_probs=76.1

Q ss_pred             cCceeeEEEEeCCCCC--CCCcCCccCCCceEEEecccccCCCCcCCCEEEEEEccCCCCCCCCCCCCCeEEEEEeeCCC
Q 032956           21 AYAAQGNAVYYDPPYT--KSACYQNQDHGTMVTGVSDALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCR   98 (130)
Q Consensus        21 a~~~~G~aT~Y~~~~~--~gAC~~~~~~~~~~aAls~~~~~~g~~CG~c~~v~~~~~~~~~p~~C~~g~sv~v~V~D~Cp   98 (130)
                      .....|.|+|||....  ..|=|..++.+.++||..+--|      |..++||+.+         | |++|+|+|.|++|
T Consensus        80 ~~~~~G~ASwYg~~fhgr~TA~Ge~~n~~~~tAAH~TLP~------~t~v~VtNl~---------N-grsvvVRINDRGP  143 (233)
T COG0797          80 SFEQVGYASWYGEKFHGRKTANGERYDMNALTAAHKTLPL------PTYVRVTNLD---------N-GRSVVVRINDRGP  143 (233)
T ss_pred             cccccceeeeeccccCCccccCcccccccccccccccCCC------CCEEEEEEcc---------C-CcEEEEEEeCCCC
Confidence            3446899999997654  3444555688999999887555      8999999976         6 9999999999999


Q ss_pred             CCCC-CceEcCHHHHHhhccCCCcEEEEEEEEC
Q 032956           99 QPCN-GVLNLSKDAFAVIADTVAGKVQVEYNPV  130 (130)
Q Consensus        99 ~~C~-~~lDLS~~AF~~la~~~~G~i~v~w~~V  130 (130)
                       -=. ..||||..|+++|+..+.|+.+|..+++
T Consensus       144 -f~~gRiIDlS~aAA~~l~~~~~G~a~V~i~~l  175 (233)
T COG0797         144 -FVSGRIIDLSKAAADKLGMIRSGVAKVRIEVL  175 (233)
T ss_pred             -CCCCcEeEcCHHHHHHhCCccCceEEEEEEEe
Confidence             333 7899999999999999999988877764

>PRK10672 rare lipoprotein A; Provisional

Probab=99.07  E-value=2.1e-09  Score=88.27  Aligned_cols=87  Identities=18%  Similarity=0.175  Sum_probs=72.4

Q ss_pred             eeEEEEeCCCCC--CCCcCCccCCCceEEEecccccCCCCcCCCEEEEEEccCCCCCCCCCCCCCeEEEEEeeCCCCCCC
Q 032956           25 QGNAVYYDPPYT--KSACYQNQDHGTMVTGVSDALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCN  102 (130)
Q Consensus        25 ~G~aT~Y~~~~~--~gAC~~~~~~~~~~aAls~~~~~~g~~CG~c~~v~~~~~~~~~p~~C~~g~sv~v~V~D~Cp~~C~  102 (130)
                      .|.|+|||....  ..|.|..++...++||..+-      ..|..++||+..         | ||+|+|+|.|++| -=.
T Consensus        80 ~G~ASwYg~~f~G~~TA~Ge~~~~~~~tAAH~tL------Plps~vrVtNl~---------n-grsvvVrVnDRGP-~~~  142 (361)
T PRK10672         80 AGLAAIYDAEAGSNLTASGERFDPNALTAAHPTL------PIPSYVRVTNLA---------N-GRMIVVRINDRGP-YGP  142 (361)
T ss_pred             EEEEEEeCCccCCCcCcCceeecCCcCeeeccCC------CCCCEEEEEECC---------C-CcEEEEEEeCCCC-CCC
Confidence            899999998654  45556667888999998763      459999999965         6 9999999999999 445


Q ss_pred             -CceEcCHHHHHhhccCCCcEEEEEEE
Q 032956          103 -GVLNLSKDAFAVIADTVAGKVQVEYN  128 (130)
Q Consensus       103 -~~lDLS~~AF~~la~~~~G~i~v~w~  128 (130)
                       .-||||+.|+++|+....+++.|+.-
T Consensus       143 gRiiDLS~aAA~~Lg~~~~~~V~ve~i  169 (361)
T PRK10672        143 GRVIDLSRAAADRLNTSNNTKVRIDPI  169 (361)
T ss_pred             CCeeEcCHHHHHHhCCCCCceEEEEEE
Confidence             88999999999999877788887753

>PF07249 Cerato-platanin: Cerato-platanin; InterPro: IPR010829 Cerato-platanin (CP) is the first member of the cerato-platanin family

Probab=98.79  E-value=5.3e-08  Score=68.96  Aligned_cols=65  Identities=29%  Similarity=0.541  Sum_probs=48.4

Q ss_pred             eEEEecc-cccCCCCcCCCEEEEEEccCCCCCCCCCCCCCeEEEEEeeCCCCCCCCceEcCHHHHHhhcc---CCCcEEE
Q 032956           49 MVTGVSD-ALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIAD---TVAGKVQ  124 (130)
Q Consensus        49 ~~aAls~-~~~~~g~~CG~c~~v~~~~~~~~~p~~C~~g~sv~v~V~D~Cp~~C~~~lDLS~~AF~~la~---~~~G~i~  124 (130)
                      .+.+.+. .-| |++.||.|+||++           + |++|.+..+|.=+    ..|+++.+||+.|.+   .+.|+|+
T Consensus        44 ~IGg~~~V~gW-nS~~CGtC~~lty-----------~-g~si~vlaID~a~----~gfnis~~A~n~LT~g~a~~lG~V~  106 (119)
T PF07249_consen   44 YIGGAPAVAGW-NSPNCGTCWKLTY-----------N-GRSIYVLAIDHAG----GGFNISLDAMNDLTNGQAVELGRVD  106 (119)
T ss_dssp             SEEEETT--ST-T-TTTT-EEEEEE-----------T-TEEEEEEEEEE-S----SSEEE-HHHHHHHHTS-CCCC-EEE
T ss_pred             eeccccccccC-CCCCCCCeEEEEE-----------C-CeEEEEEEEecCC----CcccchHHHHHHhcCCcccceeEEE
Confidence            4455443 457 4589999999998           4 8999999999876    579999999999974   5789999


Q ss_pred             EEEEEC
Q 032956          125 VEYNPV  130 (130)
Q Consensus       125 v~w~~V  130 (130)
                      ++|++|
T Consensus       107 a~~~qV  112 (119)
T PF07249_consen  107 ATYTQV  112 (119)
T ss_dssp             -EEEEE
T ss_pred             EEEEEc
Confidence            999986

It is produced by the Ascomycete Ceratocystis fimbriata f. sp. platani and causes the severe plant disease: canker stain. This protein occurs in the cell wall of the fungus and is involved in the host-plane interaction and induces both cell necrosis and phytoalexin synthesis which is one of the first plant defense-related events. CP, like other fungal surface proteins, is able to self assemble in vitro []. CP is a 120 amino acid protein, containing 40% hydrophobic residues and two S-S bridges. It contains four cysteine residues that form two disulphide bonds []. The N-terminal region of CP is very similar to cerato-ulmin, a phytotoxic protein produced by the Ophiostoma species belonging to the hydrophobin family, which also self-assembles []. This entry also includes other precursor proteins.; PDB: 2KQA_A 3M3G_A.

>PF02015 Glyco_hydro_45: Glycosyl hydrolase family 45; InterPro: IPR000334 O-Glycosyl hydrolases 3

Probab=94.70  E-value=0.046  Score=41.97  Aligned_cols=40  Identities=18%  Similarity=0.281  Sum_probs=28.2

Q ss_pred             CcCCCEEEEEEccCCCCCCCCCCCCCeEEEEEeeCCCCCCC-CceEcCH
Q 032956           62 RACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCN-GVLNLSK  109 (130)
Q Consensus        62 ~~CG~c~~v~~~~~~~~~p~~C~~g~sv~v~V~D~Cp~~C~-~~lDLS~  109 (130)
                      ..|++||+++-+++.       -.||+.+|+|++.-- .=. +||||.-
T Consensus        82 ~~Cc~Cy~LtFt~g~-------l~GKkmiVQ~tNtG~-dlg~n~FDl~i  122 (201)
T PF02015_consen   82 SWCCACYELTFTSGP-------LKGKKMIVQVTNTGG-DLGSNQFDLAI  122 (201)
T ss_dssp             HHTT-EEEEEE-SST-------TTT-EEEEEEEEE-T-TTTTTEEEEE-
T ss_pred             CcccceEEEEEcCCC-------cCCCEeEEEecccCC-CCCCCeEEEEe
Confidence            579999999998643       239999999999887 434 8999974

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 45 GH45 from CAZY comprises enzymes with only one known activity; endoglucanase (3.2.1.4 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases, cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produce a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family K or as the glycosyl hydrolases family 45 []. The best conserved regions in these enzymes is located in the N-terminal section. It contains an aspartic acid residue which has been shown [] to act as a nucleophile in the catalytic mechanism. This also has several cysteines that are involved in forming disulphide bridges.; GO: 0008810 cellulase activity, 0005975 carbohydrate metabolic process; PDB: 1OA7_A 1OA9_A 1L8F_A 1HD5_A 4ENG_A 3ENG_A 2ENG_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	130
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	6e-16
1n10_A	241	PHL P I, pollen allergen PHL P 1; plant allergen,	2e-10
2hcz_X	245	Beta-expansin 1A; domain 1 is A beta barrel and do	2e-09

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A Length = 208

 Score = 69.9 bits (171), Expect = 6e-16
 Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 17/111 (15%)

Query: 25  QGNAVYYDPPYTKSAC-YQNQDHGTMVTGVSDALWDGG----RACGRRYKVQCVRGANTA 79
           +G A Y    Y+  A           +T ++ A  + G       G   +V+        
Sbjct: 8   EGYATYTGSGYSGGAFLLDPIPSDMEITAINPADLNYGGVKAALAGSYLEVEG------- 60

Query: 80  PHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIADTVAGKVQVEYNPV 130
                      V V D   +   G L+LS +AF  I +   GK+ +++  V
Sbjct: 61  -----PKGKTTVYVTDLYPEGARGALDLSPNAFRKIGNMKDGKINIKWRVV 106

>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3 Length = 241

 Score = 55.6 bits (133), Expect = 2e-10
 Identities = 27/117 (23%), Positives = 46/117 (39%), Gaps = 18/117 (15%)

Query: 26  GNAVYYDPPYTKSAC-YQNQDH---GTMVTGVSDALWDGGRACGRRYKVQCVRGANTAPH 81
           G      P     AC Y++ D      M    +  ++  GR CG  ++++C     T P 
Sbjct: 28  GKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKC-----TKPE 82

Query: 82  PCHDGASVEVEVVDYCRQPCNGV-LNLSKDAFAVIADT-------VAGKVQVEYNPV 130
            C     V V + D   +P      +LS  AF  +A          AG++++++  V
Sbjct: 83  ACSGEPVV-VHITDDNEEPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRV 138

>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays} Length = 245

 Score = 52.9 bits (126), Expect = 2e-09
 Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 25/133 (18%)

Query: 18  ISTAYAAQ---GNAVYY------DPPYTKSAC-YQNQD---HGTMVTGVSDALWDGGRAC 64
           I+T Y  +     A +Y        P    AC  +N +   +  M    +  ++  G+ C
Sbjct: 11  ITTNYNGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGC 70

Query: 65  GRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIADT------ 118
           G  Y+V+C       P    +  +V +  ++Y         +LS  AF  +A        
Sbjct: 71  GSCYEVRCKE----KPECSGNPVTVYITDMNYEP-IAPYHFDLSGKAFGSLAKPGLNDKI 125

Query: 119 -VAGKVQVEYNPV 130
              G + VE+  V
Sbjct: 126 RHCGIMDVEFRRV 138

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	130
2hcz_X	245	Beta-expansin 1A; domain 1 is A beta barrel and do	99.97
1n10_A	241	PHL P I, pollen allergen PHL P 1; plant allergen,	99.96
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	99.96
1wc2_A	181	Endoglucanase; hydrolase, cellulase, cellulose, do	99.92
4avr_A	95	PA4485; unknown function, GRAM-negative bacteria,	99.84
1bw3_A	125	Barwin, basic barley SEED protein; lectin; NMR {Ho	99.83
2kqa_A	129	Cerato-platanin; elicitor, secreted, toxin; NMR {C	98.67
3m3g_A	120	EPL1 protein; fungal, plant defense, fungus, polys	98.63
3sul_A	122	Cerato-platanin-like protein; double PSI beta barr	98.61
3suk_A	125	Cerato-platanin-like protein; double PSI beta barr	98.58
3suj_A	127	Cerato-platanin 1; double PSI beta barrel, unknown	98.56
3sum_A	136	Cerato-platanin-like protein; double PSI beta barr	98.47
2eng_A	210	Endoglucanase V; cellulose degradation, hydrolase	95.71
3nrl_A	81	Uncharacterized protein rumgna_01417; beta protein	81.81

>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}

Probab=99.97  E-value=1.8e-30  Score=202.09  Aligned_cols=104  Identities=27%  Similarity=0.486  Sum_probs=91.4

Q ss_pred             cCceeeEEEEeCCCCC------CCCc-CCcc---CCCceEEEecccccCCCCcCCCEEEEEEccCCCCCCCCCCCCCeEE
Q 032956           21 AYAAQGNAVYYDPPYT------KSAC-YQNQ---DHGTMVTGVSDALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVE   90 (130)
Q Consensus        21 a~~~~G~aT~Y~~~~~------~gAC-~~~~---~~~~~~aAls~~~~~~g~~CG~c~~v~~~~~~~~~p~~C~~g~sv~   90 (130)
                      ..|..|+||||+++++      +||| |++.   +.+.++||+|+.+|++|..||+||||+|.+     +..|. +++|+
T Consensus        17 ~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~p~~~~~aAls~~lf~~G~~CG~Cy~V~c~~-----~~~C~-~~sv~   90 (245)
T 2hcz_X           17 GKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKE-----KPECS-GNPVT   90 (245)
T ss_dssp             CCCEEEEEEECSCTTSCSSTTSCCTTCCCCTTSTTTTTCEEEECHHHHGGGTSTTCEEEEECCS-----SSSBC-SSCEE
T ss_pred             CceeeeEEEEeCCCCCCCcCCCCccCCCCCCCcCCCCCEEEEeCHHHcCCchhcCCeEEEEeCC-----CCccC-CCCEE
Confidence            4689999999999763      6999 6663   568999999999999999999999999965     34688 88999


Q ss_pred             EEEeeCCCCCCC-CceEcCHHHHHhhcc-------CCCcEEEEEEEEC
Q 032956           91 VEVVDYCRQPCN-GVLNLSKDAFAVIAD-------TVAGKVQVEYNPV  130 (130)
Q Consensus        91 v~V~D~Cp~~C~-~~lDLS~~AF~~la~-------~~~G~i~v~w~~V  130 (130)
                      |+|||+||+.++ .|||||+.||++||+       ++.|+|+|+||+|
T Consensus        91 V~VtD~C~C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV  138 (245)
T 2hcz_X           91 VYITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRV  138 (245)
T ss_dssp             EEEEEECCCTTSSSEEEECHHHHHHTBCTTCHHHHTTTCCEEEEEEEE
T ss_pred             EEEEeccCCCCCCccEEcCHHHHHHHhccccccccccCCEEEEEEEEE
Confidence            999999992114 999999999999998       7999999999997

>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3

Probab=99.96  E-value=3.1e-30  Score=200.40  Aligned_cols=102  Identities=25%  Similarity=0.555  Sum_probs=88.5

Q ss_pred             cCceeeEEEEeCCCC------CCCCc-CCcc---CCCceEEEecccccCCCCcCCCEEEEEEccCCCCCCCCCCCCCeEE
Q 032956           21 AYAAQGNAVYYDPPY------TKSAC-YQNQ---DHGTMVTGVSDALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVE   90 (130)
Q Consensus        21 a~~~~G~aT~Y~~~~------~~gAC-~~~~---~~~~~~aAls~~~~~~g~~CG~c~~v~~~~~~~~~p~~C~~g~sv~   90 (130)
                      +.|..|+||||++++      .+||| |++.   +.+.++||+|+.+|++|..||+||||+|.+     +..|. +++|+
T Consensus        17 ~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~~~g~~~aAls~~lf~~G~~CG~CyeV~c~~-----~~~C~-~~~v~   90 (241)
T 1n10_A           17 DKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTK-----PEACS-GEPVV   90 (241)
T ss_dssp             CSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECS-----STTBC-SCCEE
T ss_pred             CCceeeEEEEeCCCCCCCcCCCCeeCCCCCcCcCCCCcEEEEeCHHHccCcccCCCeEEEEeCC-----CCccC-CCCEE
Confidence            479999999999876      37999 6763   568999999999999999999999999965     34688 88999


Q ss_pred             EEEeeCCCCCC--C-CceEcCHHHHHhhcc-------CCCcEEEEEEEEC
Q 032956           91 VEVVDYCRQPC--N-GVLNLSKDAFAVIAD-------TVAGKVQVEYNPV  130 (130)
Q Consensus        91 v~V~D~Cp~~C--~-~~lDLS~~AF~~la~-------~~~G~i~v~w~~V  130 (130)
                      |+|||+|+  |  + .|||||+.||++||+       ++.|+|+|+||+|
T Consensus        91 V~VtD~C~--C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV  138 (241)
T 1n10_A           91 VHITDDNE--EPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRV  138 (241)
T ss_dssp             EEEEEECS--SCSSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEEC
T ss_pred             EEEeEecC--CCCCCcceecCHHHHHHhhccCcccccccCCEEEEEEEEE
Confidence            99999997  7  3 899999999999998       6899999999997

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A

Probab=99.96  E-value=3.2e-30  Score=196.44  Aligned_cols=97  Identities=24%  Similarity=0.320  Sum_probs=88.1

Q ss_pred             cCceeeEEEEeCCCCCCCCcCCc-cCCCceEEEecccccCCC----CcCCCEEEEEEccCCCCCCCCCCCCCeEEEEEee
Q 032956           21 AYAAQGNAVYYDPPYTKSACYQN-QDHGTMVTGVSDALWDGG----RACGRRYKVQCVRGANTAPHPCHDGASVEVEVVD   95 (130)
Q Consensus        21 a~~~~G~aT~Y~~~~~~gAC~~~-~~~~~~~aAls~~~~~~g----~~CG~c~~v~~~~~~~~~p~~C~~g~sv~v~V~D   95 (130)
                      ...++|+||||++...+|||+.. .+.+.++||+|+.+|++|    +.||+||||+|           . +++|+|+|+|
T Consensus         4 ~~~~~G~aT~Y~~g~~~GACG~~~~~~~~~~aAls~~~f~~G~~~~~~CG~c~~v~~-----------~-~gsv~V~v~D   71 (208)
T 3d30_A            4 DDLHEGYATYTGSGYSGGAFLLDPIPSDMEITAINPADLNYGGVKAALAGSYLEVEG-----------P-KGKTTVYVTD   71 (208)
T ss_dssp             TCCEEEEEEECSTTSSSCTTCCCCCCTTCCEEEECHHHHTGGGCTTTTTTCEEEEEE-----------T-TEEEEEEEEE
T ss_pred             CCcEEEEEEEcCCCCCCCcCCCCCCCCCCEEEEeCHHHhCCCCcCccccCCEEEEEe-----------C-CCcEEEEEEE
Confidence            46789999999997779999543 467899999999999987    89999999998           2 5699999999


Q ss_pred             CCCCCCC-CceEcCHHHHHhhccCCCcEEEEEEEEC
Q 032956           96 YCRQPCN-GVLNLSKDAFAVIADTVAGKVQVEYNPV  130 (130)
Q Consensus        96 ~Cp~~C~-~~lDLS~~AF~~la~~~~G~i~v~w~~V  130 (130)
                      +|| +|+ +|||||+.||++|++++.|+++|+||+|
T Consensus        72 ~CP-~C~~~~~DLS~~aF~~la~~~~G~i~v~~~~V  106 (208)
T 3d30_A           72 LYP-EGARGALDLSPNAFRKIGNMKDGKINIKWRVV  106 (208)
T ss_dssp             ECT-TCCTTCEEECHHHHHHHSCGGGSSEEEEEEEE
T ss_pred             CCC-CCCCCeEECCHHHHHHhcccCCCEEEEEEEEe
Confidence            999 999 9999999999999999999999999997

>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1

Probab=99.92  E-value=1.6e-25  Score=166.12  Aligned_cols=108  Identities=21%  Similarity=0.381  Sum_probs=88.1

Q ss_pred             cCceeeEEEEeCCCCCCCCc-CCc-----c---CCCceEEEecccccCCC------CcCCCEEEEEEccCCCC-CCCCCC
Q 032956           21 AYAAQGNAVYYDPPYTKSAC-YQN-----Q---DHGTMVTGVSDALWDGG------RACGRRYKVQCVRGANT-APHPCH   84 (130)
Q Consensus        21 a~~~~G~aT~Y~~~~~~gAC-~~~-----~---~~~~~~aAls~~~~~~g------~~CG~c~~v~~~~~~~~-~p~~C~   84 (130)
                      ..|..+.||||++. .+||| |+.     .   +.+.++||||+.+|++|      +.||+||||+|...... -+.+|.
T Consensus        12 ~g~~~A~aT~Yg~~-~gGACGyG~~~~~~l~~~gyg~~tAALStaLFn~G~~~w~G~~CG~Cyel~c~~~~c~~cg~~~~   90 (181)
T 1wc2_A           12 NGKSCASTTNYHDS-HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQGGPVR   90 (181)
T ss_dssp             TTEEEEEEEEECCC-BCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSCCCCC
T ss_pred             CCccccceeEecCC-CCcccCcCcCCCCCccccCCcceeeecCHHHhCCCccccccccCCCcEEEEcCCCCcccccccCC
Confidence            34778999999985 69999 772     2   24889999999999997      89999999999653100 013345


Q ss_pred             CCCeEEEEEeeCCCC------CCC--------------CceEcCHHHHHhhccCCCcEEEEEEEEC
Q 032956           85 DGASVEVEVVDYCRQ------PCN--------------GVLNLSKDAFAVIADTVAGKVQVEYNPV  130 (130)
Q Consensus        85 ~g~sv~v~V~D~Cp~------~C~--------------~~lDLS~~AF~~la~~~~G~i~v~w~~V  130 (130)
                      +|++|+|+|||+||.      +|+              .||||+..| .+|+....|+++|+||+|
T Consensus        91 ~g~SI~VtaTN~CPpn~~nggWCn~pp~~~~~n~~G~~~HFDLs~pa-~~Ia~~~~GivpV~yrrV  155 (181)
T 1wc2_A           91 EGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLENGR-SQVTGMGWNNPETTWEVV  155 (181)
T ss_dssp             TTCEEEEEEEEEECSSTTSTTTSCCSSSSSCCCTTSCSEEEEEECTT-STTGGGTCSSEEEEEEEE
T ss_pred             CCCeEEEEEecCCCCCCCCCCccCCCcccCcccccCccccccccchH-HHhhhhcCCCceeEEEEE
Confidence            588999999999993      583              499999999 899999999999999997

>4avr_A PA4485; unknown function, GRAM-negative bacteria, infectious disease structure-based inhibitor design; 1.08A {Pseudomonas aeruginosa PA01}

Probab=99.84  E-value=2.9e-20  Score=125.63  Aligned_cols=90  Identities=19%  Similarity=0.241  Sum_probs=80.7

Q ss_pred             eeeEEEEeCCCC--CCCCcCCccCCCceEEEecccccCCCCcCCCEEEEEEccCCCCCCCCCCCCCeEEEEEeeCCCCCC
Q 032956           24 AQGNAVYYDPPY--TKSACYQNQDHGTMVTGVSDALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPC  101 (130)
Q Consensus        24 ~~G~aT~Y~~~~--~~gAC~~~~~~~~~~aAls~~~~~~g~~CG~c~~v~~~~~~~~~p~~C~~g~sv~v~V~D~Cp~~C  101 (130)
                      ..|.|+||++..  ..+|||..++.+.++||..+      ..||..++||+..         | |++|+|+|+|+|| .|
T Consensus         2 ~~G~ASwYg~~f~G~~TA~Ge~~~~~~~tAAH~t------lP~gt~vrVtNl~---------n-GksVvVrVnDRGP-~~   64 (95)
T 4avr_A            2 DTGEASYYGSRHAGLRTASGERYNPNAMTAAHRT------LPFGARVRVTNLD---------N-RRSVVVRINDRGP-FR   64 (95)
T ss_dssp             EEEEEEECCGGGTTSBCTTSCBCCTTSCEEECSS------SCTTCEEEEEETT---------T-CCEEEEEEEECCC-CS
T ss_pred             CEEEEEEECCccCCCCCCCccCcCCCCCEEEcCC------CCCCcEEEEEECC---------C-CcEEEEEEccCCC-CC
Confidence            479999999853  48999988888999999875      4789999999965         5 9999999999999 88


Q ss_pred             C-CceEcCHHHHHhhccCCCcEEEEEEEEC
Q 032956          102 N-GVLNLSKDAFAVIADTVAGKVQVEYNPV  130 (130)
Q Consensus       102 ~-~~lDLS~~AF~~la~~~~G~i~v~w~~V  130 (130)
                      . ..||||+.||++|+.++.|+.+|+|+.+
T Consensus        65 ~griIDLS~aAa~~Lg~~~~G~~~V~ve~~   94 (95)
T 4avr_A           65 RGRIIDVSRKAAEGLGMIRSGVAPVRIESL   94 (95)
T ss_dssp             TTEEEEECHHHHHHHTCTTTSCEEEEEEEC
T ss_pred             CCCEEEeCHHHHHHhCCcCCCEEEEEEEEe
Confidence            8 8899999999999999999999999975

>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A

Probab=99.83  E-value=4.9e-22  Score=140.31  Aligned_cols=94  Identities=28%  Similarity=0.453  Sum_probs=71.4

Q ss_pred             ceeeEEEE--eCCC-------C--CCCCcCCccCCCceEEEeccccc---------CCCCcCCCEEEEEEccCCCCCCCC
Q 032956           23 AAQGNAVY--YDPP-------Y--TKSACYQNQDHGTMVTGVSDALW---------DGGRACGRRYKVQCVRGANTAPHP   82 (130)
Q Consensus        23 ~~~G~aT~--Y~~~-------~--~~gAC~~~~~~~~~~aAls~~~~---------~~g~~CG~c~~v~~~~~~~~~p~~   82 (130)
                      +..-+|||  |.+.       .  ..++|+... .+...++++...|         ++++.||+|++|++..        
T Consensus         3 ~~~~~~ty~~y~~~~~~~~~~~~~~s~~C~t~d-a~~~~~~~~~y~wtA~~g~~gp~~g~~CG~cv~Vtn~~--------   73 (125)
T 1bw3_A            3 ANDVRATYHYYRPAQNNWDLGAPAVSAYCATWD-ASKPLSWRSKYGWTAFCGPAGPRGQAACGKCLRVTNPA--------   73 (125)
T ss_dssp             EEEEEEECCCSSCGGGTTCTTSTTTCCTTHHHH-TTSCHHHHHHSCCEESCSTTCCCSGGGTTCEEEEEETT--------
T ss_pred             ccceEEEEEEecCCCcCcccccceeeEeeeccc-CCCceeEecCCCceEeccCCCCCCCcccCCEEEeEeCC--------
Confidence            34557885  5551       1  358885432 2333455555555         6788999999999853        


Q ss_pred             CCCCCeEEEEEeeCCCCCCCCceEcC-HHHHHhhcc----CCCcEEEEEEEEC
Q 032956           83 CHDGASVEVEVVDYCRQPCNGVLNLS-KDAFAVIAD----TVAGKVQVEYNPV  130 (130)
Q Consensus        83 C~~g~sv~v~V~D~Cp~~C~~~lDLS-~~AF~~la~----~~~G~i~v~w~~V  130 (130)
                       + |++|+|+|+|+|| .|  +|||| ++||++|++    ++.|+++|+|++|
T Consensus        74 -n-GksV~V~VvD~CP-~g--gLDLS~~~AF~~Ia~~g~G~~~G~i~V~w~~V  121 (125)
T 1bw3_A           74 -T-GAQITARIVDQCA-NG--GLDLDWDTVFTKIDTNGIGYQQGHLNVNYQFV  121 (125)
T ss_dssp             -T-TEEEEEEEEECCS-SS--SCCSCSSSSHHHHCSSCHHHHHSEEEEEEEEE
T ss_pred             -C-CCEEEEEEEEeCC-CC--CCCCCCHHHHHHHhccCCcccCcEEEEEEEEE
Confidence             4 8999999999999 66  59999 999999998    7899999999986

>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}

Probab=98.67  E-value=9.2e-08  Score=67.41  Aligned_cols=65  Identities=38%  Similarity=0.614  Sum_probs=55.1

Q ss_pred             EEEec-ccccCCCCcCCCEEEEEEccCCCCCCCCCCCCCeEEEEEeeCCCCCCCCceEcCHHHHHhhcc-CCCcEE-EEE
Q 032956           50 VTGVS-DALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIAD-TVAGKV-QVE  126 (130)
Q Consensus        50 ~aAls-~~~~~~g~~CG~c~~v~~~~~~~~~p~~C~~g~sv~v~V~D~Cp~~C~~~lDLS~~AF~~la~-~~~G~i-~v~  126 (130)
                      +.+.. -..|+ .+.||+|+||++.          + |++|.+..+|.=+    +.|+++++||+.|.+ ...|+| +++
T Consensus        52 IGga~~iagWN-S~~CGtC~~lty~----------n-g~sI~vlaID~A~----~gFnIs~~Amn~LT~G~~lG~V~~a~  115 (129)
T 2kqa_A           52 VGGIPDIAGWD-SPSCGTCWKVTIP----------N-GNSIFIRGVDSGR----GGFNVNPTAFTKLVGSTEAGRVDNVN  115 (129)
T ss_dssp             EEEETTCCSTT-CTTCSCEEEEEET----------T-TEEEEEEEEEECS----SSEEECHHHHHHHHSSSSSCCBCSCE
T ss_pred             eccchhhccCC-CCCCCceEEEEEc----------C-CCEEEEEEEccCC----CceeehHHHHHHhcCCcccCcEeEEE
Confidence            44433 44577 6999999999983          3 8999999999988    589999999999975 789999 999


Q ss_pred             EEEC
Q 032956          127 YNPV  130 (130)
Q Consensus       127 w~~V  130 (130)
                      |++|
T Consensus       116 ~~qV  119 (129)
T 2kqa_A          116 YVQV  119 (129)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            9987

>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}

Probab=98.63  E-value=3.3e-08  Score=69.03  Aligned_cols=65  Identities=26%  Similarity=0.483  Sum_probs=53.0

Q ss_pred             eEEEecc-cccCCCCcCCCEEEEEEccCCCCCCCCCCCCCeEEEEEeeCCCCCCCCceEcCHHHHHhhcc---CCCcEEE
Q 032956           49 MVTGVSD-ALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIAD---TVAGKVQ  124 (130)
Q Consensus        49 ~~aAls~-~~~~~g~~CG~c~~v~~~~~~~~~p~~C~~g~sv~v~V~D~Cp~~C~~~lDLS~~AF~~la~---~~~G~i~  124 (130)
                      .+.+... .-|+ .+.||.|+||++           + |++|.|..+|.=+    +.|+++.+||+.|.+   ...|+|+
T Consensus        45 ~IGg~~~i~gwn-s~~CGtC~~lty-----------~-g~si~vlaID~a~----~Gfnis~~A~n~LT~G~a~~lG~V~  107 (120)
T 3m3g_A           45 YIGGAAAVAGWN-SASCGTCWKLQY-----------S-GHTIYVLAVDHAA----SGFNIALDAMNALTGGQAVQLGRVS  107 (120)
T ss_dssp             SEEEETTCCSTT-CTTTTCEEEEEE-----------T-TEEEEEEEEEECS----SSEEECHHHHHHHHTSCHHHHCEEE
T ss_pred             ccccccccccCC-CCCCCceEEEEE-----------C-CeEEEEEEEecCC----CceeecHHHHHHhhCCcceeeeeEe
Confidence            3444432 4465 489999999998           4 8999999999888    579999999999974   2469999


Q ss_pred             EEEEEC
Q 032956          125 VEYNPV  130 (130)
Q Consensus       125 v~w~~V  130 (130)
                      ++|++|
T Consensus       108 a~~~~V  113 (120)
T 3m3g_A          108 ATATQV  113 (120)
T ss_dssp             CEEEEE
T ss_pred             EEEEEc
Confidence            999986

>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}

Probab=98.61  E-value=5.6e-08  Score=68.04  Aligned_cols=68  Identities=22%  Similarity=0.431  Sum_probs=54.9

Q ss_pred             ceEEEecc-cccCCCCcCCCEEEEEEccCCCCCCCCCCCCCeEEEEEeeCCCCCCCCceEcCHHHHHhhccC---CCcEE
Q 032956           48 TMVTGVSD-ALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIADT---VAGKV  123 (130)
Q Consensus        48 ~~~aAls~-~~~~~g~~CG~c~~v~~~~~~~~~p~~C~~g~sv~v~V~D~Cp~~C~~~lDLS~~AF~~la~~---~~G~i  123 (130)
                      .|+.+... ..|++ +.||.|+||++..         + |++|.+..+|.=+    ..|+++.+||+.|.+-   ..|+|
T Consensus        44 ~FIGg~~~V~gwnS-~~CGtC~~lty~~---------~-g~si~vlaID~a~----~Gfnis~~Amn~LT~G~a~~lG~V  108 (122)
T 3sul_A           44 SYVGAVDTITGWNS-ESCGTCYQITWSG---------T-GKTIHVVGVDVAG----NGFNVGQRAMDDLTNGQAVALGNI  108 (122)
T ss_dssp             SEEEEETTCCSTTC-TTTTCEEEEEETT---------T-TEEEEEEEEEECS----SSEEECHHHHHHHHTSCHHHHSEE
T ss_pred             cccccccccccCCC-CCCCceEEEEEcC---------C-CcEEEEEEEecCC----CceeehHHHHHHhcCCcceecceE
Confidence            33555443 55766 9999999999942         2 8999999999888    5799999999999842   46999


Q ss_pred             EEEEEEC
Q 032956          124 QVEYNPV  130 (130)
Q Consensus       124 ~v~w~~V  130 (130)
                      +++|++|
T Consensus       109 ~a~~~qV  115 (122)
T 3sul_A          109 DVTATLV  115 (122)
T ss_dssp             EEEEEEE
T ss_pred             eEEEEEc
Confidence            9999986

>3suk_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}

Probab=98.58  E-value=4.9e-08  Score=68.61  Aligned_cols=70  Identities=19%  Similarity=0.347  Sum_probs=53.9

Q ss_pred             ceEEEecc-cccCCCCcCCCEEEEEEccCCCCCCCCCCCCCeEEEEEeeCCCCCCCCceEcCHHHHHhhcc---CCCcEE
Q 032956           48 TMVTGVSD-ALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIAD---TVAGKV  123 (130)
Q Consensus        48 ~~~aAls~-~~~~~g~~CG~c~~v~~~~~~~~~p~~C~~g~sv~v~V~D~Cp~~C~~~lDLS~~AF~~la~---~~~G~i  123 (130)
                      -.+.+... .-|++ +.||.|+||++..++       . .++|.|..+|.=+    ..|+++.+||+.|.+   ...|+|
T Consensus        45 P~IGg~~~i~gwnS-~~CGtC~~lty~g~~-------~-~~si~vlaID~a~----~Gfnis~~Amn~LT~G~a~~lG~V  111 (125)
T 3suk_A           45 PHIGASSDIGGFNS-PACGNCYTISFTFQG-------V-TRSINLVAIDHAG----NGFNVAQAAMDELTNGNAVALGTI  111 (125)
T ss_dssp             TSEEEETTCCSTTC-TTTTCEEEEEEEETT-------E-EEEEEEEEEEECS----SSEEECHHHHHHHHTSCHHHHCEE
T ss_pred             CeeccccccccCCC-CCCCeeEEEEEcCCC-------c-ceEEEEEEEecCC----CceeecHHHHHHhcCCcccccceE
Confidence            33444443 44754 899999999994311       1 3899999999888    579999999999985   246999


Q ss_pred             EEEEEEC
Q 032956          124 QVEYNPV  130 (130)
Q Consensus       124 ~v~w~~V  130 (130)
                      +++|++|
T Consensus       112 ~~~~~~V  118 (125)
T 3suk_A          112 DVQSQQV  118 (125)
T ss_dssp             EEEEEEE
T ss_pred             eEEEEEc
Confidence            9999986

>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}

Probab=98.56  E-value=1.2e-07  Score=66.71  Aligned_cols=70  Identities=21%  Similarity=0.310  Sum_probs=53.2

Q ss_pred             eEEEec-ccccCCCCcCCCEEEEEEccCCCCCCCCCCCCCeEEEEEeeCCCCCCCCceEcCHHHHHhhccC---CCcEEE
Q 032956           49 MVTGVS-DALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGVLNLSKDAFAVIADT---VAGKVQ  124 (130)
Q Consensus        49 ~~aAls-~~~~~~g~~CG~c~~v~~~~~~~~~p~~C~~g~sv~v~V~D~Cp~~C~~~lDLS~~AF~~la~~---~~G~i~  124 (130)
                      .+.+.. -.-|+ .+.||.|+||++..+.       ...++|.|..+|.=+    ..|+++.+||+.|.+-   ..|+|+
T Consensus        45 ~IGg~~~i~gwn-s~~CGtC~~lty~g~~-------~~~~si~vlaID~a~----~Gfnis~~Amn~LT~g~a~~lG~V~  112 (127)
T 3suj_A           45 CIGGSSDIAGYN-SPNCGSCYQLTYSSAH-------TTPKSIYMVAIDRSA----EGFTASKQAMDDLTNKRAEELGTVN  112 (127)
T ss_dssp             SEEEETTCCSTT-CTTTTCEEEEEECCSS-------SCCEEEEEEEEEECS----SSEEECHHHHHHHHTSCHHHHSSEE
T ss_pred             eeccccccccCC-CCCCCceEEEEECCCC-------CcceEEEEEEEecCC----CceeecHHHHHHhcCCccccceeEE
Confidence            344433 34465 4899999999994311       013899999999888    5799999999999842   468999


Q ss_pred             EEEEEC
Q 032956          125 VEYNPV  130 (130)
Q Consensus       125 v~w~~V  130 (130)
                      ++|++|
T Consensus       113 ~~~~~V  118 (127)
T 3suj_A          113 VDVRKV  118 (127)
T ss_dssp             EEEEEE
T ss_pred             EEEEEe
Confidence            999986

>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}

Probab=98.47  E-value=5.5e-07  Score=63.86  Aligned_cols=62  Identities=19%  Similarity=0.211  Sum_probs=51.6

Q ss_pred             eEEEecccccCCCCcCCCEEEEEEccCCCCCCCCCCCCCeEEEEEeeCCCCCCCCc--eEcCHHHHHhhccC-------C
Q 032956           49 MVTGVSDALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGV--LNLSKDAFAVIADT-------V  119 (130)
Q Consensus        49 ~~aAls~~~~~~g~~CG~c~~v~~~~~~~~~p~~C~~g~sv~v~V~D~Cp~~C~~~--lDLS~~AF~~la~~-------~  119 (130)
                      .+.+..   | |...||.|+||++           + |++|.|..+|.=.    +.  ||+|.+||+.|.+-       +
T Consensus        49 ~igg~~---w-ns~~CGtCwkLtY-----------~-G~sI~vlaID~a~----~g~~FnIs~~Amn~LT~G~~a~~a~e  108 (136)
T 3sum_A           49 HFVAAP---E-AQTECGSCWKLRY-----------K-GNHAFVTVVDRVE----EANLFVGGTDLVKNLTTFNGAPEGYD  108 (136)
T ss_dssp             SEEECC---B-TTBCTTCEEEEEE-----------T-TEEEEEEEEECCC----STTEEEECHHHHHHHTCBTTBCHHHH
T ss_pred             cccccc---c-CCCCCCceEEEEE-----------C-CeEEEEEEEecCC----CcceEeehHHHHHHHhCCCcccccee
Confidence            455544   5 4589999999998           4 8999999999887    46  99999999999742       3


Q ss_pred             CcEEEE-EEEEC
Q 032956          120 AGKVQV-EYNPV  130 (130)
Q Consensus       120 ~G~i~v-~w~~V  130 (130)
                      .|+|++ +|++|
T Consensus       109 lG~Vda~~~~qV  120 (136)
T 3sum_A          109 WGTAQLFSAYQV  120 (136)
T ss_dssp             HSEEECSEEEEE
T ss_pred             cceeeeeEEEEc
Confidence            699999 99986

>2eng_A Endoglucanase V; cellulose degradation, hydrolase (endoglucanase), glycosidase; 1.50A {Humicola insolens} SCOP: b.52.1.1 PDB: 3eng_A* 4eng_A* 1hd5_A 1oa7_A* 1oa9_A 1l8f_A

Probab=95.71  E-value=0.0083  Score=45.15  Aligned_cols=40  Identities=15%  Similarity=0.229  Sum_probs=29.3

Q ss_pred             CcCCCEEEEEEccCCCCCCCCCCCCCeEEEEEeeCCCCCCC-CceEcCH
Q 032956           62 RACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCN-GVLNLSK  109 (130)
Q Consensus        62 ~~CG~c~~v~~~~~~~~~p~~C~~g~sv~v~V~D~Cp~~C~-~~lDLS~  109 (130)
                      ..|++||+++-+++.      .. ||+.+|+|++... .=. +||||.-
T Consensus        84 ~~Cc~C~~LtFt~~~------~~-GKkmiVQ~TNtG~-Dl~~n~FDl~i  124 (210)
T 2eng_A           84 GWCCACYELTFTSGP------VA-GKKMVVQSTSTGG-DLGSNHFDLNI  124 (210)
T ss_dssp             HHTTCEEEEEECSGG------GT-TCEEEEEEEEC------CCEEEEEC
T ss_pred             cccceeEEEEEcCCC------cC-CCEEEEEEecccC-CCCCCceeEec
Confidence            579999999997642      23 9999999999997 444 9999863

>3nrl_A Uncharacterized protein rumgna_01417; beta protein, structural genomics, PSI-2, protein structure initiative; 1.90A {Ruminococcus gnavus}

Probab=81.81  E-value=3.2  Score=26.53  Aligned_cols=28  Identities=25%  Similarity=0.471  Sum_probs=20.5

Q ss_pred             cccccCCCCcCCCEEEEEEccCCCCCCCCCCCCCeEEEEE
Q 032956           54 SDALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVEVEV   93 (130)
Q Consensus        54 s~~~~~~g~~CG~c~~v~~~~~~~~~p~~C~~g~sv~v~V   93 (130)
                      +...|..|..||.|++|.-           + ++.+-++|
T Consensus        23 ~~~~~ygGlHCGE~feV~v-----------~-~~WiptRi   50 (81)
T 3nrl_A           23 DLESFYGGLHCGECFDVKV-----------K-DVWVPVRI   50 (81)
T ss_dssp             ETTEECCCCCTTCEEEEEE-----------T-TEEEEEEE
T ss_pred             ccccccCCcccccEEEEEE-----------C-CEEEEEEE
Confidence            3444567899999999986           2 66776665

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	130
d1n10a2	143	b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-t	2e-12
d1wc2a1	180	b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mu	4e-09

>d1n10a2 b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]} Length = 143

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Pollen allergen PHL P 1 N-terminal domain
domain: Pollen allergen PHL P 1 N-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

 Score = 58.1 bits (140), Expect = 2e-12
 Identities = 29/134 (21%), Positives = 53/134 (39%), Gaps = 27/134 (20%)

Query: 18  ISTAYAAQ---GNAVYYDPPYTKS------AC-YQNQDH---GTMVTGVSDALWDGGRAC 64
           I+  Y  +     + +Y  P          AC Y++ D      M    +  ++  GR C
Sbjct: 9   ITATYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGC 68

Query: 65  GRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGV-LNLSKDAFAVIAD------ 117
           G  ++++C +     P  C  G  V V + D   +P      +LS  AF  +A       
Sbjct: 69  GSCFEIKCTK-----PEACS-GEPVVVHITDDNEEPIAPYHFDLSGHAFGAMAKKGDEQK 122

Query: 118 -TVAGKVQVEYNPV 130
              AG++++++  V
Sbjct: 123 LRSAGELELQFRRV 136

>d1wc2a1 b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mussel (Mytilus edulis) [TaxId: 6550]} Length = 180

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase (CMCase)
species: Blue mussel (Mytilus edulis) [TaxId: 6550]

 Score = 50.0 bits (119), Expect = 4e-09
 Identities = 17/137 (12%), Positives = 34/137 (24%), Gaps = 34/137 (24%)

Query: 28  AVYYDPPYTKSACYQN--------QDHGTMVTGVSDALWDG------GRACGRRYKVQCV 73
              Y   +  +              + G+ V   S   +D       G+ CG+  K+   
Sbjct: 19  TTNYHDSHKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTT 78

Query: 74  RGAN-TAPHPCHDGASVEVEVVDYC------RQPCNGVLNLSK-------------DAFA 113
            G       P  +G S    + + C      +  CN                    +  +
Sbjct: 79  GGYVPGQGGPVREGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLENGRS 138

Query: 114 VIADTVAGKVQVEYNPV 130
            +        +  +  V
Sbjct: 139 QVTGMGWNNPETTWEVV 155

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	130
d1n10a2	143	Pollen allergen PHL P 1 N-terminal domain {Timothy	99.97
d1wc2a1	180	Endoglucanase (CMCase) {Blue mussel (Mytilus eduli	99.94
d1bw3a_	125	Barwin {Barley (Hordeum vulgare) [TaxId: 4513]}	99.03
d2enga_	210	Endoglucanase V (Eng V) {Humicola insolens [TaxId:	95.45

>d1n10a2 b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Pollen allergen PHL P 1 N-terminal domain
domain: Pollen allergen PHL P 1 N-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=99.97  E-value=2.4e-32  Score=196.00  Aligned_cols=104  Identities=25%  Similarity=0.576  Sum_probs=89.3

Q ss_pred             cCceeeEEEEeCCCCC------CCCc-CCcc---CCCceEEEecccccCCCCcCCCEEEEEEccCCCCCCCCCCCCCeEE
Q 032956           21 AYAAQGNAVYYDPPYT------KSAC-YQNQ---DHGTMVTGVSDALWDGGRACGRRYKVQCVRGANTAPHPCHDGASVE   90 (130)
Q Consensus        21 a~~~~G~aT~Y~~~~~------~gAC-~~~~---~~~~~~aAls~~~~~~g~~CG~c~~v~~~~~~~~~p~~C~~g~sv~   90 (130)
                      .+|.+|+||||+++++      .||| |+++   +.+.++||+|+.+|++|..||+||||+|..     +++|. +++|+
T Consensus        15 ~~w~~g~AT~Yg~~~~~~~~~~gGACGyg~~~~~p~g~~~aAls~~l~~~g~~CG~cyev~c~~-----~~~c~-~~sv~   88 (143)
T d1n10a2          15 DKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTK-----PEACS-GEPVV   88 (143)
T ss_dssp             CSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECS-----STTBC-SCCEE
T ss_pred             CCcEeeEEeEeCCCCCCCCCCCcccCCCCCcccCCCcceEEEeCHhHccCCCcCCcceEeEcCC-----CCccc-CCCEE
Confidence            4799999999986543      6999 7654   568999999999999999999999999965     56888 99999


Q ss_pred             EEEeeCCCCCCC-CceEcCHHHHHhhccC-------CCcEEEEEEEEC
Q 032956           91 VEVVDYCRQPCN-GVLNLSKDAFAVIADT-------VAGKVQVEYNPV  130 (130)
Q Consensus        91 v~V~D~Cp~~C~-~~lDLS~~AF~~la~~-------~~G~i~v~w~~V  130 (130)
                      |+|||.||..|. +|||||+.||++|++.       +.|+|+|+||+|
T Consensus        89 V~vtd~c~~~~~~~hfDLS~~AF~~iA~~~~~~~~~~~Giv~V~yRrV  136 (143)
T d1n10a2          89 VHITDDNEEPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRV  136 (143)
T ss_dssp             EEEEEECSSCSSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEEC
T ss_pred             EEEEecccCCCCCccccCCHHHHhhhccccchhhheecCccceEEEEE
Confidence            999999994445 8999999999999975       579999999998

>d1wc2a1 b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mussel (Mytilus edulis) [TaxId: 6550]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase (CMCase)
species: Blue mussel (Mytilus edulis) [TaxId: 6550]

Probab=99.94  E-value=7e-28  Score=177.71  Aligned_cols=108  Identities=21%  Similarity=0.399  Sum_probs=88.5

Q ss_pred             cCceeeEEEEeCCCCCCCCc-CCcc----C----CCceEEEecccccCC------CCcCCCEEEEEEccCCCC-CCCCCC
Q 032956           21 AYAAQGNAVYYDPPYTKSAC-YQNQ----D----HGTMVTGVSDALWDG------GRACGRRYKVQCVRGANT-APHPCH   84 (130)
Q Consensus        21 a~~~~G~aT~Y~~~~~~gAC-~~~~----~----~~~~~aAls~~~~~~------g~~CG~c~~v~~~~~~~~-~p~~C~   84 (130)
                      .-|+.+++|||+.+ ..||| |++.    +    .+.++||+|+.+|++      |+.||+||||+|+..... .+..|.
T Consensus        12 ~g~~~A~aT~Ygd~-~~GACGyG~~~~~~~~~~g~G~~tAAlS~~lf~~~~~~~~G~~CG~CyeV~C~~~~~~~~~~~~~   90 (180)
T d1wc2a1          12 NGKSCASTTNYHDS-HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQGGPVR   90 (180)
T ss_dssp             TTEEEEEEEEECCC-BCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSCCCCC
T ss_pred             CCccccceEEeCCC-CCCCCCCCcCCCCCccccCCcceEeeccHHHhcCCcccccccccCCEEEEEECCCCCCccCCCCC
Confidence            46789999999985 58999 7764    1    358999999999999      899999999999864321 122334


Q ss_pred             CCCeEEEEEeeCCCC------CCC-C-------------ceEcCHHHHHhhccCCCcEEEEEEEEC
Q 032956           85 DGASVEVEVVDYCRQ------PCN-G-------------VLNLSKDAFAVIADTVAGKVQVEYNPV  130 (130)
Q Consensus        85 ~g~sv~v~V~D~Cp~------~C~-~-------------~lDLS~~AF~~la~~~~G~i~v~w~~V  130 (130)
                      ++++|+|+|||+||.      +|+ .             ||||+ ++|.+|+....|+|+|+||+|
T Consensus        91 ~g~sV~V~iTd~CP~n~~n~gWCn~p~~~~~~n~~g~~~HFDLs-~af~~ia~~~~G~v~V~yrrV  155 (180)
T d1wc2a1          91 EGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLE-NGRSQVTGMGWNNPETTWEVV  155 (180)
T ss_dssp             TTCEEEEEEEEEECSSTTSTTTSCCSSSSSCCCTTSCSEEEEEE-CTTSTTGGGTCSSEEEEEEEE
T ss_pred             CCCcEEEEEEecCCCCCCCCCccCCccccccccccCcccceech-HHHHHHhhhcCCcceeEEEEe
Confidence            478999999999994      464 2             99998 599999999999999999997

>d1bw3a_ b.52.1.2 (A:) Barwin {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Barwin
domain: Barwin
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=99.03  E-value=4.5e-11  Score=80.78  Aligned_cols=57  Identities=33%  Similarity=0.589  Sum_probs=48.7

Q ss_pred             CCcCCCEEEEEEccCCCCCCCCCCCCCeEEEEEeeCCCCCCCCceEcC-HHHHHhhcc----CCCcEEEEEEEEC
Q 032956           61 GRACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCNGVLNLS-KDAFAVIAD----TVAGKVQVEYNPV  130 (130)
Q Consensus        61 g~~CG~c~~v~~~~~~~~~p~~C~~g~sv~v~V~D~Cp~~C~~~lDLS-~~AF~~la~----~~~G~i~v~w~~V  130 (130)
                      -..||+|++||+..         + |.+++++|||+|.   ++.|||. +..|++|-.    ...|.+.|+|++|
T Consensus        60 q~sCGkclrvTN~a---------t-ga~~~~RiVDqCs---ngGlDLD~~~vFn~iDtdG~G~~~Ghl~V~y~fV  121 (125)
T d1bw3a_          60 QAACGKCLRVTNPA---------T-GAQITARIVDQCA---NGGLDLDWDTVFTKIDTNGIGYQQGHLNVNYQFV  121 (125)
T ss_dssp             GGGTTCEEEEEETT---------T-TEEEEEEEEECCS---SSSCCSCSSSSHHHHCSSCHHHHHSEEEEEEEEE
T ss_pred             cccccceEEeeecc---------c-CcEEEEEEeeccc---CCCCccccHhhhheecCCCcccccccEEEEEEEe
Confidence            46899999999864         4 8999999999888   3789999 789999953    4578999999987

>d2enga_ b.52.1.1 (A:) Endoglucanase V (Eng V) {Humicola insolens [TaxId: 34413]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase V (Eng V)
species: Humicola insolens [TaxId: 34413]

Probab=95.45  E-value=0.0056  Score=44.25  Aligned_cols=40  Identities=15%  Similarity=0.217  Sum_probs=29.1

Q ss_pred             CcCCCEEEEEEccCCCCCCCCCCCCCeEEEEEeeCCCCCCC-CceEcCH
Q 032956           62 RACGRRYKVQCVRGANTAPHPCHDGASVEVEVVDYCRQPCN-GVLNLSK  109 (130)
Q Consensus        62 ~~CG~c~~v~~~~~~~~~p~~C~~g~sv~v~V~D~Cp~~C~-~~lDLS~  109 (130)
                      ..|.+|||++-+++.       -.||+.+|+|++.-- .=. +||||..
T Consensus        84 ~~Cc~Cy~LtFTs~~-------~~GKkMiVQ~tNTGg-Dlg~n~FDl~i  124 (210)
T d2enga_          84 GWCCACYELTFTSGP-------VAGKKMVVQSTSTGG-DLGSNHFDLNI  124 (210)
T ss_dssp             HHTTCEEEEEECSGG-------GTTCEEEEEEEEC------CCEEEEEC
T ss_pred             ccccccEEEEeecCC-------cCCCEEEEEEeccCC-ccCCCeeeEec
Confidence            569999999998643       139999999999876 444 8999863